Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:20:12 (2676605): wrapper (7.7.26015): starting
18:20:12 (2676605): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 18:20:12] Arguments: --nthreads 4
[2024-04-27 18:20:12] Threads: 4
[2024-04-27 18:20:12] Checking for CVMFS
[2024-04-27 18:20:12] No cvmfs_config command found, will try listing directly
[2024-04-27 18:20:12] CVMFS is ok
[2024-04-27 18:20:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 18:20:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 18:20:12] Further information can be found at the LHC@home message board.
[2024-04-27 18:20:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 18:20:12] Checking for apptainer binary...
[2024-04-27 18:20:12] which: no apptainer in ((null))
[2024-04-27 18:20:12] apptainer is not installed, using version from CVMFS
[2024-04-27 18:20:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 18:20:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2024-04-27 18:20:13] apptainer works
[2024-04-27 18:20:14] Set ATHENA_PROC_NUMBER=4
[2024-04-27 18:20:14] Set ATHENA_CORE_NUMBER=4
[2024-04-27 18:20:14] Starting ATLAS job with PandaID=6185386704
[2024-04-27 18:20:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 22:28:13]  *** The last 200 lines of the pilot log: ***
[2024-04-27 22:28:13]  filesize=348346
[2024-04-27 22:28:13]  filetype=log
[2024-04-27 22:28:13]  guid=b9dc9229-b19d-43ed-b890-d11eab866311
[2024-04-27 22:28:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 22:28:13]  is_tar=False
[2024-04-27 22:28:13]  lfn=log.38204311._004220.job.log.tgz.1
[2024-04-27 22:28:13]  mtime=0
[2024-04-27 22:28:13]  protocol_id=None
[2024-04-27 22:28:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 22:28:13]  replicas=None
[2024-04-27 22:28:13]  scope=mc23_13p6TeV
[2024-04-27 22:28:13]  status=None
[2024-04-27 22:28:13]  status_code=0
[2024-04-27 22:28:13]  storage_token=
[2024-04-27 22:28:13]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185386704/log.38204311._004220.job.log.tgz.1
[2024-04-27 22:28:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/0d/log.38204311._004220.job.log.tgz.1
[2024-04-27 22:28:13]  workdir=None
[2024-04-27 22:28:13] ]
[2024-04-27 22:28:13] 2024-04-27 20:27:50,300 | INFO     | transferring file log.38204311._004220.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185386704/log.38204311._004220.job.log.tgz.1 to /scratch/b
[2024-04-27 22:28:13] 2024-04-27 20:27:50,300 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185386704/log.38204311._004220.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2024-04-27 22:28:13] 2024-04-27 20:27:50,314 | INFO     | adding to output.list: log.38204311._004220.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/0d/log.38204311._004220.job.log.tg
[2024-04-27 22:28:13] 2024-04-27 20:27:50,314 | INFO     | summary of transferred files:
[2024-04-27 22:28:13] 2024-04-27 20:27:50,314 | INFO     |  -- lfn=log.38204311._004220.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 22:28:13] 2024-04-27 20:27:50,314 | INFO     | stage-out finished correctly
[2024-04-27 22:28:13] 2024-04-27 20:27:50,481 | INFO     | monitor loop #1134: job 0:6185386704 is in state 'finished'
[2024-04-27 22:28:13] 2024-04-27 20:27:50,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 22:28:13] 2024-04-27 20:27:52,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 22:28:13] 2024-04-27 20:27:52,386 | INFO     | job 6185386704 has state=finished
[2024-04-27 22:28:13] 2024-04-27 20:27:52,387 | INFO     | preparing for final server update for job 6185386704 in state='finished'
[2024-04-27 22:28:13] 2024-04-27 20:27:52,393 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot
[2024-04-27 22:28:13] 2024-04-27 20:27:52,984 | INFO     | monitor loop #1135: job 0:6185386704 is in state 'finished'
[2024-04-27 22:28:13] 2024-04-27 20:27:52,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 22:28:13] 2024-04-27 20:27:53,910 | INFO     | this job has now completed (state=finished)
[2024-04-27 22:28:13] 2024-04-27 20:27:53,911 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 22:28:13] 2024-04-27 20:27:53,911 | INFO     | job 6185386704 has finished - writing final server update
[2024-04-27 22:28:13] 2024-04-27 20:27:53,911 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_97867/.job.ad'
[2024-04-27 22:28:13] 2024-04-27 20:27:53,912 | INFO     | total number of processed events: 400 (read)
[2024-04-27 22:28:13] 2024-04-27 20:27:53,914 | INFO     | executing command: lscpu
[2024-04-27 22:28:13] 2024-04-27 20:27:53,945 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-27 22:28:13] 2024-04-27 20:27:53,945 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 22:28:13] 2024-04-27 20:27:53,973 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 22:28:13] 2024-04-27 20:27:55,487 | INFO     | monitor loop #1136: job 0:6185386704 is in state 'finished'
[2024-04-27 22:28:13] 2024-04-27 20:27:55,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,385 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 22:28:13] 2024-04-27 20:27:57,385 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185386704/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,386 | INFO     | extracted standard info from prmon json
[2024-04-27 22:28:13] 2024-04-27 20:27:57,386 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 22:28:13] 2024-04-27 20:27:57,387 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 22:28:13] 2024-04-27 20:27:57,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 22:28:13] 2024-04-27 20:27:57,389 | INFO     | fitting pss+swap vs Time
[2024-04-27 22:28:13] 2024-04-27 20:27:57,392 | INFO     | current chi2=3.6760709051490377 (change=-0.049390304143767216 %)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,392 | INFO     | right removable region: 237
[2024-04-27 22:28:13] 2024-04-27 20:27:57,393 | INFO     | current chi2=1.4347337668303812 (change=60.95172200865707 %)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,394 | INFO     | current chi2=0.07956597712794813 (change=94.45430372049263 %)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,395 | INFO     | current chi2=0.015987977834346745 (change=79.90601207770393 %)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,396 | INFO     | current chi2=0.015325566534436058 (change=4.143183752029214 %)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,397 | INFO     | left removable region: 40
[2024-04-27 22:28:13] 2024-04-27 20:27:57,397 | INFO     | current memory leak: -2.02 B/s (using 197 data points, chi2=0.01)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | ..............................
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | . Timing measurements:
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | . get job = 0 s
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | . initial setup = 1 s
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | . payload setup = 9 s
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | . stage-in = 0 s
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | . payload execution = 14813 s
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | . stage-out = 0 s
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | . log creation = 0 s
[2024-04-27 22:28:13] 2024-04-27 20:27:57,398 | INFO     | ..............................
[2024-04-27 22:28:13] 2024-04-27 20:27:57,454 | INFO     | 
[2024-04-27 22:28:13] 2024-04-27 20:27:57,454 | INFO     | job summary report
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | --------------------------------------------------
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | PanDA job id: 6185386704
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | task id: 38204311
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | errors: (none)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | pilot state: finished 
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | transexitcode: 0
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | exeerrorcode: 0
[2024-04-27 22:28:13] 2024-04-27 20:27:57,455 | INFO     | exeerrordiag: 
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | exitcode: 0
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | exitmsg: OK
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | cpuconsumptiontime: 56321 s
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | nevents: 400
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | neventsw: 0
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | pid: 2687730
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | pgrp: 2687730
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | corecount: 4
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | event service: False
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | sizes: {0: 2375445, 1: 2375644, 10: 2375850, 11: 2375878, 14826: 2406602, 14827: 2415584, 14829: 2415768, 14834: 2415938}
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | --------------------------------------------------
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | 
[2024-04-27 22:28:13] 2024-04-27 20:27:57,456 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-04-27 22:28:13] 2024-04-27 20:27:57,471 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,471 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,471 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,471 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 22:28:13] 2024-04-27 20:27:57,472 | INFO     | job 6185386704 has completed (purged errors)
[2024-04-27 22:28:13] 2024-04-27 20:27:57,473 | INFO     | overall cleanup function is called
[2024-04-27 22:28:13] 2024-04-27 20:27:58,479 | INFO     | --- collectZombieJob: --- 10, [2687730]
[2024-04-27 22:28:13] 2024-04-27 20:27:58,480 | INFO     | zombie collector waiting for pid 2687730
[2024-04-27 22:28:13] 2024-04-27 20:27:58,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 22:28:13] 2024-04-27 20:27:59,483 | INFO     | collected zombie processes
[2024-04-27 22:28:13] 2024-04-27 20:27:59,483 | INFO     | will now attempt to kill all subprocesses of pid=2687730
[2024-04-27 22:28:13] 2024-04-27 20:27:59,614 | INFO     | process IDs to be killed: [2687730] (in reverse order)
[2024-04-27 22:28:13] 2024-04-27 20:27:59,680 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 22:28:13] 2024-04-27 20:27:59,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 22:28:13] 2024-04-27 20:27:59,687 | INFO     | did not find any defunct processes belonging to 2687730
[2024-04-27 22:28:13] 2024-04-27 20:27:59,694 | INFO     | did not find any defunct processes belonging to 2687730
[2024-04-27 22:28:13] 2024-04-27 20:27:59,694 | INFO     | ready for new job
[2024-04-27 22:28:13] 2024-04-27 20:27:59,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 22:28:13] 2024-04-27 20:27:59,696 | INFO     | *************************************
[2024-04-27 22:28:13] 2024-04-27 20:27:59,696 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 22:28:13] 2024-04-27 20:27:59,697 | INFO     | *************************************
[2024-04-27 22:28:13] 2024-04-27 20:27:59,697 | INFO     | 
[2024-04-27 22:28:13] 2024-04-27 20:27:59,699 | INFO     | architecture information:
[2024-04-27 22:28:13] 2024-04-27 20:27:59,699 | INFO     | executing command: cat /etc/os-release
[2024-04-27 22:28:13] 2024-04-27 20:27:59,713 | INFO     | cat /etc/os-release:
[2024-04-27 22:28:13] NAME="CentOS Linux"
[2024-04-27 22:28:13] VERSION="7 (Core)"
[2024-04-27 22:28:13] ID="centos"
[2024-04-27 22:28:13] ID_LIKE="rhel fedora"
[2024-04-27 22:28:13] VERSION_ID="7"
[2024-04-27 22:28:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 22:28:13] ANSI_COLOR="0;31"
[2024-04-27 22:28:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 22:28:13] HOME_URL="https://www.centos.org/"
[2024-04-27 22:28:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 22:28:13] 
[2024-04-27 22:28:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 22:28:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 22:28:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 22:28:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 22:28:13] 
[2024-04-27 22:28:13] 2024-04-27 20:27:59,713 | INFO     | *************************************
[2024-04-27 22:28:13] 2024-04-27 20:28:00,215 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-04-27 22:28:13] 2024-04-27 20:28:00,231 | INFO     | sufficient remaining disk space (1635363323904 B)
[2024-04-27 22:28:13] 2024-04-27 20:28:00,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 22:28:13] 2024-04-27 20:28:00,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 22:28:13] 2024-04-27 20:28:00,497 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-27 22:28:13] 2024-04-27 20:28:00,498 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-27 22:28:13] 2024-04-27 20:28:00,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 22:28:13] 2024-04-27 20:28:00,498 | INFO     | will abort loop
[2024-04-27 22:28:13] 2024-04-27 20:28:00,534 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 22:28:13] 2024-04-27 20:28:00,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 22:28:13] 2024-04-27 20:28:00,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 22:28:13] 2024-04-27 20:28:00,540 | INFO     | all data control threads have been joined
[2024-04-27 22:28:13] 2024-04-27 20:28:00,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 22:28:13] 2024-04-27 20:28:01,237 | INFO     | [job] retrieve thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:01,268 | INFO     | all payload control threads have been joined
[2024-04-27 22:28:13] 2024-04-27 20:28:01,340 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:01,502 | INFO     | [job] job monitor thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:01,545 | INFO     | [data] control thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:01,739 | INFO     | [payload] validate_post thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:01,746 | INFO     | [data] copytool_in thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:01,827 | INFO     | all job control threads have been joined
[2024-04-27 22:28:13] 2024-04-27 20:28:02,272 | INFO     | [payload] control thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:02,396 | INFO     | [job] validate thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:02,398 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:02,458 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:02,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 22:28:13] 2024-04-27 20:28:02,695 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:02,829 | INFO     | [payload] failed_post thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:02,832 | INFO     | [job] control thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:02,888 | INFO     | [data] copytool_out thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:02,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 22:28:13] 2024-04-27 20:28:03,468 | INFO     | [job] queue monitor thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:06,900 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 22:28:13] 2024-04-27 20:28:07,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47193253786688)>', '<ExcThread(monitor, started 47193422919424)>']
[2024-04-27 22:28:13] 2024-04-27 20:28:07,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 22:28:13] 2024-04-27 20:28:07,563 | INFO     | [monitor] control thread has ended
[2024-04-27 22:28:13] 2024-04-27 20:28:12,560 | INFO     | all workflow threads have been joined
[2024-04-27 22:28:13] 2024-04-27 20:28:12,561 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 22:28:13] 2024-04-27 20:28:12,561 | INFO     | traces error code: 0
[2024-04-27 22:28:13] 2024-04-27 20:28:12,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 22:28:13] 2024-04-27 20:28:12,618 [wrapper] ==== pilot stdout END ====
[2024-04-27 22:28:13] 2024-04-27 20:28:12,620 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 22:28:13] 2024-04-27 20:28:12,622 [wrapper] pilotpid: 2680823
[2024-04-27 22:28:13] 2024-04-27 20:28:12,623 [wrapper] Pilot exit status: 0
[2024-04-27 22:28:13] 2024-04-27 20:28:12,631 [wrapper] pandaids: 6185386704
[2024-04-27 22:28:13] 2024-04-27 20:28:12,689 [wrapper] cleanup: SIGTERM to supervisor_pilot 3117339 2680824
[2024-04-27 22:28:13] 2024-04-27 20:28:12,691 [wrapper] Test setup, not cleaning
[2024-04-27 22:28:13] 2024-04-27 20:28:12,694 [wrapper] ==== wrapper stdout END ====
[2024-04-27 22:28:13] 2024-04-27 20:28:12,696 [wrapper] ==== wrapper stderr END ====
[2024-04-27 22:28:13] 2024-04-27 20:28:12,702 [wrapper] apfmon messages muted
[2024-04-27 22:28:13]  *** Error codes and diagnostics ***
[2024-04-27 22:28:13]     "exeErrorCode": 0,
[2024-04-27 22:28:13]     "exeErrorDiag": "",
[2024-04-27 22:28:13]     "pilotErrorCode": 0,
[2024-04-27 22:28:13]     "pilotErrorDiag": "",
[2024-04-27 22:28:13]  *** Listing of results directory ***
[2024-04-27 22:28:13] total 617288
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc    462745 Apr 25 02:48 pilot3.tar.gz
[2024-04-27 22:28:13] -rwx------ 1 boinc boinc     32211 Apr 25 03:14 runpilot2-wrapper.sh
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc      6720 Apr 25 03:14 queuedata.json
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc       100 Apr 27 18:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 22:28:13] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 18:20 run_atlas
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc       105 Apr 27 18:20 job.xml
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc      6455 Apr 27 18:20 init_data.xml
[2024-04-27 22:28:13] -rw-r--r-- 2 boinc boinc 454744439 Apr 27 18:20 EVNT.38204309._000193.pool.root.1
[2024-04-27 22:28:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 18:20 start_atlas.sh
[2024-04-27 22:28:13] drwxrwx--x 2 boinc boinc      4096 Apr 27 18:20 shared
[2024-04-27 22:28:13] -rw-r--r-- 2 boinc boinc    474795 Apr 27 18:20 input.tar.gz
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc         0 Apr 27 18:20 boinc_lockfile
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc      2607 Apr 27 18:20 pandaJob.out
[2024-04-27 22:28:13] -rw------- 1 boinc boinc       424 Apr 27 18:20 setup.sh.local
[2024-04-27 22:28:13] -rw------- 1 boinc boinc    997146 Apr 27 18:20 agis_schedconf.cvmfs.json
[2024-04-27 22:28:13] -rw------- 1 boinc boinc   1315307 Apr 27 18:20 cric_ddmendpoints.json
[2024-04-27 22:28:13] drwx------ 4 boinc boinc      4096 Apr 27 18:20 pilot3
[2024-04-27 22:28:13] -rw------- 1 boinc boinc        95 Apr 27 22:27 pilot_heartbeat.json
[2024-04-27 22:28:13] -rw------- 1 boinc boinc 170382493 Apr 27 22:27 HITS.38204311._004220.pool.root.1
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc       531 Apr 27 22:27 boinc_task_state.xml
[2024-04-27 22:28:13] -rw------- 1 boinc boinc      1049 Apr 27 22:27 memory_monitor_summary.json
[2024-04-27 22:28:13] -rw------- 1 boinc boinc         0 Apr 27 22:27 agis_ddmendpoints.agis.ALL.json
[2024-04-27 22:28:13] -rw------- 1 boinc boinc    348346 Apr 27 22:27 log.38204311._004220.job.log.tgz.1
[2024-04-27 22:28:13] -rw------- 1 boinc boinc      7744 Apr 27 22:27 heartbeat.json
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc      8192 Apr 27 22:28 boinc_mmap_file
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc        28 Apr 27 22:28 wrapper_checkpoint.txt
[2024-04-27 22:28:13] -rw------- 1 boinc boinc      4408 Apr 27 22:28 pilotlog.txt
[2024-04-27 22:28:13] -rw------- 1 boinc boinc   1394654 Apr 27 22:28 log.38204311._004220.job.log.1
[2024-04-27 22:28:13] -rw------- 1 boinc boinc       357 Apr 27 22:28 output.list
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc       620 Apr 27 22:28 runtime_log
[2024-04-27 22:28:13] -rw------- 1 boinc boinc   1761280 Apr 27 22:28 result.tar.gz
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc     11410 Apr 27 22:28 runtime_log.err
[2024-04-27 22:28:13] -rw------- 1 boinc boinc       659 Apr 27 22:28 jh0NDmUs2J5n9Rq4apoT9bVoABFKDmABFKDmtztZDmhnNKDmA9nyan.diag
[2024-04-27 22:28:13] -rw-r--r-- 1 boinc boinc     21419 Apr 27 22:28 stderr.txt
[2024-04-27 22:28:13] HITS file was successfully produced:
[2024-04-27 22:28:13] -rw------- 1 boinc boinc 170382493 Apr 27 22:27 shared/HITS.pool.root.1
[2024-04-27 22:28:13]  *** Contents of shared directory: ***
[2024-04-27 22:28:13] total 612692
[2024-04-27 22:28:13] -rw-r--r-- 2 boinc boinc 454744439 Apr 27 18:20 ATLAS.root_0
[2024-04-27 22:28:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 18:20 start_atlas.sh
[2024-04-27 22:28:13] -rw-r--r-- 2 boinc boinc    474795 Apr 27 18:20 input.tar.gz
[2024-04-27 22:28:13] -rw------- 1 boinc boinc 170382493 Apr 27 22:27 HITS.pool.root.1
[2024-04-27 22:28:13] -rw------- 1 boinc boinc   1761280 Apr 27 22:28 result.tar.gz
22:28:14 (2676605): run_atlas exited; CPU time 56082.813647
22:28:14 (2676605): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN