Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:16:40 (2271178): wrapper (7.7.26015): starting
14:16:40 (2271178): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 14:16:40] Arguments: --nthreads 4
[2024-04-27 14:16:40] Threads: 4
[2024-04-27 14:16:40] Checking for CVMFS
[2024-04-27 14:16:40] No cvmfs_config command found, will try listing directly
[2024-04-27 14:16:40] CVMFS is ok
[2024-04-27 14:16:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 14:16:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 14:16:40] Further information can be found at the LHC@home message board.
[2024-04-27 14:16:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 14:16:40] Checking for apptainer binary...
[2024-04-27 14:16:40] which: no apptainer in ((null))
[2024-04-27 14:16:40] apptainer is not installed, using version from CVMFS
[2024-04-27 14:16:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 14:16:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2024-04-27 14:16:41] apptainer works
[2024-04-27 14:16:41] Set ATHENA_PROC_NUMBER=4
[2024-04-27 14:16:41] Set ATHENA_CORE_NUMBER=4
[2024-04-27 14:16:41] Starting ATLAS job with PandaID=6185781559
[2024-04-27 14:16:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 18:20:01]  *** The last 200 lines of the pilot log: ***
[2024-04-27 18:20:01]  domain=
[2024-04-27 18:20:01]  filesize=334456
[2024-04-27 18:20:01]  filetype=log
[2024-04-27 18:20:01]  guid=86212bef-abaa-4e0d-a435-2b39f52fca6c
[2024-04-27 18:20:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 18:20:01]  is_tar=False
[2024-04-27 18:20:01]  lfn=log.38207243._001442.job.log.tgz.1
[2024-04-27 18:20:01]  mtime=0
[2024-04-27 18:20:01]  protocol_id=None
[2024-04-27 18:20:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 18:20:01]  replicas=None
[2024-04-27 18:20:01]  scope=mc23_13p6TeV
[2024-04-27 18:20:01]  status=None
[2024-04-27 18:20:01]  status_code=0
[2024-04-27 18:20:01]  storage_token=
[2024-04-27 18:20:01]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185781559/log.38207243._001442.job.log.tgz.1
[2024-04-27 18:20:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/94/log.38207243._001442.job.log.tgz.1
[2024-04-27 18:20:01]  workdir=None
[2024-04-27 18:20:01] ]
[2024-04-27 18:20:01] 2024-04-27 16:19:29,237 | INFO     | transferring file log.38207243._001442.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185781559/log.38207243._001442.job.log.tgz.1 to /scratch/b
[2024-04-27 18:20:01] 2024-04-27 16:19:29,238 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185781559/log.38207243._001442.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2024-04-27 18:20:01] 2024-04-27 16:19:29,253 | INFO     | adding to output.list: log.38207243._001442.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/94/log.38207243._001442.job.log.tg
[2024-04-27 18:20:01] 2024-04-27 16:19:29,254 | INFO     | summary of transferred files:
[2024-04-27 18:20:01] 2024-04-27 16:19:29,254 | INFO     |  -- lfn=log.38207243._001442.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 18:20:01] 2024-04-27 16:19:29,255 | INFO     | stage-out finished correctly
[2024-04-27 18:20:01] 2024-04-27 16:19:32,006 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 18:20:01] 2024-04-27 16:19:32,299 | WARNING  | process 2282243 is no longer using CPU - aborting
[2024-04-27 18:20:01] 2024-04-27 16:19:32,300 | INFO     | will not send any job update
[2024-04-27 18:20:01] 2024-04-27 16:19:33,934 | INFO     | job 6185781559 has state=finished
[2024-04-27 18:20:01] 2024-04-27 16:19:33,934 | INFO     | preparing for final server update for job 6185781559 in state='finished'
[2024-04-27 18:20:01] 2024-04-27 16:19:33,935 | INFO     | this job has now completed (state=finished)
[2024-04-27 18:20:01] 2024-04-27 16:19:33,935 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 18:20:01] 2024-04-27 16:19:33,935 | INFO     | job 6185781559 has finished - writing final server update
[2024-04-27 18:20:01] 2024-04-27 16:19:33,935 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_97867/.job.ad'
[2024-04-27 18:20:01] 2024-04-27 16:19:33,935 | INFO     | total number of processed events: 400 (read)
[2024-04-27 18:20:01] 2024-04-27 16:19:33,939 | INFO     | executing command: lscpu
[2024-04-27 18:20:01] 2024-04-27 16:19:33,983 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-27 18:20:01] 2024-04-27 16:19:33,983 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 18:20:01] 2024-04-27 16:19:34,022 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 18:20:01] 2024-04-27 16:19:34,805 | INFO     | monitor loop #1109: job 0:6185781559 is in state 'finished'
[2024-04-27 18:20:01] 2024-04-27 16:19:34,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 18:20:01] 2024-04-27 16:19:37,313 | INFO     | monitor loop #1110: job 0:6185781559 is in state 'finished'
[2024-04-27 18:20:01] 2024-04-27 16:19:37,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 18:20:01] 2024-04-27 16:19:38,674 | INFO     | 14569s have passed since pilot start
[2024-04-27 18:20:01] 2024-04-27 16:19:39,427 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 18:20:01] 2024-04-27 16:19:39,427 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185781559/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,428 | INFO     | extracted standard info from prmon json
[2024-04-27 18:20:01] 2024-04-27 16:19:39,429 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 18:20:01] 2024-04-27 16:19:39,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 18:20:01] 2024-04-27 16:19:39,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 18:20:01] 2024-04-27 16:19:39,434 | INFO     | fitting pss+swap vs Time
[2024-04-27 18:20:01] 2024-04-27 16:19:39,439 | INFO     | current chi2=3.7014439943639883 (change=16.45298931872289 %)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,439 | INFO     | right removable region: 233
[2024-04-27 18:20:01] 2024-04-27 16:19:39,441 | INFO     | current chi2=2.1375373282153145 (change=51.75265267718328 %)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,443 | INFO     | current chi2=0.9441086426245662 (change=55.83194594253813 %)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,445 | INFO     | current chi2=0.8864990127465716 (change=6.102012763895816 %)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,445 | INFO     | left removable region: 30
[2024-04-27 18:20:01] 2024-04-27 16:19:39,447 | INFO     | current memory leak: -7.80 B/s (using 203 data points, chi2=0.07)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,448 | INFO     | ..............................
[2024-04-27 18:20:01] 2024-04-27 16:19:39,448 | INFO     | . Timing measurements:
[2024-04-27 18:20:01] 2024-04-27 16:19:39,448 | INFO     | . get job = 0 s
[2024-04-27 18:20:01] 2024-04-27 16:19:39,448 | INFO     | . initial setup = 1 s
[2024-04-27 18:20:01] 2024-04-27 16:19:39,448 | INFO     | . payload setup = 4 s
[2024-04-27 18:20:01] 2024-04-27 16:19:39,449 | INFO     | . stage-in = 0 s
[2024-04-27 18:20:01] 2024-04-27 16:19:39,449 | INFO     | . payload execution = 14535 s
[2024-04-27 18:20:01] 2024-04-27 16:19:39,449 | INFO     | . stage-out = 1 s
[2024-04-27 18:20:01] 2024-04-27 16:19:39,449 | INFO     | . log creation = 0 s
[2024-04-27 18:20:01] 2024-04-27 16:19:39,449 | INFO     | ..............................
[2024-04-27 18:20:01] 2024-04-27 16:19:39,561 | INFO     | 
[2024-04-27 18:20:01] 2024-04-27 16:19:39,561 | INFO     | job summary report
[2024-04-27 18:20:01] 2024-04-27 16:19:39,561 | INFO     | --------------------------------------------------
[2024-04-27 18:20:01] 2024-04-27 16:19:39,561 | INFO     | PanDA job id: 6185781559
[2024-04-27 18:20:01] 2024-04-27 16:19:39,561 | INFO     | task id: 38207243
[2024-04-27 18:20:01] 2024-04-27 16:19:39,561 | INFO     | errors: (none)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,561 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 18:20:01] 2024-04-27 16:19:39,562 | INFO     | pilot state: finished 
[2024-04-27 18:20:01] 2024-04-27 16:19:39,562 | INFO     | transexitcode: 0
[2024-04-27 18:20:01] 2024-04-27 16:19:39,562 | INFO     | exeerrorcode: 0
[2024-04-27 18:20:01] 2024-04-27 16:19:39,562 | INFO     | exeerrordiag: 
[2024-04-27 18:20:01] 2024-04-27 16:19:39,562 | INFO     | exitcode: 0
[2024-04-27 18:20:01] 2024-04-27 16:19:39,562 | INFO     | exitmsg: OK
[2024-04-27 18:20:01] 2024-04-27 16:19:39,562 | INFO     | cpuconsumptiontime: 54785 s
[2024-04-27 18:20:01] 2024-04-27 16:19:39,562 | INFO     | nevents: 400
[2024-04-27 18:20:01] 2024-04-27 16:19:39,563 | INFO     | neventsw: 0
[2024-04-27 18:20:01] 2024-04-27 16:19:39,563 | INFO     | pid: 2282243
[2024-04-27 18:20:01] 2024-04-27 16:19:39,563 | INFO     | pgrp: 2282243
[2024-04-27 18:20:01] 2024-04-27 16:19:39,563 | INFO     | corecount: 4
[2024-04-27 18:20:01] 2024-04-27 16:19:39,563 | INFO     | event service: False
[2024-04-27 18:20:01] 2024-04-27 16:19:39,563 | INFO     | sizes: {0: 2375495, 1: 2375694, 4: 2375900, 11: 2375928, 14543: 2406605, 14545: 2415587, 14547: 2415771, 14555: 2415941}
[2024-04-27 18:20:01] 2024-04-27 16:19:39,563 | INFO     | --------------------------------------------------
[2024-04-27 18:20:01] 2024-04-27 16:19:39,563 | INFO     | 
[2024-04-27 18:20:01] 2024-04-27 16:19:39,564 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-04-27 18:20:01] 2024-04-27 16:19:39,583 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,584 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,584 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,584 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,586 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,586 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 18:20:01] 2024-04-27 16:19:39,586 | INFO     | job 6185781559 has completed (purged errors)
[2024-04-27 18:20:01] 2024-04-27 16:19:39,586 | INFO     | overall cleanup function is called
[2024-04-27 18:20:01] 2024-04-27 16:19:40,593 | INFO     | --- collectZombieJob: --- 10, [2282243]
[2024-04-27 18:20:01] 2024-04-27 16:19:40,594 | INFO     | zombie collector waiting for pid 2282243
[2024-04-27 18:20:01] 2024-04-27 16:19:40,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 18:20:01] 2024-04-27 16:19:41,598 | INFO     | collected zombie processes
[2024-04-27 18:20:01] 2024-04-27 16:19:41,598 | INFO     | will now attempt to kill all subprocesses of pid=2282243
[2024-04-27 18:20:01] 2024-04-27 16:19:41,717 | INFO     | process IDs to be killed: [2282243] (in reverse order)
[2024-04-27 18:20:01] 2024-04-27 16:19:41,798 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 18:20:01] 2024-04-27 16:19:41,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 18:20:01] 2024-04-27 16:19:41,805 | INFO     | did not find any defunct processes belonging to 2282243
[2024-04-27 18:20:01] 2024-04-27 16:19:41,808 | INFO     | did not find any defunct processes belonging to 2282243
[2024-04-27 18:20:01] 2024-04-27 16:19:41,808 | INFO     | ready for new job
[2024-04-27 18:20:01] 2024-04-27 16:19:41,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 18:20:01] 2024-04-27 16:19:41,810 | INFO     | *************************************
[2024-04-27 18:20:01] 2024-04-27 16:19:41,811 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 18:20:01] 2024-04-27 16:19:41,811 | INFO     | *************************************
[2024-04-27 18:20:01] 2024-04-27 16:19:41,811 | INFO     | 
[2024-04-27 18:20:01] 2024-04-27 16:19:41,813 | INFO     | architecture information:
[2024-04-27 18:20:01] 2024-04-27 16:19:41,814 | INFO     | executing command: cat /etc/os-release
[2024-04-27 18:20:01] 2024-04-27 16:19:41,827 | INFO     | cat /etc/os-release:
[2024-04-27 18:20:01] NAME="CentOS Linux"
[2024-04-27 18:20:01] VERSION="7 (Core)"
[2024-04-27 18:20:01] ID="centos"
[2024-04-27 18:20:01] ID_LIKE="rhel fedora"
[2024-04-27 18:20:01] VERSION_ID="7"
[2024-04-27 18:20:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 18:20:01] ANSI_COLOR="0;31"
[2024-04-27 18:20:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 18:20:01] HOME_URL="https://www.centos.org/"
[2024-04-27 18:20:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 18:20:01] 
[2024-04-27 18:20:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 18:20:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 18:20:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 18:20:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 18:20:01] 
[2024-04-27 18:20:01] 2024-04-27 16:19:41,827 | INFO     | *************************************
[2024-04-27 18:20:01] 2024-04-27 16:19:42,331 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-04-27 18:20:01] 2024-04-27 16:19:42,347 | INFO     | sufficient remaining disk space (1639149731840 B)
[2024-04-27 18:20:01] 2024-04-27 16:19:42,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 18:20:01] 2024-04-27 16:19:42,347 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 18:20:01] 2024-04-27 16:19:42,348 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 18:20:01] 2024-04-27 16:19:42,348 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 18:20:01] 2024-04-27 16:19:42,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 18:20:01] 2024-04-27 16:19:42,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 18:20:01] 2024-04-27 16:19:42,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 18:20:01] 2024-04-27 16:19:42,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 18:20:01] 2024-04-27 16:19:43,069 | INFO     | all data control threads have been joined
[2024-04-27 18:20:01] 2024-04-27 16:19:43,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 18:20:01] 2024-04-27 16:19:43,329 | INFO     | aborting loop
[2024-04-27 18:20:01] 2024-04-27 16:19:43,352 | INFO     | [job] retrieve thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:43,483 | INFO     | [job] validate thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:43,486 | INFO     | [payload] failed_post thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:43,581 | INFO     | [payload] validate_post thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:43,596 | INFO     | all payload control threads have been joined
[2024-04-27 18:20:01] 2024-04-27 16:19:43,638 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:43,777 | INFO     | all job control threads have been joined
[2024-04-27 18:20:01] 2024-04-27 16:19:44,073 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:44,074 | INFO     | [data] control thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:44,334 | INFO     | [job] job monitor thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:44,382 | INFO     | [data] copytool_out thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:44,513 | INFO     | [data] copytool_in thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:44,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 18:20:01] 2024-04-27 16:19:44,601 | INFO     | [payload] control thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:44,740 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:44,783 | INFO     | [job] control thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:45,574 | INFO     | [job] queue monitor thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:46,627 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:52,402 | INFO     | job.realtimelogging is not enabled
[2024-04-27 18:20:01] 2024-04-27 16:19:53,407 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 18:20:01] 2024-04-27 16:19:55,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47163679609920)>', '<ExcThread(monitor, started 47164050913024)>']
[2024-04-27 18:20:01] 2024-04-27 16:19:55,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 18:20:01] 2024-04-27 16:19:55,413 | INFO     | [monitor] control thread has ended
[2024-04-27 18:20:01] 2024-04-27 16:20:00,424 | INFO     | all workflow threads have been joined
[2024-04-27 18:20:01] 2024-04-27 16:20:00,425 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 18:20:01] 2024-04-27 16:20:00,425 | INFO     | traces error code: 0
[2024-04-27 18:20:01] 2024-04-27 16:20:00,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 18:20:01] 2024-04-27 16:20:00,505 [wrapper] ==== pilot stdout END ====
[2024-04-27 18:20:01] 2024-04-27 16:20:00,507 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 18:20:01] 2024-04-27 16:20:00,509 [wrapper] pilotpid: 2275397
[2024-04-27 18:20:01] 2024-04-27 16:20:00,514 [wrapper] Pilot exit status: 0
[2024-04-27 18:20:01] 2024-04-27 16:20:00,553 [wrapper] pandaids: 6185781559
[2024-04-27 18:20:01] 2024-04-27 16:20:00,596 [wrapper] cleanup: SIGTERM to supervisor_pilot 2671649 2275398
[2024-04-27 18:20:01] 2024-04-27 16:20:00,607 [wrapper] Test setup, not cleaning
[2024-04-27 18:20:01] 2024-04-27 16:20:00,612 [wrapper] ==== wrapper stdout END ====
[2024-04-27 18:20:01] 2024-04-27 16:20:00,619 [wrapper] ==== wrapper stderr END ====
[2024-04-27 18:20:01] 2024-04-27 16:20:00,635 [wrapper] apfmon messages muted
[2024-04-27 18:20:01]  *** Error codes and diagnostics ***
[2024-04-27 18:20:01]     "exeErrorCode": 0,
[2024-04-27 18:20:01]     "exeErrorDiag": "",
[2024-04-27 18:20:01]     "pilotErrorCode": 0,
[2024-04-27 18:20:01]     "pilotErrorDiag": "",
[2024-04-27 18:20:01]  *** Listing of results directory ***
[2024-04-27 18:20:01] total 711084
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc    462745 Apr 25 05:08 pilot3.tar.gz
[2024-04-27 18:20:01] -rwx------ 1 boinc boinc     32211 Apr 25 05:17 runpilot2-wrapper.sh
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc      6720 Apr 25 05:17 queuedata.json
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc       100 Apr 27 14:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 18:20:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 14:16 run_atlas
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc       105 Apr 27 14:16 job.xml
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc      6455 Apr 27 14:16 init_data.xml
[2024-04-27 18:20:01] -rw-r--r-- 2 boinc boinc 522471555 Apr 27 14:16 EVNT.38207241._000063.pool.root.1
[2024-04-27 18:20:01] -rw-r--r-- 2 boinc boinc     17537 Apr 27 14:16 start_atlas.sh
[2024-04-27 18:20:01] drwxrwx--x 2 boinc boinc      4096 Apr 27 14:16 shared
[2024-04-27 18:20:01] -rw-r--r-- 2 boinc boinc    474809 Apr 27 14:16 input.tar.gz
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc         0 Apr 27 14:16 boinc_lockfile
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc      2616 Apr 27 14:16 pandaJob.out
[2024-04-27 18:20:01] -rw------- 1 boinc boinc       424 Apr 27 14:16 setup.sh.local
[2024-04-27 18:20:01] -rw------- 1 boinc boinc    997154 Apr 27 14:16 agis_schedconf.cvmfs.json
[2024-04-27 18:20:01] -rw------- 1 boinc boinc   1315307 Apr 27 14:16 cric_ddmendpoints.json
[2024-04-27 18:20:01] drwx------ 4 boinc boinc      4096 Apr 27 14:16 pilot3
[2024-04-27 18:20:01] -rw------- 1 boinc boinc 198806599 Apr 27 18:18 HITS.38207243._001442.pool.root.1
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc       532 Apr 27 18:19 boinc_task_state.xml
[2024-04-27 18:20:01] -rw------- 1 boinc boinc      1045 Apr 27 18:19 memory_monitor_summary.json
[2024-04-27 18:20:01] -rw------- 1 boinc boinc         0 Apr 27 18:19 agis_ddmendpoints.agis.ALL.json
[2024-04-27 18:20:01] -rw------- 1 boinc boinc    334456 Apr 27 18:19 log.38207243._001442.job.log.tgz.1
[2024-04-27 18:20:01] -rw------- 1 boinc boinc        95 Apr 27 18:19 pilot_heartbeat.json
[2024-04-27 18:20:01] -rw------- 1 boinc boinc      7739 Apr 27 18:19 heartbeat.json
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc        28 Apr 27 18:19 wrapper_checkpoint.txt
[2024-04-27 18:20:01] -rw------- 1 boinc boinc      4417 Apr 27 18:20 pilotlog.txt
[2024-04-27 18:20:01] -rw------- 1 boinc boinc   1359794 Apr 27 18:20 log.38207243._001442.job.log.1
[2024-04-27 18:20:01] -rw------- 1 boinc boinc       357 Apr 27 18:20 output.list
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc       620 Apr 27 18:20 runtime_log
[2024-04-27 18:20:01] -rw------- 1 boinc boinc   1710080 Apr 27 18:20 result.tar.gz
[2024-04-27 18:20:01] -rw------- 1 boinc boinc       659 Apr 27 18:20 xVONDmpm4J5nsSi4apGgGQJmABFKDmABFKDmRLXKDmewRKDmRHRrTn.diag
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc     11410 Apr 27 18:20 runtime_log.err
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc      8192 Apr 27 18:20 boinc_mmap_file
[2024-04-27 18:20:01] -rw-r--r-- 1 boinc boinc     21141 Apr 27 18:20 stderr.txt
[2024-04-27 18:20:01] HITS file was successfully produced:
[2024-04-27 18:20:01] -rw------- 1 boinc boinc 198806599 Apr 27 18:18 shared/HITS.pool.root.1
[2024-04-27 18:20:01]  *** Contents of shared directory: ***
[2024-04-27 18:20:01] total 706540
[2024-04-27 18:20:01] -rw-r--r-- 2 boinc boinc 522471555 Apr 27 14:16 ATLAS.root_0
[2024-04-27 18:20:01] -rw-r--r-- 2 boinc boinc     17537 Apr 27 14:16 start_atlas.sh
[2024-04-27 18:20:01] -rw-r--r-- 2 boinc boinc    474809 Apr 27 14:16 input.tar.gz
[2024-04-27 18:20:01] -rw------- 1 boinc boinc 198806599 Apr 27 18:18 HITS.pool.root.1
[2024-04-27 18:20:01] -rw------- 1 boinc boinc   1710080 Apr 27 18:20 result.tar.gz
18:20:03 (2271178): run_atlas exited; CPU time 54557.328603
18:20:03 (2271178): called boinc_finish(0)

</stderr_txt>
]]>

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