Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:44 (3112547): wrapper (7.7.26015): starting
19:12:44 (3112547): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 19:12:44] Arguments: --nthreads 4
[2024-04-26 19:12:44] Threads: 4
[2024-04-26 19:12:44] Checking for CVMFS
[2024-04-26 19:12:44] No cvmfs_config command found, will try listing directly
[2024-04-26 19:12:44] CVMFS is ok
[2024-04-26 19:12:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 19:12:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 19:12:44] Further information can be found at the LHC@home message board.
[2024-04-26 19:12:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 19:12:44] Checking for apptainer binary...
[2024-04-26 19:12:44] which: no apptainer in ((null))
[2024-04-26 19:12:44] apptainer is not installed, using version from CVMFS
[2024-04-26 19:12:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 19:12:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-04-26 19:12:45] apptainer works
[2024-04-26 19:12:45] Set ATHENA_PROC_NUMBER=4
[2024-04-26 19:12:45] Set ATHENA_CORE_NUMBER=4
[2024-04-26 19:12:45] Starting ATLAS job with PandaID=6185303569
[2024-04-26 19:12:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 22:08:33]  *** The last 200 lines of the pilot log: ***
[2024-04-26 22:08:33]  filesize=305310
[2024-04-26 22:08:33]  filetype=log
[2024-04-26 22:08:33]  guid=bd4a39c2-ca1d-405b-b851-ea8c1f47fec0
[2024-04-26 22:08:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 22:08:33]  is_tar=False
[2024-04-26 22:08:33]  lfn=log.38204279._025502.job.log.tgz.1
[2024-04-26 22:08:33]  mtime=0
[2024-04-26 22:08:33]  protocol_id=None
[2024-04-26 22:08:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 22:08:33]  replicas=None
[2024-04-26 22:08:33]  scope=mc23_13p6TeV
[2024-04-26 22:08:33]  status=None
[2024-04-26 22:08:33]  status_code=0
[2024-04-26 22:08:33]  storage_token=
[2024-04-26 22:08:33]  surl=/scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6185303569/log.38204279._025502.job.log.tgz.1
[2024-04-26 22:08:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/b7/log.38204279._025502.job.log.tgz.1
[2024-04-26 22:08:33]  workdir=None
[2024-04-26 22:08:33] ]
[2024-04-26 22:08:33] 2024-04-26 20:08:03,654 | INFO     | transferring file log.38204279._025502.job.log.tgz.1 from /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6185303569/log.38204279._025502.job.log.tgz.1 to /scratch/b
[2024-04-26 22:08:33] 2024-04-26 20:08:03,654 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6185303569/log.38204279._025502.job.log.tgz.1 /scratch/boinc/var/slot48/slots/0/lo
[2024-04-26 22:08:33] 2024-04-26 20:08:03,673 | INFO     | adding to output.list: log.38204279._025502.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/b7/log.38204279._025502.job.log.tg
[2024-04-26 22:08:33] 2024-04-26 20:08:03,674 | INFO     | summary of transferred files:
[2024-04-26 22:08:33] 2024-04-26 20:08:03,674 | INFO     |  -- lfn=log.38204279._025502.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 22:08:33] 2024-04-26 20:08:03,674 | INFO     | stage-out finished correctly
[2024-04-26 22:08:33] 2024-04-26 20:08:04,776 | INFO     | monitor loop #797: job 0:6185303569 is in state 'finished'
[2024-04-26 22:08:33] 2024-04-26 20:08:04,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 22:08:33] 2024-04-26 20:08:05,944 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 22:08:33] 2024-04-26 20:08:06,990 | INFO     | job 6185303569 has state=finished
[2024-04-26 22:08:33] 2024-04-26 20:08:06,990 | INFO     | preparing for final server update for job 6185303569 in state='finished'
[2024-04-26 22:08:33] 2024-04-26 20:08:06,991 | INFO     | this job has now completed (state=finished)
[2024-04-26 22:08:33] 2024-04-26 20:08:06,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 22:08:33] 2024-04-26 20:08:06,991 | INFO     | job 6185303569 has finished - writing final server update
[2024-04-26 22:08:33] 2024-04-26 20:08:06,991 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1571011/.job.ad'
[2024-04-26 22:08:33] 2024-04-26 20:08:06,991 | INFO     | total number of processed events: 400 (read)
[2024-04-26 22:08:33] 2024-04-26 20:08:06,999 | INFO     | executing command: lscpu
[2024-04-26 22:08:33] 2024-04-26 20:08:07,053 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-26 22:08:33] 2024-04-26 20:08:07,054 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 22:08:33] 2024-04-26 20:08:07,103 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 22:08:33] 2024-04-26 20:08:07,279 | INFO     | monitor loop #798: job 0:6185303569 is in state 'finished'
[2024-04-26 22:08:33] 2024-04-26 20:08:07,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 22:08:33] 2024-04-26 20:08:09,782 | INFO     | monitor loop #799: job 0:6185303569 is in state 'finished'
[2024-04-26 22:08:33] 2024-04-26 20:08:09,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,702 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 22:08:33] 2024-04-26 20:08:11,703 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6185303569/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,704 | INFO     | extracted standard info from prmon json
[2024-04-26 22:08:33] 2024-04-26 20:08:11,704 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 22:08:33] 2024-04-26 20:08:11,704 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 22:08:33] 2024-04-26 20:08:11,704 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 22:08:33] 2024-04-26 20:08:11,708 | INFO     | fitting pss+swap vs Time
[2024-04-26 22:08:33] 2024-04-26 20:08:11,710 | INFO     | current chi2=4.304386247428317 (change=0.040025066540343275 %)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,710 | INFO     | right removable region: 166
[2024-04-26 22:08:33] 2024-04-26 20:08:11,711 | INFO     | current chi2=1.6795572240081917 (change=60.995949628945134 %)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,712 | INFO     | current chi2=0.05840900660322747 (change=96.52235685880134 %)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,713 | INFO     | current chi2=0.0006082767218709862 (change=98.95859087965148 %)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,714 | INFO     | current chi2=0.00017205321539944465 (change=71.71464742720556 %)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,715 | INFO     | current chi2=6.65671289573181e-05 (change=61.31015116295643 %)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,716 | INFO     | current chi2=5.024938962377979e-05 (change=24.5132088301435 %)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,716 | INFO     | left removable region: 60
[2024-04-26 22:08:33] 2024-04-26 20:08:11,717 | INFO     | current memory leak: 0.79 B/s (using 106 data points, chi2=0.00)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,717 | INFO     | ..............................
[2024-04-26 22:08:33] 2024-04-26 20:08:11,717 | INFO     | . Timing measurements:
[2024-04-26 22:08:33] 2024-04-26 20:08:11,717 | INFO     | . get job = 0 s
[2024-04-26 22:08:33] 2024-04-26 20:08:11,718 | INFO     | . initial setup = 1 s
[2024-04-26 22:08:33] 2024-04-26 20:08:11,718 | INFO     | . payload setup = 7 s
[2024-04-26 22:08:33] 2024-04-26 20:08:11,718 | INFO     | . stage-in = 0 s
[2024-04-26 22:08:33] 2024-04-26 20:08:11,718 | INFO     | . payload execution = 10477 s
[2024-04-26 22:08:33] 2024-04-26 20:08:11,718 | INFO     | . stage-out = 0 s
[2024-04-26 22:08:33] 2024-04-26 20:08:11,718 | INFO     | . log creation = 0 s
[2024-04-26 22:08:33] 2024-04-26 20:08:11,718 | INFO     | ..............................
[2024-04-26 22:08:33] 2024-04-26 20:08:11,813 | INFO     | 
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | job summary report
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | --------------------------------------------------
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | PanDA job id: 6185303569
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | task id: 38204279
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | errors: (none)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | pilot state: finished 
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | transexitcode: 0
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | exeerrorcode: 0
[2024-04-26 22:08:33] 2024-04-26 20:08:11,814 | INFO     | exeerrordiag: 
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | exitcode: 0
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | exitmsg: OK
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | cpuconsumptiontime: 39275 s
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | nevents: 400
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | neventsw: 0
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | pid: 3124849
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | pgrp: 3124849
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | corecount: 4
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | event service: False
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | sizes: {0: 2375590, 5: 2375796, 11: 2375852, 10489: 2404739, 10490: 2413721, 10492: 2413777, 10498: 2414075}
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | --------------------------------------------------
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | 
[2024-04-26 22:08:33] 2024-04-26 20:08:11,815 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2024-04-26 22:08:33] 2024-04-26 20:08:11,838 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,838 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,838 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,838 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,840 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 22:08:33] 2024-04-26 20:08:11,840 | INFO     | job 6185303569 has completed (purged errors)
[2024-04-26 22:08:33] 2024-04-26 20:08:11,840 | INFO     | overall cleanup function is called
[2024-04-26 22:08:33] 2024-04-26 20:08:12,847 | INFO     | --- collectZombieJob: --- 10, [3124849]
[2024-04-26 22:08:33] 2024-04-26 20:08:12,848 | INFO     | zombie collector waiting for pid 3124849
[2024-04-26 22:08:33] 2024-04-26 20:08:12,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 22:08:33] 2024-04-26 20:08:13,852 | INFO     | collected zombie processes
[2024-04-26 22:08:33] 2024-04-26 20:08:13,853 | INFO     | will now attempt to kill all subprocesses of pid=3124849
[2024-04-26 22:08:33] 2024-04-26 20:08:14,066 | INFO     | process IDs to be killed: [3124849] (in reverse order)
[2024-04-26 22:08:33] 2024-04-26 20:08:14,241 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 22:08:33] 2024-04-26 20:08:14,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 22:08:33] 2024-04-26 20:08:14,254 | INFO     | did not find any defunct processes belonging to 3124849
[2024-04-26 22:08:33] 2024-04-26 20:08:14,263 | INFO     | did not find any defunct processes belonging to 3124849
[2024-04-26 22:08:33] 2024-04-26 20:08:14,263 | INFO     | ready for new job
[2024-04-26 22:08:33] 2024-04-26 20:08:14,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 22:08:33] 2024-04-26 20:08:14,264 | INFO     | *************************************
[2024-04-26 22:08:33] 2024-04-26 20:08:14,265 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 22:08:33] 2024-04-26 20:08:14,265 | INFO     | *************************************
[2024-04-26 22:08:33] 2024-04-26 20:08:14,265 | INFO     | 
[2024-04-26 22:08:33] 2024-04-26 20:08:14,270 | INFO     | architecture information:
[2024-04-26 22:08:33] 2024-04-26 20:08:14,270 | INFO     | executing command: cat /etc/os-release
[2024-04-26 22:08:33] 2024-04-26 20:08:14,289 | INFO     | cat /etc/os-release:
[2024-04-26 22:08:33] NAME="CentOS Linux"
[2024-04-26 22:08:33] VERSION="7 (Core)"
[2024-04-26 22:08:33] ID="centos"
[2024-04-26 22:08:33] ID_LIKE="rhel fedora"
[2024-04-26 22:08:33] VERSION_ID="7"
[2024-04-26 22:08:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 22:08:33] ANSI_COLOR="0;31"
[2024-04-26 22:08:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 22:08:33] HOME_URL="https://www.centos.org/"
[2024-04-26 22:08:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 22:08:33] 
[2024-04-26 22:08:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 22:08:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 22:08:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 22:08:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 22:08:33] 
[2024-04-26 22:08:33] 2024-04-26 20:08:14,290 | INFO     | *************************************
[2024-04-26 22:08:33] 2024-04-26 20:08:14,793 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2024-04-26 22:08:33] 2024-04-26 20:08:14,814 | INFO     | sufficient remaining disk space (3037286367232 B)
[2024-04-26 22:08:33] 2024-04-26 20:08:14,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 22:08:33] 2024-04-26 20:08:14,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 22:08:33] 2024-04-26 20:08:14,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 22:08:33] 2024-04-26 20:08:15,216 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 22:08:33] 2024-04-26 20:08:15,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 22:08:33] 2024-04-26 20:08:15,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 22:08:33] 2024-04-26 20:08:15,262 | INFO     | all data control threads have been joined
[2024-04-26 22:08:33] 2024-04-26 20:08:15,721 | INFO     | all payload control threads have been joined
[2024-04-26 22:08:33] 2024-04-26 20:08:15,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 22:08:33] 2024-04-26 20:08:15,803 | INFO     | aborting loop
[2024-04-26 22:08:33] 2024-04-26 20:08:15,820 | INFO     | [job] retrieve thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:15,894 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:15,956 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:16,147 | INFO     | all job control threads have been joined
[2024-04-26 22:08:33] 2024-04-26 20:08:16,267 | INFO     | [data] control thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:16,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 22:08:33] 2024-04-26 20:08:16,559 | INFO     | [job] validate thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:16,726 | INFO     | [payload] control thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:16,807 | INFO     | [job] job monitor thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:16,820 | INFO     | [data] copytool_out thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:16,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 22:08:33] 2024-04-26 20:08:16,857 | INFO     | [payload] validate_post thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:16,981 | INFO     | [payload] failed_post thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:17,037 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:17,118 | INFO     | [data] copytool_in thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:17,152 | INFO     | [job] control thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:17,827 | INFO     | [job] queue monitor thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:20,525 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:25,832 | INFO     | job.realtimelogging is not enabled
[2024-04-26 22:08:33] 2024-04-26 20:08:26,837 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 22:08:33] 2024-04-26 20:08:27,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47989431907392)>', '<ExcThread(monitor, started 47989598938880)>']
[2024-04-26 22:08:33] 2024-04-26 20:08:28,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 22:08:33] 2024-04-26 20:08:28,285 | INFO     | [monitor] control thread has ended
[2024-04-26 22:08:33] 2024-04-26 20:08:32,832 | INFO     | all workflow threads have been joined
[2024-04-26 22:08:33] 2024-04-26 20:08:32,833 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 22:08:33] 2024-04-26 20:08:32,833 | INFO     | traces error code: 0
[2024-04-26 22:08:33] 2024-04-26 20:08:32,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 22:08:33] 2024-04-26 20:08:32,944 [wrapper] ==== pilot stdout END ====
[2024-04-26 22:08:33] 2024-04-26 20:08:32,946 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 22:08:33] 2024-04-26 20:08:32,948 [wrapper] pilotpid: 3117195
[2024-04-26 22:08:33] 2024-04-26 20:08:32,950 [wrapper] Pilot exit status: 0
[2024-04-26 22:08:33] 2024-04-26 20:08:32,959 [wrapper] pandaids: 6185303569
[2024-04-26 22:08:33] 2024-04-26 20:08:33,085 [wrapper] cleanup: SIGTERM to supervisor_pilot 4072655 3117196
[2024-04-26 22:08:33] 2024-04-26 20:08:33,088 [wrapper] Test setup, not cleaning
[2024-04-26 22:08:33] 2024-04-26 20:08:33,095 [wrapper] ==== wrapper stdout END ====
[2024-04-26 22:08:33] 2024-04-26 20:08:33,102 [wrapper] ==== wrapper stderr END ====
[2024-04-26 22:08:33] 2024-04-26 20:08:33,109 [wrapper] apfmon messages muted
[2024-04-26 22:08:33]  *** Error codes and diagnostics ***
[2024-04-26 22:08:33]     "exeErrorCode": 0,
[2024-04-26 22:08:33]     "exeErrorDiag": "",
[2024-04-26 22:08:33]     "pilotErrorCode": 0,
[2024-04-26 22:08:33]     "pilotErrorDiag": "",
[2024-04-26 22:08:33]  *** Listing of results directory ***
[2024-04-26 22:08:33] total 614572
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc    462745 Apr 24 20:27 pilot3.tar.gz
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc      6720 Apr 24 20:52 queuedata.json
[2024-04-26 22:08:33] -rwx------ 1 boinc boinc     32211 Apr 24 20:52 runpilot2-wrapper.sh
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc       100 Apr 26 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 22:08:33] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 19:12 run_atlas
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc       105 Apr 26 19:12 job.xml
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc      6644 Apr 26 19:12 init_data.xml
[2024-04-26 22:08:33] -rw-r--r-- 2 boinc boinc 448259616 Apr 26 19:12 EVNT.38204277._000876.pool.root.1
[2024-04-26 22:08:33] -rw-r--r-- 2 boinc boinc     17537 Apr 26 19:12 start_atlas.sh
[2024-04-26 22:08:33] drwxrwx--x 2 boinc boinc      4096 Apr 26 19:12 shared
[2024-04-26 22:08:33] -rw-r--r-- 2 boinc boinc    474800 Apr 26 19:12 input.tar.gz
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc         0 Apr 26 19:12 boinc_lockfile
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc      2583 Apr 26 19:12 pandaJob.out
[2024-04-26 22:08:33] -rw------- 1 boinc boinc       424 Apr 26 19:12 setup.sh.local
[2024-04-26 22:08:33] -rw------- 1 boinc boinc    997397 Apr 26 19:12 agis_schedconf.cvmfs.json
[2024-04-26 22:08:33] -rw------- 1 boinc boinc         0 Apr 26 19:12 agis_ddmendpoints.agis.ALL.json
[2024-04-26 22:08:33] -rw------- 1 boinc boinc   1315307 Apr 26 19:12 cric_ddmendpoints.json
[2024-04-26 22:08:33] drwx------ 4 boinc boinc      4096 Apr 26 19:12 pilot3
[2024-04-26 22:08:33] -rw------- 1 boinc boinc        95 Apr 26 22:07 pilot_heartbeat.json
[2024-04-26 22:08:33] -rw------- 1 boinc boinc 174988897 Apr 26 22:07 HITS.38204279._025502.pool.root.1
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc       531 Apr 26 22:07 boinc_task_state.xml
[2024-04-26 22:08:33] -rw------- 1 boinc boinc      1044 Apr 26 22:07 memory_monitor_summary.json
[2024-04-26 22:08:33] -rw------- 1 boinc boinc    305310 Apr 26 22:08 log.38204279._025502.job.log.tgz.1
[2024-04-26 22:08:33] -rw------- 1 boinc boinc      7700 Apr 26 22:08 heartbeat.json
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc      8192 Apr 26 22:08 boinc_mmap_file
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc        28 Apr 26 22:08 wrapper_checkpoint.txt
[2024-04-26 22:08:33] -rw------- 1 boinc boinc      4294 Apr 26 22:08 pilotlog.txt
[2024-04-26 22:08:33] -rw------- 1 boinc boinc    989125 Apr 26 22:08 log.38204279._025502.job.log.1
[2024-04-26 22:08:33] -rw------- 1 boinc boinc       357 Apr 26 22:08 output.list
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc       620 Apr 26 22:08 runtime_log
[2024-04-26 22:08:33] -rw------- 1 boinc boinc   1310720 Apr 26 22:08 result.tar.gz
[2024-04-26 22:08:33] -rw------- 1 boinc boinc       658 Apr 26 22:08 uH7KDmFuwJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm6ZNKDmj1bwEo.diag
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc     11410 Apr 26 22:08 runtime_log.err
[2024-04-26 22:08:33] -rw-r--r-- 1 boinc boinc     21291 Apr 26 22:08 stderr.txt
[2024-04-26 22:08:33] HITS file was successfully produced:
[2024-04-26 22:08:33] -rw------- 1 boinc boinc 174988897 Apr 26 22:07 shared/HITS.pool.root.1
[2024-04-26 22:08:33]  *** Contents of shared directory: ***
[2024-04-26 22:08:33] total 610416
[2024-04-26 22:08:33] -rw-r--r-- 2 boinc boinc 448259616 Apr 26 19:12 ATLAS.root_0
[2024-04-26 22:08:33] -rw-r--r-- 2 boinc boinc     17537 Apr 26 19:12 start_atlas.sh
[2024-04-26 22:08:33] -rw-r--r-- 2 boinc boinc    474800 Apr 26 19:12 input.tar.gz
[2024-04-26 22:08:33] -rw------- 1 boinc boinc 174988897 Apr 26 22:07 HITS.pool.root.1
[2024-04-26 22:08:33] -rw------- 1 boinc boinc   1310720 Apr 26 22:08 result.tar.gz
22:08:35 (3112547): run_atlas exited; CPU time 39024.962673
22:08:35 (3112547): called boinc_finish(0)

</stderr_txt>
]]>

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