Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
19:57:52 (3136085): wrapper (7.7.26015): starting
19:57:52 (3136085): wrapper: running run_atlas (--nthreads 12)
[2024-04-27 19:57:52] Arguments: --nthreads 12
[2024-04-27 19:57:52] Threads: 12
[2024-04-27 19:57:52] Checking for CVMFS
[2024-04-27 19:57:52] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-27 19:57:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-27 19:57:52] Running cvmfs_config stat atlas.cern.ch
[2024-04-27 19:57:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-27 19:57:52] 2.11.2.0 1768874 571 55400 132115 1 188 2995415 4194305 856 130560 0 1511246 99.363 1284729 14379 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-04-27 19:57:52] CVMFS is ok
[2024-04-27 19:57:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 19:57:52] Checking for apptainer binary...
[2024-04-27 19:57:52] apptainer is not installed, using version from CVMFS
[2024-04-27 19:57:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 19:57:52] Trebeth
[2024-04-27 19:57:52] apptainer works
[2024-04-27 19:57:52] Set ATHENA_PROC_NUMBER=12
[2024-04-27 19:57:52] Set ATHENA_CORE_NUMBER=12
[2024-04-27 19:57:52] Starting ATLAS job with PandaID=6185237142
[2024-04-27 19:57:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 20:46:25]  *** The last 200 lines of the pilot log: ***
[2024-04-27 20:46:25] 2024-04-28 00:46:05,023 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2024-04-27 20:46:25] 2024-04-28 00:46:05,023 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-04-27 20:46:25]  activity=['pl', 'pw', 'w', 'default']
[2024-04-27 20:46:25]  allow_lan=True
[2024-04-27 20:46:25]  allow_wan=False
[2024-04-27 20:46:25]  checkinputsize=True
[2024-04-27 20:46:25]  checksum={'adler32': '5d6625d4'}
[2024-04-27 20:46:25]  dataset=mc23_13p6TeV.603417.PhPy8EG_NNPDF23_A14_ggH125_NNLOPS_tautaul13l7.simul.log.e8559_e8528_s4162_tid38204359_00
[2024-04-27 20:46:25]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 20:46:25]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 20:46:25]  direct_access_lan=False
[2024-04-27 20:46:25]  direct_access_wan=False
[2024-04-27 20:46:25]  domain=
[2024-04-27 20:46:25]  filesize=350443
[2024-04-27 20:46:25]  filetype=log
[2024-04-27 20:46:25]  guid=63a1cd89-5a4b-4998-ade2-66463649fcd2
[2024-04-27 20:46:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 20:46:25]  is_tar=False
[2024-04-27 20:46:25]  lfn=log.38204359._005560.job.log.tgz.1
[2024-04-27 20:46:25]  mtime=0
[2024-04-27 20:46:25]  protocol_id=None
[2024-04-27 20:46:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 20:46:25]  replicas=None
[2024-04-27 20:46:25]  scope=mc23_13p6TeV
[2024-04-27 20:46:25]  status=None
[2024-04-27 20:46:25]  status_code=0
[2024-04-27 20:46:25]  storage_token=
[2024-04-27 20:46:25]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6185237142/log.38204359._005560.job.log.tgz.1
[2024-04-27 20:46:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/c6/log.38204359._005560.job.log.tgz.1
[2024-04-27 20:46:25]  workdir=None
[2024-04-27 20:46:25] ]
[2024-04-27 20:46:25] 2024-04-28 00:46:05,048 | INFO     | transferring file log.38204359._005560.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6185237142/log.38204359._005560.job.log.tgz.1 to /var/lib/boinc
[2024-04-27 20:46:25] 2024-04-28 00:46:05,049 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6185237142/log.38204359._005560.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.382043
[2024-04-27 20:46:25] 2024-04-28 00:46:05,060 | INFO     | adding to output.list: log.38204359._005560.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/c6/log.38204359._005560.job.log.tg
[2024-04-27 20:46:25] 2024-04-28 00:46:05,060 | INFO     | summary of transferred files:
[2024-04-27 20:46:25] 2024-04-28 00:46:05,060 | INFO     |  -- lfn=log.38204359._005560.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 20:46:25] 2024-04-28 00:46:05,061 | INFO     | stage-out finished correctly
[2024-04-27 20:46:25] 2024-04-28 00:46:05,116 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 20:46:25] 2024-04-28 00:46:06,454 | INFO     | job 6185237142 has state=finished
[2024-04-27 20:46:25] 2024-04-28 00:46:06,455 | INFO     | preparing for final server update for job 6185237142 in state='finished'
[2024-04-27 20:46:25] 2024-04-28 00:46:06,455 | INFO     | this job has now completed (state=finished)
[2024-04-27 20:46:25] 2024-04-28 00:46:06,455 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 20:46:25] 2024-04-28 00:46:06,455 | INFO     | job 6185237142 has finished - writing final server update
[2024-04-27 20:46:25] 2024-04-28 00:46:06,456 | INFO     | total number of processed events: 400 (read)
[2024-04-27 20:46:25] 2024-04-28 00:46:06,478 | INFO     | executing command: lscpu
[2024-04-27 20:46:25] 2024-04-28 00:46:06,530 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2024-04-27 20:46:25] 2024-04-28 00:46:06,531 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 20:46:25] 2024-04-28 00:46:06,580 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 20:46:25] 2024-04-28 00:46:08,325 | INFO     | 2889s have passed since pilot start
[2024-04-27 20:46:25] 2024-04-28 00:46:10,723 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 20:46:25] 2024-04-28 00:46:10,723 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6185237142/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 20:46:25] 2024-04-28 00:46:10,724 | INFO     | extracted standard info from prmon json
[2024-04-27 20:46:25] 2024-04-28 00:46:10,724 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 20:46:25] 2024-04-28 00:46:10,724 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 20:46:25] 2024-04-28 00:46:10,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 20:46:25] 2024-04-28 00:46:10,725 | INFO     | fitting pss+swap vs Time
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | current memory leak: -51.27 B/s (using 40 data points, chi2=0.05)
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | ..............................
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | . Timing measurements:
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | . get job = 0 s
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | . initial setup = 1 s
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | . payload setup = 4 s
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | . stage-in = 0 s
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | . payload execution = 2861 s
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | . stage-out = 0 s
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | . log creation = 0 s
[2024-04-27 20:46:25] 2024-04-28 00:46:10,726 | INFO     | ..............................
[2024-04-27 20:46:25] 2024-04-28 00:46:10,890 | WARNING  | process 3147626 is no longer using CPU - aborting
[2024-04-27 20:46:25] 2024-04-28 00:46:10,890 | INFO     | aborting job monitoring since job object (job id=6185237142) has expired
[2024-04-27 20:46:25] 2024-04-28 00:46:11,250 | INFO     | 
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | job summary report
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | --------------------------------------------------
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | PanDA job id: 6185237142
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | task id: 38204359
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | errors: (none)
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | pilot state: finished 
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | transexitcode: 0
[2024-04-27 20:46:25] 2024-04-28 00:46:11,251 | INFO     | exeerrorcode: 0
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | exeerrordiag: 
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | exitcode: 0
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | exitmsg: OK
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | cpuconsumptiontime: 29568 s
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | nevents: 400
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | neventsw: 0
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | pid: 3147626
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | pgrp: 3147626
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | corecount: 12
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | event service: False
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | sizes: {0: 2374118, 1: 2375661, 4: 2375867, 11: 2375895, 2868: 2401174, 2869: 2410148, 2870: 2410332, 2875: 2410502}
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | --------------------------------------------------
[2024-04-27 20:46:25] 2024-04-28 00:46:11,252 | INFO     | 
[2024-04-27 20:46:25] 2024-04-28 00:46:11,253 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2024-04-27 20:46:25] 2024-04-28 00:46:11,267 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,267 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,267 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,267 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,269 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 20:46:25] 2024-04-28 00:46:11,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,269 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 20:46:25] 2024-04-28 00:46:11,269 | INFO     | job 6185237142 has completed (purged errors)
[2024-04-27 20:46:25] 2024-04-28 00:46:11,269 | INFO     | overall cleanup function is called
[2024-04-27 20:46:25] 2024-04-28 00:46:12,274 | INFO     | --- collectZombieJob: --- 10, [3147626]
[2024-04-27 20:46:25] 2024-04-28 00:46:12,275 | INFO     | zombie collector waiting for pid 3147626
[2024-04-27 20:46:25] 2024-04-28 00:46:12,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 20:46:25] 2024-04-28 00:46:13,278 | INFO     | collected zombie processes
[2024-04-27 20:46:25] 2024-04-28 00:46:13,279 | INFO     | will now attempt to kill all subprocesses of pid=3147626
[2024-04-27 20:46:25] 2024-04-28 00:46:13,338 | INFO     | process IDs to be killed: [3147626] (in reverse order)
[2024-04-27 20:46:25] 2024-04-28 00:46:13,381 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 20:46:25] 2024-04-28 00:46:13,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 20:46:25] 2024-04-28 00:46:13,385 | INFO     | did not find any defunct processes belonging to 3147626
[2024-04-27 20:46:25] 2024-04-28 00:46:13,389 | INFO     | did not find any defunct processes belonging to 3147626
[2024-04-27 20:46:25] 2024-04-28 00:46:13,389 | INFO     | ready for new job
[2024-04-27 20:46:25] 2024-04-28 00:46:13,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 20:46:25] 2024-04-28 00:46:13,390 | INFO     | *************************************
[2024-04-27 20:46:25] 2024-04-28 00:46:13,390 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 20:46:25] 2024-04-28 00:46:13,390 | INFO     | *************************************
[2024-04-27 20:46:25] 2024-04-28 00:46:13,390 | INFO     | 
[2024-04-27 20:46:25] 2024-04-28 00:46:13,413 | INFO     | architecture information:
[2024-04-27 20:46:25] 2024-04-28 00:46:13,413 | INFO     | executing command: cat /etc/os-release
[2024-04-27 20:46:25] 2024-04-28 00:46:13,422 | INFO     | cat /etc/os-release:
[2024-04-27 20:46:25] NAME="CentOS Linux"
[2024-04-27 20:46:25] VERSION="7 (Core)"
[2024-04-27 20:46:25] ID="centos"
[2024-04-27 20:46:25] ID_LIKE="rhel fedora"
[2024-04-27 20:46:25] VERSION_ID="7"
[2024-04-27 20:46:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 20:46:25] ANSI_COLOR="0;31"
[2024-04-27 20:46:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 20:46:25] HOME_URL="https://www.centos.org/"
[2024-04-27 20:46:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 20:46:25] 
[2024-04-27 20:46:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 20:46:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 20:46:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 20:46:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 20:46:25] 
[2024-04-27 20:46:25] 2024-04-28 00:46:13,423 | INFO     | *************************************
[2024-04-27 20:46:25] 2024-04-28 00:46:13,925 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2024-04-27 20:46:25] 2024-04-28 00:46:13,936 | INFO     | sufficient remaining disk space (396357533696 B)
[2024-04-27 20:46:25] 2024-04-28 00:46:13,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 20:46:25] 2024-04-28 00:46:13,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 20:46:25] 2024-04-28 00:46:13,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 20:46:25] 2024-04-28 00:46:13,937 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 20:46:25] 2024-04-28 00:46:13,938 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 20:46:25] 2024-04-28 00:46:13,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 20:46:25] 2024-04-28 00:46:13,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 20:46:25] 2024-04-28 00:46:14,054 | INFO     | all payload control threads have been joined
[2024-04-27 20:46:25] 2024-04-28 00:46:14,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 20:46:25] 2024-04-28 00:46:14,399 | INFO     | aborting loop
[2024-04-27 20:46:25] 2024-04-28 00:46:14,451 | INFO     | all data control threads have been joined
[2024-04-27 20:46:25] 2024-04-28 00:46:14,481 | INFO     | all job control threads have been joined
[2024-04-27 20:46:25] 2024-04-28 00:46:14,942 | INFO     | [job] retrieve thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,058 | INFO     | [payload] control thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,256 | INFO     | [payload] failed_post thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,326 | INFO     | [job] validate thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,402 | INFO     | [job] job monitor thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,422 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,454 | INFO     | [data] control thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,482 | INFO     | [job] control thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,530 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,570 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,578 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 20:46:25] 2024-04-28 00:46:15,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 20:46:25] 2024-04-28 00:46:15,802 | INFO     | [data] copytool_in thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:15,942 | INFO     | [data] copytool_out thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:16,282 | INFO     | [payload] validate_post thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:16,788 | INFO     | [job] queue monitor thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:19,682 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 20:46:25] 2024-04-28 00:46:20,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765489108800)>', '<ExcThread(monitor, started 139765064128256)>']
[2024-04-27 20:46:25] 2024-04-28 00:46:20,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 20:46:25] 2024-04-28 00:46:20,967 | INFO     | [monitor] control thread has ended
[2024-04-27 20:46:25] 2024-04-28 00:46:25,798 | INFO     | all workflow threads have been joined
[2024-04-27 20:46:25] 2024-04-28 00:46:25,799 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 20:46:25] 2024-04-28 00:46:25,799 | INFO     | traces error code: 0
[2024-04-27 20:46:25] 2024-04-28 00:46:25,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 20:46:25] 2024-04-28 00:46:25,852 [wrapper] ==== pilot stdout END ====
[2024-04-27 20:46:25] 2024-04-28 00:46:25,853 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 20:46:25] 2024-04-28 00:46:25,855 [wrapper] pilotpid: 3140605
[2024-04-27 20:46:25] 2024-04-28 00:46:25,857 [wrapper] Pilot exit status: 0
[2024-04-27 20:46:25] 2024-04-28 00:46:25,864 [wrapper] pandaids: 6185237142
[2024-04-27 20:46:25] 2024-04-28 00:46:25,897 [wrapper] cleanup: SIGTERM to supervisor_pilot 3182920 3140606
[2024-04-27 20:46:25] 2024-04-28 00:46:25,899 [wrapper] Test setup, not cleaning
[2024-04-27 20:46:25] 2024-04-28 00:46:25,900 [wrapper] ==== wrapper stdout END ====
[2024-04-27 20:46:25] 2024-04-28 00:46:25,902 [wrapper] ==== wrapper stderr END ====
[2024-04-27 20:46:25] 2024-04-28 00:46:25,905 [wrapper] apfmon messages muted
[2024-04-27 20:46:25]  *** Error codes and diagnostics ***
[2024-04-27 20:46:25]     "exeErrorCode": 0,
[2024-04-27 20:46:25]     "exeErrorDiag": "",
[2024-04-27 20:46:25]     "pilotErrorCode": 0,
[2024-04-27 20:46:25]     "pilotErrorDiag": "",
[2024-04-27 20:46:25]  *** Listing of results directory ***
[2024-04-27 20:46:25] total 697992
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc    462745 Apr 24 12:32 pilot3.tar.gz
[2024-04-27 20:46:25] -rwx------ 1 boinc boinc     32211 Apr 24 12:40 runpilot2-wrapper.sh
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc      6720 Apr 24 12:40 queuedata.json
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc       100 Apr 27 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 20:46:25] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 19:57 run_atlas
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc       105 Apr 27 19:57 job.xml
[2024-04-27 20:46:25] -rw-r--r-- 2 boinc boinc     17537 Apr 27 19:57 start_atlas.sh
[2024-04-27 20:46:25] drwxrwx--x 2 boinc boinc      4096 Apr 27 19:57 shared
[2024-04-27 20:46:25] -rw-r--r-- 2 boinc boinc    474809 Apr 27 19:57 input.tar.gz
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc      7598 Apr 27 19:57 init_data.xml
[2024-04-27 20:46:25] -rw-r--r-- 2 boinc boinc 520079101 Apr 27 19:57 EVNT.38204357._000171.pool.root.1
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc         0 Apr 27 19:57 boinc_lockfile
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc      2622 Apr 27 19:57 pandaJob.out
[2024-04-27 20:46:25] -rw------- 1 boinc boinc       460 Apr 27 19:57 setup.sh.local
[2024-04-27 20:46:25] -rw------- 1 boinc boinc    997154 Apr 27 19:57 agis_schedconf.cvmfs.json
[2024-04-27 20:46:25] -rw------- 1 boinc boinc         0 Apr 27 19:58 agis_ddmendpoints.agis.ALL.json
[2024-04-27 20:46:25] -rw------- 1 boinc boinc   1315307 Apr 27 19:58 cric_ddmendpoints.json
[2024-04-27 20:46:25] drwx------ 4 boinc boinc      4096 Apr 27 19:58 pilot3
[2024-04-27 20:46:25] -rw------- 1 boinc boinc 189845216 Apr 27 20:45 HITS.38204359._005560.pool.root.1
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc       530 Apr 27 20:45 boinc_task_state.xml
[2024-04-27 20:46:25] -rw------- 1 boinc boinc      1028 Apr 27 20:46 memory_monitor_summary.json
[2024-04-27 20:46:25] -rw------- 1 boinc boinc    350443 Apr 27 20:46 log.38204359._005560.job.log.tgz.1
[2024-04-27 20:46:25] -rw------- 1 boinc boinc        95 Apr 27 20:46 pilot_heartbeat.json
[2024-04-27 20:46:25] -rw------- 1 boinc boinc      7665 Apr 27 20:46 heartbeat.json
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc      8192 Apr 27 20:46 boinc_mmap_file
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc        27 Apr 27 20:46 wrapper_checkpoint.txt
[2024-04-27 20:46:25] -rw------- 1 boinc boinc      4342 Apr 27 20:46 pilotlog.txt
[2024-04-27 20:46:25] -rw------- 1 boinc boinc    315371 Apr 27 20:46 log.38204359._005560.job.log.1
[2024-04-27 20:46:25] -rw------- 1 boinc boinc       357 Apr 27 20:46 output.list
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc       620 Apr 27 20:46 runtime_log
[2024-04-27 20:46:25] -rw------- 1 boinc boinc    686080 Apr 27 20:46 result.tar.gz
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc     11459 Apr 27 20:46 runtime_log.err
[2024-04-27 20:46:25] -rw------- 1 boinc boinc       638 Apr 27 20:46 N4vKDm7quJ5n7Olcko1bjSoqABFKDmABFKDmOtvXDmvGGKDmKzIyan.diag
[2024-04-27 20:46:25] -rw-r--r-- 1 boinc boinc     20600 Apr 27 20:46 stderr.txt
[2024-04-27 20:46:25] HITS file was successfully produced:
[2024-04-27 20:46:25] -rw------- 1 boinc boinc 189845216 Apr 27 20:45 shared/HITS.pool.root.1
[2024-04-27 20:46:25]  *** Contents of shared directory: ***
[2024-04-27 20:46:25] total 694452
[2024-04-27 20:46:25] -rw-r--r-- 2 boinc boinc     17537 Apr 27 19:57 start_atlas.sh
[2024-04-27 20:46:25] -rw-r--r-- 2 boinc boinc    474809 Apr 27 19:57 input.tar.gz
[2024-04-27 20:46:25] -rw-r--r-- 2 boinc boinc 520079101 Apr 27 19:57 ATLAS.root_0
[2024-04-27 20:46:25] -rw------- 1 boinc boinc 189845216 Apr 27 20:45 HITS.pool.root.1
[2024-04-27 20:46:25] -rw------- 1 boinc boinc    686080 Apr 27 20:46 result.tar.gz
20:46:27 (3136085): run_atlas exited; CPU time 29525.599337
20:46:27 (3136085): called boinc_finish(0)

</stderr_txt>
]]>

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