Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:00:51 (1435259): wrapper (7.7.26015): starting
02:00:51 (1435259): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 02:00:51] Arguments: --nthreads 4
[2024-04-27 02:00:51] Threads: 4
[2024-04-27 02:00:51] Checking for CVMFS
[2024-04-27 02:00:51] No cvmfs_config command found, will try listing directly
[2024-04-27 02:00:51] CVMFS is ok
[2024-04-27 02:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 02:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 02:00:51] Further information can be found at the LHC@home message board.
[2024-04-27 02:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 02:00:51] Checking for apptainer binary...
[2024-04-27 02:00:51] which: no apptainer in ((null))
[2024-04-27 02:00:51] apptainer is not installed, using version from CVMFS
[2024-04-27 02:00:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 02:00:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-04-27 02:00:52] apptainer works
[2024-04-27 02:00:52] Set ATHENA_PROC_NUMBER=4
[2024-04-27 02:00:52] Set ATHENA_CORE_NUMBER=4
[2024-04-27 02:00:52] Starting ATLAS job with PandaID=6185956403
[2024-04-27 02:00:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 05:55:01]  *** The last 200 lines of the pilot log: ***
[2024-04-27 05:55:01]  checksum={'adler32': 'a63c15c4'}
[2024-04-27 05:55:01]  dataset=mc23_13p6TeV.543342.MGPy8EG_A14N23LO_TT_tN1_1200_200_MS_LepBR.simul.log.e8551_e8528_s4159_tid38222182_00
[2024-04-27 05:55:01]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 05:55:01]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 05:55:01]  direct_access_lan=False
[2024-04-27 05:55:01]  direct_access_wan=False
[2024-04-27 05:55:01]  domain=
[2024-04-27 05:55:01]  filesize=320525
[2024-04-27 05:55:01]  filetype=log
[2024-04-27 05:55:01]  guid=7e55a634-918b-4e7c-a719-67e9322cd6f6
[2024-04-27 05:55:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 05:55:01]  is_tar=False
[2024-04-27 05:55:01]  lfn=log.38222182._000153.job.log.tgz.1
[2024-04-27 05:55:01]  mtime=0
[2024-04-27 05:55:01]  protocol_id=None
[2024-04-27 05:55:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 05:55:01]  replicas=None
[2024-04-27 05:55:01]  scope=mc23_13p6TeV
[2024-04-27 05:55:01]  status=None
[2024-04-27 05:55:01]  status_code=0
[2024-04-27 05:55:01]  storage_token=
[2024-04-27 05:55:01]  surl=/scratch/boinc/var/slot60/slots/1/PanDA_Pilot-6185956403/log.38222182._000153.job.log.tgz.1
[2024-04-27 05:55:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/ee/log.38222182._000153.job.log.tgz.1
[2024-04-27 05:55:01]  workdir=None
[2024-04-27 05:55:01] ]
[2024-04-27 05:55:01] 2024-04-27 03:54:32,883 | INFO     | transferring file log.38222182._000153.job.log.tgz.1 from /scratch/boinc/var/slot60/slots/1/PanDA_Pilot-6185956403/log.38222182._000153.job.log.tgz.1 to /scratch/b
[2024-04-27 05:55:01] 2024-04-27 03:54:32,884 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot60/slots/1/PanDA_Pilot-6185956403/log.38222182._000153.job.log.tgz.1 /scratch/boinc/var/slot60/slots/1/lo
[2024-04-27 05:55:01] 2024-04-27 03:54:32,912 | INFO     | adding to output.list: log.38222182._000153.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/ee/log.38222182._000153.job.log.tg
[2024-04-27 05:55:01] 2024-04-27 03:54:32,913 | INFO     | summary of transferred files:
[2024-04-27 05:55:01] 2024-04-27 03:54:32,913 | INFO     |  -- lfn=log.38222182._000153.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 05:55:01] 2024-04-27 03:54:32,913 | INFO     | stage-out finished correctly
[2024-04-27 05:55:01] 2024-04-27 03:54:32,977 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 05:55:01] 2024-04-27 03:54:35,162 | INFO     | job 6185956403 has state=finished
[2024-04-27 05:55:01] 2024-04-27 03:54:35,163 | INFO     | preparing for final server update for job 6185956403 in state='finished'
[2024-04-27 05:55:01] 2024-04-27 03:54:35,163 | INFO     | this job has now completed (state=finished)
[2024-04-27 05:55:01] 2024-04-27 03:54:35,163 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 05:55:01] 2024-04-27 03:54:35,163 | INFO     | job 6185956403 has finished - writing final server update
[2024-04-27 05:55:01] 2024-04-27 03:54:35,164 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_651030/.job.ad'
[2024-04-27 05:55:01] 2024-04-27 03:54:35,164 | INFO     | total number of processed events: 400 (read)
[2024-04-27 05:55:01] 2024-04-27 03:54:35,170 | INFO     | executing command: lscpu
[2024-04-27 05:55:01] 2024-04-27 03:54:35,219 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-27 05:55:01] 2024-04-27 03:54:35,220 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 05:55:01] 2024-04-27 03:54:35,266 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 05:55:01] 2024-04-27 03:54:39,613 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 05:55:01] 2024-04-27 03:54:39,614 | INFO     | using path: /scratch/boinc/var/slot60/slots/1/PanDA_Pilot-6185956403/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,620 | INFO     | extracted standard info from prmon json
[2024-04-27 05:55:01] 2024-04-27 03:54:39,620 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 05:55:01] 2024-04-27 03:54:39,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 05:55:01] 2024-04-27 03:54:39,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 05:55:01] 2024-04-27 03:54:39,623 | INFO     | fitting pss+swap vs Time
[2024-04-27 05:55:01] 2024-04-27 03:54:39,625 | INFO     | current chi2=4.096536887741667 (change=16.289949283846497 %)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,626 | INFO     | right removable region: 224
[2024-04-27 05:55:01] 2024-04-27 03:54:39,627 | INFO     | current chi2=2.399521520514001 (change=50.96734786453716 %)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,628 | INFO     | current chi2=0.8941116959109828 (change=62.737917194447355 %)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,629 | INFO     | current chi2=0.8352148024893326 (change=6.5871963973854575 %)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,629 | INFO     | left removable region: 30
[2024-04-27 05:55:01] 2024-04-27 03:54:39,630 | INFO     | current memory leak: 2.03 B/s (using 194 data points, chi2=0.00)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,630 | INFO     | ..............................
[2024-04-27 05:55:01] 2024-04-27 03:54:39,630 | INFO     | . Timing measurements:
[2024-04-27 05:55:01] 2024-04-27 03:54:39,630 | INFO     | . get job = 0 s
[2024-04-27 05:55:01] 2024-04-27 03:54:39,630 | INFO     | . initial setup = 1 s
[2024-04-27 05:55:01] 2024-04-27 03:54:39,630 | INFO     | . payload setup = 7 s
[2024-04-27 05:55:01] 2024-04-27 03:54:39,631 | INFO     | . stage-in = 0 s
[2024-04-27 05:55:01] 2024-04-27 03:54:39,631 | INFO     | . payload execution = 13978 s
[2024-04-27 05:55:01] 2024-04-27 03:54:39,631 | INFO     | . stage-out = 0 s
[2024-04-27 05:55:01] 2024-04-27 03:54:39,631 | INFO     | . log creation = 0 s
[2024-04-27 05:55:01] 2024-04-27 03:54:39,631 | INFO     | ..............................
[2024-04-27 05:55:01] 2024-04-27 03:54:39,696 | INFO     | 
[2024-04-27 05:55:01] 2024-04-27 03:54:39,696 | INFO     | job summary report
[2024-04-27 05:55:01] 2024-04-27 03:54:39,696 | INFO     | --------------------------------------------------
[2024-04-27 05:55:01] 2024-04-27 03:54:39,696 | INFO     | PanDA job id: 6185956403
[2024-04-27 05:55:01] 2024-04-27 03:54:39,696 | INFO     | task id: 38222182
[2024-04-27 05:55:01] 2024-04-27 03:54:39,696 | INFO     | errors: (none)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,696 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | pilot state: finished 
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | transexitcode: 0
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | exeerrorcode: 0
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | exeerrordiag: 
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | exitcode: 0
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | exitmsg: OK
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | cpuconsumptiontime: 53197 s
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | nevents: 400
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | neventsw: 0
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | pid: 1447535
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | pgrp: 1447535
[2024-04-27 05:55:01] 2024-04-27 03:54:39,697 | INFO     | corecount: 4
[2024-04-27 05:55:01] 2024-04-27 03:54:39,698 | INFO     | event service: False
[2024-04-27 05:55:01] 2024-04-27 03:54:39,698 | INFO     | sizes: {0: 2375652, 7: 2375858, 11: 2375886, 13989: 2406300, 13990: 2406299, 13991: 2415521, 13998: 2415635}
[2024-04-27 05:55:01] 2024-04-27 03:54:39,698 | INFO     | --------------------------------------------------
[2024-04-27 05:55:01] 2024-04-27 03:54:39,698 | INFO     | 
[2024-04-27 05:55:01] 2024-04-27 03:54:39,698 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-04-27 05:55:01] 2024-04-27 03:54:39,878 | WARNING  | process 1447535 is no longer using CPU - aborting
[2024-04-27 05:55:01] 2024-04-27 03:54:39,878 | INFO     | aborting job monitoring since job object (job id=6185956403) has expired
[2024-04-27 05:55:01] 2024-04-27 03:54:39,899 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,899 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,899 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,899 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,901 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,901 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 05:55:01] 2024-04-27 03:54:39,901 | INFO     | job 6185956403 has completed (purged errors)
[2024-04-27 05:55:01] 2024-04-27 03:54:39,901 | INFO     | overall cleanup function is called
[2024-04-27 05:55:01] 2024-04-27 03:54:40,909 | INFO     | --- collectZombieJob: --- 10, [1447535]
[2024-04-27 05:55:01] 2024-04-27 03:54:40,909 | INFO     | zombie collector waiting for pid 1447535
[2024-04-27 05:55:01] 2024-04-27 03:54:40,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 05:55:01] 2024-04-27 03:54:41,914 | INFO     | collected zombie processes
[2024-04-27 05:55:01] 2024-04-27 03:54:41,914 | INFO     | will now attempt to kill all subprocesses of pid=1447535
[2024-04-27 05:55:01] 2024-04-27 03:54:42,119 | INFO     | process IDs to be killed: [1447535] (in reverse order)
[2024-04-27 05:55:01] 2024-04-27 03:54:42,333 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 05:55:01] 2024-04-27 03:54:42,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 05:55:01] 2024-04-27 03:54:42,354 | INFO     | did not find any defunct processes belonging to 1447535
[2024-04-27 05:55:01] 2024-04-27 03:54:42,367 | INFO     | did not find any defunct processes belonging to 1447535
[2024-04-27 05:55:01] 2024-04-27 03:54:42,367 | INFO     | ready for new job
[2024-04-27 05:55:01] 2024-04-27 03:54:42,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 05:55:01] 2024-04-27 03:54:42,369 | INFO     | *************************************
[2024-04-27 05:55:01] 2024-04-27 03:54:42,369 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 05:55:01] 2024-04-27 03:54:42,369 | INFO     | *************************************
[2024-04-27 05:55:01] 2024-04-27 03:54:42,369 | INFO     | 
[2024-04-27 05:55:01] 2024-04-27 03:54:42,377 | INFO     | architecture information:
[2024-04-27 05:55:01] 2024-04-27 03:54:42,377 | INFO     | executing command: cat /etc/os-release
[2024-04-27 05:55:01] 2024-04-27 03:54:42,391 | INFO     | cat /etc/os-release:
[2024-04-27 05:55:01] NAME="CentOS Linux"
[2024-04-27 05:55:01] VERSION="7 (Core)"
[2024-04-27 05:55:01] ID="centos"
[2024-04-27 05:55:01] ID_LIKE="rhel fedora"
[2024-04-27 05:55:01] VERSION_ID="7"
[2024-04-27 05:55:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 05:55:01] ANSI_COLOR="0;31"
[2024-04-27 05:55:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 05:55:01] HOME_URL="https://www.centos.org/"
[2024-04-27 05:55:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 05:55:01] 
[2024-04-27 05:55:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 05:55:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 05:55:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 05:55:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 05:55:01] 
[2024-04-27 05:55:01] 2024-04-27 03:54:42,392 | INFO     | *************************************
[2024-04-27 05:55:01] 2024-04-27 03:54:42,894 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-04-27 05:55:01] 2024-04-27 03:54:42,913 | INFO     | sufficient remaining disk space (3149116997632 B)
[2024-04-27 05:55:01] 2024-04-27 03:54:42,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 05:55:01] 2024-04-27 03:54:42,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 05:55:01] 2024-04-27 03:54:43,021 | INFO     | all data control threads have been joined
[2024-04-27 05:55:01] 2024-04-27 03:54:43,240 | INFO     | all payload control threads have been joined
[2024-04-27 05:55:01] 2024-04-27 03:54:43,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 05:55:01] 2024-04-27 03:54:43,387 | INFO     | aborting loop
[2024-04-27 05:55:01] 2024-04-27 03:54:43,456 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 05:55:01] 2024-04-27 03:54:43,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 05:55:01] 2024-04-27 03:54:43,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 05:55:01] 2024-04-27 03:54:43,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 05:55:01] 2024-04-27 03:54:43,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 05:55:01] 2024-04-27 03:54:43,639 | INFO     | all job control threads have been joined
[2024-04-27 05:55:01] 2024-04-27 03:54:43,918 | INFO     | [job] retrieve thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:43,985 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,026 | INFO     | [data] control thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,245 | INFO     | [payload] control thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,295 | INFO     | [payload] validate_post thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,392 | INFO     | [job] job monitor thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,491 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,608 | INFO     | [data] copytool_in thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,645 | INFO     | [job] control thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 05:55:01] 2024-04-27 03:54:44,984 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:44,985 | INFO     | [job] validate thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:45,419 | INFO     | [payload] failed_post thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:45,498 | INFO     | [data] copytool_out thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:45,710 | INFO     | [job] queue monitor thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:47,563 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:53,519 | INFO     | job.realtimelogging is not enabled
[2024-04-27 05:55:01] 2024-04-27 03:54:54,524 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 05:55:01] 2024-04-27 03:54:55,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47438868911168)>', '<ExcThread(monitor, started 47439040145152)>']
[2024-04-27 05:55:01] 2024-04-27 03:54:55,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 05:55:01] 2024-04-27 03:54:55,511 | INFO     | [monitor] control thread has ended
[2024-04-27 05:55:01] 2024-04-27 03:55:00,517 | INFO     | all workflow threads have been joined
[2024-04-27 05:55:01] 2024-04-27 03:55:00,517 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 05:55:01] 2024-04-27 03:55:00,517 | INFO     | traces error code: 0
[2024-04-27 05:55:01] 2024-04-27 03:55:00,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 05:55:01] 2024-04-27 03:55:00,600 [wrapper] ==== pilot stdout END ====
[2024-04-27 05:55:01] 2024-04-27 03:55:00,604 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 05:55:01] 2024-04-27 03:55:00,606 [wrapper] pilotpid: 1439932
[2024-04-27 05:55:01] 2024-04-27 03:55:00,609 [wrapper] Pilot exit status: 0
[2024-04-27 05:55:01] 2024-04-27 03:55:00,619 [wrapper] pandaids: 6185956403
[2024-04-27 05:55:01] 2024-04-27 03:55:00,711 [wrapper] cleanup: SIGTERM to supervisor_pilot 2885772 1439933
[2024-04-27 05:55:01] 2024-04-27 03:55:00,713 [wrapper] Test setup, not cleaning
[2024-04-27 05:55:01] 2024-04-27 03:55:00,714 [wrapper] ==== wrapper stdout END ====
[2024-04-27 05:55:01] 2024-04-27 03:55:00,719 [wrapper] ==== wrapper stderr END ====
[2024-04-27 05:55:01] 2024-04-27 03:55:00,723 [wrapper] apfmon messages muted
[2024-04-27 05:55:01]  *** Error codes and diagnostics ***
[2024-04-27 05:55:01]     "exeErrorCode": 0,
[2024-04-27 05:55:01]     "exeErrorDiag": "",
[2024-04-27 05:55:01]     "pilotErrorCode": 0,
[2024-04-27 05:55:01]     "pilotErrorDiag": "",
[2024-04-27 05:55:01]  *** Listing of results directory ***
[2024-04-27 05:55:01] total 845480
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc    462745 Apr 25 06:49 pilot3.tar.gz
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc      6720 Apr 25 07:18 queuedata.json
[2024-04-27 05:55:01] -rwx------ 1 boinc boinc     32211 Apr 25 07:19 runpilot2-wrapper.sh
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc       100 Apr 27 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 05:55:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 02:00 run_atlas
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc       105 Apr 27 02:00 job.xml
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc      6643 Apr 27 02:00 init_data.xml
[2024-04-27 05:55:01] -rw-r--r-- 2 boinc boinc 572514612 Apr 27 02:00 EVNT.38222176._000007.pool.root.1
[2024-04-27 05:55:01] -rw-r--r-- 2 boinc boinc     17537 Apr 27 02:00 start_atlas.sh
[2024-04-27 05:55:01] drwxrwx--x 2 boinc boinc      4096 Apr 27 02:00 shared
[2024-04-27 05:55:01] -rw-r--r-- 2 boinc boinc    474797 Apr 27 02:00 input.tar.gz
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc         0 Apr 27 02:00 boinc_lockfile
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc      2600 Apr 27 02:00 pandaJob.out
[2024-04-27 05:55:01] -rw------- 1 boinc boinc       424 Apr 27 02:00 setup.sh.local
[2024-04-27 05:55:01] -rw------- 1 boinc boinc    997383 Apr 27 02:01 agis_schedconf.cvmfs.json
[2024-04-27 05:55:01] -rw------- 1 boinc boinc   1315307 Apr 27 02:01 cric_ddmendpoints.json
[2024-04-27 05:55:01] drwx------ 4 boinc boinc      4096 Apr 27 02:01 pilot3
[2024-04-27 05:55:01] -rw------- 1 boinc boinc        95 Apr 27 05:53 pilot_heartbeat.json
[2024-04-27 05:55:01] -rw------- 1 boinc boinc 286504439 Apr 27 05:53 HITS.38222182._000153.pool.root.1
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc       532 Apr 27 05:54 boinc_task_state.xml
[2024-04-27 05:55:01] -rw------- 1 boinc boinc      1045 Apr 27 05:54 memory_monitor_summary.json
[2024-04-27 05:55:01] -rw------- 1 boinc boinc         0 Apr 27 05:54 agis_ddmendpoints.agis.ALL.json
[2024-04-27 05:55:01] -rw------- 1 boinc boinc    320525 Apr 27 05:54 log.38222182._000153.job.log.tgz.1
[2024-04-27 05:55:01] -rw------- 1 boinc boinc      7690 Apr 27 05:54 heartbeat.json
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc      8192 Apr 27 05:54 boinc_mmap_file
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc        28 Apr 27 05:55 wrapper_checkpoint.txt
[2024-04-27 05:55:01] -rw------- 1 boinc boinc      4294 Apr 27 05:55 pilotlog.txt
[2024-04-27 05:55:01] -rw------- 1 boinc boinc   1307135 Apr 27 05:55 log.38222182._000153.job.log.1
[2024-04-27 05:55:01] -rw------- 1 boinc boinc       357 Apr 27 05:55 output.list
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc       620 Apr 27 05:55 runtime_log
[2024-04-27 05:55:01] -rw------- 1 boinc boinc   1648640 Apr 27 05:55 result.tar.gz
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc     11410 Apr 27 05:55 runtime_log.err
[2024-04-27 05:55:01] -rw------- 1 boinc boinc       658 Apr 27 05:55 ai4NDmVh6J5n9Rq4apoT9bVoABFKDmABFKDmtztZDm1xNKDmnRrDjn.diag
[2024-04-27 05:55:01] -rw-r--r-- 1 boinc boinc     20818 Apr 27 05:55 stderr.txt
[2024-04-27 05:55:01] HITS file was successfully produced:
[2024-04-27 05:55:01] -rw------- 1 boinc boinc 286504439 Apr 27 05:53 shared/HITS.pool.root.1
[2024-04-27 05:55:01]  *** Contents of shared directory: ***
[2024-04-27 05:55:01] total 840996
[2024-04-27 05:55:01] -rw-r--r-- 2 boinc boinc 572514612 Apr 27 02:00 ATLAS.root_0
[2024-04-27 05:55:01] -rw-r--r-- 2 boinc boinc     17537 Apr 27 02:00 start_atlas.sh
[2024-04-27 05:55:01] -rw-r--r-- 2 boinc boinc    474797 Apr 27 02:00 input.tar.gz
[2024-04-27 05:55:01] -rw------- 1 boinc boinc 286504439 Apr 27 05:53 HITS.pool.root.1
[2024-04-27 05:55:01] -rw------- 1 boinc boinc   1648640 Apr 27 05:55 result.tar.gz
05:55:03 (1435259): run_atlas exited; CPU time 52875.066531
05:55:03 (1435259): called boinc_finish(0)

</stderr_txt>
]]>

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