Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:15:09 (59771): wrapper (7.7.26015): starting
14:15:09 (59771): wrapper: running run_atlas (--nthreads 8)
[2024-04-24 14:15:09] Arguments: --nthreads 8
[2024-04-24 14:15:09] Threads: 8
[2024-04-24 14:15:09] Checking for CVMFS
[2024-04-24 14:15:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-24 14:15:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-24 14:15:11] Running cvmfs_config stat atlas.cern.ch
[2024-04-24 14:15:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-24 14:15:12] 2.11.2.0 118144 1031 152696 131997 2 307 15131838 18432000 23621 130560 0 10834143 98.927 30877000 45920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-04-24 14:15:12] CVMFS is ok
[2024-04-24 14:15:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-24 14:15:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-24 14:15:12] Further information can be found at the LHC@home message board.
[2024-04-24 14:15:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-24 14:15:12] Checking for apptainer binary...
[2024-04-24 14:15:12] Using apptainer found in PATH at /usr/bin/apptainer
[2024-04-24 14:15:12] Running /usr/bin/apptainer --version
[2024-04-24 14:15:12] apptainer version 1.3.0-1.el7
[2024-04-24 14:15:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-24 14:15:24] c-211-33-2.aglt2.org
[2024-04-24 14:15:24] apptainer works
[2024-04-24 14:15:24] Set ATHENA_PROC_NUMBER=8
[2024-04-24 14:15:24] Set ATHENA_CORE_NUMBER=8
[2024-04-24 14:15:24] Starting ATLAS job with PandaID=6177534078
[2024-04-24 14:15:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-24 19:06:49]  *** The last 200 lines of the pilot log: ***
[2024-04-24 19:06:50] 2024-04-24 23:05:36,415 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-04-24 19:06:50] 2024-04-24 23:05:36,415 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-24 19:06:50] 2024-04-24 23:05:36,705 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-24 19:06:50] 2024-04-24 23:05:38,582 | INFO     | monitor loop #1167: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:38,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:05:41,087 | INFO     | monitor loop #1168: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:41,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:05:43,592 | INFO     | monitor loop #1169: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:43,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:05:46,098 | INFO     | monitor loop #1170: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:46,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:05:48,608 | INFO     | monitor loop #1171: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:48,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:05:51,113 | INFO     | monitor loop #1172: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:51,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:05:53,618 | INFO     | monitor loop #1173: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:53,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:05:56,122 | INFO     | monitor loop #1174: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:56,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:05:58,647 | INFO     | monitor loop #1175: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:05:58,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:01,155 | INFO     | monitor loop #1176: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:01,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:03,660 | INFO     | monitor loop #1177: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:03,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:06,165 | INFO     | monitor loop #1178: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:06,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:08,672 | INFO     | monitor loop #1179: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:08,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:11,176 | INFO     | monitor loop #1180: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:11,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:13,681 | INFO     | monitor loop #1181: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:13,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:16,186 | INFO     | monitor loop #1182: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:16,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:18,694 | INFO     | monitor loop #1183: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:18,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:21,200 | INFO     | monitor loop #1184: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:21,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:23,705 | INFO     | monitor loop #1185: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:23,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:26,212 | INFO     | monitor loop #1186: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:26,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:28,716 | INFO     | monitor loop #1187: job 0:6177534078 is in state 'finished'
[2024-04-24 19:06:50] 2024-04-24 23:06:28,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-24 19:06:50] 2024-04-24 23:06:28,969 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-24 19:06:50] 2024-04-24 23:06:28,970 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6177534078/memory_monitor_summary.json (trf name=prmon)
[2024-04-24 19:06:50] 2024-04-24 23:06:28,971 | INFO     | extracted standard info from prmon json
[2024-04-24 19:06:50] 2024-04-24 23:06:28,971 | INFO     | extracted standard memory fields from prmon json
[2024-04-24 19:06:50] 2024-04-24 23:06:28,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-24 19:06:50] 2024-04-24 23:06:28,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-24 19:06:50] 2024-04-24 23:06:28,980 | INFO     | fitting pss+swap vs Time
[2024-04-24 19:06:50] 2024-04-24 23:06:29,004 | INFO     | current chi2=5.524207100416348 (change=12.723100827468075 %)
[2024-04-24 19:06:50] 2024-04-24 23:06:29,004 | INFO     | right removable region: 275
[2024-04-24 19:06:50] 2024-04-24 23:06:29,011 | INFO     | current chi2=2.4470438100760252 (change=61.33917646449619 %)
[2024-04-24 19:06:50] 2024-04-24 23:06:29,013 | INFO     | current chi2=1.138969388869015 (change=53.45529229271831 %)
[2024-04-24 19:06:50] 2024-04-24 23:06:29,020 | INFO     | current chi2=0.9180606094419919 (change=19.395497507302053 %)
[2024-04-24 19:06:50] 2024-04-24 23:06:29,020 | INFO     | left removable region: 30
[2024-04-24 19:06:50] 2024-04-24 23:06:29,027 | INFO     | current memory leak: 3.19 B/s (using 245 data points, chi2=0.00)
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | ..............................
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | . Timing measurements:
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | . get job = 0 s
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | . initial setup = 2 s
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | . payload setup = 62 s
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | . stage-in = 0 s
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | . payload execution = 17162 s
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | . stage-out = 4 s
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | . log creation = 1 s
[2024-04-24 19:06:50] 2024-04-24 23:06:29,028 | INFO     | ..............................
[2024-04-24 19:06:50] 2024-04-24 23:06:29,241 | INFO     | 
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | job summary report
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | --------------------------------------------------
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | PanDA job id: 6177534078
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | task id: 38106845
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | errors: (none)
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | pilot state: finished 
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | transexitcode: 0
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | exeerrorcode: 0
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | exeerrordiag: 
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | exitcode: 0
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | exitmsg: OK
[2024-04-24 19:06:50] 2024-04-24 23:06:29,242 | INFO     | cpuconsumptiontime: 53127 s
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | nevents: 400
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | neventsw: 0
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | pid: 153725
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | pgrp: 153725
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | corecount: 8
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | event service: False
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | sizes: {0: 2374563, 1: 2375498, 12: 2375498, 23: 2375526, 33: 2375554, 39: 2375788, 44: 2375944, 17228: 2407600, 17233: 2416560, 17235: 2416616, 17289: 2416786}
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | --------------------------------------------------
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | 
[2024-04-24 19:06:50] 2024-04-24 23:06:29,243 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-04-24 19:06:50] 2024-04-24 23:06:29,536 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,537 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,537 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,537 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | job 6177534078 has completed (purged errors)
[2024-04-24 19:06:50] 2024-04-24 23:06:29,538 | INFO     | overall cleanup function is called
[2024-04-24 19:06:50] 2024-04-24 23:06:30,318 | INFO     | 17376s have passed since pilot start
[2024-04-24 19:06:50] 2024-04-24 23:06:30,551 | INFO     | --- collectZombieJob: --- 10, [153725]
[2024-04-24 19:06:50] 2024-04-24 23:06:30,552 | INFO     | zombie collector waiting for pid 153725
[2024-04-24 19:06:50] 2024-04-24 23:06:30,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-24 19:06:50] 2024-04-24 23:06:31,562 | INFO     | collected zombie processes
[2024-04-24 19:06:50] 2024-04-24 23:06:31,563 | INFO     | will now attempt to kill all subprocesses of pid=153725
[2024-04-24 19:06:50] 2024-04-24 23:06:31,886 | INFO     | process IDs to be killed: [153725] (in reverse order)
[2024-04-24 19:06:50] 2024-04-24 23:06:32,259 | WARNING  | found no corresponding commands to process id(s)
[2024-04-24 19:06:50] 2024-04-24 23:06:32,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-24 19:06:50] 2024-04-24 23:06:32,274 | INFO     | did not find any defunct processes belonging to 153725
[2024-04-24 19:06:50] 2024-04-24 23:06:32,289 | INFO     | did not find any defunct processes belonging to 153725
[2024-04-24 19:06:50] 2024-04-24 23:06:32,289 | INFO     | ready for new job
[2024-04-24 19:06:50] 2024-04-24 23:06:32,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-24 19:06:50] 2024-04-24 23:06:32,291 | INFO     | *************************************
[2024-04-24 19:06:50] 2024-04-24 23:06:32,291 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-24 19:06:50] 2024-04-24 23:06:32,291 | INFO     | *************************************
[2024-04-24 19:06:50] 2024-04-24 23:06:32,291 | INFO     | 
[2024-04-24 19:06:50] 2024-04-24 23:06:32,296 | INFO     | architecture information:
[2024-04-24 19:06:50] 2024-04-24 23:06:32,297 | INFO     | executing command: cat /etc/os-release
[2024-04-24 19:06:50] 2024-04-24 23:06:32,458 | INFO     | cat /etc/os-release:
[2024-04-24 19:06:50] NAME="CentOS Linux"
[2024-04-24 19:06:50] VERSION="7 (Core)"
[2024-04-24 19:06:50] ID="centos"
[2024-04-24 19:06:50] ID_LIKE="rhel fedora"
[2024-04-24 19:06:50] VERSION_ID="7"
[2024-04-24 19:06:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-24 19:06:50] ANSI_COLOR="0;31"
[2024-04-24 19:06:50] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-24 19:06:50] HOME_URL="https://www.centos.org/"
[2024-04-24 19:06:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-24 19:06:50] 
[2024-04-24 19:06:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-24 19:06:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-24 19:06:50] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-24 19:06:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-24 19:06:50] 
[2024-04-24 19:06:50] 2024-04-24 23:06:32,459 | INFO     | *************************************
[2024-04-24 19:06:50] 2024-04-24 23:06:32,961 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-04-24 19:06:50] 2024-04-24 23:06:33,096 | INFO     | sufficient remaining disk space (100843651072 B)
[2024-04-24 19:06:50] 2024-04-24 23:06:33,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-24 19:06:50] 2024-04-24 23:06:33,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-24 19:06:50] 2024-04-24 23:06:33,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-24 19:06:50] 2024-04-24 23:06:33,097 | INFO     | aborting loop
[2024-04-24 19:06:50] 2024-04-24 23:06:33,332 | INFO     | found 0 job(s) in 20 queues
[2024-04-24 19:06:50] 2024-04-24 23:06:33,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-24 19:06:50] 2024-04-24 23:06:33,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-24 19:06:50] 2024-04-24 23:06:33,477 | INFO     | all data control threads have been joined
[2024-04-24 19:06:50] 2024-04-24 23:06:34,103 | INFO     | [job] retrieve thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:34,103 | INFO     | [job] job monitor thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:34,157 | INFO     | all payload control threads have been joined
[2024-04-24 19:06:50] 2024-04-24 23:06:34,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-24 19:06:50] 2024-04-24 23:06:34,378 | INFO     | all job control threads have been joined
[2024-04-24 19:06:50] 2024-04-24 23:06:34,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-24 19:06:50] 2024-04-24 23:06:34,427 | INFO     | [payload] validate_post thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:34,483 | INFO     | [data] control thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:34,583 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:34,736 | INFO     | [payload] execute_payloads thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:34,754 | INFO     | [job] create_data_payload thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:34,757 | INFO     | [job] validate thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:34,770 | INFO     | [data] copytool_in thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:35,038 | INFO     | [payload] validate_pre thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:35,154 | INFO     | [payload] failed_post thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:35,173 | INFO     | [payload] control thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:35,263 | INFO     | [job] queue monitor thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:35,384 | INFO     | [job] control thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:36,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-24 19:06:50] 2024-04-24 23:06:36,410 | INFO     | [data] copytool_out thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:40,143 | INFO     | [data] queue_monitor thread has finished
[2024-04-24 19:06:50] 2024-04-24 23:06:42,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198056490816)>', '<ExcThread(monitor, started 140197236819712)>']
[2024-04-24 19:06:50] 2024-04-24 23:06:42,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-24 19:06:50] 2024-04-24 23:06:42,422 | INFO     | [monitor] control thread has ended
[2024-04-24 19:06:50] 2024-04-24 23:06:47,256 | INFO     | all workflow threads have been joined
[2024-04-24 19:06:50] 2024-04-24 23:06:47,257 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-24 19:06:50] 2024-04-24 23:06:47,257 | INFO     | traces error code: 0
[2024-04-24 19:06:50] 2024-04-24 23:06:47,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-24 19:06:50] 2024-04-24 23:06:48,167 [wrapper] ==== pilot stdout END ====
[2024-04-24 19:06:50] 2024-04-24 23:06:48,193 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-24 19:06:50] 2024-04-24 23:06:48,239 [wrapper] pilotpid: 89860
[2024-04-24 19:06:50] 2024-04-24 23:06:48,279 [wrapper] Pilot exit status: 0
[2024-04-24 19:06:50] 2024-04-24 23:06:48,371 [wrapper] pandaids: 6177534078
[2024-04-24 19:06:50] 2024-04-24 23:06:48,584 [wrapper] cleanup: SIGTERM to supervisor_pilot   4419 89861
[2024-04-24 19:06:50] 2024-04-24 23:06:48,623 [wrapper] Test setup, not cleaning
[2024-04-24 19:06:50] 2024-04-24 23:06:48,666 [wrapper] ==== wrapper stdout END ====
[2024-04-24 19:06:50] 2024-04-24 23:06:48,705 [wrapper] ==== wrapper stderr END ====
[2024-04-24 19:06:50] 2024-04-24 23:06:48,788 [wrapper] apfmon messages muted
[2024-04-24 19:06:50]  *** Error codes and diagnostics ***
[2024-04-24 19:06:50]     "exeErrorCode": 0,
[2024-04-24 19:06:50]     "exeErrorDiag": "",
[2024-04-24 19:06:50]     "pilotErrorCode": 0,
[2024-04-24 19:06:50]     "pilotErrorDiag": "",
[2024-04-24 19:06:50]  *** Listing of results directory ***
[2024-04-24 19:06:50] total 729128
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas    462745 Apr 16 06:59 pilot3.tar.gz
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas      6185 Apr 16 07:47 queuedata.json
[2024-04-24 19:06:50] -rwx------ 1 boincer umatlas     32211 Apr 16 07:47 runpilot2-wrapper.sh
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas       100 Apr 24 14:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-24 19:06:50] -rwxr-xr-x 1 boincer umatlas      7986 Apr 24 14:14 run_atlas
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas       105 Apr 24 14:14 job.xml
[2024-04-24 19:06:50] -rw-r--r-- 2 boincer umatlas 527577083 Apr 24 14:15 EVNT.38106843._000682.pool.root.1
[2024-04-24 19:06:50] -rw-r--r-- 2 boincer umatlas     17537 Apr 24 14:15 start_atlas.sh
[2024-04-24 19:06:50] drwxrwx--x 2 boincer umatlas      4096 Apr 24 14:15 shared
[2024-04-24 19:06:50] -rw-r--r-- 2 boincer umatlas    474751 Apr 24 14:15 input.tar.gz
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas         0 Apr 24 14:15 boinc_lockfile
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas      2550 Apr 24 14:15 pandaJob.out
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas       424 Apr 24 14:15 setup.sh.local
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas    990260 Apr 24 14:16 agis_schedconf.cvmfs.json
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas   1315027 Apr 24 14:16 cric_ddmendpoints.json
[2024-04-24 19:06:50] drwx------ 4 boincer umatlas      4096 Apr 24 14:16 pilot3
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas      6301 Apr 24 19:02 init_data.xml
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas 211947355 Apr 24 19:03 HITS.38106845._018222.pool.root.1
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas       532 Apr 24 19:04 boinc_task_state.xml
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas      1066 Apr 24 19:05 memory_monitor_summary.json
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas         0 Apr 24 19:05 agis_ddmendpoints.agis.ALL.json
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas    419104 Apr 24 19:05 log.38106845._018222.job.log.tgz.1
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas        95 Apr 24 19:06 pilot_heartbeat.json
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas      7759 Apr 24 19:06 heartbeat.json
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas      8192 Apr 24 19:06 boinc_mmap_file
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas        28 Apr 24 19:06 wrapper_checkpoint.txt
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas      4212 Apr 24 19:06 pilotlog.txt
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas   1391455 Apr 24 19:06 log.38106845._018222.job.log.1
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas       357 Apr 24 19:06 output.list
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas       620 Apr 24 19:06 runtime_log
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas   1832960 Apr 24 19:06 result.tar.gz
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas     11010 Apr 24 19:06 runtime_log.err
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas       651 Apr 24 19:06 Jm3MDmCTwG5nsSi4apGgGQJmABFKDmABFKDmRLXKDmuXFKDmcIGqGo.diag
[2024-04-24 19:06:50] -rw-r--r-- 1 boincer umatlas     22711 Apr 24 19:06 stderr.txt
[2024-04-24 19:06:50] HITS file was successfully produced:
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas 211947355 Apr 24 19:03 shared/HITS.pool.root.1
[2024-04-24 19:06:50]  *** Contents of shared directory: ***
[2024-04-24 19:06:50] total 724476
[2024-04-24 19:06:50] -rw-r--r-- 2 boincer umatlas 527577083 Apr 24 14:15 ATLAS.root_0
[2024-04-24 19:06:50] -rw-r--r-- 2 boincer umatlas     17537 Apr 24 14:15 start_atlas.sh
[2024-04-24 19:06:50] -rw-r--r-- 2 boincer umatlas    474751 Apr 24 14:15 input.tar.gz
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas 211947355 Apr 24 19:03 HITS.pool.root.1
[2024-04-24 19:06:50] -rw------- 1 boincer umatlas   1832960 Apr 24 19:06 result.tar.gz
19:06:52 (59771): run_atlas exited; CPU time 52762.751493
19:06:52 (59771): called boinc_finish(0)

</stderr_txt>
]]>

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