Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:28 (224845): wrapper (7.7.26015): starting
16:37:28 (224845): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 16:37:28] Arguments: --nthreads 4
[2024-04-26 16:37:28] Threads: 4
[2024-04-26 16:37:28] Checking for CVMFS
[2024-04-26 16:37:28] No cvmfs_config command found, will try listing directly
[2024-04-26 16:37:28] CVMFS is ok
[2024-04-26 16:37:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 16:37:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 16:37:28] Further information can be found at the LHC@home message board.
[2024-04-26 16:37:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 16:37:28] Checking for apptainer binary...
[2024-04-26 16:37:28] which: no apptainer in ((null))
[2024-04-26 16:37:28] apptainer is not installed, using version from CVMFS
[2024-04-26 16:37:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 16:37:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-04-26 16:37:29] apptainer works
[2024-04-26 16:37:29] Set ATHENA_PROC_NUMBER=4
[2024-04-26 16:37:29] Set ATHENA_CORE_NUMBER=4
[2024-04-26 16:37:29] Starting ATLAS job with PandaID=6185303579
[2024-04-26 16:37:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 19:56:26]  *** The last 200 lines of the pilot log: ***
[2024-04-26 19:56:26]  direct_access_lan=False
[2024-04-26 19:56:26]  direct_access_wan=False
[2024-04-26 19:56:26]  domain=
[2024-04-26 19:56:26]  filesize=313659
[2024-04-26 19:56:26]  filetype=log
[2024-04-26 19:56:26]  guid=f059252f-5246-4cd1-b3fa-4cacdd275b6a
[2024-04-26 19:56:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 19:56:26]  is_tar=False
[2024-04-26 19:56:26]  lfn=log.38204359._005702.job.log.tgz.1
[2024-04-26 19:56:26]  mtime=0
[2024-04-26 19:56:26]  protocol_id=None
[2024-04-26 19:56:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 19:56:26]  replicas=None
[2024-04-26 19:56:26]  scope=mc23_13p6TeV
[2024-04-26 19:56:26]  status=None
[2024-04-26 19:56:26]  status_code=0
[2024-04-26 19:56:26]  storage_token=
[2024-04-26 19:56:26]  surl=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6185303579/log.38204359._005702.job.log.tgz.1
[2024-04-26 19:56:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/02/log.38204359._005702.job.log.tgz.1
[2024-04-26 19:56:26]  workdir=None
[2024-04-26 19:56:26] ]
[2024-04-26 19:56:26] 2024-04-26 17:56:00,827 | INFO     | transferring file log.38204359._005702.job.log.tgz.1 from /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6185303579/log.38204359._005702.job.log.tgz.1 to /scratch/b
[2024-04-26 19:56:26] 2024-04-26 17:56:00,827 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6185303579/log.38204359._005702.job.log.tgz.1 /scratch/boinc/var/slot32/slots/0/lo
[2024-04-26 19:56:26] 2024-04-26 17:56:00,838 | INFO     | adding to output.list: log.38204359._005702.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/02/log.38204359._005702.job.log.tg
[2024-04-26 19:56:26] 2024-04-26 17:56:00,839 | INFO     | summary of transferred files:
[2024-04-26 19:56:26] 2024-04-26 17:56:00,839 | INFO     |  -- lfn=log.38204359._005702.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 19:56:26] 2024-04-26 17:56:00,839 | INFO     | stage-out finished correctly
[2024-04-26 19:56:26] 2024-04-26 17:56:01,000 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 19:56:26] 2024-04-26 17:56:01,061 | INFO     | job 6185303579 has state=finished
[2024-04-26 19:56:26] 2024-04-26 17:56:01,061 | INFO     | preparing for final server update for job 6185303579 in state='finished'
[2024-04-26 19:56:26] 2024-04-26 17:56:01,062 | INFO     | this job has now completed (state=finished)
[2024-04-26 19:56:26] 2024-04-26 17:56:01,062 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 19:56:26] 2024-04-26 17:56:01,062 | INFO     | job 6185303579 has finished - writing final server update
[2024-04-26 19:56:26] 2024-04-26 17:56:01,062 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3015850/.job.ad'
[2024-04-26 19:56:26] 2024-04-26 17:56:01,062 | INFO     | total number of processed events: 400 (read)
[2024-04-26 19:56:26] 2024-04-26 17:56:01,064 | INFO     | executing command: lscpu
[2024-04-26 19:56:26] 2024-04-26 17:56:01,087 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-26 19:56:26] 2024-04-26 17:56:01,087 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 19:56:26] 2024-04-26 17:56:01,112 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 19:56:26] 2024-04-26 17:56:02,100 | INFO     | monitor loop #914: job 0:6185303579 is in state 'finished'
[2024-04-26 19:56:26] 2024-04-26 17:56:02,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 19:56:26] 2024-04-26 17:56:04,603 | INFO     | monitor loop #915: job 0:6185303579 is in state 'finished'
[2024-04-26 19:56:26] 2024-04-26 17:56:04,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 19:56:26] 2024-04-26 17:56:05,968 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 19:56:26] 2024-04-26 17:56:05,968 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6185303579/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 19:56:26] 2024-04-26 17:56:05,969 | INFO     | extracted standard info from prmon json
[2024-04-26 19:56:26] 2024-04-26 17:56:05,969 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 19:56:26] 2024-04-26 17:56:05,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 19:56:26] 2024-04-26 17:56:05,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 19:56:26] 2024-04-26 17:56:05,972 | INFO     | fitting pss+swap vs Time
[2024-04-26 19:56:26] 2024-04-26 17:56:05,974 | INFO     | current chi2=3.775064344761858 (change=0.010116353325474023 %)
[2024-04-26 19:56:26] 2024-04-26 17:56:05,974 | INFO     | right removable region: 189
[2024-04-26 19:56:26] 2024-04-26 17:56:05,975 | INFO     | current chi2=1.3969788331007584 (change=62.99831255262388 %)
[2024-04-26 19:56:26] 2024-04-26 17:56:05,976 | INFO     | current chi2=0.07578726083089103 (change=94.57491702557353 %)
[2024-04-26 19:56:26] 2024-04-26 17:56:05,976 | INFO     | current chi2=0.005944123652082504 (change=92.15683007023303 %)
[2024-04-26 19:56:26] 2024-04-26 17:56:05,977 | INFO     | current chi2=0.004983969580701121 (change=16.15299626287209 %)
[2024-04-26 19:56:26] 2024-04-26 17:56:05,977 | INFO     | left removable region: 40
[2024-04-26 19:56:26] 2024-04-26 17:56:05,978 | INFO     | current memory leak: 2.00 B/s (using 149 data points, chi2=0.00)
[2024-04-26 19:56:26] 2024-04-26 17:56:05,978 | INFO     | ..............................
[2024-04-26 19:56:26] 2024-04-26 17:56:05,978 | INFO     | . Timing measurements:
[2024-04-26 19:56:26] 2024-04-26 17:56:05,978 | INFO     | . get job = 0 s
[2024-04-26 19:56:26] 2024-04-26 17:56:05,979 | INFO     | . initial setup = 1 s
[2024-04-26 19:56:26] 2024-04-26 17:56:05,979 | INFO     | . payload setup = 4 s
[2024-04-26 19:56:26] 2024-04-26 17:56:05,979 | INFO     | . stage-in = 0 s
[2024-04-26 19:56:26] 2024-04-26 17:56:05,979 | INFO     | . payload execution = 11872 s
[2024-04-26 19:56:26] 2024-04-26 17:56:05,979 | INFO     | . stage-out = 0 s
[2024-04-26 19:56:26] 2024-04-26 17:56:05,979 | INFO     | . log creation = 0 s
[2024-04-26 19:56:26] 2024-04-26 17:56:05,979 | INFO     | ..............................
[2024-04-26 19:56:26] 2024-04-26 17:56:06,036 | INFO     | 
[2024-04-26 19:56:26] 2024-04-26 17:56:06,036 | INFO     | job summary report
[2024-04-26 19:56:26] 2024-04-26 17:56:06,036 | INFO     | --------------------------------------------------
[2024-04-26 19:56:26] 2024-04-26 17:56:06,037 | INFO     | PanDA job id: 6185303579
[2024-04-26 19:56:26] 2024-04-26 17:56:06,037 | INFO     | task id: 38204359
[2024-04-26 19:56:26] 2024-04-26 17:56:06,037 | INFO     | errors: (none)
[2024-04-26 19:56:26] 2024-04-26 17:56:06,037 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 19:56:26] 2024-04-26 17:56:06,037 | INFO     | pilot state: finished 
[2024-04-26 19:56:26] 2024-04-26 17:56:06,037 | INFO     | transexitcode: 0
[2024-04-26 19:56:26] 2024-04-26 17:56:06,037 | INFO     | exeerrorcode: 0
[2024-04-26 19:56:26] 2024-04-26 17:56:06,038 | INFO     | exeerrordiag: 
[2024-04-26 19:56:26] 2024-04-26 17:56:06,038 | INFO     | exitcode: 0
[2024-04-26 19:56:26] 2024-04-26 17:56:06,038 | INFO     | exitmsg: OK
[2024-04-26 19:56:26] 2024-04-26 17:56:06,038 | INFO     | cpuconsumptiontime: 44405 s
[2024-04-26 19:56:26] 2024-04-26 17:56:06,038 | INFO     | nevents: 400
[2024-04-26 19:56:26] 2024-04-26 17:56:06,038 | INFO     | neventsw: 0
[2024-04-26 19:56:26] 2024-04-26 17:56:06,038 | INFO     | pid: 237300
[2024-04-26 19:56:26] 2024-04-26 17:56:06,038 | INFO     | pgrp: 237300
[2024-04-26 19:56:26] 2024-04-26 17:56:06,039 | INFO     | corecount: 4
[2024-04-26 19:56:26] 2024-04-26 17:56:06,039 | INFO     | event service: False
[2024-04-26 19:56:26] 2024-04-26 17:56:06,039 | INFO     | sizes: {0: 2375564, 1: 2375763, 8: 2375969, 12: 2375997, 11881: 2405606, 11882: 2414772, 11887: 2414886}
[2024-04-26 19:56:26] 2024-04-26 17:56:06,039 | INFO     | --------------------------------------------------
[2024-04-26 19:56:26] 2024-04-26 17:56:06,039 | INFO     | 
[2024-04-26 19:56:26] 2024-04-26 17:56:06,039 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-04-26 19:56:26] 2024-04-26 17:56:06,056 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | job 6185303579 has completed (purged errors)
[2024-04-26 19:56:26] 2024-04-26 17:56:06,058 | INFO     | overall cleanup function is called
[2024-04-26 19:56:26] 2024-04-26 17:56:07,064 | INFO     | --- collectZombieJob: --- 10, [237300]
[2024-04-26 19:56:26] 2024-04-26 17:56:07,065 | INFO     | zombie collector waiting for pid 237300
[2024-04-26 19:56:26] 2024-04-26 17:56:07,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 19:56:26] 2024-04-26 17:56:08,069 | INFO     | collected zombie processes
[2024-04-26 19:56:26] 2024-04-26 17:56:08,070 | INFO     | will now attempt to kill all subprocesses of pid=237300
[2024-04-26 19:56:26] 2024-04-26 17:56:08,168 | INFO     | process IDs to be killed: [237300] (in reverse order)
[2024-04-26 19:56:26] 2024-04-26 17:56:08,228 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 19:56:26] 2024-04-26 17:56:08,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 19:56:26] 2024-04-26 17:56:08,233 | INFO     | did not find any defunct processes belonging to 237300
[2024-04-26 19:56:26] 2024-04-26 17:56:08,236 | INFO     | did not find any defunct processes belonging to 237300
[2024-04-26 19:56:26] 2024-04-26 17:56:08,236 | INFO     | ready for new job
[2024-04-26 19:56:26] 2024-04-26 17:56:08,236 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 19:56:26] 2024-04-26 17:56:08,238 | INFO     | *************************************
[2024-04-26 19:56:26] 2024-04-26 17:56:08,238 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 19:56:26] 2024-04-26 17:56:08,238 | INFO     | *************************************
[2024-04-26 19:56:26] 2024-04-26 17:56:08,238 | INFO     | 
[2024-04-26 19:56:26] 2024-04-26 17:56:08,239 | INFO     | architecture information:
[2024-04-26 19:56:26] 2024-04-26 17:56:08,239 | INFO     | executing command: cat /etc/os-release
[2024-04-26 19:56:26] 2024-04-26 17:56:08,249 | INFO     | cat /etc/os-release:
[2024-04-26 19:56:26] NAME="CentOS Linux"
[2024-04-26 19:56:26] VERSION="7 (Core)"
[2024-04-26 19:56:26] ID="centos"
[2024-04-26 19:56:26] ID_LIKE="rhel fedora"
[2024-04-26 19:56:26] VERSION_ID="7"
[2024-04-26 19:56:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 19:56:26] ANSI_COLOR="0;31"
[2024-04-26 19:56:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 19:56:26] HOME_URL="https://www.centos.org/"
[2024-04-26 19:56:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 19:56:26] 
[2024-04-26 19:56:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 19:56:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 19:56:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 19:56:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 19:56:26] 
[2024-04-26 19:56:26] 2024-04-26 17:56:08,250 | INFO     | *************************************
[2024-04-26 19:56:26] 2024-04-26 17:56:08,752 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-04-26 19:56:26] 2024-04-26 17:56:08,768 | INFO     | sufficient remaining disk space (1638868713472 B)
[2024-04-26 19:56:26] 2024-04-26 17:56:08,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 19:56:26] 2024-04-26 17:56:08,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 19:56:26] 2024-04-26 17:56:08,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 19:56:26] 2024-04-26 17:56:08,769 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 19:56:26] 2024-04-26 17:56:08,769 | INFO     | aborting loop
[2024-04-26 19:56:26] 2024-04-26 17:56:08,770 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 19:56:26] 2024-04-26 17:56:08,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 19:56:26] 2024-04-26 17:56:08,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 19:56:26] 2024-04-26 17:56:08,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 19:56:26] 2024-04-26 17:56:09,390 | INFO     | all data control threads have been joined
[2024-04-26 19:56:26] 2024-04-26 17:56:09,773 | INFO     | [job] retrieve thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:09,774 | INFO     | [job] job monitor thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:09,951 | INFO     | all payload control threads have been joined
[2024-04-26 19:56:26] 2024-04-26 17:56:10,039 | INFO     | [payload] validate_post thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:10,335 | INFO     | all job control threads have been joined
[2024-04-26 19:56:26] 2024-04-26 17:56:10,395 | INFO     | [data] control thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:10,466 | INFO     | [job] validate thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:10,876 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:10,911 | INFO     | [data] copytool_out thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:10,952 | INFO     | [payload] control thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:11,043 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:11,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 19:56:26] 2024-04-26 17:56:11,068 | INFO     | [data] copytool_in thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:11,180 | INFO     | [payload] failed_post thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:11,239 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:11,340 | INFO     | [job] control thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:11,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 19:56:26] 2024-04-26 17:56:12,050 | INFO     | [job] queue monitor thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:15,573 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:19,318 | INFO     | job.realtimelogging is not enabled
[2024-04-26 19:56:26] 2024-04-26 17:56:20,323 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 19:56:26] 2024-04-26 17:56:21,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47199522776128)>', '<ExcThread(monitor, started 47199767537408)>']
[2024-04-26 19:56:26] 2024-04-26 17:56:21,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 19:56:26] 2024-04-26 17:56:21,834 | INFO     | [monitor] control thread has ended
[2024-04-26 19:56:26] 2024-04-26 17:56:26,177 | INFO     | all workflow threads have been joined
[2024-04-26 19:56:26] 2024-04-26 17:56:26,178 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 19:56:26] 2024-04-26 17:56:26,178 | INFO     | traces error code: 0
[2024-04-26 19:56:26] 2024-04-26 17:56:26,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 19:56:26] 2024-04-26 17:56:26,245 [wrapper] ==== pilot stdout END ====
[2024-04-26 19:56:26] 2024-04-26 17:56:26,248 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 19:56:26] 2024-04-26 17:56:26,249 [wrapper] pilotpid: 230373
[2024-04-26 19:56:26] 2024-04-26 17:56:26,251 [wrapper] Pilot exit status: 0
[2024-04-26 19:56:26] 2024-04-26 17:56:26,263 [wrapper] pandaids: 6185303579
[2024-04-26 19:56:26] 2024-04-26 17:56:26,311 [wrapper] cleanup: SIGTERM to supervisor_pilot  597464 230374
[2024-04-26 19:56:26] 2024-04-26 17:56:26,313 [wrapper] Test setup, not cleaning
[2024-04-26 19:56:26] 2024-04-26 17:56:26,314 [wrapper] ==== wrapper stdout END ====
[2024-04-26 19:56:26] 2024-04-26 17:56:26,316 [wrapper] ==== wrapper stderr END ====
[2024-04-26 19:56:26] 2024-04-26 17:56:26,319 [wrapper] apfmon messages muted
[2024-04-26 19:56:26]  *** Error codes and diagnostics ***
[2024-04-26 19:56:26]     "exeErrorCode": 0,
[2024-04-26 19:56:26]     "exeErrorDiag": "",
[2024-04-26 19:56:26]     "pilotErrorCode": 0,
[2024-04-26 19:56:26]     "pilotErrorDiag": "",
[2024-04-26 19:56:26]  *** Listing of results directory ***
[2024-04-26 19:56:26] total 686308
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc    462745 Apr 24 20:55 pilot3.tar.gz
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc      6720 Apr 24 20:58 queuedata.json
[2024-04-26 19:56:26] -rwx------ 1 boinc boinc     32211 Apr 24 20:58 runpilot2-wrapper.sh
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc       100 Apr 26 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 19:56:26] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 16:37 run_atlas
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc       105 Apr 26 16:37 job.xml
[2024-04-26 19:56:26] -rw-r--r-- 2 boinc boinc 515601845 Apr 26 16:37 EVNT.38204357._000034.pool.root.1
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc      6457 Apr 26 16:37 init_data.xml
[2024-04-26 19:56:26] drwxrwx--x 2 boinc boinc      4096 Apr 26 16:37 shared
[2024-04-26 19:56:26] -rw-r--r-- 2 boinc boinc    474811 Apr 26 16:37 input.tar.gz
[2024-04-26 19:56:26] -rw-r--r-- 2 boinc boinc     17537 Apr 26 16:37 start_atlas.sh
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc         0 Apr 26 16:37 boinc_lockfile
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc      2621 Apr 26 16:37 pandaJob.out
[2024-04-26 19:56:26] -rw------- 1 boinc boinc       424 Apr 26 16:37 setup.sh.local
[2024-04-26 19:56:26] -rw------- 1 boinc boinc    997829 Apr 26 16:37 agis_schedconf.cvmfs.json
[2024-04-26 19:56:26] -rw------- 1 boinc boinc   1315307 Apr 26 16:37 cric_ddmendpoints.json
[2024-04-26 19:56:26] drwx------ 4 boinc boinc      4096 Apr 26 16:37 pilot3
[2024-04-26 19:56:26] -rw------- 1 boinc boinc        95 Apr 26 19:55 pilot_heartbeat.json
[2024-04-26 19:56:26] -rw------- 1 boinc boinc 180801158 Apr 26 19:55 HITS.38204359._005702.pool.root.1
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc       532 Apr 26 19:55 boinc_task_state.xml
[2024-04-26 19:56:26] -rw------- 1 boinc boinc      1048 Apr 26 19:55 memory_monitor_summary.json
[2024-04-26 19:56:26] -rw------- 1 boinc boinc         0 Apr 26 19:56 agis_ddmendpoints.agis.ALL.json
[2024-04-26 19:56:26] -rw------- 1 boinc boinc    313659 Apr 26 19:56 log.38204359._005702.job.log.tgz.1
[2024-04-26 19:56:26] -rw------- 1 boinc boinc      7733 Apr 26 19:56 heartbeat.json
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc        28 Apr 26 19:56 wrapper_checkpoint.txt
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc      8192 Apr 26 19:56 boinc_mmap_file
[2024-04-26 19:56:26] -rw------- 1 boinc boinc      4417 Apr 26 19:56 pilotlog.txt
[2024-04-26 19:56:26] -rw------- 1 boinc boinc   1128071 Apr 26 19:56 log.38204359._005702.job.log.1
[2024-04-26 19:56:26] -rw------- 1 boinc boinc       357 Apr 26 19:56 output.list
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc       620 Apr 26 19:56 runtime_log
[2024-04-26 19:56:26] -rw------- 1 boinc boinc   1464320 Apr 26 19:56 result.tar.gz
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc     11410 Apr 26 19:56 runtime_log.err
[2024-04-26 19:56:26] -rw------- 1 boinc boinc       658 Apr 26 19:56 kUPMDm7zwJ5np2BDcpmwOghnABFKDmABFKDmJjxZDmGrHKDmysBxan.diag
[2024-04-26 19:56:26] -rw-r--r-- 1 boinc boinc     21040 Apr 26 19:56 stderr.txt
[2024-04-26 19:56:27] HITS file was successfully produced:
[2024-04-26 19:56:27] -rw------- 1 boinc boinc 180801158 Apr 26 19:55 shared/HITS.pool.root.1
[2024-04-26 19:56:27]  *** Contents of shared directory: ***
[2024-04-26 19:56:27] total 682008
[2024-04-26 19:56:27] -rw-r--r-- 2 boinc boinc 515601845 Apr 26 16:37 ATLAS.root_0
[2024-04-26 19:56:27] -rw-r--r-- 2 boinc boinc    474811 Apr 26 16:37 input.tar.gz
[2024-04-26 19:56:27] -rw-r--r-- 2 boinc boinc     17537 Apr 26 16:37 start_atlas.sh
[2024-04-26 19:56:27] -rw------- 1 boinc boinc 180801158 Apr 26 19:55 HITS.pool.root.1
[2024-04-26 19:56:27] -rw------- 1 boinc boinc   1464320 Apr 26 19:56 result.tar.gz
19:56:28 (224845): run_atlas exited; CPU time 44205.814749
19:56:28 (224845): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN