Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:55:27 (2994989): wrapper (7.7.26015): starting
14:55:27 (2994989): wrapper: running run_atlas (--nthreads 5)
[2024-04-27 14:55:27] Arguments: --nthreads 5
[2024-04-27 14:55:27] Threads: 5
[2024-04-27 14:55:27] Checking for CVMFS
[2024-04-27 14:55:27] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-27 14:55:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-27 14:55:28] Running cvmfs_config stat atlas.cern.ch
[2024-04-27 14:55:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-27 14:55:28] 2.11.2.0 2489 7545 59496 132099 3 56 2767232 4096001 904 130560 0 13073547 99.994 1194646 6877 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-04-27 14:55:28] CVMFS is ok
[2024-04-27 14:55:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 14:55:28] Checking for apptainer binary...
[2024-04-27 14:55:28] Using apptainer found in PATH at /usr/bin/apptainer
[2024-04-27 14:55:28] Running /usr/bin/apptainer --version
[2024-04-27 14:55:28] apptainer version 1.2.5
[2024-04-27 14:55:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 14:55:28] TS-P310
[2024-04-27 14:55:28] apptainer works
[2024-04-27 14:55:28] Set ATHENA_PROC_NUMBER=5
[2024-04-27 14:55:28] Set ATHENA_CORE_NUMBER=5
[2024-04-27 14:55:28] Starting ATLAS job with PandaID=6186148492
[2024-04-27 14:55:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 17:05:44]  *** The last 200 lines of the pilot log: ***
[2024-04-27 17:05:44]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 17:05:44]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 17:05:44]  direct_access_lan=False
[2024-04-27 17:05:44]  direct_access_wan=False
[2024-04-27 17:05:44]  domain=
[2024-04-27 17:05:44]  filesize=282689
[2024-04-27 17:05:44]  filetype=log
[2024-04-27 17:05:44]  guid=81f134dd-0e93-44bb-99cd-f670b0c4ec40
[2024-04-27 17:05:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 17:05:44]  is_tar=False
[2024-04-27 17:05:44]  lfn=log.38204263._005584.job.log.tgz.1
[2024-04-27 17:05:44]  mtime=0
[2024-04-27 17:05:44]  protocol_id=None
[2024-04-27 17:05:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 17:05:44]  replicas=None
[2024-04-27 17:05:44]  scope=mc23_13p6TeV
[2024-04-27 17:05:44]  status=None
[2024-04-27 17:05:44]  status_code=0
[2024-04-27 17:05:44]  storage_token=
[2024-04-27 17:05:44]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6186148492/log.38204263._005584.job.log.tgz.1
[2024-04-27 17:05:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/0b/log.38204263._005584.job.log.tgz.1
[2024-04-27 17:05:44]  workdir=None
[2024-04-27 17:05:44] ]
[2024-04-27 17:05:44] 2024-04-27 15:05:19,046 | INFO     | transferring file log.38204263._005584.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6186148492/log.38204263._005584.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-04-27 17:05:44] 2024-04-27 15:05:19,046 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6186148492/log.38204263._005584.job.log.tgz.1 /var/lib/boinc/slots/0/log.38204263._005584.job
[2024-04-27 17:05:44] 2024-04-27 15:05:19,059 | INFO     | adding to output.list: log.38204263._005584.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/0b/log.38204263._005584.job.log.tg
[2024-04-27 17:05:44] 2024-04-27 15:05:19,059 | INFO     | summary of transferred files:
[2024-04-27 17:05:44] 2024-04-27 15:05:19,059 | INFO     |  -- lfn=log.38204263._005584.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 17:05:44] 2024-04-27 15:05:19,060 | INFO     | stage-out finished correctly
[2024-04-27 17:05:44] 2024-04-27 15:05:19,125 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 17:05:44] 2024-04-27 15:05:19,187 | INFO     | job 6186148492 has state=finished
[2024-04-27 17:05:44] 2024-04-27 15:05:19,187 | INFO     | preparing for final server update for job 6186148492 in state='finished'
[2024-04-27 17:05:44] 2024-04-27 15:05:19,192 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /var/lib/boinc/slots/0/PanDA_Pilot-6186148492
[2024-04-27 17:05:44] 2024-04-27 15:05:20,026 | INFO     | monitor loop #612: job 0:6186148492 is in state 'finished'
[2024-04-27 17:05:44] 2024-04-27 15:05:20,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 17:05:44] 2024-04-27 15:05:20,486 | INFO     | this job has now completed (state=finished)
[2024-04-27 17:05:44] 2024-04-27 15:05:20,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 17:05:44] 2024-04-27 15:05:20,486 | INFO     | job 6186148492 has finished - writing final server update
[2024-04-27 17:05:44] 2024-04-27 15:05:20,486 | INFO     | total number of processed events: 400 (read)
[2024-04-27 17:05:44] 2024-04-27 15:05:20,487 | INFO     | executing command: lscpu
[2024-04-27 17:05:44] 2024-04-27 15:05:20,501 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-04-27 17:05:44] 2024-04-27 15:05:20,501 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 17:05:44] 2024-04-27 15:05:20,520 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 17:05:44] 2024-04-27 15:05:22,530 | INFO     | monitor loop #613: job 0:6186148492 is in state 'finished'
[2024-04-27 17:05:44] 2024-04-27 15:05:22,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,557 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 17:05:44] 2024-04-27 15:05:23,558 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6186148492/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,558 | INFO     | extracted standard info from prmon json
[2024-04-27 17:05:44] 2024-04-27 15:05:23,559 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 17:05:44] 2024-04-27 15:05:23,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 17:05:44] 2024-04-27 15:05:23,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 17:05:44] 2024-04-27 15:05:23,561 | INFO     | fitting pss+swap vs Time
[2024-04-27 17:05:44] 2024-04-27 15:05:23,562 | INFO     | current chi2=2.0184935985826176 (change=24.53413348572486 %)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,562 | INFO     | right removable region: 122
[2024-04-27 17:05:44] 2024-04-27 15:05:23,563 | INFO     | current chi2=0.8696849344176047 (change=67.48489704583585 %)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,563 | INFO     | current chi2=0.8476133814115738 (change=2.5378791942407752 %)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,563 | INFO     | left removable region: 20
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | current memory leak: 2.16 B/s (using 102 data points, chi2=0.00)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | ..............................
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | . Timing measurements:
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | . get job = 0 s
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | . initial setup = 1 s
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | . payload setup = 3 s
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | . stage-in = 0 s
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | . payload execution = 7761 s
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | . stage-out = 0 s
[2024-04-27 17:05:44] 2024-04-27 15:05:23,564 | INFO     | . log creation = 0 s
[2024-04-27 17:05:44] 2024-04-27 15:05:23,565 | INFO     | ..............................
[2024-04-27 17:05:44] 2024-04-27 15:05:23,629 | INFO     | 
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | job summary report
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | --------------------------------------------------
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | PanDA job id: 6186148492
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | task id: 38204263
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | errors: (none)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | pilot state: finished 
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | transexitcode: 0
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | exeerrorcode: 0
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | exeerrordiag: 
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | exitcode: 0
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | exitmsg: OK
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | cpuconsumptiontime: 29743 s
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | nevents: 400
[2024-04-27 17:05:44] 2024-04-27 15:05:23,630 | INFO     | neventsw: 0
[2024-04-27 17:05:44] 2024-04-27 15:05:23,631 | INFO     | pid: 3005568
[2024-04-27 17:05:44] 2024-04-27 15:05:23,631 | INFO     | pgrp: 3005568
[2024-04-27 17:05:44] 2024-04-27 15:05:23,631 | INFO     | corecount: 5
[2024-04-27 17:05:44] 2024-04-27 15:05:23,631 | INFO     | event service: False
[2024-04-27 17:05:44] 2024-04-27 15:05:23,631 | INFO     | sizes: {0: 2375783, 3: 2375989, 11: 2376017, 7769: 2403609, 7770: 2412625, 7774: 2412739}
[2024-04-27 17:05:44] 2024-04-27 15:05:23,631 | INFO     | --------------------------------------------------
[2024-04-27 17:05:44] 2024-04-27 15:05:23,631 | INFO     | 
[2024-04-27 17:05:44] 2024-04-27 15:05:23,631 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | job 6186148492 has completed (purged errors)
[2024-04-27 17:05:44] 2024-04-27 15:05:23,646 | INFO     | overall cleanup function is called
[2024-04-27 17:05:44] 2024-04-27 15:05:24,653 | INFO     | --- collectZombieJob: --- 10, [3005568]
[2024-04-27 17:05:44] 2024-04-27 15:05:24,653 | INFO     | zombie collector waiting for pid 3005568
[2024-04-27 17:05:44] 2024-04-27 15:05:24,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 17:05:44] 2024-04-27 15:05:25,658 | INFO     | collected zombie processes
[2024-04-27 17:05:44] 2024-04-27 15:05:25,658 | INFO     | will now attempt to kill all subprocesses of pid=3005568
[2024-04-27 17:05:44] 2024-04-27 15:05:25,701 | INFO     | process IDs to be killed: [3005568] (in reverse order)
[2024-04-27 17:05:44] 2024-04-27 15:05:25,733 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 17:05:44] 2024-04-27 15:05:25,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 17:05:44] 2024-04-27 15:05:25,735 | INFO     | did not find any defunct processes belonging to 3005568
[2024-04-27 17:05:44] 2024-04-27 15:05:25,737 | INFO     | did not find any defunct processes belonging to 3005568
[2024-04-27 17:05:44] 2024-04-27 15:05:25,737 | INFO     | ready for new job
[2024-04-27 17:05:44] 2024-04-27 15:05:25,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 17:05:44] 2024-04-27 15:05:25,738 | INFO     | *************************************
[2024-04-27 17:05:44] 2024-04-27 15:05:25,738 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 17:05:44] 2024-04-27 15:05:25,738 | INFO     | *************************************
[2024-04-27 17:05:44] 2024-04-27 15:05:25,738 | INFO     | 
[2024-04-27 17:05:44] 2024-04-27 15:05:25,739 | INFO     | architecture information:
[2024-04-27 17:05:44] 2024-04-27 15:05:25,739 | INFO     | executing command: cat /etc/os-release
[2024-04-27 17:05:44] 2024-04-27 15:05:25,749 | INFO     | cat /etc/os-release:
[2024-04-27 17:05:44] NAME="CentOS Linux"
[2024-04-27 17:05:44] VERSION="7 (Core)"
[2024-04-27 17:05:44] ID="centos"
[2024-04-27 17:05:44] ID_LIKE="rhel fedora"
[2024-04-27 17:05:44] VERSION_ID="7"
[2024-04-27 17:05:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 17:05:44] ANSI_COLOR="0;31"
[2024-04-27 17:05:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 17:05:44] HOME_URL="https://www.centos.org/"
[2024-04-27 17:05:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 17:05:44] 
[2024-04-27 17:05:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 17:05:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 17:05:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 17:05:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 17:05:44] 
[2024-04-27 17:05:44] 2024-04-27 15:05:25,749 | INFO     | *************************************
[2024-04-27 17:05:44] 2024-04-27 15:05:26,251 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-04-27 17:05:44] 2024-04-27 15:05:26,262 | INFO     | sufficient remaining disk space (64985497600 B)
[2024-04-27 17:05:44] 2024-04-27 15:05:26,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 17:05:44] 2024-04-27 15:05:26,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 17:05:44] 2024-04-27 15:05:26,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 17:05:44] 2024-04-27 15:05:26,262 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 17:05:44] 2024-04-27 15:05:26,263 | INFO     | aborting loop
[2024-04-27 17:05:44] 2024-04-27 15:05:26,263 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 17:05:44] 2024-04-27 15:05:26,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 17:05:44] 2024-04-27 15:05:26,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 17:05:44] 2024-04-27 15:05:26,928 | INFO     | all data control threads have been joined
[2024-04-27 17:05:44] 2024-04-27 15:05:27,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 17:05:44] 2024-04-27 15:05:27,268 | INFO     | [job] retrieve thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:27,268 | INFO     | [job] job monitor thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:27,521 | INFO     | [payload] validate_post thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:27,644 | INFO     | [job] validate thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:27,728 | INFO     | all payload control threads have been joined
[2024-04-27 17:05:44] 2024-04-27 15:05:27,760 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:27,904 | INFO     | all job control threads have been joined
[2024-04-27 17:05:44] 2024-04-27 15:05:27,905 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:27,931 | INFO     | [data] control thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:28,008 | INFO     | [payload] failed_post thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:28,251 | INFO     | [data] copytool_in thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:28,468 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:28,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 17:05:44] 2024-04-27 15:05:28,731 | INFO     | [payload] control thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:28,908 | INFO     | [job] control thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:29,139 | INFO     | [data] copytool_out thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:29,638 | INFO     | [job] queue monitor thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:29,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 17:05:44] 2024-04-27 15:05:33,699 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:37,049 | INFO     | job.realtimelogging is not enabled
[2024-04-27 17:05:44] 2024-04-27 15:05:38,054 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 17:05:44] 2024-04-27 15:05:38,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134660876096)>', '<ExcThread(monitor, started 140134137702144)>']
[2024-04-27 17:05:44] 2024-04-27 15:05:39,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 17:05:44] 2024-04-27 15:05:39,317 | INFO     | [monitor] control thread has ended
[2024-04-27 17:05:44] 2024-04-27 15:05:43,881 | INFO     | all workflow threads have been joined
[2024-04-27 17:05:44] 2024-04-27 15:05:43,881 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 17:05:44] 2024-04-27 15:05:43,882 | INFO     | traces error code: 0
[2024-04-27 17:05:44] 2024-04-27 15:05:43,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 17:05:44] 2024-04-27 15:05:43,938 [wrapper] ==== pilot stdout END ====
[2024-04-27 17:05:44] 2024-04-27 15:05:43,939 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 17:05:44] 2024-04-27 15:05:43,941 [wrapper] pilotpid: 2999168
[2024-04-27 17:05:44] 2024-04-27 15:05:43,943 [wrapper] Pilot exit status: 0
[2024-04-27 17:05:44] 2024-04-27 15:05:43,951 [wrapper] pandaids: 6186148492
[2024-04-27 17:05:44] 2024-04-27 15:05:43,969 [wrapper] cleanup: SIGTERM to supervisor_pilot 3046587 2999169
[2024-04-27 17:05:44] 2024-04-27 15:05:43,972 [wrapper] Test setup, not cleaning
[2024-04-27 17:05:44] 2024-04-27 15:05:43,974 [wrapper] ==== wrapper stdout END ====
[2024-04-27 17:05:44] 2024-04-27 15:05:43,976 [wrapper] ==== wrapper stderr END ====
[2024-04-27 17:05:44] 2024-04-27 15:05:43,980 [wrapper] apfmon messages muted
[2024-04-27 17:05:44]  *** Error codes and diagnostics ***
[2024-04-27 17:05:44]     "exeErrorCode": 0,
[2024-04-27 17:05:44]     "exeErrorDiag": "",
[2024-04-27 17:05:44]     "pilotErrorCode": 0,
[2024-04-27 17:05:44]     "pilotErrorDiag": "",
[2024-04-27 17:05:44]  *** Listing of results directory ***
[2024-04-27 17:05:44] insgesamt 699916
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc    462745 25. Apr 10:13 pilot3.tar.gz
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc      6720 25. Apr 10:16 queuedata.json
[2024-04-27 17:05:44] -rwx------ 1 boinc boinc     32211 25. Apr 10:17 runpilot2-wrapper.sh
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc       100 27. Apr 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 17:05:44] -rwxr-xr-x 1 boinc boinc      7986 27. Apr 14:55 run_atlas
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc       105 27. Apr 14:55 job.xml
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc      6723 27. Apr 14:55 init_data.xml
[2024-04-27 17:05:44] -rw-r--r-- 2 boinc boinc 519414320 27. Apr 14:55 EVNT.38204261._000085.pool.root.1
[2024-04-27 17:05:44] drwxrwx--x 2 boinc boinc      4096 27. Apr 14:55 shared
[2024-04-27 17:05:44] -rw-r--r-- 2 boinc boinc    474817 27. Apr 14:55 input.tar.gz
[2024-04-27 17:05:44] -rw-r--r-- 2 boinc boinc     17537 27. Apr 14:55 start_atlas.sh
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc         0 27. Apr 14:55 boinc_lockfile
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc      2650 27. Apr 14:55 pandaJob.out
[2024-04-27 17:05:44] -rw------- 1 boinc boinc       461 27. Apr 14:55 setup.sh.local
[2024-04-27 17:05:44] -rw------- 1 boinc boinc    997154 27. Apr 14:55 agis_schedconf.cvmfs.json
[2024-04-27 17:05:44] -rw------- 1 boinc boinc         0 27. Apr 14:55 agis_ddmendpoints.agis.ALL.json
[2024-04-27 17:05:44] -rw------- 1 boinc boinc   1315307 27. Apr 14:55 cric_ddmendpoints.json
[2024-04-27 17:05:44] drwx------ 4 boinc boinc      4096 27. Apr 14:55 pilot3
[2024-04-27 17:05:44] -rw------- 1 boinc boinc 191757299 27. Apr 17:04 HITS.38204263._005584.pool.root.1
[2024-04-27 17:05:44] -rw------- 1 boinc boinc        95 27. Apr 17:04 pilot_heartbeat.json
[2024-04-27 17:05:44] -rw------- 1 boinc boinc      1034 27. Apr 17:05 memory_monitor_summary.json
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc       530 27. Apr 17:05 boinc_task_state.xml
[2024-04-27 17:05:44] -rw------- 1 boinc boinc    282689 27. Apr 17:05 log.38204263._005584.job.log.tgz.1
[2024-04-27 17:05:44] -rw------- 1 boinc boinc      7640 27. Apr 17:05 heartbeat.json
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc        27 27. Apr 17:05 wrapper_checkpoint.txt
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc      8192 27. Apr 17:05 boinc_mmap_file
[2024-04-27 17:05:44] -rw------- 1 boinc boinc      4406 27. Apr 17:05 pilotlog.txt
[2024-04-27 17:05:44] -rw------- 1 boinc boinc    742153 27. Apr 17:05 log.38204263._005584.job.log.1
[2024-04-27 17:05:44] -rw------- 1 boinc boinc       357 27. Apr 17:05 output.list
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc       620 27. Apr 17:05 runtime_log
[2024-04-27 17:05:44] -rw------- 1 boinc boinc   1044480 27. Apr 17:05 result.tar.gz
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc     11333 27. Apr 17:05 runtime_log.err
[2024-04-27 17:05:44] -rw------- 1 boinc boinc       632 27. Apr 17:05 HN5MDmrT9J5nsSi4apGgGQJmABFKDmABFKDmRLXKDm0FSKDmRPu0vn.diag
[2024-04-27 17:05:44] -rw-r--r-- 1 boinc boinc     20821 27. Apr 17:05 stderr.txt
[2024-04-27 17:05:44] HITS file was successfully produced:
[2024-04-27 17:05:44] -rw------- 1 boinc boinc 191757299 27. Apr 17:04 shared/HITS.pool.root.1
[2024-04-27 17:05:44]  *** Contents of shared directory: ***
[2024-04-27 17:05:44] insgesamt 696020
[2024-04-27 17:05:44] -rw-r--r-- 2 boinc boinc 519414320 27. Apr 14:55 ATLAS.root_0
[2024-04-27 17:05:44] -rw-r--r-- 2 boinc boinc    474817 27. Apr 14:55 input.tar.gz
[2024-04-27 17:05:44] -rw-r--r-- 2 boinc boinc     17537 27. Apr 14:55 start_atlas.sh
[2024-04-27 17:05:44] -rw------- 1 boinc boinc 191757299 27. Apr 17:04 HITS.pool.root.1
[2024-04-27 17:05:44] -rw------- 1 boinc boinc   1044480 27. Apr 17:05 result.tar.gz
17:05:45 (2994989): run_atlas exited; CPU time 29735.956755
17:05:45 (2994989): called boinc_finish(0)

</stderr_txt>
]]>

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