Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:28:05 (4046100): wrapper (7.7.26015): starting
21:28:05 (4046100): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 21:28:05] Arguments: --nthreads 4
[2024-04-26 21:28:05] Threads: 4
[2024-04-26 21:28:05] Checking for CVMFS
[2024-04-26 21:28:05] No cvmfs_config command found, will try listing directly
[2024-04-26 21:28:05] CVMFS is ok
[2024-04-26 21:28:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 21:28:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 21:28:05] Further information can be found at the LHC@home message board.
[2024-04-26 21:28:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 21:28:05] Checking for apptainer binary...
[2024-04-26 21:28:05] which: no apptainer in ((null))
[2024-04-26 21:28:05] apptainer is not installed, using version from CVMFS
[2024-04-26 21:28:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 21:28:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-04-26 21:28:06] apptainer works
[2024-04-26 21:28:06] Set ATHENA_PROC_NUMBER=4
[2024-04-26 21:28:06] Set ATHENA_CORE_NUMBER=4
[2024-04-26 21:28:06] Starting ATLAS job with PandaID=6185041050
[2024-04-26 21:28:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 01:19:47]  *** The last 200 lines of the pilot log: ***
[2024-04-27 01:19:47]  domain=
[2024-04-27 01:19:47]  filesize=341945
[2024-04-27 01:19:47]  filetype=log
[2024-04-27 01:19:47]  guid=6c0bc21f-aa8b-4620-afda-92dc07c0a6f8
[2024-04-27 01:19:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 01:19:47]  is_tar=False
[2024-04-27 01:19:47]  lfn=log.38207267._003246.job.log.tgz.1
[2024-04-27 01:19:47]  mtime=0
[2024-04-27 01:19:47]  protocol_id=None
[2024-04-27 01:19:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 01:19:47]  replicas=None
[2024-04-27 01:19:47]  scope=mc23_13p6TeV
[2024-04-27 01:19:47]  status=None
[2024-04-27 01:19:47]  status_code=0
[2024-04-27 01:19:47]  storage_token=
[2024-04-27 01:19:47]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185041050/log.38207267._003246.job.log.tgz.1
[2024-04-27 01:19:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/9c/log.38207267._003246.job.log.tgz.1
[2024-04-27 01:19:47]  workdir=None
[2024-04-27 01:19:47] ]
[2024-04-27 01:19:47] 2024-04-26 23:19:17,996 | INFO     | transferring file log.38207267._003246.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185041050/log.38207267._003246.job.log.tgz.1 to /scratch/b
[2024-04-27 01:19:47] 2024-04-26 23:19:17,996 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185041050/log.38207267._003246.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2024-04-27 01:19:47] 2024-04-26 23:19:18,013 | INFO     | adding to output.list: log.38207267._003246.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/9c/log.38207267._003246.job.log.tg
[2024-04-27 01:19:47] 2024-04-26 23:19:18,013 | INFO     | summary of transferred files:
[2024-04-27 01:19:47] 2024-04-26 23:19:18,013 | INFO     |  -- lfn=log.38207267._003246.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 01:19:47] 2024-04-26 23:19:18,014 | INFO     | stage-out finished correctly
[2024-04-27 01:19:47] 2024-04-26 23:19:21,207 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 01:19:47] 2024-04-26 23:19:21,280 | WARNING  | process 4057508 is no longer using CPU - aborting
[2024-04-27 01:19:47] 2024-04-26 23:19:21,281 | INFO     | will not send any job update
[2024-04-27 01:19:47] 2024-04-26 23:19:23,345 | INFO     | job 6185041050 has state=finished
[2024-04-27 01:19:47] 2024-04-26 23:19:23,345 | INFO     | preparing for final server update for job 6185041050 in state='finished'
[2024-04-27 01:19:47] 2024-04-26 23:19:23,347 | INFO     | this job has now completed (state=finished)
[2024-04-27 01:19:47] 2024-04-26 23:19:23,347 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 01:19:47] 2024-04-26 23:19:23,347 | INFO     | job 6185041050 has finished - writing final server update
[2024-04-27 01:19:47] 2024-04-26 23:19:23,347 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3165612/.job.ad'
[2024-04-27 01:19:47] 2024-04-26 23:19:23,347 | INFO     | total number of processed events: 400 (read)
[2024-04-27 01:19:47] 2024-04-26 23:19:23,350 | INFO     | executing command: lscpu
[2024-04-27 01:19:47] 2024-04-26 23:19:23,398 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-27 01:19:47] 2024-04-26 23:19:23,399 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 01:19:47] 2024-04-26 23:19:23,429 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 01:19:47] 2024-04-26 23:19:23,783 | INFO     | monitor loop #1066: job 0:6185041050 is in state 'finished'
[2024-04-27 01:19:47] 2024-04-26 23:19:23,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,287 | INFO     | monitor loop #1067: job 0:6185041050 is in state 'finished'
[2024-04-27 01:19:47] 2024-04-26 23:19:26,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,416 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-27 01:19:47] 2024-04-26 23:19:26,416 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6185041050/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,417 | INFO     | extracted standard info from prmon json
[2024-04-27 01:19:47] 2024-04-26 23:19:26,417 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 01:19:47] 2024-04-26 23:19:26,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 01:19:47] 2024-04-26 23:19:26,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 01:19:47] 2024-04-26 23:19:26,419 | INFO     | fitting pss+swap vs Time
[2024-04-27 01:19:47] 2024-04-26 23:19:26,422 | INFO     | current chi2=3.79459073392535 (change=-0.04373022472004172 %)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,422 | INFO     | right removable region: 221
[2024-04-27 01:19:47] 2024-04-26 23:19:26,423 | INFO     | current chi2=1.4525940558484967 (change=61.70260825493341 %)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,423 | INFO     | current chi2=0.05118431330461156 (change=96.47635118025363 %)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,424 | INFO     | current chi2=0.012593275709363147 (change=75.39622025518406 %)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,425 | INFO     | current chi2=0.010826869871824784 (change=14.026579567578548 %)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,425 | INFO     | left removable region: 40
[2024-04-27 01:19:47] 2024-04-26 23:19:26,426 | INFO     | current memory leak: 1.32 B/s (using 181 data points, chi2=0.00)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,426 | INFO     | ..............................
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | . Timing measurements:
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | . get job = 0 s
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | . initial setup = 1 s
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | . payload setup = 4 s
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | . stage-in = 0 s
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | . payload execution = 13838 s
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | . stage-out = 0 s
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | . log creation = 0 s
[2024-04-27 01:19:47] 2024-04-26 23:19:26,427 | INFO     | ..............................
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | 
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | job summary report
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | --------------------------------------------------
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | PanDA job id: 6185041050
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | task id: 38207267
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | errors: (none)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | pilot state: finished 
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | transexitcode: 0
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | exeerrorcode: 0
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | exeerrordiag: 
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | exitcode: 0
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | exitmsg: OK
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | cpuconsumptiontime: 52561 s
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | nevents: 400
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | neventsw: 0
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | pid: 4057508
[2024-04-27 01:19:47] 2024-04-26 23:19:26,489 | INFO     | pgrp: 4057508
[2024-04-27 01:19:47] 2024-04-26 23:19:26,490 | INFO     | corecount: 4
[2024-04-27 01:19:47] 2024-04-26 23:19:26,490 | INFO     | event service: False
[2024-04-27 01:19:47] 2024-04-26 23:19:26,490 | INFO     | sizes: {0: 2375477, 1: 2375676, 5: 2375882, 11: 2375938, 13847: 2406447, 13848: 2415429, 13851: 2415613, 13856: 2415783}
[2024-04-27 01:19:47] 2024-04-26 23:19:26,490 | INFO     | --------------------------------------------------
[2024-04-27 01:19:47] 2024-04-26 23:19:26,490 | INFO     | 
[2024-04-27 01:19:47] 2024-04-26 23:19:26,490 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-04-27 01:19:47] 2024-04-26 23:19:26,508 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,508 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,508 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,508 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | job 6185041050 has completed (purged errors)
[2024-04-27 01:19:47] 2024-04-26 23:19:26,509 | INFO     | overall cleanup function is called
[2024-04-27 01:19:47] 2024-04-26 23:19:27,515 | INFO     | --- collectZombieJob: --- 10, [4057508]
[2024-04-27 01:19:47] 2024-04-26 23:19:27,516 | INFO     | zombie collector waiting for pid 4057508
[2024-04-27 01:19:47] 2024-04-26 23:19:27,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 01:19:47] 2024-04-26 23:19:28,520 | INFO     | collected zombie processes
[2024-04-27 01:19:47] 2024-04-26 23:19:28,521 | INFO     | will now attempt to kill all subprocesses of pid=4057508
[2024-04-27 01:19:47] 2024-04-26 23:19:28,689 | INFO     | process IDs to be killed: [4057508] (in reverse order)
[2024-04-27 01:19:47] 2024-04-26 23:19:28,776 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 01:19:47] 2024-04-26 23:19:28,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 01:19:47] 2024-04-26 23:19:28,782 | INFO     | did not find any defunct processes belonging to 4057508
[2024-04-27 01:19:47] 2024-04-26 23:19:28,787 | INFO     | did not find any defunct processes belonging to 4057508
[2024-04-27 01:19:47] 2024-04-26 23:19:28,788 | INFO     | ready for new job
[2024-04-27 01:19:47] 2024-04-26 23:19:28,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 01:19:47] 2024-04-26 23:19:28,789 | INFO     | *************************************
[2024-04-27 01:19:47] 2024-04-26 23:19:28,789 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 01:19:47] 2024-04-26 23:19:28,789 | INFO     | *************************************
[2024-04-27 01:19:47] 2024-04-26 23:19:28,789 | INFO     | 
[2024-04-27 01:19:47] 2024-04-26 23:19:28,792 | INFO     | architecture information:
[2024-04-27 01:19:47] 2024-04-26 23:19:28,792 | INFO     | executing command: cat /etc/os-release
[2024-04-27 01:19:47] 2024-04-26 23:19:28,804 | INFO     | cat /etc/os-release:
[2024-04-27 01:19:47] NAME="CentOS Linux"
[2024-04-27 01:19:47] VERSION="7 (Core)"
[2024-04-27 01:19:47] ID="centos"
[2024-04-27 01:19:47] ID_LIKE="rhel fedora"
[2024-04-27 01:19:47] VERSION_ID="7"
[2024-04-27 01:19:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 01:19:47] ANSI_COLOR="0;31"
[2024-04-27 01:19:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 01:19:47] HOME_URL="https://www.centos.org/"
[2024-04-27 01:19:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 01:19:47] 
[2024-04-27 01:19:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 01:19:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 01:19:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 01:19:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 01:19:47] 
[2024-04-27 01:19:47] 2024-04-26 23:19:28,805 | INFO     | *************************************
[2024-04-27 01:19:47] 2024-04-26 23:19:29,307 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-04-27 01:19:47] 2024-04-26 23:19:29,322 | INFO     | sufficient remaining disk space (612195368960 B)
[2024-04-27 01:19:47] 2024-04-26 23:19:29,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 01:19:47] 2024-04-26 23:19:29,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 01:19:47] 2024-04-26 23:19:29,323 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 01:19:47] 2024-04-26 23:19:29,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 01:19:47] 2024-04-26 23:19:29,324 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 01:19:47] 2024-04-26 23:19:29,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 01:19:47] 2024-04-26 23:19:29,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 01:19:47] 2024-04-26 23:19:29,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 01:19:47] 2024-04-26 23:19:29,796 | INFO     | aborting loop
[2024-04-27 01:19:47] 2024-04-26 23:19:29,913 | INFO     | all job control threads have been joined
[2024-04-27 01:19:47] 2024-04-26 23:19:29,969 | INFO     | all data control threads have been joined
[2024-04-27 01:19:47] 2024-04-26 23:19:30,011 | INFO     | all payload control threads have been joined
[2024-04-27 01:19:47] 2024-04-26 23:19:30,328 | INFO     | [job] retrieve thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:30,395 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:30,801 | INFO     | [job] job monitor thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:30,917 | INFO     | [job] control thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:30,974 | INFO     | [data] control thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:31,017 | INFO     | [payload] control thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:31,019 | INFO     | [payload] validate_post thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:31,285 | INFO     | [data] copytool_in thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:31,308 | INFO     | [payload] failed_post thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:31,328 | INFO     | [data] copytool_out thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:31,457 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:31,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 01:19:47] 2024-04-26 23:19:31,659 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:31,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 01:19:47] 2024-04-26 23:19:31,775 | INFO     | [job] validate thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:32,504 | INFO     | [job] queue monitor thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:35,773 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:39,917 | INFO     | job.realtimelogging is not enabled
[2024-04-27 01:19:47] 2024-04-26 23:19:40,923 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 01:19:47] 2024-04-26 23:19:41,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47421800174656)>', '<ExcThread(monitor, started 47421973509888)>']
[2024-04-27 01:19:47] 2024-04-26 23:19:41,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 01:19:47] 2024-04-26 23:19:41,383 | INFO     | [monitor] control thread has ended
[2024-04-27 01:19:47] 2024-04-26 23:19:46,334 | INFO     | all workflow threads have been joined
[2024-04-27 01:19:47] 2024-04-26 23:19:46,335 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 01:19:47] 2024-04-26 23:19:46,335 | INFO     | traces error code: 0
[2024-04-27 01:19:47] 2024-04-26 23:19:46,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 01:19:47] 2024-04-26 23:19:46,405 [wrapper] ==== pilot stdout END ====
[2024-04-27 01:19:47] 2024-04-26 23:19:46,407 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 01:19:47] 2024-04-26 23:19:46,409 [wrapper] pilotpid: 4050440
[2024-04-27 01:19:47] 2024-04-26 23:19:46,411 [wrapper] Pilot exit status: 0
[2024-04-27 01:19:47] 2024-04-26 23:19:46,417 [wrapper] pandaids: 6185041050
[2024-04-27 01:19:47] 2024-04-26 23:19:46,473 [wrapper] cleanup: SIGTERM to supervisor_pilot  574081 4050441
[2024-04-27 01:19:47] 2024-04-26 23:19:46,475 [wrapper] Test setup, not cleaning
[2024-04-27 01:19:47] 2024-04-26 23:19:46,477 [wrapper] ==== wrapper stdout END ====
[2024-04-27 01:19:47] 2024-04-26 23:19:46,478 [wrapper] ==== wrapper stderr END ====
[2024-04-27 01:19:47] 2024-04-26 23:19:46,482 [wrapper] apfmon messages muted
[2024-04-27 01:19:47]  *** Error codes and diagnostics ***
[2024-04-27 01:19:47]     "exeErrorCode": 0,
[2024-04-27 01:19:47]     "exeErrorDiag": "",
[2024-04-27 01:19:47]     "pilotErrorCode": 0,
[2024-04-27 01:19:47]     "pilotErrorDiag": "",
[2024-04-27 01:19:47]  *** Listing of results directory ***
[2024-04-27 01:19:47] total 795992
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc    462745 Apr 24 14:35 pilot3.tar.gz
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc      6720 Apr 24 14:52 queuedata.json
[2024-04-27 01:19:47] -rwx------ 1 boinc boinc     32211 Apr 24 14:52 runpilot2-wrapper.sh
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc       100 Apr 26 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 01:19:47] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 21:27 run_atlas
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc       105 Apr 26 21:27 job.xml
[2024-04-27 01:19:47] -rw-r--r-- 2 boinc boinc 573245569 Apr 26 21:28 EVNT.38207265._000123.pool.root.1
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc      6663 Apr 26 21:28 init_data.xml
[2024-04-27 01:19:47] -rw-r--r-- 2 boinc boinc     17537 Apr 26 21:28 start_atlas.sh
[2024-04-27 01:19:47] drwxrwx--x 2 boinc boinc      4096 Apr 26 21:28 shared
[2024-04-27 01:19:47] -rw-r--r-- 2 boinc boinc    474805 Apr 26 21:28 input.tar.gz
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc         0 Apr 26 21:28 boinc_lockfile
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc      2595 Apr 26 21:28 pandaJob.out
[2024-04-27 01:19:47] -rw------- 1 boinc boinc       424 Apr 26 21:28 setup.sh.local
[2024-04-27 01:19:47] -rw------- 1 boinc boinc    997375 Apr 26 21:28 agis_schedconf.cvmfs.json
[2024-04-27 01:19:47] -rw------- 1 boinc boinc   1315307 Apr 26 21:28 cric_ddmendpoints.json
[2024-04-27 01:19:47] drwx------ 4 boinc boinc      4096 Apr 26 21:28 pilot3
[2024-04-27 01:19:47] -rw------- 1 boinc boinc 235060598 Apr 27 01:18 HITS.38207267._003246.pool.root.1
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc       531 Apr 27 01:18 boinc_task_state.xml
[2024-04-27 01:19:47] -rw------- 1 boinc boinc        95 Apr 27 01:18 pilot_heartbeat.json
[2024-04-27 01:19:47] -rw------- 1 boinc boinc      1050 Apr 27 01:19 memory_monitor_summary.json
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc      8192 Apr 27 01:19 boinc_mmap_file
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc        28 Apr 27 01:19 wrapper_checkpoint.txt
[2024-04-27 01:19:47] -rw------- 1 boinc boinc         0 Apr 27 01:19 agis_ddmendpoints.agis.ALL.json
[2024-04-27 01:19:47] -rw------- 1 boinc boinc    341945 Apr 27 01:19 log.38207267._003246.job.log.tgz.1
[2024-04-27 01:19:47] -rw------- 1 boinc boinc      7739 Apr 27 01:19 heartbeat.json
[2024-04-27 01:19:47] -rw------- 1 boinc boinc      4416 Apr 27 01:19 pilotlog.txt
[2024-04-27 01:19:47] -rw------- 1 boinc boinc   1310122 Apr 27 01:19 log.38207267._003246.job.log.1
[2024-04-27 01:19:47] -rw------- 1 boinc boinc       357 Apr 27 01:19 output.list
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc       620 Apr 27 01:19 runtime_log
[2024-04-27 01:19:47] -rw------- 1 boinc boinc   1669120 Apr 27 01:19 result.tar.gz
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc     11410 Apr 27 01:19 runtime_log.err
[2024-04-27 01:19:47] -rw------- 1 boinc boinc       657 Apr 27 01:19 Uv6LDmLIrJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDmvNNKDm0aBDen.diag
[2024-04-27 01:19:47] -rw-r--r-- 1 boinc boinc     21172 Apr 27 01:19 stderr.txt
[2024-04-27 01:19:47] HITS file was successfully produced:
[2024-04-27 01:19:47] -rw------- 1 boinc boinc 235060598 Apr 27 01:18 shared/HITS.pool.root.1
[2024-04-27 01:19:47]  *** Contents of shared directory: ***
[2024-04-27 01:19:47] total 791488
[2024-04-27 01:19:47] -rw-r--r-- 2 boinc boinc 573245569 Apr 26 21:28 ATLAS.root_0
[2024-04-27 01:19:47] -rw-r--r-- 2 boinc boinc     17537 Apr 26 21:28 start_atlas.sh
[2024-04-27 01:19:47] -rw-r--r-- 2 boinc boinc    474805 Apr 26 21:28 input.tar.gz
[2024-04-27 01:19:47] -rw------- 1 boinc boinc 235060598 Apr 27 01:18 HITS.pool.root.1
[2024-04-27 01:19:47] -rw------- 1 boinc boinc   1669120 Apr 27 01:19 result.tar.gz
01:19:48 (4046100): run_atlas exited; CPU time 52274.499739
01:19:48 (4046100): called boinc_finish(0)

</stderr_txt>
]]>

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