Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:51 (3557554): wrapper (7.7.26015): starting
17:31:51 (3557554): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 17:31:51] Arguments: --nthreads 4
[2024-04-26 17:31:51] Threads: 4
[2024-04-26 17:31:51] Checking for CVMFS
[2024-04-26 17:31:51] No cvmfs_config command found, will try listing directly
[2024-04-26 17:31:51] CVMFS is ok
[2024-04-26 17:31:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 17:31:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 17:31:51] Further information can be found at the LHC@home message board.
[2024-04-26 17:31:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 17:31:51] Checking for apptainer binary...
[2024-04-26 17:31:51] which: no apptainer in ((null))
[2024-04-26 17:31:51] apptainer is not installed, using version from CVMFS
[2024-04-26 17:31:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 17:31:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-04-26 17:31:52] apptainer works
[2024-04-26 17:31:52] Set ATHENA_PROC_NUMBER=4
[2024-04-26 17:31:52] Set ATHENA_CORE_NUMBER=4
[2024-04-26 17:31:52] Starting ATLAS job with PandaID=6185133310
[2024-04-26 17:31:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 20:22:07]  *** The last 200 lines of the pilot log: ***
[2024-04-26 20:22:07]  direct_access_wan=False
[2024-04-26 20:22:07]  domain=
[2024-04-26 20:22:07]  filesize=279428
[2024-04-26 20:22:07]  filetype=log
[2024-04-26 20:22:07]  guid=422ae1a8-28e3-41c5-9971-0d3f3511adff
[2024-04-26 20:22:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 20:22:07]  is_tar=False
[2024-04-26 20:22:07]  lfn=log.38204327._003062.job.log.tgz.1
[2024-04-26 20:22:07]  mtime=0
[2024-04-26 20:22:07]  protocol_id=None
[2024-04-26 20:22:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 20:22:07]  replicas=None
[2024-04-26 20:22:07]  scope=mc23_13p6TeV
[2024-04-26 20:22:07]  status=None
[2024-04-26 20:22:07]  status_code=0
[2024-04-26 20:22:07]  storage_token=
[2024-04-26 20:22:07]  surl=/scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6185133310/log.38204327._003062.job.log.tgz.1
[2024-04-26 20:22:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/b2/log.38204327._003062.job.log.tgz.1
[2024-04-26 20:22:07]  workdir=None
[2024-04-26 20:22:07] ]
[2024-04-26 20:22:07] 2024-04-26 18:21:40,897 | INFO     | transferring file log.38204327._003062.job.log.tgz.1 from /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6185133310/log.38204327._003062.job.log.tgz.1 to /scratch/b
[2024-04-26 20:22:07] 2024-04-26 18:21:40,897 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6185133310/log.38204327._003062.job.log.tgz.1 /scratch/boinc/var/slot44/slots/0/lo
[2024-04-26 20:22:07] 2024-04-26 18:21:40,916 | INFO     | adding to output.list: log.38204327._003062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/b2/log.38204327._003062.job.log.tg
[2024-04-26 20:22:07] 2024-04-26 18:21:40,917 | INFO     | summary of transferred files:
[2024-04-26 20:22:07] 2024-04-26 18:21:40,917 | INFO     |  -- lfn=log.38204327._003062.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 20:22:07] 2024-04-26 18:21:40,917 | INFO     | stage-out finished correctly
[2024-04-26 20:22:07] 2024-04-26 18:21:42,733 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 20:22:07] 2024-04-26 18:21:42,849 | INFO     | monitor loop #788: job 0:6185133310 is in state 'finished'
[2024-04-26 20:22:07] 2024-04-26 18:21:42,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 20:22:07] 2024-04-26 18:21:43,463 | INFO     | job 6185133310 has state=finished
[2024-04-26 20:22:07] 2024-04-26 18:21:43,464 | INFO     | preparing for final server update for job 6185133310 in state='finished'
[2024-04-26 20:22:07] 2024-04-26 18:21:43,464 | INFO     | this job has now completed (state=finished)
[2024-04-26 20:22:07] 2024-04-26 18:21:43,464 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 20:22:07] 2024-04-26 18:21:43,464 | INFO     | job 6185133310 has finished - writing final server update
[2024-04-26 20:22:07] 2024-04-26 18:21:43,465 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4022361/.job.ad'
[2024-04-26 20:22:07] 2024-04-26 18:21:43,465 | INFO     | total number of processed events: 400 (read)
[2024-04-26 20:22:07] 2024-04-26 18:21:43,468 | INFO     | executing command: lscpu
[2024-04-26 20:22:07] 2024-04-26 18:21:43,515 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 20:22:07] 2024-04-26 18:21:43,515 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 20:22:07] 2024-04-26 18:21:43,554 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 20:22:07] 2024-04-26 18:21:45,352 | INFO     | monitor loop #789: job 0:6185133310 is in state 'finished'
[2024-04-26 20:22:07] 2024-04-26 18:21:45,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 20:22:07] 2024-04-26 18:21:46,622 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 20:22:07] 2024-04-26 18:21:46,622 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6185133310/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 20:22:07] 2024-04-26 18:21:46,623 | INFO     | extracted standard info from prmon json
[2024-04-26 20:22:07] 2024-04-26 18:21:46,623 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 20:22:07] 2024-04-26 18:21:46,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 20:22:07] 2024-04-26 18:21:46,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 20:22:07] 2024-04-26 18:21:46,627 | INFO     | fitting pss+swap vs Time
[2024-04-26 20:22:07] 2024-04-26 18:21:46,630 | INFO     | current chi2=3.7019638158017316 (change=18.448875357210948 %)
[2024-04-26 20:22:07] 2024-04-26 18:21:46,630 | INFO     | right removable region: 161
[2024-04-26 20:22:07] 2024-04-26 18:21:46,631 | INFO     | current chi2=2.3065607300173383 (change=49.1884224294966 %)
[2024-04-26 20:22:07] 2024-04-26 18:21:46,632 | INFO     | current chi2=0.9907164462664952 (change=57.047892415169656 %)
[2024-04-26 20:22:07] 2024-04-26 18:21:46,632 | INFO     | current chi2=0.936607480339773 (change=5.461599646461032 %)
[2024-04-26 20:22:07] 2024-04-26 18:21:46,632 | INFO     | left removable region: 30
[2024-04-26 20:22:07] 2024-04-26 18:21:46,633 | INFO     | current memory leak: -8.50 B/s (using 131 data points, chi2=0.03)
[2024-04-26 20:22:07] 2024-04-26 18:21:46,633 | INFO     | ..............................
[2024-04-26 20:22:07] 2024-04-26 18:21:46,633 | INFO     | . Timing measurements:
[2024-04-26 20:22:07] 2024-04-26 18:21:46,633 | INFO     | . get job = 0 s
[2024-04-26 20:22:07] 2024-04-26 18:21:46,633 | INFO     | . initial setup = 2 s
[2024-04-26 20:22:07] 2024-04-26 18:21:46,633 | INFO     | . payload setup = 5 s
[2024-04-26 20:22:07] 2024-04-26 18:21:46,634 | INFO     | . stage-in = 0 s
[2024-04-26 20:22:07] 2024-04-26 18:21:46,634 | INFO     | . payload execution = 10154 s
[2024-04-26 20:22:07] 2024-04-26 18:21:46,634 | INFO     | . stage-out = 0 s
[2024-04-26 20:22:07] 2024-04-26 18:21:46,634 | INFO     | . log creation = 0 s
[2024-04-26 20:22:07] 2024-04-26 18:21:46,634 | INFO     | ..............................
[2024-04-26 20:22:07] 2024-04-26 18:21:47,112 | INFO     | 
[2024-04-26 20:22:07] 2024-04-26 18:21:47,112 | INFO     | job summary report
[2024-04-26 20:22:07] 2024-04-26 18:21:47,112 | INFO     | --------------------------------------------------
[2024-04-26 20:22:07] 2024-04-26 18:21:47,112 | INFO     | PanDA job id: 6185133310
[2024-04-26 20:22:07] 2024-04-26 18:21:47,112 | INFO     | task id: 38204327
[2024-04-26 20:22:07] 2024-04-26 18:21:47,112 | INFO     | errors: (none)
[2024-04-26 20:22:07] 2024-04-26 18:21:47,112 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | pilot state: finished 
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | transexitcode: 0
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | exeerrorcode: 0
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | exeerrordiag: 
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | exitcode: 0
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | exitmsg: OK
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | cpuconsumptiontime: 37993 s
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | nevents: 400
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | neventsw: 0
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | pid: 3568958
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | pgrp: 3568958
[2024-04-26 20:22:07] 2024-04-26 18:21:47,113 | INFO     | corecount: 4
[2024-04-26 20:22:07] 2024-04-26 18:21:47,114 | INFO     | event service: False
[2024-04-26 20:22:07] 2024-04-26 18:21:47,114 | INFO     | sizes: {0: 2375754, 4: 2375960, 11: 2375988, 10163: 2404818, 10164: 2413800, 10166: 2413856, 10170: 2414154}
[2024-04-26 20:22:07] 2024-04-26 18:21:47,114 | INFO     | --------------------------------------------------
[2024-04-26 20:22:07] 2024-04-26 18:21:47,114 | INFO     | 
[2024-04-26 20:22:07] 2024-04-26 18:21:47,114 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2024-04-26 20:22:07] 2024-04-26 18:21:47,133 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,135 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 20:22:07] 2024-04-26 18:21:47,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,135 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 20:22:07] 2024-04-26 18:21:47,135 | INFO     | job 6185133310 has completed (purged errors)
[2024-04-26 20:22:07] 2024-04-26 18:21:47,135 | INFO     | overall cleanup function is called
[2024-04-26 20:22:07] 2024-04-26 18:21:48,142 | INFO     | --- collectZombieJob: --- 10, [3568958]
[2024-04-26 20:22:07] 2024-04-26 18:21:48,142 | INFO     | zombie collector waiting for pid 3568958
[2024-04-26 20:22:07] 2024-04-26 18:21:48,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 20:22:07] 2024-04-26 18:21:49,147 | INFO     | collected zombie processes
[2024-04-26 20:22:07] 2024-04-26 18:21:49,147 | INFO     | will now attempt to kill all subprocesses of pid=3568958
[2024-04-26 20:22:07] 2024-04-26 18:21:49,290 | INFO     | process IDs to be killed: [3568958] (in reverse order)
[2024-04-26 20:22:07] 2024-04-26 18:21:49,385 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 20:22:07] 2024-04-26 18:21:49,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 20:22:07] 2024-04-26 18:21:49,391 | INFO     | did not find any defunct processes belonging to 3568958
[2024-04-26 20:22:07] 2024-04-26 18:21:49,396 | INFO     | did not find any defunct processes belonging to 3568958
[2024-04-26 20:22:07] 2024-04-26 18:21:49,397 | INFO     | ready for new job
[2024-04-26 20:22:07] 2024-04-26 18:21:49,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 20:22:07] 2024-04-26 18:21:49,398 | INFO     | *************************************
[2024-04-26 20:22:07] 2024-04-26 18:21:49,398 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 20:22:07] 2024-04-26 18:21:49,398 | INFO     | *************************************
[2024-04-26 20:22:07] 2024-04-26 18:21:49,398 | INFO     | 
[2024-04-26 20:22:07] 2024-04-26 18:21:49,401 | INFO     | architecture information:
[2024-04-26 20:22:07] 2024-04-26 18:21:49,401 | INFO     | executing command: cat /etc/os-release
[2024-04-26 20:22:07] 2024-04-26 18:21:49,436 | INFO     | cat /etc/os-release:
[2024-04-26 20:22:07] NAME="CentOS Linux"
[2024-04-26 20:22:07] VERSION="7 (Core)"
[2024-04-26 20:22:07] ID="centos"
[2024-04-26 20:22:07] ID_LIKE="rhel fedora"
[2024-04-26 20:22:07] VERSION_ID="7"
[2024-04-26 20:22:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 20:22:07] ANSI_COLOR="0;31"
[2024-04-26 20:22:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 20:22:07] HOME_URL="https://www.centos.org/"
[2024-04-26 20:22:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 20:22:07] 
[2024-04-26 20:22:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 20:22:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 20:22:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 20:22:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 20:22:07] 
[2024-04-26 20:22:07] 2024-04-26 18:21:49,436 | INFO     | *************************************
[2024-04-26 20:22:07] 2024-04-26 18:21:49,939 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2024-04-26 20:22:07] 2024-04-26 18:21:49,961 | INFO     | sufficient remaining disk space (616790228992 B)
[2024-04-26 20:22:07] 2024-04-26 18:21:49,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 20:22:07] 2024-04-26 18:21:49,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 20:22:07] 2024-04-26 18:21:49,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 20:22:07] 2024-04-26 18:21:49,963 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 20:22:07] 2024-04-26 18:21:49,963 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 20:22:07] 2024-04-26 18:21:49,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 20:22:07] 2024-04-26 18:21:49,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 20:22:07] 2024-04-26 18:21:50,362 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-26 20:22:07] 2024-04-26 18:21:50,363 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-26 20:22:07] 2024-04-26 18:21:50,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 20:22:07] 2024-04-26 18:21:50,363 | INFO     | will abort loop
[2024-04-26 20:22:07] 2024-04-26 18:21:50,400 | INFO     | all data control threads have been joined
[2024-04-26 20:22:07] 2024-04-26 18:21:50,967 | INFO     | [job] retrieve thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:51,049 | INFO     | all payload control threads have been joined
[2024-04-26 20:22:07] 2024-04-26 18:21:51,216 | INFO     | [job] validate thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:51,247 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:51,319 | INFO     | all job control threads have been joined
[2024-04-26 20:22:07] 2024-04-26 18:21:51,349 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:51,368 | INFO     | [job] job monitor thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:51,405 | INFO     | [data] control thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:51,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 20:22:07] 2024-04-26 18:21:51,715 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:51,968 | INFO     | [data] copytool_out thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:52,054 | INFO     | [payload] control thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:52,095 | INFO     | [data] copytool_in thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:52,121 | INFO     | [payload] failed_post thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:52,324 | INFO     | [job] control thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:52,536 | INFO     | [payload] validate_post thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:52,704 | INFO     | [job] queue monitor thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:21:53,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 20:22:07] 2024-04-26 18:21:57,298 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:22:00,224 | INFO     | job.realtimelogging is not enabled
[2024-04-26 20:22:07] 2024-04-26 18:22:01,224 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 20:22:07] 2024-04-26 18:22:01,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47351569331264)>', '<ExcThread(monitor, started 47351738455808)>']
[2024-04-26 20:22:07] 2024-04-26 18:22:02,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 20:22:07] 2024-04-26 18:22:02,023 | INFO     | [monitor] control thread has ended
[2024-04-26 20:22:07] 2024-04-26 18:22:06,270 | INFO     | all workflow threads have been joined
[2024-04-26 20:22:07] 2024-04-26 18:22:06,270 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 20:22:07] 2024-04-26 18:22:06,270 | INFO     | traces error code: 0
[2024-04-26 20:22:07] 2024-04-26 18:22:06,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 20:22:07] 2024-04-26 18:22:06,351 [wrapper] ==== pilot stdout END ====
[2024-04-26 20:22:07] 2024-04-26 18:22:06,354 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 20:22:07] 2024-04-26 18:22:06,356 [wrapper] pilotpid: 3561883
[2024-04-26 20:22:07] 2024-04-26 18:22:06,358 [wrapper] Pilot exit status: 0
[2024-04-26 20:22:07] 2024-04-26 18:22:06,367 [wrapper] pandaids: 6185133310
[2024-04-26 20:22:07] 2024-04-26 18:22:06,423 [wrapper] cleanup: SIGTERM to supervisor_pilot 3984742 3561884
[2024-04-26 20:22:07] 2024-04-26 18:22:06,426 [wrapper] Test setup, not cleaning
[2024-04-26 20:22:07] 2024-04-26 18:22:06,428 [wrapper] ==== wrapper stdout END ====
[2024-04-26 20:22:07] 2024-04-26 18:22:06,431 [wrapper] ==== wrapper stderr END ====
[2024-04-26 20:22:07] 2024-04-26 18:22:06,435 [wrapper] apfmon messages muted
[2024-04-26 20:22:07]  *** Error codes and diagnostics ***
[2024-04-26 20:22:07]     "exeErrorCode": 0,
[2024-04-26 20:22:07]     "exeErrorDiag": "",
[2024-04-26 20:22:07]     "pilotErrorCode": 0,
[2024-04-26 20:22:07]     "pilotErrorDiag": "",
[2024-04-26 20:22:07]  *** Listing of results directory ***
[2024-04-26 20:22:07] total 703672
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc      6720 Apr 24 16:16 queuedata.json
[2024-04-26 20:22:07] -rwx------ 1 boinc boinc     32211 Apr 24 16:16 runpilot2-wrapper.sh
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc    462745 Apr 24 16:16 pilot3.tar.gz
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc       100 Apr 26 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 20:22:07] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 17:31 run_atlas
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc       105 Apr 26 17:31 job.xml
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc      6663 Apr 26 17:31 init_data.xml
[2024-04-26 20:22:07] -rw-r--r-- 2 boinc boinc 518485637 Apr 26 17:31 EVNT.38204325._000087.pool.root.1
[2024-04-26 20:22:07] -rw-r--r-- 2 boinc boinc     17537 Apr 26 17:31 start_atlas.sh
[2024-04-26 20:22:07] drwxrwx--x 2 boinc boinc      4096 Apr 26 17:31 shared
[2024-04-26 20:22:07] -rw-r--r-- 2 boinc boinc    474800 Apr 26 17:31 input.tar.gz
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc         0 Apr 26 17:31 boinc_lockfile
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc      2635 Apr 26 17:31 pandaJob.out
[2024-04-26 20:22:07] -rw------- 1 boinc boinc       424 Apr 26 17:31 setup.sh.local
[2024-04-26 20:22:07] -rw------- 1 boinc boinc    997478 Apr 26 17:32 agis_schedconf.cvmfs.json
[2024-04-26 20:22:07] -rw------- 1 boinc boinc         0 Apr 26 17:32 agis_ddmendpoints.agis.ALL.json
[2024-04-26 20:22:07] -rw------- 1 boinc boinc   1315307 Apr 26 17:32 cric_ddmendpoints.json
[2024-04-26 20:22:07] drwx------ 4 boinc boinc      4096 Apr 26 17:32 pilot3
[2024-04-26 20:22:07] -rw------- 1 boinc boinc 196065739 Apr 26 20:21 HITS.38204327._003062.pool.root.1
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc       532 Apr 26 20:21 boinc_task_state.xml
[2024-04-26 20:22:07] -rw------- 1 boinc boinc        95 Apr 26 20:21 pilot_heartbeat.json
[2024-04-26 20:22:07] -rw------- 1 boinc boinc      1049 Apr 26 20:21 memory_monitor_summary.json
[2024-04-26 20:22:07] -rw------- 1 boinc boinc    279428 Apr 26 20:21 log.38204327._003062.job.log.tgz.1
[2024-04-26 20:22:07] -rw------- 1 boinc boinc      7740 Apr 26 20:21 heartbeat.json
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc      8192 Apr 26 20:22 boinc_mmap_file
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc        28 Apr 26 20:22 wrapper_checkpoint.txt
[2024-04-26 20:22:07] -rw------- 1 boinc boinc      4602 Apr 26 20:22 pilotlog.txt
[2024-04-26 20:22:07] -rw------- 1 boinc boinc    978500 Apr 26 20:22 log.38204327._003062.job.log.1
[2024-04-26 20:22:07] -rw------- 1 boinc boinc       357 Apr 26 20:22 output.list
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc       620 Apr 26 20:22 runtime_log
[2024-04-26 20:22:07] -rw------- 1 boinc boinc   1280000 Apr 26 20:22 result.tar.gz
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc     11410 Apr 26 20:22 runtime_log.err
[2024-04-26 20:22:07] -rw------- 1 boinc boinc       657 Apr 26 20:22 e9eLDmWbsJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDmc9QKDmcRhH9m.diag
[2024-04-26 20:22:07] -rw-r--r-- 1 boinc boinc     21112 Apr 26 20:22 stderr.txt
[2024-04-26 20:22:07] HITS file was successfully produced:
[2024-04-26 20:22:07] -rw------- 1 boinc boinc 196065739 Apr 26 20:21 shared/HITS.pool.root.1
[2024-04-26 20:22:07]  *** Contents of shared directory: ***
[2024-04-26 20:22:07] total 699552
[2024-04-26 20:22:07] -rw-r--r-- 2 boinc boinc 518485637 Apr 26 17:31 ATLAS.root_0
[2024-04-26 20:22:07] -rw-r--r-- 2 boinc boinc     17537 Apr 26 17:31 start_atlas.sh
[2024-04-26 20:22:07] -rw-r--r-- 2 boinc boinc    474800 Apr 26 17:31 input.tar.gz
[2024-04-26 20:22:07] -rw------- 1 boinc boinc 196065739 Apr 26 20:21 HITS.pool.root.1
[2024-04-26 20:22:07] -rw------- 1 boinc boinc   1280000 Apr 26 20:22 result.tar.gz
20:22:09 (3557554): run_atlas exited; CPU time 37772.371538
20:22:09 (3557554): called boinc_finish(0)

</stderr_txt>
]]>

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