Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:05:26 (3019694): wrapper (7.7.26015): starting
06:05:26 (3019694): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 06:05:26] Arguments: --nthreads 4
[2024-04-27 06:05:26] Threads: 4
[2024-04-27 06:05:26] Checking for CVMFS
[2024-04-27 06:05:26] No cvmfs_config command found, will try listing directly
[2024-04-27 06:05:26] CVMFS is ok
[2024-04-27 06:05:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 06:05:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 06:05:26] Further information can be found at the LHC@home message board.
[2024-04-27 06:05:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 06:05:26] Checking for apptainer binary...
[2024-04-27 06:05:26] which: no apptainer in ((null))
[2024-04-27 06:05:26] apptainer is not installed, using version from CVMFS
[2024-04-27 06:05:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 06:05:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-04-27 06:05:27] apptainer works
[2024-04-27 06:05:27] Set ATHENA_PROC_NUMBER=4
[2024-04-27 06:05:27] Set ATHENA_CORE_NUMBER=4
[2024-04-27 06:05:27] Starting ATLAS job with PandaID=6186189376
[2024-04-27 06:05:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 08:40:13]  *** The last 200 lines of the pilot log: ***
[2024-04-27 08:40:13]  filesize=297641
[2024-04-27 08:40:13]  filetype=log
[2024-04-27 08:40:13]  guid=f70b6848-83c8-49f4-b6d1-ed3675647041
[2024-04-27 08:40:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 08:40:13]  is_tar=False
[2024-04-27 08:40:13]  lfn=log.38204311._004730.job.log.tgz.1
[2024-04-27 08:40:13]  mtime=0
[2024-04-27 08:40:13]  protocol_id=None
[2024-04-27 08:40:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 08:40:13]  replicas=None
[2024-04-27 08:40:13]  scope=mc23_13p6TeV
[2024-04-27 08:40:13]  status=None
[2024-04-27 08:40:13]  status_code=0
[2024-04-27 08:40:13]  storage_token=
[2024-04-27 08:40:13]  surl=/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6186189376/log.38204311._004730.job.log.tgz.1
[2024-04-27 08:40:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/e3/log.38204311._004730.job.log.tgz.1
[2024-04-27 08:40:13]  workdir=None
[2024-04-27 08:40:13] ]
[2024-04-27 08:40:13] 2024-04-27 06:39:42,437 | INFO     | transferring file log.38204311._004730.job.log.tgz.1 from /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6186189376/log.38204311._004730.job.log.tgz.1 to /scratch/b
[2024-04-27 08:40:13] 2024-04-27 06:39:42,438 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6186189376/log.38204311._004730.job.log.tgz.1 /scratch/boinc/var/slot76/slots/0/lo
[2024-04-27 08:40:13] 2024-04-27 06:39:42,465 | INFO     | adding to output.list: log.38204311._004730.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/e3/log.38204311._004730.job.log.tg
[2024-04-27 08:40:13] 2024-04-27 06:39:42,465 | INFO     | summary of transferred files:
[2024-04-27 08:40:13] 2024-04-27 06:39:42,465 | INFO     |  -- lfn=log.38204311._004730.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 08:40:13] 2024-04-27 06:39:42,466 | INFO     | stage-out finished correctly
[2024-04-27 08:40:13] 2024-04-27 06:39:44,684 | INFO     | monitor loop #702: job 0:6186189376 is in state 'finished'
[2024-04-27 08:40:13] 2024-04-27 06:39:44,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 08:40:13] 2024-04-27 06:39:45,702 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 08:40:13] 2024-04-27 06:39:46,147 | INFO     | job 6186189376 has state=finished
[2024-04-27 08:40:13] 2024-04-27 06:39:46,147 | INFO     | preparing for final server update for job 6186189376 in state='finished'
[2024-04-27 08:40:13] 2024-04-27 06:39:46,148 | INFO     | this job has now completed (state=finished)
[2024-04-27 08:40:13] 2024-04-27 06:39:46,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 08:40:13] 2024-04-27 06:39:46,148 | INFO     | job 6186189376 has finished - writing final server update
[2024-04-27 08:40:13] 2024-04-27 06:39:46,148 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3262736/.job.ad'
[2024-04-27 08:40:13] 2024-04-27 06:39:46,148 | INFO     | total number of processed events: 400 (read)
[2024-04-27 08:40:13] 2024-04-27 06:39:46,155 | INFO     | executing command: lscpu
[2024-04-27 08:40:13] 2024-04-27 06:39:46,206 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-27 08:40:13] 2024-04-27 06:39:46,207 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 08:40:13] 2024-04-27 06:39:46,251 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 08:40:13] 2024-04-27 06:39:47,187 | INFO     | monitor loop #703: job 0:6186189376 is in state 'finished'
[2024-04-27 08:40:13] 2024-04-27 06:39:47,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 08:40:13] 2024-04-27 06:39:49,695 | INFO     | monitor loop #704: job 0:6186189376 is in state 'finished'
[2024-04-27 08:40:13] 2024-04-27 06:39:49,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,469 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 08:40:13] 2024-04-27 06:39:50,469 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6186189376/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,470 | INFO     | extracted standard info from prmon json
[2024-04-27 08:40:13] 2024-04-27 06:39:50,471 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 08:40:13] 2024-04-27 06:39:50,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 08:40:13] 2024-04-27 06:39:50,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 08:40:13] 2024-04-27 06:39:50,474 | INFO     | fitting pss+swap vs Time
[2024-04-27 08:40:13] 2024-04-27 06:39:50,476 | INFO     | current chi2=4.13777390529331 (change=0.12225050619346806 %)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,476 | INFO     | right removable region: 145
[2024-04-27 08:40:13] 2024-04-27 06:39:50,477 | INFO     | current chi2=1.6008794677686793 (change=61.35790835573835 %)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,477 | INFO     | current chi2=0.045465778170553146 (change=97.15994994714225 %)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,478 | INFO     | current chi2=0.0006477702972748021 (change=98.57525742802673 %)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,479 | INFO     | current chi2=0.00027308318992694074 (change=57.84258847992666 %)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,480 | INFO     | current chi2=0.00018272625177907732 (change=33.087696892671076 %)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,481 | INFO     | current chi2=0.00015669582622547981 (change=14.24558611592889 %)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,481 | INFO     | left removable region: 60
[2024-04-27 08:40:13] 2024-04-27 06:39:50,481 | INFO     | current memory leak: 1.82 B/s (using 85 data points, chi2=0.00)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | ..............................
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | . Timing measurements:
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | . get job = 0 s
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | . initial setup = 1 s
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | . payload setup = 6 s
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | . stage-in = 0 s
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | . payload execution = 9215 s
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | . stage-out = 0 s
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | . log creation = 0 s
[2024-04-27 08:40:13] 2024-04-27 06:39:50,482 | INFO     | ..............................
[2024-04-27 08:40:13] 2024-04-27 06:39:50,955 | INFO     | 
[2024-04-27 08:40:13] 2024-04-27 06:39:50,955 | INFO     | job summary report
[2024-04-27 08:40:13] 2024-04-27 06:39:50,955 | INFO     | --------------------------------------------------
[2024-04-27 08:40:13] 2024-04-27 06:39:50,955 | INFO     | PanDA job id: 6186189376
[2024-04-27 08:40:13] 2024-04-27 06:39:50,955 | INFO     | task id: 38204311
[2024-04-27 08:40:13] 2024-04-27 06:39:50,955 | INFO     | errors: (none)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,955 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | pilot state: finished 
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | transexitcode: 0
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | exeerrorcode: 0
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | exeerrordiag: 
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | exitcode: 0
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | exitmsg: OK
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | cpuconsumptiontime: 34315 s
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | nevents: 400
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | neventsw: 0
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | pid: 3033384
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | pgrp: 3033384
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | corecount: 4
[2024-04-27 08:40:13] 2024-04-27 06:39:50,956 | INFO     | event service: False
[2024-04-27 08:40:13] 2024-04-27 06:39:50,957 | INFO     | sizes: {0: 2375496, 1: 2375695, 6: 2375901, 11: 2375929, 9225: 2404208, 9226: 2413190, 9230: 2413374, 9235: 2413544}
[2024-04-27 08:40:13] 2024-04-27 06:39:50,957 | INFO     | --------------------------------------------------
[2024-04-27 08:40:13] 2024-04-27 06:39:50,957 | INFO     | 
[2024-04-27 08:40:13] 2024-04-27 06:39:50,957 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2024-04-27 08:40:13] 2024-04-27 06:39:50,980 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,981 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | job 6186189376 has completed (purged errors)
[2024-04-27 08:40:13] 2024-04-27 06:39:50,982 | INFO     | overall cleanup function is called
[2024-04-27 08:40:13] 2024-04-27 06:39:51,990 | INFO     | --- collectZombieJob: --- 10, [3033384]
[2024-04-27 08:40:13] 2024-04-27 06:39:51,990 | INFO     | zombie collector waiting for pid 3033384
[2024-04-27 08:40:13] 2024-04-27 06:39:51,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 08:40:13] 2024-04-27 06:39:52,995 | INFO     | collected zombie processes
[2024-04-27 08:40:13] 2024-04-27 06:39:52,996 | INFO     | will now attempt to kill all subprocesses of pid=3033384
[2024-04-27 08:40:13] 2024-04-27 06:39:53,253 | INFO     | process IDs to be killed: [3033384] (in reverse order)
[2024-04-27 08:40:13] 2024-04-27 06:39:53,457 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 08:40:13] 2024-04-27 06:39:53,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 08:40:13] 2024-04-27 06:39:53,469 | INFO     | did not find any defunct processes belonging to 3033384
[2024-04-27 08:40:13] 2024-04-27 06:39:53,478 | INFO     | did not find any defunct processes belonging to 3033384
[2024-04-27 08:40:13] 2024-04-27 06:39:53,478 | INFO     | ready for new job
[2024-04-27 08:40:13] 2024-04-27 06:39:53,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 08:40:13] 2024-04-27 06:39:53,480 | INFO     | *************************************
[2024-04-27 08:40:13] 2024-04-27 06:39:53,480 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 08:40:13] 2024-04-27 06:39:53,480 | INFO     | *************************************
[2024-04-27 08:40:13] 2024-04-27 06:39:53,480 | INFO     | 
[2024-04-27 08:40:13] 2024-04-27 06:39:53,485 | INFO     | architecture information:
[2024-04-27 08:40:13] 2024-04-27 06:39:53,485 | INFO     | executing command: cat /etc/os-release
[2024-04-27 08:40:13] 2024-04-27 06:39:53,499 | INFO     | cat /etc/os-release:
[2024-04-27 08:40:13] NAME="CentOS Linux"
[2024-04-27 08:40:13] VERSION="7 (Core)"
[2024-04-27 08:40:13] ID="centos"
[2024-04-27 08:40:13] ID_LIKE="rhel fedora"
[2024-04-27 08:40:13] VERSION_ID="7"
[2024-04-27 08:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 08:40:13] ANSI_COLOR="0;31"
[2024-04-27 08:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 08:40:13] HOME_URL="https://www.centos.org/"
[2024-04-27 08:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 08:40:13] 
[2024-04-27 08:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 08:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 08:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 08:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 08:40:13] 
[2024-04-27 08:40:13] 2024-04-27 06:39:53,500 | INFO     | *************************************
[2024-04-27 08:40:13] 2024-04-27 06:39:54,002 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2024-04-27 08:40:13] 2024-04-27 06:39:54,023 | INFO     | sufficient remaining disk space (3152967368704 B)
[2024-04-27 08:40:13] 2024-04-27 06:39:54,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 08:40:13] 2024-04-27 06:39:54,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 08:40:13] 2024-04-27 06:39:54,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 08:40:13] 2024-04-27 06:39:54,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 08:40:13] 2024-04-27 06:39:54,025 | INFO     | aborting loop
[2024-04-27 08:40:13] 2024-04-27 06:39:54,488 | INFO     | all job control threads have been joined
[2024-04-27 08:40:13] 2024-04-27 06:39:54,553 | INFO     | all data control threads have been joined
[2024-04-27 08:40:13] 2024-04-27 06:39:54,943 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 08:40:13] 2024-04-27 06:39:54,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 08:40:13] 2024-04-27 06:39:54,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 08:40:13] 2024-04-27 06:39:55,028 | INFO     | [job] retrieve thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,030 | INFO     | [job] job monitor thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,078 | INFO     | [job] validate thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,163 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,259 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,346 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,415 | INFO     | [data] copytool_in thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,465 | INFO     | all payload control threads have been joined
[2024-04-27 08:40:13] 2024-04-27 06:39:55,493 | INFO     | [job] control thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,558 | INFO     | [data] control thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:55,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 08:40:13] 2024-04-27 06:39:56,030 | INFO     | [data] copytool_out thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:56,155 | INFO     | [payload] validate_post thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:56,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 08:40:13] 2024-04-27 06:39:56,470 | INFO     | [payload] control thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:56,533 | INFO     | [payload] failed_post thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:39:56,594 | INFO     | [job] queue monitor thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:40:00,314 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:40:04,192 | INFO     | job.realtimelogging is not enabled
[2024-04-27 08:40:13] 2024-04-27 06:40:05,197 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 08:40:13] 2024-04-27 06:40:07,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47484332467264)>', '<ExcThread(monitor, started 47484569151232)>']
[2024-04-27 08:40:13] 2024-04-27 06:40:08,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 08:40:13] 2024-04-27 06:40:08,008 | INFO     | [monitor] control thread has ended
[2024-04-27 08:40:13] 2024-04-27 06:40:12,236 | INFO     | all workflow threads have been joined
[2024-04-27 08:40:13] 2024-04-27 06:40:12,236 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 08:40:13] 2024-04-27 06:40:12,236 | INFO     | traces error code: 0
[2024-04-27 08:40:13] 2024-04-27 06:40:12,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 08:40:13] 2024-04-27 06:40:12,309 [wrapper] ==== pilot stdout END ====
[2024-04-27 08:40:13] 2024-04-27 06:40:12,314 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 08:40:13] 2024-04-27 06:40:12,316 [wrapper] pilotpid: 3024337
[2024-04-27 08:40:13] 2024-04-27 06:40:12,318 [wrapper] Pilot exit status: 0
[2024-04-27 08:40:13] 2024-04-27 06:40:12,328 [wrapper] pandaids: 6186189376
[2024-04-27 08:40:13] 2024-04-27 06:40:12,420 [wrapper] cleanup: SIGTERM to supervisor_pilot 3888879 3024338
[2024-04-27 08:40:13] 2024-04-27 06:40:12,422 [wrapper] Test setup, not cleaning
[2024-04-27 08:40:13] 2024-04-27 06:40:12,424 [wrapper] ==== wrapper stdout END ====
[2024-04-27 08:40:13] 2024-04-27 06:40:12,426 [wrapper] ==== wrapper stderr END ====
[2024-04-27 08:40:13] 2024-04-27 06:40:12,430 [wrapper] apfmon messages muted
[2024-04-27 08:40:13]  *** Error codes and diagnostics ***
[2024-04-27 08:40:13]     "exeErrorCode": 0,
[2024-04-27 08:40:13]     "exeErrorDiag": "",
[2024-04-27 08:40:13]     "pilotErrorCode": 0,
[2024-04-27 08:40:13]     "pilotErrorDiag": "",
[2024-04-27 08:40:13]  *** Listing of results directory ***
[2024-04-27 08:40:13] total 610748
[2024-04-27 08:40:13] -rwx------ 1 boinc boinc     32211 Apr 25 11:35 runpilot2-wrapper.sh
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc    462745 Apr 25 11:35 pilot3.tar.gz
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc      6173 Apr 25 11:35 queuedata.json
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc       100 Apr 27 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 08:40:13] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 06:05 run_atlas
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc       105 Apr 27 06:05 job.xml
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc      6644 Apr 27 06:05 init_data.xml
[2024-04-27 08:40:13] -rw-r--r-- 2 boinc boinc 450833438 Apr 27 06:05 EVNT.38204309._000219.pool.root.1
[2024-04-27 08:40:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 06:05 start_atlas.sh
[2024-04-27 08:40:13] drwxrwx--x 2 boinc boinc      4096 Apr 27 06:05 shared
[2024-04-27 08:40:13] -rw-r--r-- 2 boinc boinc    474773 Apr 27 06:05 input.tar.gz
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc         0 Apr 27 06:05 boinc_lockfile
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc      2608 Apr 27 06:05 pandaJob.out
[2024-04-27 08:40:13] -rw------- 1 boinc boinc       424 Apr 27 06:05 setup.sh.local
[2024-04-27 08:40:13] -rw------- 1 boinc boinc    997391 Apr 27 06:05 agis_schedconf.cvmfs.json
[2024-04-27 08:40:13] -rw------- 1 boinc boinc         0 Apr 27 06:05 agis_ddmendpoints.agis.ALL.json
[2024-04-27 08:40:13] -rw------- 1 boinc boinc   1315307 Apr 27 06:05 cric_ddmendpoints.json
[2024-04-27 08:40:13] drwx------ 4 boinc boinc      4096 Apr 27 06:05 pilot3
[2024-04-27 08:40:13] -rw------- 1 boinc boinc        95 Apr 27 08:39 pilot_heartbeat.json
[2024-04-27 08:40:13] -rw------- 1 boinc boinc 168725695 Apr 27 08:39 HITS.38204311._004730.pool.root.1
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc       530 Apr 27 08:39 boinc_task_state.xml
[2024-04-27 08:40:13] -rw------- 1 boinc boinc      1043 Apr 27 08:39 memory_monitor_summary.json
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc        27 Apr 27 08:39 wrapper_checkpoint.txt
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc      8192 Apr 27 08:39 boinc_mmap_file
[2024-04-27 08:40:13] -rw------- 1 boinc boinc    297641 Apr 27 08:39 log.38204311._004730.job.log.tgz.1
[2024-04-27 08:40:13] -rw------- 1 boinc boinc      7692 Apr 27 08:39 heartbeat.json
[2024-04-27 08:40:13] -rw------- 1 boinc boinc      4294 Apr 27 08:40 pilotlog.txt
[2024-04-27 08:40:13] -rw------- 1 boinc boinc    882093 Apr 27 08:40 log.38204311._004730.job.log.1
[2024-04-27 08:40:13] -rw------- 1 boinc boinc       357 Apr 27 08:40 output.list
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc       620 Apr 27 08:40 runtime_log
[2024-04-27 08:40:13] -rw------- 1 boinc boinc   1198080 Apr 27 08:40 result.tar.gz
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc     11409 Apr 27 08:40 runtime_log.err
[2024-04-27 08:40:13] -rw------- 1 boinc boinc       655 Apr 27 08:40 GnnNDmEhAK5np2BDcpmwOghnABFKDmABFKDmJjxZDm81HKDmZWzsdm.diag
[2024-04-27 08:40:13] -rw-r--r-- 1 boinc boinc     21300 Apr 27 08:40 stderr.txt
[2024-04-27 08:40:13] HITS file was successfully produced:
[2024-04-27 08:40:13] -rw------- 1 boinc boinc 168725695 Apr 27 08:39 shared/HITS.pool.root.1
[2024-04-27 08:40:13]  *** Contents of shared directory: ***
[2024-04-27 08:40:13] total 606704
[2024-04-27 08:40:13] -rw-r--r-- 2 boinc boinc 450833438 Apr 27 06:05 ATLAS.root_0
[2024-04-27 08:40:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 06:05 start_atlas.sh
[2024-04-27 08:40:13] -rw-r--r-- 2 boinc boinc    474773 Apr 27 06:05 input.tar.gz
[2024-04-27 08:40:13] -rw------- 1 boinc boinc 168725695 Apr 27 08:39 HITS.pool.root.1
[2024-04-27 08:40:13] -rw------- 1 boinc boinc   1198080 Apr 27 08:40 result.tar.gz
08:40:14 (3019694): run_atlas exited; CPU time 34103.049967
08:40:14 (3019694): called boinc_finish(0)

</stderr_txt>
]]>

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