Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:22:18 (3993121): wrapper (7.7.26015): starting
20:22:18 (3993121): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 20:22:18] Arguments: --nthreads 4
[2024-04-26 20:22:18] Threads: 4
[2024-04-26 20:22:18] Checking for CVMFS
[2024-04-26 20:22:18] No cvmfs_config command found, will try listing directly
[2024-04-26 20:22:18] CVMFS is ok
[2024-04-26 20:22:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 20:22:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 20:22:18] Further information can be found at the LHC@home message board.
[2024-04-26 20:22:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 20:22:18] Checking for apptainer binary...
[2024-04-26 20:22:18] which: no apptainer in ((null))
[2024-04-26 20:22:18] apptainer is not installed, using version from CVMFS
[2024-04-26 20:22:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 20:22:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-04-26 20:22:20] apptainer works
[2024-04-26 20:22:20] Set ATHENA_PROC_NUMBER=4
[2024-04-26 20:22:20] Set ATHENA_CORE_NUMBER=4
[2024-04-26 20:22:20] Starting ATLAS job with PandaID=6185750102
[2024-04-26 20:22:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 23:14:08]  *** The last 200 lines of the pilot log: ***
[2024-04-26 23:14:08]  domain=
[2024-04-26 23:14:08]  filesize=296744
[2024-04-26 23:14:08]  filetype=log
[2024-04-26 23:14:08]  guid=5ba9c8f0-0cb4-4546-b422-b101281f04eb
[2024-04-26 23:14:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 23:14:08]  is_tar=False
[2024-04-26 23:14:08]  lfn=log.38207235._001579.job.log.tgz.1
[2024-04-26 23:14:08]  mtime=0
[2024-04-26 23:14:08]  protocol_id=None
[2024-04-26 23:14:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 23:14:08]  replicas=None
[2024-04-26 23:14:08]  scope=mc23_13p6TeV
[2024-04-26 23:14:08]  status=None
[2024-04-26 23:14:08]  status_code=0
[2024-04-26 23:14:08]  storage_token=
[2024-04-26 23:14:08]  surl=/scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6185750102/log.38207235._001579.job.log.tgz.1
[2024-04-26 23:14:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/21/log.38207235._001579.job.log.tgz.1
[2024-04-26 23:14:08]  workdir=None
[2024-04-26 23:14:08] ]
[2024-04-26 23:14:08] 2024-04-26 21:13:38,168 | INFO     | transferring file log.38207235._001579.job.log.tgz.1 from /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6185750102/log.38207235._001579.job.log.tgz.1 to /scratch/b
[2024-04-26 23:14:08] 2024-04-26 21:13:38,168 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6185750102/log.38207235._001579.job.log.tgz.1 /scratch/boinc/var/slot44/slots/0/lo
[2024-04-26 23:14:08] 2024-04-26 21:13:38,186 | INFO     | adding to output.list: log.38207235._001579.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/21/log.38207235._001579.job.log.tg
[2024-04-26 23:14:08] 2024-04-26 21:13:38,187 | INFO     | summary of transferred files:
[2024-04-26 23:14:08] 2024-04-26 21:13:38,187 | INFO     |  -- lfn=log.38207235._001579.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 23:14:08] 2024-04-26 21:13:38,187 | INFO     | stage-out finished correctly
[2024-04-26 23:14:08] 2024-04-26 21:13:39,713 | WARNING  | process 4004446 is no longer using CPU - aborting
[2024-04-26 23:14:08] 2024-04-26 21:13:39,713 | INFO     | will not send any job update
[2024-04-26 23:14:08] 2024-04-26 21:13:39,762 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 23:14:08] 2024-04-26 21:13:42,216 | INFO     | monitor loop #793: job 0:6185750102 is in state 'finished'
[2024-04-26 23:14:08] 2024-04-26 21:13:42,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 23:14:08] 2024-04-26 21:13:42,522 | INFO     | job 6185750102 has state=finished
[2024-04-26 23:14:08] 2024-04-26 21:13:42,522 | INFO     | preparing for final server update for job 6185750102 in state='finished'
[2024-04-26 23:14:08] 2024-04-26 21:13:42,523 | INFO     | this job has now completed (state=finished)
[2024-04-26 23:14:08] 2024-04-26 21:13:42,523 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 23:14:08] 2024-04-26 21:13:42,523 | INFO     | job 6185750102 has finished - writing final server update
[2024-04-26 23:14:08] 2024-04-26 21:13:42,524 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4022361/.job.ad'
[2024-04-26 23:14:08] 2024-04-26 21:13:42,524 | INFO     | total number of processed events: 400 (read)
[2024-04-26 23:14:08] 2024-04-26 21:13:42,531 | INFO     | executing command: lscpu
[2024-04-26 23:14:08] 2024-04-26 21:13:42,581 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 23:14:08] 2024-04-26 21:13:42,581 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 23:14:08] 2024-04-26 21:13:42,619 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 23:14:08] 2024-04-26 21:13:44,719 | INFO     | monitor loop #794: job 0:6185750102 is in state 'finished'
[2024-04-26 23:14:08] 2024-04-26 21:13:44,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,765 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 23:14:08] 2024-04-26 21:13:45,765 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6185750102/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,766 | INFO     | extracted standard info from prmon json
[2024-04-26 23:14:08] 2024-04-26 21:13:45,766 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 23:14:08] 2024-04-26 21:13:45,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 23:14:08] 2024-04-26 21:13:45,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 23:14:08] 2024-04-26 21:13:45,769 | INFO     | fitting pss+swap vs Time
[2024-04-26 23:14:08] 2024-04-26 21:13:45,770 | INFO     | current chi2=3.9494672266556936 (change=-0.00038673318276501026 %)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,770 | INFO     | right removable region: 162
[2024-04-26 23:14:08] 2024-04-26 21:13:45,771 | INFO     | current chi2=1.534214303333511 (change=61.153741793460725 %)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,772 | INFO     | current chi2=0.08063978734552915 (change=94.74390330149338 %)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,772 | INFO     | current chi2=0.00979422971497979 (change=87.85434580449349 %)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,773 | INFO     | current chi2=0.009686083983786967 (change=1.1041780144018902 %)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,773 | INFO     | left removable region: 40
[2024-04-26 23:14:08] 2024-04-26 21:13:45,773 | INFO     | current memory leak: -3.94 B/s (using 122 data points, chi2=0.01)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | ..............................
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | . Timing measurements:
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | . get job = 0 s
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | . initial setup = 1 s
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | . payload setup = 4 s
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | . stage-in = 0 s
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | . payload execution = 10245 s
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | . stage-out = 0 s
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | . log creation = 0 s
[2024-04-26 23:14:08] 2024-04-26 21:13:45,774 | INFO     | ..............................
[2024-04-26 23:14:08] 2024-04-26 21:13:45,944 | INFO     | 
[2024-04-26 23:14:08] 2024-04-26 21:13:45,944 | INFO     | job summary report
[2024-04-26 23:14:08] 2024-04-26 21:13:45,944 | INFO     | --------------------------------------------------
[2024-04-26 23:14:08] 2024-04-26 21:13:45,944 | INFO     | PanDA job id: 6185750102
[2024-04-26 23:14:08] 2024-04-26 21:13:45,944 | INFO     | task id: 38207235
[2024-04-26 23:14:08] 2024-04-26 21:13:45,945 | INFO     | errors: (none)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,945 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 23:14:08] 2024-04-26 21:13:45,945 | INFO     | pilot state: finished 
[2024-04-26 23:14:08] 2024-04-26 21:13:45,945 | INFO     | transexitcode: 0
[2024-04-26 23:14:08] 2024-04-26 21:13:45,945 | INFO     | exeerrorcode: 0
[2024-04-26 23:14:08] 2024-04-26 21:13:45,945 | INFO     | exeerrordiag: 
[2024-04-26 23:14:08] 2024-04-26 21:13:45,945 | INFO     | exitcode: 0
[2024-04-26 23:14:08] 2024-04-26 21:13:45,946 | INFO     | exitmsg: OK
[2024-04-26 23:14:08] 2024-04-26 21:13:45,946 | INFO     | cpuconsumptiontime: 38160 s
[2024-04-26 23:14:08] 2024-04-26 21:13:45,946 | INFO     | nevents: 400
[2024-04-26 23:14:08] 2024-04-26 21:13:45,946 | INFO     | neventsw: 0
[2024-04-26 23:14:08] 2024-04-26 21:13:45,946 | INFO     | pid: 4004446
[2024-04-26 23:14:08] 2024-04-26 21:13:45,946 | INFO     | pgrp: 4004446
[2024-04-26 23:14:08] 2024-04-26 21:13:45,946 | INFO     | corecount: 4
[2024-04-26 23:14:08] 2024-04-26 21:13:45,947 | INFO     | event service: False
[2024-04-26 23:14:08] 2024-04-26 21:13:45,947 | INFO     | sizes: {0: 2374822, 1: 2375757, 4: 2375963, 11: 2375991, 10253: 2404841, 10254: 2413823, 10256: 2414007, 10262: 2414177}
[2024-04-26 23:14:08] 2024-04-26 21:13:45,947 | INFO     | --------------------------------------------------
[2024-04-26 23:14:08] 2024-04-26 21:13:45,947 | INFO     | 
[2024-04-26 23:14:08] 2024-04-26 21:13:45,947 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2024-04-26 23:14:08] 2024-04-26 21:13:45,971 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,971 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,971 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,971 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,973 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,973 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 23:14:08] 2024-04-26 21:13:45,973 | INFO     | job 6185750102 has completed (purged errors)
[2024-04-26 23:14:08] 2024-04-26 21:13:45,973 | INFO     | overall cleanup function is called
[2024-04-26 23:14:08] 2024-04-26 21:13:46,981 | INFO     | --- collectZombieJob: --- 10, [4004446]
[2024-04-26 23:14:08] 2024-04-26 21:13:46,981 | INFO     | zombie collector waiting for pid 4004446
[2024-04-26 23:14:08] 2024-04-26 21:13:46,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 23:14:08] 2024-04-26 21:13:47,982 | INFO     | collected zombie processes
[2024-04-26 23:14:08] 2024-04-26 21:13:47,982 | INFO     | will now attempt to kill all subprocesses of pid=4004446
[2024-04-26 23:14:08] 2024-04-26 21:13:48,138 | INFO     | process IDs to be killed: [4004446] (in reverse order)
[2024-04-26 23:14:08] 2024-04-26 21:13:48,237 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 23:14:08] 2024-04-26 21:13:48,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 23:14:08] 2024-04-26 21:13:48,248 | INFO     | did not find any defunct processes belonging to 4004446
[2024-04-26 23:14:08] 2024-04-26 21:13:48,258 | INFO     | did not find any defunct processes belonging to 4004446
[2024-04-26 23:14:08] 2024-04-26 21:13:48,258 | INFO     | ready for new job
[2024-04-26 23:14:08] 2024-04-26 21:13:48,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 23:14:08] 2024-04-26 21:13:48,260 | INFO     | *************************************
[2024-04-26 23:14:08] 2024-04-26 21:13:48,261 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 23:14:08] 2024-04-26 21:13:48,261 | INFO     | *************************************
[2024-04-26 23:14:08] 2024-04-26 21:13:48,261 | INFO     | 
[2024-04-26 23:14:08] 2024-04-26 21:13:48,265 | INFO     | architecture information:
[2024-04-26 23:14:08] 2024-04-26 21:13:48,266 | INFO     | executing command: cat /etc/os-release
[2024-04-26 23:14:08] 2024-04-26 21:13:48,284 | INFO     | cat /etc/os-release:
[2024-04-26 23:14:08] NAME="CentOS Linux"
[2024-04-26 23:14:08] VERSION="7 (Core)"
[2024-04-26 23:14:08] ID="centos"
[2024-04-26 23:14:08] ID_LIKE="rhel fedora"
[2024-04-26 23:14:08] VERSION_ID="7"
[2024-04-26 23:14:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 23:14:08] ANSI_COLOR="0;31"
[2024-04-26 23:14:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 23:14:08] HOME_URL="https://www.centos.org/"
[2024-04-26 23:14:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 23:14:08] 
[2024-04-26 23:14:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 23:14:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 23:14:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 23:14:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 23:14:08] 
[2024-04-26 23:14:08] 2024-04-26 21:13:48,284 | INFO     | *************************************
[2024-04-26 23:14:08] 2024-04-26 21:13:48,787 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2024-04-26 23:14:08] 2024-04-26 21:13:48,807 | INFO     | sufficient remaining disk space (618832855040 B)
[2024-04-26 23:14:08] 2024-04-26 21:13:48,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 23:14:08] 2024-04-26 21:13:48,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 23:14:08] 2024-04-26 21:13:48,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 23:14:08] 2024-04-26 21:13:48,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 23:14:08] 2024-04-26 21:13:48,808 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 23:14:08] 2024-04-26 21:13:48,809 | INFO     | aborting loop
[2024-04-26 23:14:08] 2024-04-26 21:13:48,809 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 23:14:08] 2024-04-26 21:13:48,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 23:14:08] 2024-04-26 21:13:48,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 23:14:08] 2024-04-26 21:13:49,214 | INFO     | all data control threads have been joined
[2024-04-26 23:14:08] 2024-04-26 21:13:49,812 | INFO     | [job] retrieve thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:49,814 | INFO     | [job] job monitor thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:49,862 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:49,878 | INFO     | all payload control threads have been joined
[2024-04-26 23:14:08] 2024-04-26 21:13:49,973 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:50,219 | INFO     | [data] control thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:50,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 23:14:08] 2024-04-26 21:13:50,418 | INFO     | all job control threads have been joined
[2024-04-26 23:14:08] 2024-04-26 21:13:50,459 | INFO     | [data] copytool_in thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:50,508 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:50,684 | INFO     | [payload] failed_post thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:50,814 | INFO     | [data] copytool_out thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:50,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 23:14:08] 2024-04-26 21:13:50,883 | INFO     | [payload] control thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:51,273 | INFO     | [job] validate thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:51,365 | INFO     | [payload] validate_post thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:51,423 | INFO     | [job] control thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:51,849 | INFO     | [job] queue monitor thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:54,371 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:13:59,602 | INFO     | job.realtimelogging is not enabled
[2024-04-26 23:14:08] 2024-04-26 21:14:00,607 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 23:14:08] 2024-04-26 21:14:02,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47092223267904)>', '<ExcThread(monitor, started 47092400805632)>']
[2024-04-26 23:14:08] 2024-04-26 21:14:02,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 23:14:08] 2024-04-26 21:14:02,879 | INFO     | [monitor] control thread has ended
[2024-04-26 23:14:08] 2024-04-26 21:14:07,397 | INFO     | all workflow threads have been joined
[2024-04-26 23:14:08] 2024-04-26 21:14:07,397 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 23:14:08] 2024-04-26 21:14:07,397 | INFO     | traces error code: 0
[2024-04-26 23:14:08] 2024-04-26 21:14:07,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 23:14:08] 2024-04-26 21:14:07,477 [wrapper] ==== pilot stdout END ====
[2024-04-26 23:14:08] 2024-04-26 21:14:07,479 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 23:14:08] 2024-04-26 21:14:07,482 [wrapper] pilotpid: 3997443
[2024-04-26 23:14:08] 2024-04-26 21:14:07,484 [wrapper] Pilot exit status: 0
[2024-04-26 23:14:08] 2024-04-26 21:14:07,494 [wrapper] pandaids: 6185750102
[2024-04-26 23:14:08] 2024-04-26 21:14:07,548 [wrapper] cleanup: SIGTERM to supervisor_pilot  257130 3997444
[2024-04-26 23:14:08] 2024-04-26 21:14:07,550 [wrapper] Test setup, not cleaning
[2024-04-26 23:14:08] 2024-04-26 21:14:07,552 [wrapper] ==== wrapper stdout END ====
[2024-04-26 23:14:08] 2024-04-26 21:14:07,554 [wrapper] ==== wrapper stderr END ====
[2024-04-26 23:14:08] 2024-04-26 21:14:07,557 [wrapper] apfmon messages muted
[2024-04-26 23:14:08]  *** Error codes and diagnostics ***
[2024-04-26 23:14:08]     "exeErrorCode": 0,
[2024-04-26 23:14:08]     "exeErrorDiag": "",
[2024-04-26 23:14:08]     "pilotErrorCode": 0,
[2024-04-26 23:14:08]     "pilotErrorDiag": "",
[2024-04-26 23:14:08]  *** Listing of results directory ***
[2024-04-26 23:14:08] total 690516
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc    462745 Apr 25 04:30 pilot3.tar.gz
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc      6720 Apr 25 04:48 queuedata.json
[2024-04-26 23:14:08] -rwx------ 1 boinc boinc     32211 Apr 25 04:49 runpilot2-wrapper.sh
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc       100 Apr 26 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 23:14:08] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 20:22 run_atlas
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc       105 Apr 26 20:22 job.xml
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc      6663 Apr 26 20:22 init_data.xml
[2024-04-26 23:14:08] -rw-r--r-- 2 boinc boinc 512036583 Apr 26 20:22 EVNT.38207233._000060.pool.root.1
[2024-04-26 23:14:08] -rw-r--r-- 2 boinc boinc     17537 Apr 26 20:22 start_atlas.sh
[2024-04-26 23:14:08] drwxrwx--x 2 boinc boinc      4096 Apr 26 20:22 shared
[2024-04-26 23:14:08] -rw-r--r-- 2 boinc boinc    474818 Apr 26 20:22 input.tar.gz
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc         0 Apr 26 20:22 boinc_lockfile
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc      2677 Apr 26 20:22 pandaJob.out
[2024-04-26 23:14:08] -rw------- 1 boinc boinc       424 Apr 26 20:22 setup.sh.local
[2024-04-26 23:14:08] -rw------- 1 boinc boinc    997399 Apr 26 20:22 agis_schedconf.cvmfs.json
[2024-04-26 23:14:08] -rw------- 1 boinc boinc         0 Apr 26 20:22 agis_ddmendpoints.agis.ALL.json
[2024-04-26 23:14:08] -rw------- 1 boinc boinc   1315307 Apr 26 20:22 cric_ddmendpoints.json
[2024-04-26 23:14:08] drwx------ 4 boinc boinc      4096 Apr 26 20:22 pilot3
[2024-04-26 23:14:08] -rw------- 1 boinc boinc        95 Apr 26 23:12 pilot_heartbeat.json
[2024-04-26 23:14:08] -rw------- 1 boinc boinc 188999127 Apr 26 23:13 HITS.38207235._001579.pool.root.1
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc       532 Apr 26 23:13 boinc_task_state.xml
[2024-04-26 23:14:08] -rw------- 1 boinc boinc      1045 Apr 26 23:13 memory_monitor_summary.json
[2024-04-26 23:14:08] -rw------- 1 boinc boinc    296744 Apr 26 23:13 log.38207235._001579.job.log.tgz.1
[2024-04-26 23:14:08] -rw------- 1 boinc boinc      7729 Apr 26 23:13 heartbeat.json
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc      8192 Apr 26 23:13 boinc_mmap_file
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc        28 Apr 26 23:13 wrapper_checkpoint.txt
[2024-04-26 23:14:08] -rw------- 1 boinc boinc      4416 Apr 26 23:14 pilotlog.txt
[2024-04-26 23:14:08] -rw------- 1 boinc boinc    986100 Apr 26 23:14 log.38207235._001579.job.log.1
[2024-04-26 23:14:08] -rw------- 1 boinc boinc       357 Apr 26 23:14 output.list
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc       620 Apr 26 23:14 runtime_log
[2024-04-26 23:14:08] -rw------- 1 boinc boinc   1300480 Apr 26 23:14 result.tar.gz
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc     11410 Apr 26 23:14 runtime_log.err
[2024-04-26 23:14:08] -rw------- 1 boinc boinc       657 Apr 26 23:14 qt7LDmCM4J5n9Rq4apoT9bVoABFKDmABFKDmtztZDmFrNKDmrnliCo.diag
[2024-04-26 23:14:08] -rw-r--r-- 1 boinc boinc     21175 Apr 26 23:14 stderr.txt
[2024-04-26 23:14:08] HITS file was successfully produced:
[2024-04-26 23:14:08] -rw------- 1 boinc boinc 188999127 Apr 26 23:13 shared/HITS.pool.root.1
[2024-04-26 23:14:08]  *** Contents of shared directory: ***
[2024-04-26 23:14:08] total 686372
[2024-04-26 23:14:08] -rw-r--r-- 2 boinc boinc 512036583 Apr 26 20:22 ATLAS.root_0
[2024-04-26 23:14:08] -rw-r--r-- 2 boinc boinc     17537 Apr 26 20:22 start_atlas.sh
[2024-04-26 23:14:08] -rw-r--r-- 2 boinc boinc    474818 Apr 26 20:22 input.tar.gz
[2024-04-26 23:14:08] -rw------- 1 boinc boinc 188999127 Apr 26 23:13 HITS.pool.root.1
[2024-04-26 23:14:08] -rw------- 1 boinc boinc   1300480 Apr 26 23:14 result.tar.gz
23:14:09 (3993121): run_atlas exited; CPU time 37942.913609
23:14:09 (3993121): called boinc_finish(0)

</stderr_txt>
]]>

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