Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:52:40 (1086596): wrapper (7.7.26015): starting
19:52:40 (1086596): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 19:52:40] Arguments: --nthreads 4
[2024-04-26 19:52:40] Threads: 4
[2024-04-26 19:52:40] Checking for CVMFS
[2024-04-26 19:52:40] No cvmfs_config command found, will try listing directly
[2024-04-26 19:52:40] CVMFS is ok
[2024-04-26 19:52:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 19:52:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 19:52:40] Further information can be found at the LHC@home message board.
[2024-04-26 19:52:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 19:52:40] Checking for apptainer binary...
[2024-04-26 19:52:40] which: no apptainer in ((null))
[2024-04-26 19:52:40] apptainer is not installed, using version from CVMFS
[2024-04-26 19:52:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 19:52:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-04-26 19:52:41] apptainer works
[2024-04-26 19:52:41] Set ATHENA_PROC_NUMBER=4
[2024-04-26 19:52:41] Set ATHENA_CORE_NUMBER=4
[2024-04-26 19:52:41] Starting ATLAS job with PandaID=6185274395
[2024-04-26 19:52:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 23:59:14]  *** The last 200 lines of the pilot log: ***
[2024-04-26 23:59:14]  domain=
[2024-04-26 23:59:14]  filesize=332272
[2024-04-26 23:59:14]  filetype=log
[2024-04-26 23:59:14]  guid=e226a6df-a0b3-4254-90c3-1ce48fec36a9
[2024-04-26 23:59:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 23:59:14]  is_tar=False
[2024-04-26 23:59:14]  lfn=log.38207227._002398.job.log.tgz.1
[2024-04-26 23:59:14]  mtime=0
[2024-04-26 23:59:14]  protocol_id=None
[2024-04-26 23:59:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 23:59:14]  replicas=None
[2024-04-26 23:59:14]  scope=mc23_13p6TeV
[2024-04-26 23:59:14]  status=None
[2024-04-26 23:59:14]  status_code=0
[2024-04-26 23:59:14]  storage_token=
[2024-04-26 23:59:14]  surl=/scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6185274395/log.38207227._002398.job.log.tgz.1
[2024-04-26 23:59:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/90/log.38207227._002398.job.log.tgz.1
[2024-04-26 23:59:14]  workdir=None
[2024-04-26 23:59:14] ]
[2024-04-26 23:59:14] 2024-04-26 21:58:44,607 | INFO     | transferring file log.38207227._002398.job.log.tgz.1 from /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6185274395/log.38207227._002398.job.log.tgz.1 to /scratch/b
[2024-04-26 23:59:14] 2024-04-26 21:58:44,607 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6185274395/log.38207227._002398.job.log.tgz.1 /scratch/boinc/var/slot36/slots/0/lo
[2024-04-26 23:59:14] 2024-04-26 21:58:44,637 | INFO     | adding to output.list: log.38207227._002398.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/90/log.38207227._002398.job.log.tg
[2024-04-26 23:59:14] 2024-04-26 21:58:44,638 | INFO     | summary of transferred files:
[2024-04-26 23:59:14] 2024-04-26 21:58:44,638 | INFO     |  -- lfn=log.38207227._002398.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 23:59:14] 2024-04-26 21:58:44,638 | INFO     | stage-out finished correctly
[2024-04-26 23:59:14] 2024-04-26 21:58:45,026 | INFO     | monitor loop #1121: job 0:6185274395 is in state 'finished'
[2024-04-26 23:59:14] 2024-04-26 21:58:45,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 23:59:14] 2024-04-26 21:58:46,229 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 23:59:14] 2024-04-26 21:58:46,642 | INFO     | job 6185274395 has state=finished
[2024-04-26 23:59:14] 2024-04-26 21:58:46,642 | INFO     | preparing for final server update for job 6185274395 in state='finished'
[2024-04-26 23:59:14] 2024-04-26 21:58:46,643 | INFO     | this job has now completed (state=finished)
[2024-04-26 23:59:14] 2024-04-26 21:58:46,643 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 23:59:14] 2024-04-26 21:58:46,643 | INFO     | job 6185274395 has finished - writing final server update
[2024-04-26 23:59:14] 2024-04-26 21:58:46,644 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2758084/.job.ad'
[2024-04-26 23:59:14] 2024-04-26 21:58:46,644 | INFO     | total number of processed events: 400 (read)
[2024-04-26 23:59:14] 2024-04-26 21:58:46,647 | INFO     | executing command: lscpu
[2024-04-26 23:59:14] 2024-04-26 21:58:46,687 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-26 23:59:14] 2024-04-26 21:58:46,687 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 23:59:14] 2024-04-26 21:58:46,723 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 23:59:14] 2024-04-26 21:58:47,530 | INFO     | monitor loop #1122: job 0:6185274395 is in state 'finished'
[2024-04-26 23:59:14] 2024-04-26 21:58:47,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 23:59:14] 2024-04-26 21:58:50,033 | INFO     | monitor loop #1123: job 0:6185274395 is in state 'finished'
[2024-04-26 23:59:14] 2024-04-26 21:58:50,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 23:59:14] 2024-04-26 21:58:52,536 | INFO     | monitor loop #1124: job 0:6185274395 is in state 'finished'
[2024-04-26 23:59:14] 2024-04-26 21:58:52,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,214 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 23:59:14] 2024-04-26 21:58:53,214 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6185274395/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,215 | INFO     | extracted standard info from prmon json
[2024-04-26 23:59:14] 2024-04-26 21:58:53,215 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 23:59:14] 2024-04-26 21:58:53,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 23:59:14] 2024-04-26 21:58:53,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 23:59:14] 2024-04-26 21:58:53,218 | INFO     | fitting pss+swap vs Time
[2024-04-26 23:59:14] 2024-04-26 21:58:53,221 | INFO     | current chi2=3.696376937439363 (change=17.76120632885295 %)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,221 | INFO     | right removable region: 236
[2024-04-26 23:59:14] 2024-04-26 21:58:53,222 | INFO     | current chi2=2.2041468379882083 (change=50.96106806796756 %)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,223 | INFO     | current chi2=0.8876659717432426 (change=59.72745751578683 %)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,224 | INFO     | current chi2=0.8300588850169041 (change=6.489725703150123 %)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,224 | INFO     | left removable region: 30
[2024-04-26 23:59:14] 2024-04-26 21:58:53,225 | INFO     | current memory leak: 2.16 B/s (using 206 data points, chi2=0.00)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,225 | INFO     | ..............................
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | . Timing measurements:
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | . get job = 0 s
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | . initial setup = 1 s
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | . payload setup = 6 s
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | . stage-in = 0 s
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | . payload execution = 14727 s
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | . stage-out = 1 s
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | . log creation = 0 s
[2024-04-26 23:59:14] 2024-04-26 21:58:53,226 | INFO     | ..............................
[2024-04-26 23:59:14] 2024-04-26 21:58:53,347 | INFO     | 
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | job summary report
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | --------------------------------------------------
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | PanDA job id: 6185274395
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | task id: 38207227
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | errors: (none)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | pilot state: finished 
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | transexitcode: 0
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | exeerrorcode: 0
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | exeerrordiag: 
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | exitcode: 0
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | exitmsg: OK
[2024-04-26 23:59:14] 2024-04-26 21:58:53,348 | INFO     | cpuconsumptiontime: 55776 s
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | nevents: 400
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | neventsw: 0
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | pid: 1097833
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | pgrp: 1097833
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | corecount: 4
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | event service: False
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | sizes: {0: 2375660, 4: 2375866, 11: 2375894, 14738: 2406674, 14740: 2415656, 14742: 2415712, 14749: 2416010}
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | --------------------------------------------------
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | 
[2024-04-26 23:59:14] 2024-04-26 21:58:53,349 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-04-26 23:59:14] 2024-04-26 21:58:53,367 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,368 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,368 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,368 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,369 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,370 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,370 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 23:59:14] 2024-04-26 21:58:53,370 | INFO     | job 6185274395 has completed (purged errors)
[2024-04-26 23:59:14] 2024-04-26 21:58:53,371 | INFO     | overall cleanup function is called
[2024-04-26 23:59:14] 2024-04-26 21:58:54,378 | INFO     | --- collectZombieJob: --- 10, [1097833]
[2024-04-26 23:59:14] 2024-04-26 21:58:54,378 | INFO     | zombie collector waiting for pid 1097833
[2024-04-26 23:59:14] 2024-04-26 21:58:54,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 23:59:14] 2024-04-26 21:58:55,383 | INFO     | collected zombie processes
[2024-04-26 23:59:14] 2024-04-26 21:58:55,383 | INFO     | will now attempt to kill all subprocesses of pid=1097833
[2024-04-26 23:59:14] 2024-04-26 21:58:55,514 | INFO     | process IDs to be killed: [1097833] (in reverse order)
[2024-04-26 23:59:14] 2024-04-26 21:58:55,611 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 23:59:14] 2024-04-26 21:58:55,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 23:59:14] 2024-04-26 21:58:55,618 | INFO     | did not find any defunct processes belonging to 1097833
[2024-04-26 23:59:14] 2024-04-26 21:58:55,624 | INFO     | did not find any defunct processes belonging to 1097833
[2024-04-26 23:59:14] 2024-04-26 21:58:55,624 | INFO     | ready for new job
[2024-04-26 23:59:14] 2024-04-26 21:58:55,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 23:59:14] 2024-04-26 21:58:55,626 | INFO     | *************************************
[2024-04-26 23:59:14] 2024-04-26 21:58:55,626 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 23:59:14] 2024-04-26 21:58:55,626 | INFO     | *************************************
[2024-04-26 23:59:14] 2024-04-26 21:58:55,627 | INFO     | 
[2024-04-26 23:59:14] 2024-04-26 21:58:55,629 | INFO     | architecture information:
[2024-04-26 23:59:14] 2024-04-26 21:58:55,629 | INFO     | executing command: cat /etc/os-release
[2024-04-26 23:59:14] 2024-04-26 21:58:55,643 | INFO     | cat /etc/os-release:
[2024-04-26 23:59:14] NAME="CentOS Linux"
[2024-04-26 23:59:14] VERSION="7 (Core)"
[2024-04-26 23:59:14] ID="centos"
[2024-04-26 23:59:14] ID_LIKE="rhel fedora"
[2024-04-26 23:59:14] VERSION_ID="7"
[2024-04-26 23:59:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 23:59:14] ANSI_COLOR="0;31"
[2024-04-26 23:59:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 23:59:14] HOME_URL="https://www.centos.org/"
[2024-04-26 23:59:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 23:59:14] 
[2024-04-26 23:59:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 23:59:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 23:59:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 23:59:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 23:59:14] 
[2024-04-26 23:59:14] 2024-04-26 21:58:55,643 | INFO     | *************************************
[2024-04-26 23:59:14] 2024-04-26 21:58:56,146 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-04-26 23:59:14] 2024-04-26 21:58:56,168 | INFO     | sufficient remaining disk space (1639008174080 B)
[2024-04-26 23:59:14] 2024-04-26 21:58:56,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 23:59:14] 2024-04-26 21:58:56,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 23:59:14] 2024-04-26 21:58:56,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 23:59:14] 2024-04-26 21:58:56,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 23:59:14] 2024-04-26 21:58:56,170 | INFO     | aborting loop
[2024-04-26 23:59:14] 2024-04-26 21:58:56,347 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 23:59:14] 2024-04-26 21:58:56,347 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 23:59:14] 2024-04-26 21:58:56,347 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 23:59:14] 2024-04-26 21:58:56,582 | INFO     | all data control threads have been joined
[2024-04-26 23:59:14] 2024-04-26 21:58:56,802 | INFO     | all payload control threads have been joined
[2024-04-26 23:59:14] 2024-04-26 21:58:56,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 23:59:14] 2024-04-26 21:58:57,174 | INFO     | [job] retrieve thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:57,175 | INFO     | [job] job monitor thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:57,176 | INFO     | [job] validate thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:57,412 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:57,413 | INFO     | all job control threads have been joined
[2024-04-26 23:59:14] 2024-04-26 21:58:57,541 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:57,587 | INFO     | [data] control thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:57,807 | INFO     | [payload] control thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:57,841 | INFO     | [payload] validate_post thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:58,088 | INFO     | [data] copytool_in thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:58,174 | INFO     | [data] copytool_out thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:58,281 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:58,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 23:59:14] 2024-04-26 21:58:58,418 | INFO     | [job] control thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:58,446 | INFO     | [payload] failed_post thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:58:59,298 | INFO     | [job] queue monitor thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:59:00,886 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:59:06,309 | INFO     | job.realtimelogging is not enabled
[2024-04-26 23:59:14] 2024-04-26 21:59:07,314 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 23:59:14] 2024-04-26 21:59:08,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47687803720768)>', '<ExcThread(monitor, started 47688049530624)>']
[2024-04-26 23:59:14] 2024-04-26 21:59:08,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 23:59:14] 2024-04-26 21:59:08,404 | INFO     | [monitor] control thread has ended
[2024-04-26 23:59:14] 2024-04-26 21:59:13,346 | INFO     | all workflow threads have been joined
[2024-04-26 23:59:14] 2024-04-26 21:59:13,346 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 23:59:14] 2024-04-26 21:59:13,346 | INFO     | traces error code: 0
[2024-04-26 23:59:14] 2024-04-26 21:59:13,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 23:59:14] 2024-04-26 21:59:13,430 [wrapper] ==== pilot stdout END ====
[2024-04-26 23:59:14] 2024-04-26 21:59:13,433 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 23:59:14] 2024-04-26 21:59:13,435 [wrapper] pilotpid: 1090971
[2024-04-26 23:59:14] 2024-04-26 21:59:13,437 [wrapper] Pilot exit status: 0
[2024-04-26 23:59:14] 2024-04-26 21:59:13,445 [wrapper] pandaids: 6185274395
[2024-04-26 23:59:14] 2024-04-26 21:59:13,510 [wrapper] cleanup: SIGTERM to supervisor_pilot 1548825 1090972
[2024-04-26 23:59:14] 2024-04-26 21:59:13,513 [wrapper] Test setup, not cleaning
[2024-04-26 23:59:14] 2024-04-26 21:59:13,515 [wrapper] ==== wrapper stdout END ====
[2024-04-26 23:59:14] 2024-04-26 21:59:13,518 [wrapper] ==== wrapper stderr END ====
[2024-04-26 23:59:14] 2024-04-26 21:59:13,525 [wrapper] apfmon messages muted
[2024-04-26 23:59:14]  *** Error codes and diagnostics ***
[2024-04-26 23:59:14]     "exeErrorCode": 0,
[2024-04-26 23:59:14]     "exeErrorDiag": "",
[2024-04-26 23:59:14]     "pilotErrorCode": 0,
[2024-04-26 23:59:14]     "pilotErrorDiag": "",
[2024-04-26 23:59:14]  *** Listing of results directory ***
[2024-04-26 23:59:14] total 698828
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc    462745 Apr 24 19:41 pilot3.tar.gz
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc      6720 Apr 24 19:45 queuedata.json
[2024-04-26 23:59:14] -rwx------ 1 boinc boinc     32211 Apr 24 19:45 runpilot2-wrapper.sh
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc       100 Apr 26 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 23:59:14] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 19:52 run_atlas
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc       105 Apr 26 19:52 job.xml
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc      6457 Apr 26 19:52 init_data.xml
[2024-04-26 23:59:14] -rw-r--r-- 2 boinc boinc 519981911 Apr 26 19:52 EVNT.38207225._000089.pool.root.1
[2024-04-26 23:59:14] -rw-r--r-- 2 boinc boinc     17537 Apr 26 19:52 start_atlas.sh
[2024-04-26 23:59:14] drwxrwx--x 2 boinc boinc      4096 Apr 26 19:52 shared
[2024-04-26 23:59:14] -rw-r--r-- 2 boinc boinc    474800 Apr 26 19:52 input.tar.gz
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc         0 Apr 26 19:52 boinc_lockfile
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc      2608 Apr 26 19:52 pandaJob.out
[2024-04-26 23:59:14] -rw------- 1 boinc boinc       424 Apr 26 19:52 setup.sh.local
[2024-04-26 23:59:14] -rw------- 1 boinc boinc    997399 Apr 26 19:52 agis_schedconf.cvmfs.json
[2024-04-26 23:59:14] -rw------- 1 boinc boinc   1315307 Apr 26 19:52 cric_ddmendpoints.json
[2024-04-26 23:59:14] drwx------ 4 boinc boinc      4096 Apr 26 19:52 pilot3
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc       532 Apr 26 23:58 boinc_task_state.xml
[2024-04-26 23:59:14] -rw------- 1 boinc boinc 188706366 Apr 26 23:58 HITS.38207227._002398.pool.root.1
[2024-04-26 23:59:14] -rw------- 1 boinc boinc        95 Apr 26 23:58 pilot_heartbeat.json
[2024-04-26 23:59:14] -rw------- 1 boinc boinc      1047 Apr 26 23:58 memory_monitor_summary.json
[2024-04-26 23:59:14] -rw------- 1 boinc boinc         0 Apr 26 23:58 agis_ddmendpoints.agis.ALL.json
[2024-04-26 23:59:14] -rw------- 1 boinc boinc    332272 Apr 26 23:58 log.38207227._002398.job.log.tgz.1
[2024-04-26 23:59:14] -rw------- 1 boinc boinc      7733 Apr 26 23:58 heartbeat.json
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc      8192 Apr 26 23:59 boinc_mmap_file
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc        28 Apr 26 23:59 wrapper_checkpoint.txt
[2024-04-26 23:59:14] -rw------- 1 boinc boinc      4294 Apr 26 23:59 pilotlog.txt
[2024-04-26 23:59:14] -rw------- 1 boinc boinc   1376328 Apr 26 23:59 log.38207227._002398.job.log.1
[2024-04-26 23:59:14] -rw------- 1 boinc boinc       357 Apr 26 23:59 output.list
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc       620 Apr 26 23:59 runtime_log
[2024-04-26 23:59:14] -rw------- 1 boinc boinc   1730560 Apr 26 23:59 result.tar.gz
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc     11410 Apr 26 23:59 runtime_log.err
[2024-04-26 23:59:14] -rw------- 1 boinc boinc       658 Apr 26 23:59 7IgLDmqrvJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDmENRKDmeNJNvm.diag
[2024-04-26 23:59:14] -rw-r--r-- 1 boinc boinc     21207 Apr 26 23:59 stderr.txt
[2024-04-26 23:59:14] HITS file was successfully produced:
[2024-04-26 23:59:14] -rw------- 1 boinc boinc 188706366 Apr 26 23:58 shared/HITS.pool.root.1
[2024-04-26 23:59:14]  *** Contents of shared directory: ***
[2024-04-26 23:59:14] total 694264
[2024-04-26 23:59:14] -rw-r--r-- 2 boinc boinc 519981911 Apr 26 19:52 ATLAS.root_0
[2024-04-26 23:59:14] -rw-r--r-- 2 boinc boinc     17537 Apr 26 19:52 start_atlas.sh
[2024-04-26 23:59:14] -rw-r--r-- 2 boinc boinc    474800 Apr 26 19:52 input.tar.gz
[2024-04-26 23:59:14] -rw------- 1 boinc boinc 188706366 Apr 26 23:58 HITS.pool.root.1
[2024-04-26 23:59:14] -rw------- 1 boinc boinc   1730560 Apr 26 23:59 result.tar.gz
23:59:16 (1086596): run_atlas exited; CPU time 55532.808555
23:59:16 (1086596): called boinc_finish(0)

</stderr_txt>
]]>

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