Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
21:36:13 (3258988): wrapper (7.7.26015): starting
21:36:13 (3258988): wrapper: running run_atlas (--nthreads 12)
[2024-04-27 21:36:13] Arguments: --nthreads 12
[2024-04-27 21:36:13] Threads: 12
[2024-04-27 21:36:13] Checking for CVMFS
[2024-04-27 21:36:13] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-27 21:36:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-27 21:36:13] Running cvmfs_config stat atlas.cern.ch
[2024-04-27 21:36:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-27 21:36:13] 2.11.2.0 1768874 670 56296 132117 3 56 3005804 4194304 910 130560 0 1764497 99.454 1286832 14156 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-04-27 21:36:13] CVMFS is ok
[2024-04-27 21:36:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 21:36:13] Checking for apptainer binary...
[2024-04-27 21:36:13] apptainer is not installed, using version from CVMFS
[2024-04-27 21:36:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 21:36:14] Trebeth
[2024-04-27 21:36:14] apptainer works
[2024-04-27 21:36:14] Set ATHENA_PROC_NUMBER=12
[2024-04-27 21:36:14] Set ATHENA_CORE_NUMBER=12
[2024-04-27 21:36:14] Starting ATLAS job with PandaID=6185122391
[2024-04-27 21:36:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 22:27:41]  *** The last 200 lines of the pilot log: ***
[2024-04-27 22:27:41]  allow_wan=False
[2024-04-27 22:27:41]  checkinputsize=True
[2024-04-27 22:27:41]  checksum={'adler32': 'e91380e8'}
[2024-04-27 22:27:41]  dataset=mc23_13p6TeV.603415.PhPy8EG_NNPDF23_A14_ggH125_NNLOPS_tautaulp15hm20.simul.log.e8559_e8528_s4162_tid38204295_00
[2024-04-27 22:27:41]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 22:27:41]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 22:27:41]  direct_access_lan=False
[2024-04-27 22:27:41]  direct_access_wan=False
[2024-04-27 22:27:41]  domain=
[2024-04-27 22:27:41]  filesize=347108
[2024-04-27 22:27:41]  filetype=log
[2024-04-27 22:27:41]  guid=d49f41bd-a4e9-4b68-980d-5221ddaca06d
[2024-04-27 22:27:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 22:27:41]  is_tar=False
[2024-04-27 22:27:41]  lfn=log.38204295._003404.job.log.tgz.1
[2024-04-27 22:27:41]  mtime=0
[2024-04-27 22:27:41]  protocol_id=None
[2024-04-27 22:27:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 22:27:41]  replicas=None
[2024-04-27 22:27:41]  scope=mc23_13p6TeV
[2024-04-27 22:27:41]  status=None
[2024-04-27 22:27:41]  status_code=0
[2024-04-27 22:27:41]  storage_token=
[2024-04-27 22:27:41]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6185122391/log.38204295._003404.job.log.tgz.1
[2024-04-27 22:27:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/a8/log.38204295._003404.job.log.tgz.1
[2024-04-27 22:27:41]  workdir=None
[2024-04-27 22:27:41] ]
[2024-04-27 22:27:41] 2024-04-28 02:27:13,805 | INFO     | transferring file log.38204295._003404.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6185122391/log.38204295._003404.job.log.tgz.1 to /var/lib/boinc
[2024-04-27 22:27:41] 2024-04-28 02:27:13,805 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6185122391/log.38204295._003404.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.382042
[2024-04-27 22:27:41] 2024-04-28 02:27:13,817 | INFO     | adding to output.list: log.38204295._003404.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/a8/log.38204295._003404.job.log.tg
[2024-04-27 22:27:41] 2024-04-28 02:27:13,818 | INFO     | summary of transferred files:
[2024-04-27 22:27:41] 2024-04-28 02:27:13,818 | INFO     |  -- lfn=log.38204295._003404.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 22:27:41] 2024-04-28 02:27:13,818 | INFO     | stage-out finished correctly
[2024-04-27 22:27:41] 2024-04-28 02:27:14,181 | WARNING  | process 3270454 is no longer using CPU - aborting
[2024-04-27 22:27:41] 2024-04-28 02:27:14,181 | INFO     | will not send any job update
[2024-04-27 22:27:41] 2024-04-28 02:27:16,275 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 22:27:41] 2024-04-28 02:27:16,341 | INFO     | job 6185122391 has state=finished
[2024-04-27 22:27:41] 2024-04-28 02:27:16,341 | INFO     | preparing for final server update for job 6185122391 in state='finished'
[2024-04-27 22:27:41] 2024-04-28 02:27:16,341 | INFO     | this job has now completed (state=finished)
[2024-04-27 22:27:41] 2024-04-28 02:27:16,342 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 22:27:41] 2024-04-28 02:27:16,342 | INFO     | job 6185122391 has finished - writing final server update
[2024-04-27 22:27:41] 2024-04-28 02:27:16,342 | INFO     | total number of processed events: 400 (read)
[2024-04-27 22:27:41] 2024-04-28 02:27:16,362 | INFO     | executing command: lscpu
[2024-04-27 22:27:41] 2024-04-28 02:27:16,416 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2024-04-27 22:27:41] 2024-04-28 02:27:16,416 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 22:27:41] 2024-04-28 02:27:16,462 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 22:27:41] 2024-04-28 02:27:16,683 | INFO     | monitor loop #244: job 0:6185122391 is in state 'finished'
[2024-04-27 22:27:41] 2024-04-28 02:27:16,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 22:27:41] 2024-04-28 02:27:19,186 | INFO     | monitor loop #245: job 0:6185122391 is in state 'finished'
[2024-04-27 22:27:41] 2024-04-28 02:27:19,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 22:27:41] 2024-04-28 02:27:20,470 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 22:27:41] 2024-04-28 02:27:20,471 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6185122391/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 22:27:41] 2024-04-28 02:27:20,473 | INFO     | extracted standard info from prmon json
[2024-04-27 22:27:41] 2024-04-28 02:27:20,473 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 22:27:41] 2024-04-28 02:27:20,473 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 22:27:41] 2024-04-28 02:27:20,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 22:27:41] 2024-04-28 02:27:20,475 | INFO     | fitting pss+swap vs Time
[2024-04-27 22:27:41] 2024-04-28 02:27:20,476 | INFO     | current memory leak: -29.70 B/s (using 43 data points, chi2=0.47)
[2024-04-27 22:27:41] 2024-04-28 02:27:20,476 | INFO     | ..............................
[2024-04-27 22:27:41] 2024-04-28 02:27:20,476 | INFO     | . Timing measurements:
[2024-04-27 22:27:41] 2024-04-28 02:27:20,476 | INFO     | . get job = 0 s
[2024-04-27 22:27:41] 2024-04-28 02:27:20,476 | INFO     | . initial setup = 2 s
[2024-04-27 22:27:41] 2024-04-28 02:27:20,476 | INFO     | . payload setup = 3 s
[2024-04-27 22:27:41] 2024-04-28 02:27:20,476 | INFO     | . stage-in = 0 s
[2024-04-27 22:27:41] 2024-04-28 02:27:20,476 | INFO     | . payload execution = 3030 s
[2024-04-27 22:27:41] 2024-04-28 02:27:20,477 | INFO     | . stage-out = 0 s
[2024-04-27 22:27:41] 2024-04-28 02:27:20,477 | INFO     | . log creation = 0 s
[2024-04-27 22:27:41] 2024-04-28 02:27:20,477 | INFO     | ..............................
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | 
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | job summary report
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | --------------------------------------------------
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | PanDA job id: 6185122391
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | task id: 38204295
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | errors: (none)
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | pilot state: finished 
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | transexitcode: 0
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | exeerrorcode: 0
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | exeerrordiag: 
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | exitcode: 0
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | exitmsg: OK
[2024-04-27 22:27:41] 2024-04-28 02:27:20,539 | INFO     | cpuconsumptiontime: 30177 s
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | nevents: 400
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | neventsw: 0
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | pid: 3270454
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | pgrp: 3270454
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | corecount: 12
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | event service: False
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | sizes: {0: 2375554, 1: 2375753, 4: 2375959, 11: 2375987, 3038: 2410293, 3041: 2410293, 3045: 2410591}
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | --------------------------------------------------
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | 
[2024-04-27 22:27:41] 2024-04-28 02:27:20,540 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2024-04-27 22:27:41] 2024-04-28 02:27:20,552 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | job 6185122391 has completed (purged errors)
[2024-04-27 22:27:41] 2024-04-28 02:27:20,554 | INFO     | overall cleanup function is called
[2024-04-27 22:27:41] 2024-04-28 02:27:21,558 | INFO     | --- collectZombieJob: --- 10, [3270454]
[2024-04-27 22:27:41] 2024-04-28 02:27:21,559 | INFO     | zombie collector waiting for pid 3270454
[2024-04-27 22:27:41] 2024-04-28 02:27:21,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 22:27:41] 2024-04-28 02:27:22,562 | INFO     | collected zombie processes
[2024-04-27 22:27:41] 2024-04-28 02:27:22,563 | INFO     | will now attempt to kill all subprocesses of pid=3270454
[2024-04-27 22:27:41] 2024-04-28 02:27:22,626 | INFO     | process IDs to be killed: [3270454] (in reverse order)
[2024-04-27 22:27:41] 2024-04-28 02:27:22,679 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 22:27:41] 2024-04-28 02:27:22,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 22:27:41] 2024-04-28 02:27:22,685 | INFO     | did not find any defunct processes belonging to 3270454
[2024-04-27 22:27:41] 2024-04-28 02:27:22,690 | INFO     | did not find any defunct processes belonging to 3270454
[2024-04-27 22:27:41] 2024-04-28 02:27:22,690 | INFO     | ready for new job
[2024-04-27 22:27:41] 2024-04-28 02:27:22,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 22:27:41] 2024-04-28 02:27:22,691 | INFO     | *************************************
[2024-04-27 22:27:41] 2024-04-28 02:27:22,691 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 22:27:41] 2024-04-28 02:27:22,692 | INFO     | *************************************
[2024-04-27 22:27:41] 2024-04-28 02:27:22,692 | INFO     | 
[2024-04-27 22:27:41] 2024-04-28 02:27:22,713 | INFO     | architecture information:
[2024-04-27 22:27:41] 2024-04-28 02:27:22,713 | INFO     | executing command: cat /etc/os-release
[2024-04-27 22:27:41] 2024-04-28 02:27:22,724 | INFO     | cat /etc/os-release:
[2024-04-27 22:27:41] NAME="CentOS Linux"
[2024-04-27 22:27:41] VERSION="7 (Core)"
[2024-04-27 22:27:41] ID="centos"
[2024-04-27 22:27:41] ID_LIKE="rhel fedora"
[2024-04-27 22:27:41] VERSION_ID="7"
[2024-04-27 22:27:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 22:27:41] ANSI_COLOR="0;31"
[2024-04-27 22:27:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 22:27:41] HOME_URL="https://www.centos.org/"
[2024-04-27 22:27:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 22:27:41] 
[2024-04-27 22:27:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 22:27:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 22:27:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 22:27:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 22:27:41] 
[2024-04-27 22:27:41] 2024-04-28 02:27:22,725 | INFO     | *************************************
[2024-04-27 22:27:41] 2024-04-28 02:27:23,227 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2024-04-27 22:27:41] 2024-04-28 02:27:23,238 | INFO     | sufficient remaining disk space (397283426304 B)
[2024-04-27 22:27:41] 2024-04-28 02:27:23,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 22:27:41] 2024-04-28 02:27:23,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 22:27:41] 2024-04-28 02:27:23,238 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 22:27:41] 2024-04-28 02:27:23,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 22:27:41] 2024-04-28 02:27:23,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 22:27:41] 2024-04-28 02:27:23,239 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 22:27:41] 2024-04-28 02:27:23,239 | INFO     | aborting loop
[2024-04-27 22:27:41] 2024-04-28 02:27:23,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 22:27:41] 2024-04-28 02:27:23,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 22:27:41] 2024-04-28 02:27:23,942 | INFO     | all job control threads have been joined
[2024-04-27 22:27:41] 2024-04-28 02:27:24,058 | INFO     | all data control threads have been joined
[2024-04-27 22:27:41] 2024-04-28 02:27:24,242 | INFO     | [job] retrieve thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:24,243 | INFO     | [job] job monitor thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:24,258 | INFO     | [job] validate thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:24,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 22:27:41] 2024-04-28 02:27:24,394 | INFO     | [data] copytool_in thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:24,406 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:24,462 | INFO     | all payload control threads have been joined
[2024-04-27 22:27:41] 2024-04-28 02:27:24,531 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:24,802 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:24,946 | INFO     | [job] control thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:25,062 | INFO     | [data] control thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:25,466 | INFO     | [payload] control thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:25,548 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 22:27:41] 2024-04-28 02:27:25,554 | INFO     | [payload] validate_post thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:25,674 | INFO     | [payload] failed_post thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:26,392 | INFO     | [data] copytool_out thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:26,550 | INFO     | [job] queue monitor thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:27,242 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:33,934 | INFO     | job.realtimelogging is not enabled
[2024-04-27 22:27:41] 2024-04-28 02:27:34,938 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 22:27:41] 2024-04-28 02:27:36,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657911772992)>', '<ExcThread(monitor, started 139657346008832)>']
[2024-04-27 22:27:41] 2024-04-28 02:27:37,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 22:27:41] 2024-04-28 02:27:37,299 | INFO     | [monitor] control thread has ended
[2024-04-27 22:27:41] 2024-04-28 02:27:41,430 | INFO     | all workflow threads have been joined
[2024-04-27 22:27:41] 2024-04-28 02:27:41,431 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 22:27:41] 2024-04-28 02:27:41,431 | INFO     | traces error code: 0
[2024-04-27 22:27:41] 2024-04-28 02:27:41,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 22:27:41] 2024-04-28 02:27:41,489 [wrapper] ==== pilot stdout END ====
[2024-04-27 22:27:41] 2024-04-28 02:27:41,490 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 22:27:41] 2024-04-28 02:27:41,491 [wrapper] pilotpid: 3263489
[2024-04-27 22:27:41] 2024-04-28 02:27:41,493 [wrapper] Pilot exit status: 0
[2024-04-27 22:27:41] 2024-04-28 02:27:41,499 [wrapper] pandaids: 6185122391
[2024-04-27 22:27:41] 2024-04-28 02:27:41,531 [wrapper] cleanup: SIGTERM to supervisor_pilot 3323490 3263490
[2024-04-27 22:27:41] 2024-04-28 02:27:41,533 [wrapper] Test setup, not cleaning
[2024-04-27 22:27:41] 2024-04-28 02:27:41,535 [wrapper] ==== wrapper stdout END ====
[2024-04-27 22:27:41] 2024-04-28 02:27:41,537 [wrapper] ==== wrapper stderr END ====
[2024-04-27 22:27:41] 2024-04-28 02:27:41,539 [wrapper] apfmon messages muted
[2024-04-27 22:27:41]  *** Error codes and diagnostics ***
[2024-04-27 22:27:41]     "exeErrorCode": 0,
[2024-04-27 22:27:41]     "exeErrorDiag": "",
[2024-04-27 22:27:41]     "pilotErrorCode": 0,
[2024-04-27 22:27:41]     "pilotErrorDiag": "",
[2024-04-27 22:27:41]  *** Listing of results directory ***
[2024-04-27 22:27:41] total 696280
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc    462745 Apr 24 09:48 pilot3.tar.gz
[2024-04-27 22:27:41] -rwx------ 1 boinc boinc     32211 Apr 24 09:52 runpilot2-wrapper.sh
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc      6720 Apr 24 09:52 queuedata.json
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc       100 Apr 27 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 22:27:41] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 21:36 run_atlas
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc       105 Apr 27 21:36 job.xml
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc      7598 Apr 27 21:36 init_data.xml
[2024-04-27 22:27:41] -rw-r--r-- 2 boinc boinc 518325642 Apr 27 21:36 EVNT.38204293._000046.pool.root.1
[2024-04-27 22:27:41] -rw-r--r-- 2 boinc boinc     17537 Apr 27 21:36 start_atlas.sh
[2024-04-27 22:27:41] drwxrwx--x 2 boinc boinc      4096 Apr 27 21:36 shared
[2024-04-27 22:27:41] -rw-r--r-- 2 boinc boinc    474824 Apr 27 21:36 input.tar.gz
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc         0 Apr 27 21:36 boinc_lockfile
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc      2659 Apr 27 21:36 pandaJob.out
[2024-04-27 22:27:41] -rw------- 1 boinc boinc       460 Apr 27 21:36 setup.sh.local
[2024-04-27 22:27:41] -rw------- 1 boinc boinc    997146 Apr 27 21:36 agis_schedconf.cvmfs.json
[2024-04-27 22:27:41] -rw------- 1 boinc boinc         0 Apr 27 21:36 agis_ddmendpoints.agis.ALL.json
[2024-04-27 22:27:41] -rw------- 1 boinc boinc   1315307 Apr 27 21:36 cric_ddmendpoints.json
[2024-04-27 22:27:41] drwx------ 4 boinc boinc      4096 Apr 27 21:36 pilot3
[2024-04-27 22:27:41] -rw------- 1 boinc boinc        95 Apr 27 22:26 pilot_heartbeat.json
[2024-04-27 22:27:41] -rw------- 1 boinc boinc 189822941 Apr 27 22:26 HITS.38204295._003404.pool.root.1
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc       530 Apr 27 22:26 boinc_task_state.xml
[2024-04-27 22:27:41] -rw------- 1 boinc boinc      1028 Apr 27 22:27 memory_monitor_summary.json
[2024-04-27 22:27:41] -rw------- 1 boinc boinc    347108 Apr 27 22:27 log.38204295._003404.job.log.tgz.1
[2024-04-27 22:27:41] -rw------- 1 boinc boinc      7661 Apr 27 22:27 heartbeat.json
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc        27 Apr 27 22:27 wrapper_checkpoint.txt
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc      8192 Apr 27 22:27 boinc_mmap_file
[2024-04-27 22:27:41] -rw------- 1 boinc boinc      4414 Apr 27 22:27 pilotlog.txt
[2024-04-27 22:27:41] -rw------- 1 boinc boinc    330336 Apr 27 22:27 log.38204295._003404.job.log.1
[2024-04-27 22:27:41] -rw------- 1 boinc boinc       357 Apr 27 22:27 output.list
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc       620 Apr 27 22:27 runtime_log
[2024-04-27 22:27:41] -rw------- 1 boinc boinc    696320 Apr 27 22:27 result.tar.gz
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc     11459 Apr 27 22:27 runtime_log.err
[2024-04-27 22:27:41] -rw------- 1 boinc boinc       638 Apr 27 22:27 rtdMDmyDsJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDme7QKDmKvzgvm.diag
[2024-04-27 22:27:41] -rw-r--r-- 1 boinc boinc     20624 Apr 27 22:27 stderr.txt
[2024-04-27 22:27:41] HITS file was successfully produced:
[2024-04-27 22:27:41] -rw------- 1 boinc boinc 189822941 Apr 27 22:26 shared/HITS.pool.root.1
[2024-04-27 22:27:41]  *** Contents of shared directory: ***
[2024-04-27 22:27:41] total 692728
[2024-04-27 22:27:41] -rw-r--r-- 2 boinc boinc 518325642 Apr 27 21:36 ATLAS.root_0
[2024-04-27 22:27:41] -rw-r--r-- 2 boinc boinc     17537 Apr 27 21:36 start_atlas.sh
[2024-04-27 22:27:41] -rw-r--r-- 2 boinc boinc    474824 Apr 27 21:36 input.tar.gz
[2024-04-27 22:27:41] -rw------- 1 boinc boinc 189822941 Apr 27 22:26 HITS.pool.root.1
[2024-04-27 22:27:41] -rw------- 1 boinc boinc    696320 Apr 27 22:27 result.tar.gz
22:27:43 (3258988): run_atlas exited; CPU time 30132.722434
22:27:43 (3258988): called boinc_finish(0)

</stderr_txt>
]]>

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