Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:41:51 (2295264): wrapper (7.7.26015): starting
01:41:51 (2295264): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 01:41:51] Arguments: --nthreads 4
[2024-04-27 01:41:51] Threads: 4
[2024-04-27 01:41:51] Checking for CVMFS
[2024-04-27 01:41:51] No cvmfs_config command found, will try listing directly
[2024-04-27 01:41:51] CVMFS is ok
[2024-04-27 01:41:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 01:41:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 01:41:51] Further information can be found at the LHC@home message board.
[2024-04-27 01:41:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 01:41:51] Checking for apptainer binary...
[2024-04-27 01:41:51] which: no apptainer in ((null))
[2024-04-27 01:41:51] apptainer is not installed, using version from CVMFS
[2024-04-27 01:41:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 01:41:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-04-27 01:41:52] apptainer works
[2024-04-27 01:41:52] Set ATHENA_PROC_NUMBER=4
[2024-04-27 01:41:52] Set ATHENA_CORE_NUMBER=4
[2024-04-27 01:41:52] Starting ATLAS job with PandaID=6185360806
[2024-04-27 01:41:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 05:16:12]  *** The last 200 lines of the pilot log: ***
[2024-04-27 05:16:12]  filesize=313348
[2024-04-27 05:16:12]  filetype=log
[2024-04-27 05:16:12]  guid=79385528-edce-4ba9-bd48-a637d33b4e3f
[2024-04-27 05:16:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 05:16:12]  is_tar=False
[2024-04-27 05:16:12]  lfn=log.38221971._000132.job.log.tgz.1
[2024-04-27 05:16:12]  mtime=0
[2024-04-27 05:16:12]  protocol_id=None
[2024-04-27 05:16:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 05:16:12]  replicas=None
[2024-04-27 05:16:12]  scope=mc23_13p6TeV
[2024-04-27 05:16:12]  status=None
[2024-04-27 05:16:12]  status_code=0
[2024-04-27 05:16:12]  storage_token=
[2024-04-27 05:16:12]  surl=/scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6185360806/log.38221971._000132.job.log.tgz.1
[2024-04-27 05:16:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/7e/log.38221971._000132.job.log.tgz.1
[2024-04-27 05:16:12]  workdir=None
[2024-04-27 05:16:12] ]
[2024-04-27 05:16:12] 2024-04-27 03:15:42,782 | INFO     | transferring file log.38221971._000132.job.log.tgz.1 from /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6185360806/log.38221971._000132.job.log.tgz.1 to /scratch/
[2024-04-27 05:16:12] 2024-04-27 03:15:42,782 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6185360806/log.38221971._000132.job.log.tgz.1 /scratch/boinc/var/slot124/slots/0/
[2024-04-27 05:16:12] 2024-04-27 03:15:42,810 | INFO     | adding to output.list: log.38221971._000132.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/7e/log.38221971._000132.job.log.tg
[2024-04-27 05:16:12] 2024-04-27 03:15:42,811 | INFO     | summary of transferred files:
[2024-04-27 05:16:12] 2024-04-27 03:15:42,811 | INFO     |  -- lfn=log.38221971._000132.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 05:16:12] 2024-04-27 03:15:42,811 | INFO     | stage-out finished correctly
[2024-04-27 05:16:12] 2024-04-27 03:15:44,176 | INFO     | monitor loop #975: job 0:6185360806 is in state 'finished'
[2024-04-27 05:16:12] 2024-04-27 03:15:44,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 05:16:12] 2024-04-27 03:15:44,190 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 05:16:12] 2024-04-27 03:15:45,647 | INFO     | job 6185360806 has state=finished
[2024-04-27 05:16:12] 2024-04-27 03:15:45,647 | INFO     | preparing for final server update for job 6185360806 in state='finished'
[2024-04-27 05:16:12] 2024-04-27 03:15:45,657 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /scratch/boinc/var/slot124/slots/0/PanDA_Pilo
[2024-04-27 05:16:12] 2024-04-27 03:15:46,680 | INFO     | monitor loop #976: job 0:6185360806 is in state 'finished'
[2024-04-27 05:16:12] 2024-04-27 03:15:46,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 05:16:12] 2024-04-27 03:15:47,076 | INFO     | this job has now completed (state=finished)
[2024-04-27 05:16:12] 2024-04-27 03:15:47,076 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 05:16:12] 2024-04-27 03:15:47,076 | INFO     | job 6185360806 has finished - writing final server update
[2024-04-27 05:16:12] 2024-04-27 03:15:47,077 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_993248/.job.ad'
[2024-04-27 05:16:12] 2024-04-27 03:15:47,077 | INFO     | total number of processed events: 400 (read)
[2024-04-27 05:16:12] 2024-04-27 03:15:47,084 | INFO     | executing command: lscpu
[2024-04-27 05:16:12] 2024-04-27 03:15:47,130 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-27 05:16:12] 2024-04-27 03:15:47,130 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 05:16:12] 2024-04-27 03:15:47,164 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 05:16:12] 2024-04-27 03:15:49,183 | INFO     | monitor loop #977: job 0:6185360806 is in state 'finished'
[2024-04-27 05:16:12] 2024-04-27 03:15:49,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,083 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 05:16:12] 2024-04-27 03:15:51,084 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6185360806/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,085 | INFO     | extracted standard info from prmon json
[2024-04-27 05:16:12] 2024-04-27 03:15:51,085 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 05:16:12] 2024-04-27 03:15:51,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 05:16:12] 2024-04-27 03:15:51,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 05:16:12] 2024-04-27 03:15:51,089 | INFO     | fitting pss+swap vs Time
[2024-04-27 05:16:12] 2024-04-27 03:15:51,092 | INFO     | current chi2=4.195552761084138 (change=0.008028175256811314 %)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,092 | INFO     | right removable region: 204
[2024-04-27 05:16:12] 2024-04-27 03:15:51,094 | INFO     | current chi2=1.6224638422979196 (change=61.33206563137183 %)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,095 | INFO     | current chi2=0.06393366461202918 (change=96.05947060604574 %)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,096 | INFO     | current chi2=0.0008701965352292161 (change=98.63890715398553 %)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,097 | INFO     | current chi2=0.0008266005739184781 (change=5.009898286857067 %)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,098 | INFO     | left removable region: 40
[2024-04-27 05:16:12] 2024-04-27 03:15:51,099 | INFO     | current memory leak: 1.26 B/s (using 164 data points, chi2=0.00)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,099 | INFO     | ..............................
[2024-04-27 05:16:12] 2024-04-27 03:15:51,099 | INFO     | . Timing measurements:
[2024-04-27 05:16:12] 2024-04-27 03:15:51,099 | INFO     | . get job = 0 s
[2024-04-27 05:16:12] 2024-04-27 03:15:51,099 | INFO     | . initial setup = 1 s
[2024-04-27 05:16:12] 2024-04-27 03:15:51,099 | INFO     | . payload setup = 6 s
[2024-04-27 05:16:12] 2024-04-27 03:15:51,099 | INFO     | . stage-in = 0 s
[2024-04-27 05:16:12] 2024-04-27 03:15:51,100 | INFO     | . payload execution = 12791 s
[2024-04-27 05:16:12] 2024-04-27 03:15:51,100 | INFO     | . stage-out = 1 s
[2024-04-27 05:16:12] 2024-04-27 03:15:51,100 | INFO     | . log creation = 0 s
[2024-04-27 05:16:12] 2024-04-27 03:15:51,100 | INFO     | ..............................
[2024-04-27 05:16:12] 2024-04-27 03:15:51,505 | INFO     | 
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | job summary report
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | --------------------------------------------------
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | PanDA job id: 6185360806
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | task id: 38221971
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | errors: (none)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | pilot state: finished 
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | transexitcode: 0
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | exeerrorcode: 0
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | exeerrordiag: 
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | exitcode: 0
[2024-04-27 05:16:12] 2024-04-27 03:15:51,506 | INFO     | exitmsg: OK
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | cpuconsumptiontime: 48392 s
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | nevents: 400
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | neventsw: 0
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | pid: 2309759
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | pgrp: 2309759
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | corecount: 4
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | event service: False
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | sizes: {0: 2375651, 5: 2375857, 11: 2375913, 12801: 2405801, 12802: 2405800, 12803: 2414840, 12804: 2415024, 12811: 2415194}
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | --------------------------------------------------
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | 
[2024-04-27 05:16:12] 2024-04-27 03:15:51,507 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2024-04-27 05:16:12] 2024-04-27 03:15:51,528 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,528 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,528 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,528 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,530 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,530 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 05:16:12] 2024-04-27 03:15:51,530 | INFO     | job 6185360806 has completed (purged errors)
[2024-04-27 05:16:12] 2024-04-27 03:15:51,530 | INFO     | overall cleanup function is called
[2024-04-27 05:16:12] 2024-04-27 03:15:52,537 | INFO     | --- collectZombieJob: --- 10, [2309759]
[2024-04-27 05:16:12] 2024-04-27 03:15:52,538 | INFO     | zombie collector waiting for pid 2309759
[2024-04-27 05:16:12] 2024-04-27 03:15:52,538 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 05:16:12] 2024-04-27 03:15:53,542 | INFO     | collected zombie processes
[2024-04-27 05:16:12] 2024-04-27 03:15:53,543 | INFO     | will now attempt to kill all subprocesses of pid=2309759
[2024-04-27 05:16:12] 2024-04-27 03:15:53,752 | INFO     | process IDs to be killed: [2309759] (in reverse order)
[2024-04-27 05:16:12] 2024-04-27 03:15:53,897 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 05:16:12] 2024-04-27 03:15:53,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 05:16:12] 2024-04-27 03:15:53,910 | INFO     | did not find any defunct processes belonging to 2309759
[2024-04-27 05:16:12] 2024-04-27 03:15:53,921 | INFO     | did not find any defunct processes belonging to 2309759
[2024-04-27 05:16:12] 2024-04-27 03:15:53,921 | INFO     | ready for new job
[2024-04-27 05:16:12] 2024-04-27 03:15:53,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 05:16:12] 2024-04-27 03:15:53,923 | INFO     | *************************************
[2024-04-27 05:16:12] 2024-04-27 03:15:53,923 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 05:16:12] 2024-04-27 03:15:53,923 | INFO     | *************************************
[2024-04-27 05:16:12] 2024-04-27 03:15:53,923 | INFO     | 
[2024-04-27 05:16:12] 2024-04-27 03:15:53,928 | INFO     | architecture information:
[2024-04-27 05:16:12] 2024-04-27 03:15:53,929 | INFO     | executing command: cat /etc/os-release
[2024-04-27 05:16:12] 2024-04-27 03:15:53,942 | INFO     | cat /etc/os-release:
[2024-04-27 05:16:12] NAME="CentOS Linux"
[2024-04-27 05:16:12] VERSION="7 (Core)"
[2024-04-27 05:16:12] ID="centos"
[2024-04-27 05:16:12] ID_LIKE="rhel fedora"
[2024-04-27 05:16:12] VERSION_ID="7"
[2024-04-27 05:16:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 05:16:12] ANSI_COLOR="0;31"
[2024-04-27 05:16:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 05:16:12] HOME_URL="https://www.centos.org/"
[2024-04-27 05:16:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 05:16:13] 
[2024-04-27 05:16:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 05:16:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 05:16:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 05:16:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 05:16:13] 
[2024-04-27 05:16:13] 2024-04-27 03:15:53,942 | INFO     | *************************************
[2024-04-27 05:16:13] 2024-04-27 03:15:54,447 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2024-04-27 05:16:13] 2024-04-27 03:15:54,469 | INFO     | sufficient remaining disk space (3044227940352 B)
[2024-04-27 05:16:13] 2024-04-27 03:15:54,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 05:16:13] 2024-04-27 03:15:54,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 05:16:13] 2024-04-27 03:15:54,470 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 05:16:13] 2024-04-27 03:15:54,470 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 05:16:13] 2024-04-27 03:15:54,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 05:16:13] 2024-04-27 03:15:54,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 05:16:13] 2024-04-27 03:15:54,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 05:16:13] 2024-04-27 03:15:54,940 | INFO     | all payload control threads have been joined
[2024-04-27 05:16:13] 2024-04-27 03:15:54,943 | INFO     | all job control threads have been joined
[2024-04-27 05:16:13] 2024-04-27 03:15:55,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 05:16:13] 2024-04-27 03:15:55,194 | INFO     | aborting loop
[2024-04-27 05:16:13] 2024-04-27 03:15:55,234 | INFO     | all data control threads have been joined
[2024-04-27 05:16:13] 2024-04-27 03:15:55,475 | INFO     | [job] retrieve thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:55,635 | INFO     | [payload] validate_post thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:55,675 | INFO     | [job] validate thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:55,698 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:55,826 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:55,865 | INFO     | [data] copytool_in thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:55,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 05:16:13] 2024-04-27 03:15:55,917 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:55,944 | INFO     | [payload] control thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:55,948 | INFO     | [job] control thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:56,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 05:16:13] 2024-04-27 03:15:56,198 | INFO     | [job] job monitor thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:56,237 | INFO     | [data] control thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:56,582 | INFO     | [payload] failed_post thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:57,198 | INFO     | [job] queue monitor thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:57,912 | INFO     | [data] copytool_out thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:15:58,769 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:16:04,522 | INFO     | job.realtimelogging is not enabled
[2024-04-27 05:16:13] 2024-04-27 03:16:05,528 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 05:16:13] 2024-04-27 03:16:06,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47564402168896)>', '<ExcThread(monitor, started 47564573402880)>']
[2024-04-27 05:16:13] 2024-04-27 03:16:07,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 05:16:13] 2024-04-27 03:16:07,532 | INFO     | [monitor] control thread has ended
[2024-04-27 05:16:13] 2024-04-27 03:16:11,994 | INFO     | all workflow threads have been joined
[2024-04-27 05:16:13] 2024-04-27 03:16:11,994 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 05:16:13] 2024-04-27 03:16:11,994 | INFO     | traces error code: 0
[2024-04-27 05:16:13] 2024-04-27 03:16:11,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 05:16:13] 2024-04-27 03:16:12,072 [wrapper] ==== pilot stdout END ====
[2024-04-27 05:16:13] 2024-04-27 03:16:12,075 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 05:16:13] 2024-04-27 03:16:12,077 [wrapper] pilotpid: 2299877
[2024-04-27 05:16:13] 2024-04-27 03:16:12,079 [wrapper] Pilot exit status: 0
[2024-04-27 05:16:13] 2024-04-27 03:16:12,098 [wrapper] pandaids: 6185360806
[2024-04-27 05:16:13] 2024-04-27 03:16:12,221 [wrapper] cleanup: SIGTERM to supervisor_pilot 3371022 2299878
[2024-04-27 05:16:13] 2024-04-27 03:16:12,224 [wrapper] Test setup, not cleaning
[2024-04-27 05:16:13] 2024-04-27 03:16:12,226 [wrapper] ==== wrapper stdout END ====
[2024-04-27 05:16:13] 2024-04-27 03:16:12,229 [wrapper] ==== wrapper stderr END ====
[2024-04-27 05:16:13] 2024-04-27 03:16:12,234 [wrapper] apfmon messages muted
[2024-04-27 05:16:13]  *** Error codes and diagnostics ***
[2024-04-27 05:16:13]     "exeErrorCode": 0,
[2024-04-27 05:16:13]     "exeErrorDiag": "",
[2024-04-27 05:16:13]     "pilotErrorCode": 0,
[2024-04-27 05:16:13]     "pilotErrorDiag": "",
[2024-04-27 05:16:13]  *** Listing of results directory ***
[2024-04-27 05:16:13] total 825568
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc      6720 Apr 25 01:12 queuedata.json
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc    462745 Apr 25 01:12 pilot3.tar.gz
[2024-04-27 05:16:13] -rwx------ 1 boinc boinc     32211 Apr 25 01:12 runpilot2-wrapper.sh
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc       100 Apr 27 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 05:16:13] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 01:41 run_atlas
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc       105 Apr 27 01:41 job.xml
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc      6645 Apr 27 01:41 init_data.xml
[2024-04-27 05:16:13] -rw-r--r-- 2 boinc boinc 569449573 Apr 27 01:41 EVNT.38221969._000006.pool.root.1
[2024-04-27 05:16:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 01:41 start_atlas.sh
[2024-04-27 05:16:13] drwxrwx--x 2 boinc boinc      4096 Apr 27 01:41 shared
[2024-04-27 05:16:13] -rw-r--r-- 2 boinc boinc    474786 Apr 27 01:41 input.tar.gz
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc         0 Apr 27 01:41 boinc_lockfile
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc      2597 Apr 27 01:41 pandaJob.out
[2024-04-27 05:16:13] -rw------- 1 boinc boinc       424 Apr 27 01:41 setup.sh.local
[2024-04-27 05:16:13] -rw------- 1 boinc boinc    997383 Apr 27 01:42 agis_schedconf.cvmfs.json
[2024-04-27 05:16:13] -rw------- 1 boinc boinc   1315307 Apr 27 01:42 cric_ddmendpoints.json
[2024-04-27 05:16:13] drwx------ 4 boinc boinc      4096 Apr 27 01:42 pilot3
[2024-04-27 05:16:13] -rw------- 1 boinc boinc 269410138 Apr 27 05:15 HITS.38221971._000132.pool.root.1
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc       532 Apr 27 05:15 boinc_task_state.xml
[2024-04-27 05:16:13] -rw------- 1 boinc boinc        95 Apr 27 05:15 pilot_heartbeat.json
[2024-04-27 05:16:13] -rw------- 1 boinc boinc      1046 Apr 27 05:15 memory_monitor_summary.json
[2024-04-27 05:16:13] -rw------- 1 boinc boinc         0 Apr 27 05:15 agis_ddmendpoints.agis.ALL.json
[2024-04-27 05:16:13] -rw------- 1 boinc boinc    313348 Apr 27 05:15 log.38221971._000132.job.log.tgz.1
[2024-04-27 05:16:13] -rw------- 1 boinc boinc      7692 Apr 27 05:15 heartbeat.json
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc      8192 Apr 27 05:16 boinc_mmap_file
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc        28 Apr 27 05:16 wrapper_checkpoint.txt
[2024-04-27 05:16:13] -rw------- 1 boinc boinc      4418 Apr 27 05:16 pilotlog.txt
[2024-04-27 05:16:13] -rw------- 1 boinc boinc   1206468 Apr 27 05:16 log.38221971._000132.job.log.1
[2024-04-27 05:16:13] -rw------- 1 boinc boinc       357 Apr 27 05:16 output.list
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc       620 Apr 27 05:16 runtime_log
[2024-04-27 05:16:13] -rw------- 1 boinc boinc   1536000 Apr 27 05:16 result.tar.gz
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc     11429 Apr 27 05:16 runtime_log.err
[2024-04-27 05:16:13] -rw------- 1 boinc boinc       658 Apr 27 05:16 lU6LDmGy0J5nsSi4apGgGQJmABFKDmABFKDmRLXKDmhfRKDm0uN8hn.diag
[2024-04-27 05:16:13] -rw-r--r-- 1 boinc boinc     21434 Apr 27 05:16 stderr.txt
[2024-04-27 05:16:13] HITS file was successfully produced:
[2024-04-27 05:16:13] -rw------- 1 boinc boinc 269410138 Apr 27 05:15 shared/HITS.pool.root.1
[2024-04-27 05:16:13]  *** Contents of shared directory: ***
[2024-04-27 05:16:13] total 821192
[2024-04-27 05:16:13] -rw-r--r-- 2 boinc boinc 569449573 Apr 27 01:41 ATLAS.root_0
[2024-04-27 05:16:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 01:41 start_atlas.sh
[2024-04-27 05:16:13] -rw-r--r-- 2 boinc boinc    474786 Apr 27 01:41 input.tar.gz
[2024-04-27 05:16:13] -rw------- 1 boinc boinc 269410138 Apr 27 05:15 HITS.pool.root.1
[2024-04-27 05:16:13] -rw------- 1 boinc boinc   1536000 Apr 27 05:16 result.tar.gz
05:16:14 (2295264): run_atlas exited; CPU time 48100.303018
05:16:14 (2295264): called boinc_finish(0)

</stderr_txt>
]]>

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