Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:56:37 (1838303): wrapper (7.7.26015): starting
07:56:37 (1838303): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 07:56:37] Arguments: --nthreads 4
[2024-04-27 07:56:37] Threads: 4
[2024-04-27 07:56:37] Checking for CVMFS
[2024-04-27 07:56:37] No cvmfs_config command found, will try listing directly
[2024-04-27 07:56:37] CVMFS is ok
[2024-04-27 07:56:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 07:56:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 07:56:37] Further information can be found at the LHC@home message board.
[2024-04-27 07:56:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 07:56:37] Checking for apptainer binary...
[2024-04-27 07:56:37] which: no apptainer in ((null))
[2024-04-27 07:56:37] apptainer is not installed, using version from CVMFS
[2024-04-27 07:56:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 07:56:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-04-27 07:56:38] apptainer works
[2024-04-27 07:56:38] Set ATHENA_PROC_NUMBER=4
[2024-04-27 07:56:38] Set ATHENA_CORE_NUMBER=4
[2024-04-27 07:56:38] Starting ATLAS job with PandaID=6186149795
[2024-04-27 07:56:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 11:02:53]  *** The last 200 lines of the pilot log: ***
[2024-04-27 11:02:53]  direct_access_lan=False
[2024-04-27 11:02:53]  direct_access_wan=False
[2024-04-27 11:02:53]  domain=
[2024-04-27 11:02:53]  filesize=300950
[2024-04-27 11:02:53]  filetype=log
[2024-04-27 11:02:53]  guid=c82b503c-fe32-4c9a-a11b-2195b4cce504
[2024-04-27 11:02:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 11:02:53]  is_tar=False
[2024-04-27 11:02:53]  lfn=log.38204263._005843.job.log.tgz.1
[2024-04-27 11:02:53]  mtime=0
[2024-04-27 11:02:53]  protocol_id=None
[2024-04-27 11:02:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 11:02:53]  replicas=None
[2024-04-27 11:02:53]  scope=mc23_13p6TeV
[2024-04-27 11:02:53]  status=None
[2024-04-27 11:02:53]  status_code=0
[2024-04-27 11:02:53]  storage_token=
[2024-04-27 11:02:53]  surl=/scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6186149795/log.38204263._005843.job.log.tgz.1
[2024-04-27 11:02:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/68/log.38204263._005843.job.log.tgz.1
[2024-04-27 11:02:53]  workdir=None
[2024-04-27 11:02:53] ]
[2024-04-27 11:02:53] 2024-04-27 09:02:29,260 | INFO     | transferring file log.38204263._005843.job.log.tgz.1 from /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6186149795/log.38204263._005843.job.log.tgz.1 to /scratch/b
[2024-04-27 11:02:53] 2024-04-27 09:02:29,260 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6186149795/log.38204263._005843.job.log.tgz.1 /scratch/boinc/var/slot56/slots/0/lo
[2024-04-27 11:02:53] 2024-04-27 09:02:29,275 | INFO     | adding to output.list: log.38204263._005843.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/68/log.38204263._005843.job.log.tg
[2024-04-27 11:02:53] 2024-04-27 09:02:29,276 | INFO     | summary of transferred files:
[2024-04-27 11:02:53] 2024-04-27 09:02:29,276 | INFO     |  -- lfn=log.38204263._005843.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 11:02:53] 2024-04-27 09:02:29,277 | INFO     | stage-out finished correctly
[2024-04-27 11:02:53] 2024-04-27 09:02:31,065 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 11:02:53] 2024-04-27 09:02:31,546 | WARNING  | process 1849872 is no longer using CPU - aborting
[2024-04-27 11:02:53] 2024-04-27 09:02:31,546 | INFO     | will not send any job update
[2024-04-27 11:02:53] 2024-04-27 09:02:33,335 | INFO     | job 6186149795 has state=finished
[2024-04-27 11:02:53] 2024-04-27 09:02:33,335 | INFO     | preparing for final server update for job 6186149795 in state='finished'
[2024-04-27 11:02:53] 2024-04-27 09:02:33,335 | INFO     | this job has now completed (state=finished)
[2024-04-27 11:02:53] 2024-04-27 09:02:33,335 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 11:02:53] 2024-04-27 09:02:33,336 | INFO     | job 6186149795 has finished - writing final server update
[2024-04-27 11:02:53] 2024-04-27 09:02:33,336 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1871202/.job.ad'
[2024-04-27 11:02:53] 2024-04-27 09:02:33,336 | INFO     | total number of processed events: 400 (read)
[2024-04-27 11:02:53] 2024-04-27 09:02:33,339 | INFO     | executing command: lscpu
[2024-04-27 11:02:53] 2024-04-27 09:02:33,378 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-27 11:02:53] 2024-04-27 09:02:33,378 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 11:02:53] 2024-04-27 09:02:33,409 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 11:02:53] 2024-04-27 09:02:34,049 | INFO     | monitor loop #857: job 0:6186149795 is in state 'finished'
[2024-04-27 11:02:53] 2024-04-27 09:02:34,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,171 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-27 11:02:53] 2024-04-27 09:02:36,171 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6186149795/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,172 | INFO     | extracted standard info from prmon json
[2024-04-27 11:02:53] 2024-04-27 09:02:36,172 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 11:02:53] 2024-04-27 09:02:36,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 11:02:53] 2024-04-27 09:02:36,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 11:02:53] 2024-04-27 09:02:36,174 | INFO     | fitting pss+swap vs Time
[2024-04-27 11:02:53] 2024-04-27 09:02:36,176 | INFO     | current chi2=4.181165093969158 (change=16.189266886573986 %)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,176 | INFO     | right removable region: 177
[2024-04-27 11:02:53] 2024-04-27 09:02:36,176 | INFO     | current chi2=2.4374930530168033 (change=51.14087218730421 %)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,177 | INFO     | current chi2=0.9022182652156224 (change=62.98581183240801 %)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,178 | INFO     | current chi2=0.8520619913891903 (change=5.55921729366067 %)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,178 | INFO     | left removable region: 30
[2024-04-27 11:02:53] 2024-04-27 09:02:36,178 | INFO     | current memory leak: 2.67 B/s (using 147 data points, chi2=0.00)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | ..............................
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | . Timing measurements:
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | . get job = 0 s
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | . initial setup = 1 s
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | . payload setup = 4 s
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | . stage-in = 0 s
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | . payload execution = 11120 s
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | . stage-out = 0 s
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | . log creation = 0 s
[2024-04-27 11:02:53] 2024-04-27 09:02:36,179 | INFO     | ..............................
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | 
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | job summary report
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | --------------------------------------------------
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | PanDA job id: 6186149795
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | task id: 38204263
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | errors: (none)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | pilot state: finished 
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | transexitcode: 0
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | exeerrorcode: 0
[2024-04-27 11:02:53] 2024-04-27 09:02:36,231 | INFO     | exeerrordiag: 
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | exitcode: 0
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | exitmsg: OK
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | cpuconsumptiontime: 41763 s
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | nevents: 400
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | neventsw: 0
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | pid: 1849872
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | pgrp: 1849872
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | corecount: 4
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | event service: False
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | sizes: {0: 2375717, 3: 2375923, 11: 2375951, 11127: 2405117, 11129: 2414099, 11131: 2414155, 11136: 2414453}
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | --------------------------------------------------
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | 
[2024-04-27 11:02:53] 2024-04-27 09:02:36,232 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2024-04-27 11:02:53] 2024-04-27 09:02:36,248 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,248 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,248 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,248 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | job 6186149795 has completed (purged errors)
[2024-04-27 11:02:53] 2024-04-27 09:02:36,249 | INFO     | overall cleanup function is called
[2024-04-27 11:02:53] 2024-04-27 09:02:37,256 | INFO     | --- collectZombieJob: --- 10, [1849872]
[2024-04-27 11:02:53] 2024-04-27 09:02:37,256 | INFO     | zombie collector waiting for pid 1849872
[2024-04-27 11:02:53] 2024-04-27 09:02:37,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 11:02:53] 2024-04-27 09:02:38,260 | INFO     | collected zombie processes
[2024-04-27 11:02:53] 2024-04-27 09:02:38,260 | INFO     | will now attempt to kill all subprocesses of pid=1849872
[2024-04-27 11:02:53] 2024-04-27 09:02:38,402 | INFO     | process IDs to be killed: [1849872] (in reverse order)
[2024-04-27 11:02:53] 2024-04-27 09:02:38,497 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 11:02:53] 2024-04-27 09:02:38,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 11:02:53] 2024-04-27 09:02:38,503 | INFO     | did not find any defunct processes belonging to 1849872
[2024-04-27 11:02:53] 2024-04-27 09:02:38,509 | INFO     | did not find any defunct processes belonging to 1849872
[2024-04-27 11:02:53] 2024-04-27 09:02:38,509 | INFO     | ready for new job
[2024-04-27 11:02:53] 2024-04-27 09:02:38,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 11:02:53] 2024-04-27 09:02:38,510 | INFO     | *************************************
[2024-04-27 11:02:53] 2024-04-27 09:02:38,510 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 11:02:53] 2024-04-27 09:02:38,510 | INFO     | *************************************
[2024-04-27 11:02:53] 2024-04-27 09:02:38,510 | INFO     | 
[2024-04-27 11:02:53] 2024-04-27 09:02:38,513 | INFO     | architecture information:
[2024-04-27 11:02:53] 2024-04-27 09:02:38,513 | INFO     | executing command: cat /etc/os-release
[2024-04-27 11:02:53] 2024-04-27 09:02:38,525 | INFO     | cat /etc/os-release:
[2024-04-27 11:02:53] NAME="CentOS Linux"
[2024-04-27 11:02:53] VERSION="7 (Core)"
[2024-04-27 11:02:53] ID="centos"
[2024-04-27 11:02:53] ID_LIKE="rhel fedora"
[2024-04-27 11:02:53] VERSION_ID="7"
[2024-04-27 11:02:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 11:02:53] ANSI_COLOR="0;31"
[2024-04-27 11:02:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 11:02:53] HOME_URL="https://www.centos.org/"
[2024-04-27 11:02:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 11:02:53] 
[2024-04-27 11:02:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 11:02:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 11:02:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 11:02:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 11:02:53] 
[2024-04-27 11:02:53] 2024-04-27 09:02:38,526 | INFO     | *************************************
[2024-04-27 11:02:53] 2024-04-27 09:02:39,029 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2024-04-27 11:02:53] 2024-04-27 09:02:39,044 | INFO     | sufficient remaining disk space (626257821696 B)
[2024-04-27 11:02:53] 2024-04-27 09:02:39,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 11:02:53] 2024-04-27 09:02:39,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 11:02:53] 2024-04-27 09:02:39,045 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 11:02:53] 2024-04-27 09:02:39,045 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 11:02:53] 2024-04-27 09:02:39,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 11:02:53] 2024-04-27 09:02:39,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 11:02:53] 2024-04-27 09:02:39,057 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-27 11:02:53] 2024-04-27 09:02:39,058 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-27 11:02:53] 2024-04-27 09:02:39,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 11:02:53] 2024-04-27 09:02:39,058 | INFO     | will abort loop
[2024-04-27 11:02:53] 2024-04-27 09:02:39,182 | INFO     | all payload control threads have been joined
[2024-04-27 11:02:53] 2024-04-27 09:02:39,438 | INFO     | all job control threads have been joined
[2024-04-27 11:02:53] 2024-04-27 09:02:39,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 11:02:53] 2024-04-27 09:02:40,050 | INFO     | [job] retrieve thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,060 | INFO     | all data control threads have been joined
[2024-04-27 11:02:53] 2024-04-27 09:02:40,063 | INFO     | [job] job monitor thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,187 | INFO     | [payload] control thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,210 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,324 | INFO     | [job] validate thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,443 | INFO     | [job] control thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,514 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,631 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,766 | INFO     | [data] copytool_in thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:40,978 | INFO     | [payload] failed_post thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:41,065 | INFO     | [data] control thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:41,221 | INFO     | [payload] validate_post thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:41,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 11:02:53] 2024-04-27 09:02:41,387 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:41,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 11:02:53] 2024-04-27 09:02:41,846 | INFO     | [data] copytool_out thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:42,247 | INFO     | [job] queue monitor thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:45,629 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 11:02:53] 2024-04-27 09:02:47,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47679006209088)>', '<ExcThread(monitor, started 47679451191040)>']
[2024-04-27 11:02:53] 2024-04-27 09:02:48,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 11:02:53] 2024-04-27 09:02:48,089 | INFO     | [monitor] control thread has ended
[2024-04-27 11:02:53] 2024-04-27 09:02:52,438 | INFO     | all workflow threads have been joined
[2024-04-27 11:02:53] 2024-04-27 09:02:52,438 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 11:02:53] 2024-04-27 09:02:52,438 | INFO     | traces error code: 0
[2024-04-27 11:02:53] 2024-04-27 09:02:52,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 11:02:53] 2024-04-27 09:02:52,503 [wrapper] ==== pilot stdout END ====
[2024-04-27 11:02:53] 2024-04-27 09:02:52,505 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 11:02:53] 2024-04-27 09:02:52,506 [wrapper] pilotpid: 1842707
[2024-04-27 11:02:53] 2024-04-27 09:02:52,509 [wrapper] Pilot exit status: 0
[2024-04-27 11:02:53] 2024-04-27 09:02:52,516 [wrapper] pandaids: 6186149795
[2024-04-27 11:02:53] 2024-04-27 09:02:52,574 [wrapper] cleanup: SIGTERM to supervisor_pilot 2348909 1842708
[2024-04-27 11:02:53] 2024-04-27 09:02:52,576 [wrapper] Test setup, not cleaning
[2024-04-27 11:02:53] 2024-04-27 09:02:52,577 [wrapper] ==== wrapper stdout END ====
[2024-04-27 11:02:53] 2024-04-27 09:02:52,579 [wrapper] ==== wrapper stderr END ====
[2024-04-27 11:02:53] 2024-04-27 09:02:52,582 [wrapper] apfmon messages muted
[2024-04-27 11:02:53]  *** Error codes and diagnostics ***
[2024-04-27 11:02:53]     "exeErrorCode": 0,
[2024-04-27 11:02:53]     "exeErrorDiag": "",
[2024-04-27 11:02:53]     "pilotErrorCode": 0,
[2024-04-27 11:02:53]     "pilotErrorDiag": "",
[2024-04-27 11:02:53]  *** Listing of results directory ***
[2024-04-27 11:02:53] total 698020
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc    462745 Apr 25 10:34 pilot3.tar.gz
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc      6720 Apr 25 10:40 queuedata.json
[2024-04-27 11:02:53] -rwx------ 1 boinc boinc     32211 Apr 25 10:41 runpilot2-wrapper.sh
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc       100 Apr 27 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 11:02:53] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 07:56 run_atlas
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc       105 Apr 27 07:56 job.xml
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc      6663 Apr 27 07:56 init_data.xml
[2024-04-27 11:02:53] -rw-r--r-- 2 boinc boinc 519047913 Apr 27 07:56 EVNT.38204261._000215.pool.root.1
[2024-04-27 11:02:53] -rw-r--r-- 2 boinc boinc     17537 Apr 27 07:56 start_atlas.sh
[2024-04-27 11:02:53] drwxrwx--x 2 boinc boinc      4096 Apr 27 07:56 shared
[2024-04-27 11:02:53] -rw-r--r-- 2 boinc boinc    474818 Apr 27 07:56 input.tar.gz
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc         0 Apr 27 07:56 boinc_lockfile
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc      2650 Apr 27 07:56 pandaJob.out
[2024-04-27 11:02:53] -rw------- 1 boinc boinc       424 Apr 27 07:56 setup.sh.local
[2024-04-27 11:02:53] -rw------- 1 boinc boinc    997391 Apr 27 07:56 agis_schedconf.cvmfs.json
[2024-04-27 11:02:53] -rw------- 1 boinc boinc   1315307 Apr 27 07:56 cric_ddmendpoints.json
[2024-04-27 11:02:53] drwx------ 4 boinc boinc      4096 Apr 27 07:56 pilot3
[2024-04-27 11:02:53] -rw------- 1 boinc boinc 189508678 Apr 27 11:01 HITS.38204263._005843.pool.root.1
[2024-04-27 11:02:53] -rw------- 1 boinc boinc        95 Apr 27 11:02 pilot_heartbeat.json
[2024-04-27 11:02:53] -rw------- 1 boinc boinc      1047 Apr 27 11:02 memory_monitor_summary.json
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc       531 Apr 27 11:02 boinc_task_state.xml
[2024-04-27 11:02:53] -rw------- 1 boinc boinc         0 Apr 27 11:02 agis_ddmendpoints.agis.ALL.json
[2024-04-27 11:02:53] -rw------- 1 boinc boinc    300950 Apr 27 11:02 log.38204263._005843.job.log.tgz.1
[2024-04-27 11:02:53] -rw------- 1 boinc boinc      7734 Apr 27 11:02 heartbeat.json
[2024-04-27 11:02:53] -rw------- 1 boinc boinc      4530 Apr 27 11:02 pilotlog.txt
[2024-04-27 11:02:53] -rw------- 1 boinc boinc   1064319 Apr 27 11:02 log.38204263._005843.job.log.1
[2024-04-27 11:02:53] -rw------- 1 boinc boinc       357 Apr 27 11:02 output.list
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc       620 Apr 27 11:02 runtime_log
[2024-04-27 11:02:53] -rw------- 1 boinc boinc   1382400 Apr 27 11:02 result.tar.gz
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc     11410 Apr 27 11:02 runtime_log.err
[2024-04-27 11:02:53] -rw------- 1 boinc boinc       657 Apr 27 11:02 7v9MDm0q9J5nsSi4apGgGQJmABFKDmABFKDmRLXKDm7HSKDmiPaw4n.diag
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc      8192 Apr 27 11:02 boinc_mmap_file
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc        28 Apr 27 11:02 wrapper_checkpoint.txt
[2024-04-27 11:02:53] -rw-r--r-- 1 boinc boinc     21003 Apr 27 11:02 stderr.txt
[2024-04-27 11:02:53] HITS file was successfully produced:
[2024-04-27 11:02:53] -rw------- 1 boinc boinc 189508678 Apr 27 11:01 shared/HITS.pool.root.1
[2024-04-27 11:02:53]  *** Contents of shared directory: ***
[2024-04-27 11:02:53] total 693796
[2024-04-27 11:02:53] -rw-r--r-- 2 boinc boinc 519047913 Apr 27 07:56 ATLAS.root_0
[2024-04-27 11:02:53] -rw-r--r-- 2 boinc boinc     17537 Apr 27 07:56 start_atlas.sh
[2024-04-27 11:02:53] -rw-r--r-- 2 boinc boinc    474818 Apr 27 07:56 input.tar.gz
[2024-04-27 11:02:53] -rw------- 1 boinc boinc 189508678 Apr 27 11:01 HITS.pool.root.1
[2024-04-27 11:02:53] -rw------- 1 boinc boinc   1382400 Apr 27 11:02 result.tar.gz
11:02:55 (1838303): run_atlas exited; CPU time 41521.915397
11:02:55 (1838303): called boinc_finish(0)

</stderr_txt>
]]>

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