Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
19:53:40 (3113547): wrapper (7.7.26015): starting
19:53:40 (3113547): wrapper: running run_atlas (--nthreads 12)
[2024-04-27 19:53:40] Arguments: --nthreads 12
[2024-04-27 19:53:40] Threads: 12
[2024-04-27 19:53:40] Checking for CVMFS
[2024-04-27 19:53:40] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-27 19:53:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-27 19:53:40] Running cvmfs_config stat atlas.cern.ch
[2024-04-27 19:53:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-27 19:53:40] 2.11.2.0 1768874 567 55436 132115 1 56 2995415 4194305 910 130560 0 1458952 99.340 1284728 14384 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-04-27 19:53:40] CVMFS is ok
[2024-04-27 19:53:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 19:53:40] Checking for apptainer binary...
[2024-04-27 19:53:40] apptainer is not installed, using version from CVMFS
[2024-04-27 19:53:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 19:53:41] Trebeth
[2024-04-27 19:53:41] apptainer works
[2024-04-27 19:53:41] Set ATHENA_PROC_NUMBER=12
[2024-04-27 19:53:41] Set ATHENA_CORE_NUMBER=12
[2024-04-27 19:53:41] Starting ATLAS job with PandaID=6184993757
[2024-04-27 19:53:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 20:56:39]  *** The last 200 lines of the pilot log: ***
[2024-04-27 20:56:39] 2024-04-28 00:56:11,022 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2024-04-27 20:56:39] 2024-04-28 00:56:11,022 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-04-27 20:56:39]  activity=['pl', 'pw', 'w', 'default']
[2024-04-27 20:56:39]  allow_lan=True
[2024-04-27 20:56:39]  allow_wan=False
[2024-04-27 20:56:39]  checkinputsize=True
[2024-04-27 20:56:39]  checksum={'adler32': 'd736d19b'}
[2024-04-27 20:56:39]  dataset=mc23_13p6TeV.603422.PhPy8EG_NNPDF23_A14_VBFH125_tautauh30h20.simul.log.e8559_e8528_s4162_tid38204279_00
[2024-04-27 20:56:39]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 20:56:39]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 20:56:39]  direct_access_lan=False
[2024-04-27 20:56:39]  direct_access_wan=False
[2024-04-27 20:56:39]  domain=
[2024-04-27 20:56:39]  filesize=356215
[2024-04-27 20:56:39]  filetype=log
[2024-04-27 20:56:39]  guid=5a20d8ae-78a8-4406-ac62-53ebd617d879
[2024-04-27 20:56:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 20:56:39]  is_tar=False
[2024-04-27 20:56:39]  lfn=log.38204279._024813.job.log.tgz.1
[2024-04-27 20:56:39]  mtime=0
[2024-04-27 20:56:39]  protocol_id=None
[2024-04-27 20:56:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 20:56:39]  replicas=None
[2024-04-27 20:56:39]  scope=mc23_13p6TeV
[2024-04-27 20:56:39]  status=None
[2024-04-27 20:56:39]  status_code=0
[2024-04-27 20:56:39]  storage_token=
[2024-04-27 20:56:39]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6184993757/log.38204279._024813.job.log.tgz.1
[2024-04-27 20:56:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/f4/log.38204279._024813.job.log.tgz.1
[2024-04-27 20:56:39]  workdir=None
[2024-04-27 20:56:39] ]
[2024-04-27 20:56:39] 2024-04-28 00:56:11,049 | INFO     | transferring file log.38204279._024813.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6184993757/log.38204279._024813.job.log.tgz.1 to /var/lib/boinc
[2024-04-27 20:56:39] 2024-04-28 00:56:11,049 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6184993757/log.38204279._024813.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.382042
[2024-04-27 20:56:39] 2024-04-28 00:56:11,061 | INFO     | adding to output.list: log.38204279._024813.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/f4/log.38204279._024813.job.log.tg
[2024-04-27 20:56:39] 2024-04-28 00:56:11,062 | INFO     | summary of transferred files:
[2024-04-27 20:56:39] 2024-04-28 00:56:11,062 | INFO     |  -- lfn=log.38204279._024813.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 20:56:39] 2024-04-28 00:56:11,062 | INFO     | stage-out finished correctly
[2024-04-27 20:56:39] 2024-04-28 00:56:12,205 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 20:56:39] 2024-04-28 00:56:15,154 | INFO     | job 6184993757 has state=finished
[2024-04-27 20:56:39] 2024-04-28 00:56:15,155 | INFO     | preparing for final server update for job 6184993757 in state='finished'
[2024-04-27 20:56:39] 2024-04-28 00:56:15,155 | INFO     | this job has now completed (state=finished)
[2024-04-27 20:56:39] 2024-04-28 00:56:15,155 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 20:56:39] 2024-04-28 00:56:15,155 | INFO     | job 6184993757 has finished - writing final server update
[2024-04-27 20:56:39] 2024-04-28 00:56:15,156 | INFO     | total number of processed events: 400 (read)
[2024-04-27 20:56:39] 2024-04-28 00:56:15,178 | INFO     | executing command: lscpu
[2024-04-27 20:56:39] 2024-04-28 00:56:15,227 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2024-04-27 20:56:39] 2024-04-28 00:56:15,228 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 20:56:39] 2024-04-28 00:56:15,273 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 20:56:39] 2024-04-28 00:56:17,909 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 20:56:39] 2024-04-28 00:56:17,910 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6184993757/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 20:56:39] 2024-04-28 00:56:17,915 | INFO     | extracted standard info from prmon json
[2024-04-27 20:56:39] 2024-04-28 00:56:17,915 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 20:56:39] 2024-04-28 00:56:17,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 20:56:39] 2024-04-28 00:56:17,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 20:56:39] 2024-04-28 00:56:17,918 | INFO     | fitting pss+swap vs Time
[2024-04-27 20:56:39] 2024-04-28 00:56:17,918 | INFO     | current memory leak: 36.86 B/s (using 54 data points, chi2=0.43)
[2024-04-27 20:56:39] 2024-04-28 00:56:17,918 | INFO     | ..............................
[2024-04-27 20:56:39] 2024-04-28 00:56:17,918 | INFO     | . Timing measurements:
[2024-04-27 20:56:39] 2024-04-28 00:56:17,919 | INFO     | . get job = 0 s
[2024-04-27 20:56:39] 2024-04-28 00:56:17,919 | INFO     | . initial setup = 1 s
[2024-04-27 20:56:39] 2024-04-28 00:56:17,919 | INFO     | . payload setup = 3 s
[2024-04-27 20:56:39] 2024-04-28 00:56:17,919 | INFO     | . stage-in = 0 s
[2024-04-27 20:56:39] 2024-04-28 00:56:17,919 | INFO     | . payload execution = 3719 s
[2024-04-27 20:56:39] 2024-04-28 00:56:17,919 | INFO     | . stage-out = 0 s
[2024-04-27 20:56:39] 2024-04-28 00:56:17,919 | INFO     | . log creation = 0 s
[2024-04-27 20:56:39] 2024-04-28 00:56:17,919 | INFO     | ..............................
[2024-04-27 20:56:39] 2024-04-28 00:56:17,997 | WARNING  | process 3125062 is no longer using CPU - aborting
[2024-04-27 20:56:39] 2024-04-28 00:56:17,997 | INFO     | aborting job monitoring since job object (job id=6184993757) has expired
[2024-04-27 20:56:39] 2024-04-28 00:56:18,278 | INFO     | 
[2024-04-27 20:56:39] 2024-04-28 00:56:18,278 | INFO     | job summary report
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | --------------------------------------------------
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | PanDA job id: 6184993757
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | task id: 38204279
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | errors: (none)
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | pilot state: finished 
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | transexitcode: 0
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | exeerrorcode: 0
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | exeerrordiag: 
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | exitcode: 0
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | exitmsg: OK
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | cpuconsumptiontime: 37843 s
[2024-04-27 20:56:39] 2024-04-28 00:56:18,279 | INFO     | nevents: 400
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | neventsw: 0
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | pid: 3125062
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | pgrp: 3125062
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | corecount: 12
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | event service: False
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | sizes: {0: 2375515, 1: 2375714, 3: 2375920, 11: 2375948, 3727: 2401629, 3728: 2410786, 3730: 2410786, 3735: 2410956}
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | --------------------------------------------------
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | 
[2024-04-27 20:56:39] 2024-04-28 00:56:18,280 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-04-27 20:56:39] 2024-04-28 00:56:18,292 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,292 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | job 6184993757 has completed (purged errors)
[2024-04-27 20:56:39] 2024-04-28 00:56:18,294 | INFO     | overall cleanup function is called
[2024-04-27 20:56:39] 2024-04-28 00:56:19,302 | INFO     | --- collectZombieJob: --- 10, [3125062]
[2024-04-27 20:56:39] 2024-04-28 00:56:19,303 | INFO     | zombie collector waiting for pid 3125062
[2024-04-27 20:56:39] 2024-04-28 00:56:19,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 20:56:39] 2024-04-28 00:56:20,308 | INFO     | collected zombie processes
[2024-04-27 20:56:39] 2024-04-28 00:56:20,308 | INFO     | will now attempt to kill all subprocesses of pid=3125062
[2024-04-27 20:56:39] 2024-04-28 00:56:20,384 | INFO     | process IDs to be killed: [3125062] (in reverse order)
[2024-04-27 20:56:39] 2024-04-28 00:56:20,428 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 20:56:39] 2024-04-28 00:56:20,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 20:56:39] 2024-04-28 00:56:20,434 | INFO     | did not find any defunct processes belonging to 3125062
[2024-04-27 20:56:39] 2024-04-28 00:56:20,437 | INFO     | did not find any defunct processes belonging to 3125062
[2024-04-27 20:56:39] 2024-04-28 00:56:20,438 | INFO     | ready for new job
[2024-04-27 20:56:39] 2024-04-28 00:56:20,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 20:56:39] 2024-04-28 00:56:20,439 | INFO     | *************************************
[2024-04-27 20:56:39] 2024-04-28 00:56:20,439 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 20:56:39] 2024-04-28 00:56:20,439 | INFO     | *************************************
[2024-04-27 20:56:39] 2024-04-28 00:56:20,439 | INFO     | 
[2024-04-27 20:56:39] 2024-04-28 00:56:20,461 | INFO     | architecture information:
[2024-04-27 20:56:39] 2024-04-28 00:56:20,461 | INFO     | executing command: cat /etc/os-release
[2024-04-27 20:56:39] 2024-04-28 00:56:20,473 | INFO     | cat /etc/os-release:
[2024-04-27 20:56:39] NAME="CentOS Linux"
[2024-04-27 20:56:39] VERSION="7 (Core)"
[2024-04-27 20:56:39] ID="centos"
[2024-04-27 20:56:39] ID_LIKE="rhel fedora"
[2024-04-27 20:56:39] VERSION_ID="7"
[2024-04-27 20:56:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 20:56:39] ANSI_COLOR="0;31"
[2024-04-27 20:56:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 20:56:39] HOME_URL="https://www.centos.org/"
[2024-04-27 20:56:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 20:56:39] 
[2024-04-27 20:56:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 20:56:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 20:56:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 20:56:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 20:56:39] 
[2024-04-27 20:56:39] 2024-04-28 00:56:20,474 | INFO     | *************************************
[2024-04-27 20:56:39] 2024-04-28 00:56:20,976 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-04-27 20:56:39] 2024-04-28 00:56:20,990 | INFO     | sufficient remaining disk space (396930056192 B)
[2024-04-27 20:56:39] 2024-04-28 00:56:20,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 20:56:39] 2024-04-28 00:56:20,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 20:56:39] 2024-04-28 00:56:20,991 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 20:56:39] 2024-04-28 00:56:20,991 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 20:56:39] 2024-04-28 00:56:20,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 20:56:39] 2024-04-28 00:56:20,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 20:56:39] 2024-04-28 00:56:21,114 | INFO     | all payload control threads have been joined
[2024-04-27 20:56:39] 2024-04-28 00:56:21,274 | INFO     | all data control threads have been joined
[2024-04-27 20:56:39] 2024-04-28 00:56:21,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 20:56:39] 2024-04-28 00:56:21,503 | INFO     | aborting loop
[2024-04-27 20:56:39] 2024-04-28 00:56:21,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 20:56:39] 2024-04-28 00:56:21,994 | INFO     | [job] retrieve thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,118 | INFO     | [payload] control thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,225 | INFO     | all job control threads have been joined
[2024-04-27 20:56:39] 2024-04-28 00:56:22,278 | INFO     | [data] control thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,398 | INFO     | [job] validate thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,399 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,486 | INFO     | [payload] validate_post thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,498 | INFO     | [data] copytool_in thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,506 | INFO     | [job] job monitor thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,626 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,634 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:22,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 20:56:39] 2024-04-28 00:56:23,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 20:56:39] 2024-04-28 00:56:23,227 | INFO     | [job] control thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:23,514 | INFO     | [payload] failed_post thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:23,630 | INFO     | [data] copytool_out thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:24,002 | INFO     | [job] queue monitor thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:26,762 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:31,694 | INFO     | job.realtimelogging is not enabled
[2024-04-27 20:56:39] 2024-04-28 00:56:32,698 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 20:56:39] 2024-04-28 00:56:34,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658724910912)>', '<ExcThread(monitor, started 140658157283072)>']
[2024-04-27 20:56:39] 2024-04-28 00:56:35,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 20:56:39] 2024-04-28 00:56:35,051 | INFO     | [monitor] control thread has ended
[2024-04-27 20:56:39] 2024-04-28 00:56:39,546 | INFO     | all workflow threads have been joined
[2024-04-27 20:56:39] 2024-04-28 00:56:39,547 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 20:56:39] 2024-04-28 00:56:39,547 | INFO     | traces error code: 0
[2024-04-27 20:56:39] 2024-04-28 00:56:39,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 20:56:39] 2024-04-28 00:56:39,617 [wrapper] ==== pilot stdout END ====
[2024-04-27 20:56:39] 2024-04-28 00:56:39,620 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 20:56:39] 2024-04-28 00:56:39,622 [wrapper] pilotpid: 3118068
[2024-04-27 20:56:39] 2024-04-28 00:56:39,624 [wrapper] Pilot exit status: 0
[2024-04-27 20:56:39] 2024-04-28 00:56:39,630 [wrapper] pandaids: 6184993757
[2024-04-27 20:56:39] 2024-04-28 00:56:39,661 [wrapper] cleanup: SIGTERM to supervisor_pilot 3208728 3118069
[2024-04-27 20:56:39] 2024-04-28 00:56:39,663 [wrapper] Test setup, not cleaning
[2024-04-27 20:56:39] 2024-04-28 00:56:39,664 [wrapper] ==== wrapper stdout END ====
[2024-04-27 20:56:39] 2024-04-28 00:56:39,666 [wrapper] ==== wrapper stderr END ====
[2024-04-27 20:56:39] 2024-04-28 00:56:39,670 [wrapper] apfmon messages muted
[2024-04-27 20:56:39]  *** Error codes and diagnostics ***
[2024-04-27 20:56:39]     "exeErrorCode": 0,
[2024-04-27 20:56:39]     "exeErrorDiag": "",
[2024-04-27 20:56:39]     "pilotErrorCode": 0,
[2024-04-27 20:56:39]     "pilotErrorDiag": "",
[2024-04-27 20:56:39]  *** Listing of results directory ***
[2024-04-27 20:56:39] total 618160
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc    462745 Apr 24 05:50 pilot3.tar.gz
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc      6720 Apr 24 06:00 queuedata.json
[2024-04-27 20:56:39] -rwx------ 1 boinc boinc     32211 Apr 24 06:01 runpilot2-wrapper.sh
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc       100 Apr 27 19:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 20:56:39] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 19:53 run_atlas
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc       105 Apr 27 19:53 job.xml
[2024-04-27 20:56:39] -rw-r--r-- 2 boinc boinc 453184143 Apr 27 19:53 EVNT.38204277._000730.pool.root.1
[2024-04-27 20:56:39] -rw-r--r-- 2 boinc boinc     17537 Apr 27 19:53 start_atlas.sh
[2024-04-27 20:56:39] drwxrwx--x 2 boinc boinc      4096 Apr 27 19:53 shared
[2024-04-27 20:56:39] -rw-r--r-- 2 boinc boinc    474810 Apr 27 19:53 input.tar.gz
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc      7598 Apr 27 19:53 init_data.xml
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc         0 Apr 27 19:53 boinc_lockfile
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc      2583 Apr 27 19:53 pandaJob.out
[2024-04-27 20:56:39] -rw------- 1 boinc boinc       460 Apr 27 19:53 setup.sh.local
[2024-04-27 20:56:39] -rw------- 1 boinc boinc    997154 Apr 27 19:53 agis_schedconf.cvmfs.json
[2024-04-27 20:56:39] -rw------- 1 boinc boinc         0 Apr 27 19:53 agis_ddmendpoints.agis.ALL.json
[2024-04-27 20:56:39] -rw------- 1 boinc boinc   1315307 Apr 27 19:53 cric_ddmendpoints.json
[2024-04-27 20:56:39] drwx------ 4 boinc boinc      4096 Apr 27 19:53 pilot3
[2024-04-27 20:56:39] -rw------- 1 boinc boinc 174824286 Apr 27 20:55 HITS.38204279._024813.pool.root.1
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc       530 Apr 27 20:55 boinc_task_state.xml
[2024-04-27 20:56:39] -rw------- 1 boinc boinc        95 Apr 27 20:55 pilot_heartbeat.json
[2024-04-27 20:56:39] -rw------- 1 boinc boinc      1030 Apr 27 20:56 memory_monitor_summary.json
[2024-04-27 20:56:39] -rw------- 1 boinc boinc    356215 Apr 27 20:56 log.38204279._024813.job.log.tgz.1
[2024-04-27 20:56:39] -rw------- 1 boinc boinc      7664 Apr 27 20:56 heartbeat.json
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc        27 Apr 27 20:56 wrapper_checkpoint.txt
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc      8192 Apr 27 20:56 boinc_mmap_file
[2024-04-27 20:56:39] -rw------- 1 boinc boinc      4414 Apr 27 20:56 pilotlog.txt
[2024-04-27 20:56:39] -rw------- 1 boinc boinc    393301 Apr 27 20:56 log.38204279._024813.job.log.1
[2024-04-27 20:56:39] -rw------- 1 boinc boinc       357 Apr 27 20:56 output.list
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc       620 Apr 27 20:56 runtime_log
[2024-04-27 20:56:39] -rw------- 1 boinc boinc    768000 Apr 27 20:56 result.tar.gz
[2024-04-27 20:56:39] -rw------- 1 boinc boinc       639 Apr 27 20:56 ZiPNDmqcoJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDmfINKDmDJCjDo.diag
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc     11459 Apr 27 20:56 runtime_log.err
[2024-04-27 20:56:39] -rw-r--r-- 1 boinc boinc     20592 Apr 27 20:56 stderr.txt
[2024-04-27 20:56:39] HITS file was successfully produced:
[2024-04-27 20:56:39] -rw------- 1 boinc boinc 174824286 Apr 27 20:55 shared/HITS.pool.root.1
[2024-04-27 20:56:39]  *** Contents of shared directory: ***
[2024-04-27 20:56:39] total 614536
[2024-04-27 20:56:39] -rw-r--r-- 2 boinc boinc 453184143 Apr 27 19:53 ATLAS.root_0
[2024-04-27 20:56:39] -rw-r--r-- 2 boinc boinc     17537 Apr 27 19:53 start_atlas.sh
[2024-04-27 20:56:39] -rw-r--r-- 2 boinc boinc    474810 Apr 27 19:53 input.tar.gz
[2024-04-27 20:56:39] -rw------- 1 boinc boinc 174824286 Apr 27 20:55 HITS.pool.root.1
[2024-04-27 20:56:39] -rw------- 1 boinc boinc    768000 Apr 27 20:56 result.tar.gz
20:56:41 (3113547): run_atlas exited; CPU time 37793.544183
20:56:41 (3113547): called boinc_finish(0)

</stderr_txt>
]]>

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