Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:59 (605955): wrapper (7.7.26015): starting
01:19:59 (605955): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 01:19:59] Arguments: --nthreads 4
[2024-04-27 01:19:59] Threads: 4
[2024-04-27 01:19:59] Checking for CVMFS
[2024-04-27 01:19:59] No cvmfs_config command found, will try listing directly
[2024-04-27 01:19:59] CVMFS is ok
[2024-04-27 01:19:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 01:19:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 01:19:59] Further information can be found at the LHC@home message board.
[2024-04-27 01:19:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 01:19:59] Checking for apptainer binary...
[2024-04-27 01:19:59] which: no apptainer in ((null))
[2024-04-27 01:19:59] apptainer is not installed, using version from CVMFS
[2024-04-27 01:19:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 01:20:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-04-27 01:20:00] apptainer works
[2024-04-27 01:20:00] Set ATHENA_PROC_NUMBER=4
[2024-04-27 01:20:00] Set ATHENA_CORE_NUMBER=4
[2024-04-27 01:20:00] Starting ATLAS job with PandaID=6185898692
[2024-04-27 01:20:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 04:21:04]  *** The last 200 lines of the pilot log: ***
[2024-04-27 04:21:04]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 04:21:04]  direct_access_lan=False
[2024-04-27 04:21:04]  direct_access_wan=False
[2024-04-27 04:21:04]  domain=
[2024-04-27 04:21:04]  filesize=315327
[2024-04-27 04:21:04]  filetype=log
[2024-04-27 04:21:04]  guid=b5afb61d-7a7c-4704-8c83-7de1d2f4e967
[2024-04-27 04:21:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 04:21:04]  is_tar=False
[2024-04-27 04:21:04]  lfn=log.38204279._025838.job.log.tgz.1
[2024-04-27 04:21:04]  mtime=0
[2024-04-27 04:21:04]  protocol_id=None
[2024-04-27 04:21:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 04:21:04]  replicas=None
[2024-04-27 04:21:04]  scope=mc23_13p6TeV
[2024-04-27 04:21:04]  status=None
[2024-04-27 04:21:04]  status_code=0
[2024-04-27 04:21:04]  storage_token=
[2024-04-27 04:21:04]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185898692/log.38204279._025838.job.log.tgz.1
[2024-04-27 04:21:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/c3/log.38204279._025838.job.log.tgz.1
[2024-04-27 04:21:04]  workdir=None
[2024-04-27 04:21:04] ]
[2024-04-27 04:21:04] 2024-04-27 02:20:38,283 | INFO     | monitor loop #837: job 0:6185898692 is in state 'stageout'
[2024-04-27 04:21:04] 2024-04-27 02:20:38,294 | WARNING  | aborting job monitor tasks since payload process 617528 is not running
[2024-04-27 04:21:04] 2024-04-27 02:20:38,297 | INFO     | will not send any job update
[2024-04-27 04:21:04] 2024-04-27 02:20:38,297 | INFO     | transferring file log.38204279._025838.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185898692/log.38204279._025838.job.log.tgz.1 to /scratch/b
[2024-04-27 04:21:04] 2024-04-27 02:20:38,297 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185898692/log.38204279._025838.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2024-04-27 04:21:04] 2024-04-27 02:20:38,312 | INFO     | adding to output.list: log.38204279._025838.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/c3/log.38204279._025838.job.log.tg
[2024-04-27 04:21:04] 2024-04-27 02:20:38,312 | INFO     | summary of transferred files:
[2024-04-27 04:21:04] 2024-04-27 02:20:38,313 | INFO     |  -- lfn=log.38204279._025838.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 04:21:04] 2024-04-27 02:20:38,313 | INFO     | stage-out finished correctly
[2024-04-27 04:21:04] 2024-04-27 02:20:38,364 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 04:21:04] 2024-04-27 02:20:38,548 | INFO     | job 6185898692 has state=finished
[2024-04-27 04:21:04] 2024-04-27 02:20:38,548 | INFO     | preparing for final server update for job 6185898692 in state='finished'
[2024-04-27 04:21:04] 2024-04-27 02:20:38,548 | INFO     | this job has now completed (state=finished)
[2024-04-27 04:21:04] 2024-04-27 02:20:38,549 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 04:21:04] 2024-04-27 02:20:38,549 | INFO     | job 6185898692 has finished - writing final server update
[2024-04-27 04:21:04] 2024-04-27 02:20:38,549 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3165612/.job.ad'
[2024-04-27 04:21:04] 2024-04-27 02:20:38,549 | INFO     | total number of processed events: 400 (read)
[2024-04-27 04:21:04] 2024-04-27 02:20:38,553 | INFO     | executing command: lscpu
[2024-04-27 04:21:04] 2024-04-27 02:20:38,598 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-27 04:21:04] 2024-04-27 02:20:38,599 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 04:21:04] 2024-04-27 02:20:38,626 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 04:21:04] 2024-04-27 02:20:40,799 | INFO     | monitor loop #838: job 0:6185898692 is in state 'finished'
[2024-04-27 04:21:04] 2024-04-27 02:20:40,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,468 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-27 04:21:04] 2024-04-27 02:20:41,468 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185898692/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,469 | INFO     | extracted standard info from prmon json
[2024-04-27 04:21:04] 2024-04-27 02:20:41,469 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 04:21:04] 2024-04-27 02:20:41,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 04:21:04] 2024-04-27 02:20:41,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 04:21:04] 2024-04-27 02:20:41,471 | INFO     | fitting pss+swap vs Time
[2024-04-27 04:21:04] 2024-04-27 02:20:41,473 | INFO     | current chi2=3.7862999298371216 (change=16.588383521693967 %)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,473 | INFO     | right removable region: 172
[2024-04-27 04:21:04] 2024-04-27 02:20:41,473 | INFO     | current chi2=2.2350114063279136 (change=50.76303575948275 %)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,474 | INFO     | current chi2=0.876046522481755 (change=60.80348762420481 %)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,475 | INFO     | current chi2=0.8244065868488138 (change=5.894656768529847 %)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,475 | INFO     | left removable region: 30
[2024-04-27 04:21:04] 2024-04-27 02:20:41,475 | INFO     | current memory leak: -8.69 B/s (using 142 data points, chi2=0.03)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | ..............................
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | . Timing measurements:
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | . get job = 0 s
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | . initial setup = 1 s
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | . payload setup = 4 s
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | . stage-in = 0 s
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | . payload execution = 10806 s
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | . stage-out = 0 s
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | . log creation = 0 s
[2024-04-27 04:21:04] 2024-04-27 02:20:41,476 | INFO     | ..............................
[2024-04-27 04:21:04] 2024-04-27 02:20:41,529 | INFO     | 
[2024-04-27 04:21:04] 2024-04-27 02:20:41,529 | INFO     | job summary report
[2024-04-27 04:21:04] 2024-04-27 02:20:41,529 | INFO     | --------------------------------------------------
[2024-04-27 04:21:04] 2024-04-27 02:20:41,529 | INFO     | PanDA job id: 6185898692
[2024-04-27 04:21:04] 2024-04-27 02:20:41,529 | INFO     | task id: 38204279
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | errors: (none)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | pilot state: finished 
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | transexitcode: 0
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | exeerrorcode: 0
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | exeerrordiag: 
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | exitcode: 0
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | exitmsg: OK
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | cpuconsumptiontime: 40552 s
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | nevents: 400
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | neventsw: 0
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | pid: 617528
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | pgrp: 617528
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | corecount: 4
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | event service: False
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | sizes: {0: 2375640, 3: 2375846, 11: 2375874, 10814: 2404924, 10815: 2413961, 10818: 2414075}
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | --------------------------------------------------
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | 
[2024-04-27 04:21:04] 2024-04-27 02:20:41,530 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | job 6185898692 has completed (purged errors)
[2024-04-27 04:21:04] 2024-04-27 02:20:41,550 | INFO     | overall cleanup function is called
[2024-04-27 04:21:04] 2024-04-27 02:20:42,554 | INFO     | --- collectZombieJob: --- 10, [617528]
[2024-04-27 04:21:04] 2024-04-27 02:20:42,554 | INFO     | zombie collector waiting for pid 617528
[2024-04-27 04:21:04] 2024-04-27 02:20:42,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 04:21:04] 2024-04-27 02:20:43,558 | INFO     | collected zombie processes
[2024-04-27 04:21:04] 2024-04-27 02:20:43,558 | INFO     | will now attempt to kill all subprocesses of pid=617528
[2024-04-27 04:21:04] 2024-04-27 02:20:43,697 | INFO     | process IDs to be killed: [617528] (in reverse order)
[2024-04-27 04:21:04] 2024-04-27 02:20:43,810 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 04:21:04] 2024-04-27 02:20:43,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 04:21:04] 2024-04-27 02:20:43,816 | INFO     | did not find any defunct processes belonging to 617528
[2024-04-27 04:21:04] 2024-04-27 02:20:43,821 | INFO     | did not find any defunct processes belonging to 617528
[2024-04-27 04:21:04] 2024-04-27 02:20:43,822 | INFO     | ready for new job
[2024-04-27 04:21:04] 2024-04-27 02:20:43,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 04:21:04] 2024-04-27 02:20:43,823 | INFO     | *************************************
[2024-04-27 04:21:04] 2024-04-27 02:20:43,823 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 04:21:04] 2024-04-27 02:20:43,823 | INFO     | *************************************
[2024-04-27 04:21:04] 2024-04-27 02:20:43,823 | INFO     | 
[2024-04-27 04:21:04] 2024-04-27 02:20:43,826 | INFO     | architecture information:
[2024-04-27 04:21:04] 2024-04-27 02:20:43,826 | INFO     | executing command: cat /etc/os-release
[2024-04-27 04:21:04] 2024-04-27 02:20:43,840 | INFO     | cat /etc/os-release:
[2024-04-27 04:21:04] NAME="CentOS Linux"
[2024-04-27 04:21:04] VERSION="7 (Core)"
[2024-04-27 04:21:04] ID="centos"
[2024-04-27 04:21:04] ID_LIKE="rhel fedora"
[2024-04-27 04:21:04] VERSION_ID="7"
[2024-04-27 04:21:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 04:21:04] ANSI_COLOR="0;31"
[2024-04-27 04:21:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 04:21:04] HOME_URL="https://www.centos.org/"
[2024-04-27 04:21:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 04:21:04] 
[2024-04-27 04:21:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 04:21:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 04:21:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 04:21:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 04:21:04] 
[2024-04-27 04:21:04] 2024-04-27 02:20:43,840 | INFO     | *************************************
[2024-04-27 04:21:04] 2024-04-27 02:20:44,343 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-04-27 04:21:04] 2024-04-27 02:20:44,362 | INFO     | sufficient remaining disk space (610416984064 B)
[2024-04-27 04:21:04] 2024-04-27 02:20:44,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 04:21:04] 2024-04-27 02:20:44,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 04:21:04] 2024-04-27 02:20:44,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 04:21:04] 2024-04-27 02:20:44,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 04:21:04] 2024-04-27 02:20:44,363 | INFO     | aborting loop
[2024-04-27 04:21:04] 2024-04-27 02:20:44,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 04:21:04] 2024-04-27 02:20:44,696 | INFO     | all job control threads have been joined
[2024-04-27 04:21:04] 2024-04-27 02:20:44,705 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 04:21:04] 2024-04-27 02:20:44,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 04:21:04] 2024-04-27 02:20:44,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 04:21:04] 2024-04-27 02:20:44,719 | INFO     | all data control threads have been joined
[2024-04-27 04:21:04] 2024-04-27 02:20:45,291 | INFO     | all payload control threads have been joined
[2024-04-27 04:21:04] 2024-04-27 02:20:45,368 | INFO     | [job] job monitor thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:45,368 | INFO     | [job] retrieve thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:45,395 | INFO     | [data] copytool_in thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:45,701 | INFO     | [job] control thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:45,723 | INFO     | [data] control thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:45,920 | INFO     | [payload] failed_post thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:46,083 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:46,294 | INFO     | [payload] control thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:46,364 | INFO     | [data] copytool_out thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:46,485 | INFO     | [job] validate thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:46,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 04:21:04] 2024-04-27 02:20:46,540 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:46,627 | INFO     | [payload] validate_post thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:46,781 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:47,544 | INFO     | [job] queue monitor thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:48,437 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:55,181 | INFO     | job.realtimelogging is not enabled
[2024-04-27 04:21:04] 2024-04-27 02:20:56,187 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 04:21:04] 2024-04-27 02:20:58,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47746041738304)>', '<ExcThread(monitor, started 47746210871040)>']
[2024-04-27 04:21:04] 2024-04-27 02:20:58,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 04:21:04] 2024-04-27 02:20:58,767 | INFO     | [monitor] control thread has ended
[2024-04-27 04:21:04] 2024-04-27 02:21:03,138 | INFO     | all workflow threads have been joined
[2024-04-27 04:21:04] 2024-04-27 02:21:03,138 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 04:21:04] 2024-04-27 02:21:03,138 | INFO     | traces error code: 0
[2024-04-27 04:21:04] 2024-04-27 02:21:03,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 04:21:04] 2024-04-27 02:21:03,217 [wrapper] ==== pilot stdout END ====
[2024-04-27 04:21:04] 2024-04-27 02:21:03,219 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 04:21:04] 2024-04-27 02:21:03,221 [wrapper] pilotpid: 610519
[2024-04-27 04:21:04] 2024-04-27 02:21:03,223 [wrapper] Pilot exit status: 0
[2024-04-27 04:21:04] 2024-04-27 02:21:03,229 [wrapper] pandaids: 6185898692
[2024-04-27 04:21:04] 2024-04-27 02:21:03,287 [wrapper] cleanup: SIGTERM to supervisor_pilot 1125398 610520
[2024-04-27 04:21:04] 2024-04-27 02:21:03,289 [wrapper] Test setup, not cleaning
[2024-04-27 04:21:04] 2024-04-27 02:21:03,291 [wrapper] ==== wrapper stdout END ====
[2024-04-27 04:21:04] 2024-04-27 02:21:03,292 [wrapper] ==== wrapper stderr END ====
[2024-04-27 04:21:04] 2024-04-27 02:21:03,296 [wrapper] apfmon messages muted
[2024-04-27 04:21:04]  *** Error codes and diagnostics ***
[2024-04-27 04:21:04]     "exeErrorCode": 0,
[2024-04-27 04:21:04]     "exeErrorDiag": "",
[2024-04-27 04:21:04]     "pilotErrorCode": 0,
[2024-04-27 04:21:04]     "pilotErrorDiag": "",
[2024-04-27 04:21:04]  *** Listing of results directory ***
[2024-04-27 04:21:04] total 617220
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc    462745 Apr 25 06:15 pilot3.tar.gz
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc      6720 Apr 25 06:20 queuedata.json
[2024-04-27 04:21:04] -rwx------ 1 boinc boinc     32211 Apr 25 06:21 runpilot2-wrapper.sh
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc       100 Apr 27 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 04:21:04] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 01:19 run_atlas
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc       105 Apr 27 01:19 job.xml
[2024-04-27 04:21:04] -rw-r--r-- 2 boinc boinc 451287986 Apr 27 01:19 EVNT.38204277._000799.pool.root.1
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc      6663 Apr 27 01:19 init_data.xml
[2024-04-27 04:21:04] -rw-r--r-- 2 boinc boinc     17537 Apr 27 01:19 start_atlas.sh
[2024-04-27 04:21:04] drwxrwx--x 2 boinc boinc      4096 Apr 27 01:19 shared
[2024-04-27 04:21:04] -rw-r--r-- 2 boinc boinc    474803 Apr 27 01:19 input.tar.gz
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc         0 Apr 27 01:19 boinc_lockfile
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc      2583 Apr 27 01:20 pandaJob.out
[2024-04-27 04:21:04] -rw------- 1 boinc boinc       424 Apr 27 01:20 setup.sh.local
[2024-04-27 04:21:04] -rw------- 1 boinc boinc    997383 Apr 27 01:20 agis_schedconf.cvmfs.json
[2024-04-27 04:21:04] -rw------- 1 boinc boinc   1315307 Apr 27 01:20 cric_ddmendpoints.json
[2024-04-27 04:21:04] drwx------ 4 boinc boinc      4096 Apr 27 01:20 pilot3
[2024-04-27 04:21:04] -rw------- 1 boinc boinc 174558115 Apr 27 04:20 HITS.38204279._025838.pool.root.1
[2024-04-27 04:21:04] -rw------- 1 boinc boinc      1051 Apr 27 04:20 memory_monitor_summary.json
[2024-04-27 04:21:04] -rw------- 1 boinc boinc        95 Apr 27 04:20 pilot_heartbeat.json
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc       531 Apr 27 04:20 boinc_task_state.xml
[2024-04-27 04:21:04] -rw------- 1 boinc boinc         0 Apr 27 04:20 agis_ddmendpoints.agis.ALL.json
[2024-04-27 04:21:04] -rw------- 1 boinc boinc    315327 Apr 27 04:20 log.38204279._025838.job.log.tgz.1
[2024-04-27 04:21:04] -rw------- 1 boinc boinc      7747 Apr 27 04:20 heartbeat.json
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc      8192 Apr 27 04:20 boinc_mmap_file
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc        28 Apr 27 04:20 wrapper_checkpoint.txt
[2024-04-27 04:21:04] -rw------- 1 boinc boinc      4293 Apr 27 04:21 pilotlog.txt
[2024-04-27 04:21:04] -rw------- 1 boinc boinc   1035494 Apr 27 04:21 log.38204279._025838.job.log.1
[2024-04-27 04:21:04] -rw------- 1 boinc boinc       357 Apr 27 04:21 output.list
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc       620 Apr 27 04:21 runtime_log
[2024-04-27 04:21:04] -rw------- 1 boinc boinc   1372160 Apr 27 04:21 result.tar.gz
[2024-04-27 04:21:04] -rw------- 1 boinc boinc       657 Apr 27 04:21 uJ7MDmrm5J5nsSi4apGgGQJmABFKDmABFKDmRLXKDmd0RKDmosepjn.diag
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc     11410 Apr 27 04:21 runtime_log.err
[2024-04-27 04:21:04] -rw-r--r-- 1 boinc boinc     20887 Apr 27 04:21 stderr.txt
[2024-04-27 04:21:04] HITS file was successfully produced:
[2024-04-27 04:21:04] -rw------- 1 boinc boinc 174558115 Apr 27 04:20 shared/HITS.pool.root.1
[2024-04-27 04:21:04]  *** Contents of shared directory: ***
[2024-04-27 04:21:04] total 613012
[2024-04-27 04:21:04] -rw-r--r-- 2 boinc boinc 451287986 Apr 27 01:19 ATLAS.root_0
[2024-04-27 04:21:04] -rw-r--r-- 2 boinc boinc     17537 Apr 27 01:19 start_atlas.sh
[2024-04-27 04:21:04] -rw-r--r-- 2 boinc boinc    474803 Apr 27 01:19 input.tar.gz
[2024-04-27 04:21:04] -rw------- 1 boinc boinc 174558115 Apr 27 04:20 HITS.pool.root.1
[2024-04-27 04:21:04] -rw------- 1 boinc boinc   1372160 Apr 27 04:21 result.tar.gz
04:21:05 (605955): run_atlas exited; CPU time 40320.649007
04:21:05 (605955): called boinc_finish(0)

</stderr_txt>
]]>

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