Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:41:06 (964768): wrapper (7.7.26015): starting
10:41:06 (964768): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 10:41:06] Arguments: --nthreads 4
[2024-04-26 10:41:06] Threads: 4
[2024-04-26 10:41:06] Checking for CVMFS
[2024-04-26 10:41:06] No cvmfs_config command found, will try listing directly
[2024-04-26 10:41:06] CVMFS is ok
[2024-04-26 10:41:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 10:41:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 10:41:06] Further information can be found at the LHC@home message board.
[2024-04-26 10:41:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 10:41:06] Checking for apptainer binary...
[2024-04-26 10:41:06] which: no apptainer in ((null))
[2024-04-26 10:41:06] apptainer is not installed, using version from CVMFS
[2024-04-26 10:41:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 10:41:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-04-26 10:41:07] apptainer works
[2024-04-26 10:41:07] Set ATHENA_PROC_NUMBER=4
[2024-04-26 10:41:07] Set ATHENA_CORE_NUMBER=4
[2024-04-26 10:41:07] Starting ATLAS job with PandaID=6177444223
[2024-04-26 10:41:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 14:09:27]  *** The last 200 lines of the pilot log: ***
[2024-04-26 14:09:27]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-26 14:09:27]  direct_access_lan=False
[2024-04-26 14:09:27]  direct_access_wan=False
[2024-04-26 14:09:27]  domain=
[2024-04-26 14:09:27]  filesize=304769
[2024-04-26 14:09:27]  filetype=log
[2024-04-26 14:09:27]  guid=b4bc27e3-6da8-4729-bf1b-384e3119abbc
[2024-04-26 14:09:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 14:09:27]  is_tar=False
[2024-04-26 14:09:27]  lfn=log.38106845._016321.job.log.tgz.1
[2024-04-26 14:09:27]  mtime=0
[2024-04-26 14:09:27]  protocol_id=None
[2024-04-26 14:09:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 14:09:27]  replicas=None
[2024-04-26 14:09:27]  scope=mc23_13p6TeV
[2024-04-26 14:09:27]  status=None
[2024-04-26 14:09:27]  status_code=0
[2024-04-26 14:09:27]  storage_token=
[2024-04-26 14:09:27]  surl=/scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6177444223/log.38106845._016321.job.log.tgz.1
[2024-04-26 14:09:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/02/log.38106845._016321.job.log.tgz.1
[2024-04-26 14:09:27]  workdir=None
[2024-04-26 14:09:27] ]
[2024-04-26 14:09:27] 2024-04-26 12:09:04,223 | INFO     | transferring file log.38106845._016321.job.log.tgz.1 from /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6177444223/log.38106845._016321.job.log.tgz.1 to /scratch/
[2024-04-26 14:09:27] 2024-04-26 12:09:04,223 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6177444223/log.38106845._016321.job.log.tgz.1 /scratch/boinc/var/slot124/slots/0/
[2024-04-26 14:09:27] 2024-04-26 12:09:04,246 | INFO     | adding to output.list: log.38106845._016321.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/02/log.38106845._016321.job.log.tg
[2024-04-26 14:09:27] 2024-04-26 12:09:04,247 | INFO     | summary of transferred files:
[2024-04-26 14:09:27] 2024-04-26 12:09:04,247 | INFO     |  -- lfn=log.38106845._016321.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 14:09:27] 2024-04-26 12:09:04,247 | INFO     | stage-out finished correctly
[2024-04-26 14:09:27] 2024-04-26 12:09:04,340 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 14:09:27] 2024-04-26 12:09:04,981 | INFO     | job 6177444223 has state=finished
[2024-04-26 14:09:27] 2024-04-26 12:09:04,981 | INFO     | preparing for final server update for job 6177444223 in state='finished'
[2024-04-26 14:09:27] 2024-04-26 12:09:04,981 | INFO     | this job has now completed (state=finished)
[2024-04-26 14:09:27] 2024-04-26 12:09:04,981 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 14:09:27] 2024-04-26 12:09:04,981 | INFO     | job 6177444223 has finished - writing final server update
[2024-04-26 14:09:27] 2024-04-26 12:09:04,982 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1487351/.job.ad'
[2024-04-26 14:09:27] 2024-04-26 12:09:04,982 | INFO     | total number of processed events: 400 (read)
[2024-04-26 14:09:27] 2024-04-26 12:09:04,988 | INFO     | executing command: lscpu
[2024-04-26 14:09:27] 2024-04-26 12:09:05,030 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-26 14:09:27] 2024-04-26 12:09:05,031 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 14:09:27] 2024-04-26 12:09:05,074 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 14:09:27] 2024-04-26 12:09:06,158 | INFO     | monitor loop #941: job 0:6177444223 is in state 'finished'
[2024-04-26 14:09:27] 2024-04-26 12:09:06,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 14:09:27] 2024-04-26 12:09:08,661 | INFO     | monitor loop #942: job 0:6177444223 is in state 'finished'
[2024-04-26 14:09:27] 2024-04-26 12:09:08,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,611 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 14:09:27] 2024-04-26 12:09:10,611 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6177444223/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,612 | INFO     | extracted standard info from prmon json
[2024-04-26 14:09:27] 2024-04-26 12:09:10,612 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 14:09:27] 2024-04-26 12:09:10,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 14:09:27] 2024-04-26 12:09:10,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 14:09:27] 2024-04-26 12:09:10,616 | INFO     | fitting pss+swap vs Time
[2024-04-26 14:09:27] 2024-04-26 12:09:10,619 | INFO     | current chi2=4.221156619747144 (change=0.02860724215387597 %)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,619 | INFO     | right removable region: 198
[2024-04-26 14:09:27] 2024-04-26 12:09:10,621 | INFO     | current chi2=1.649789675624275 (change=60.92735084547664 %)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,622 | INFO     | current chi2=0.07960286771843122 (change=95.17496873119237 %)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,623 | INFO     | current chi2=0.0006682900557670014 (change=99.16046987386076 %)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,624 | INFO     | current chi2=0.0006383994536885196 (change=4.472698915768858 %)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,624 | INFO     | left removable region: 40
[2024-04-26 14:09:27] 2024-04-26 12:09:10,625 | INFO     | current memory leak: 3.25 B/s (using 158 data points, chi2=0.00)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,625 | INFO     | ..............................
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | . Timing measurements:
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | . get job = 0 s
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | . initial setup = 1 s
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | . payload setup = 6 s
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | . stage-in = 0 s
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | . payload execution = 12437 s
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | . stage-out = 0 s
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | . log creation = 0 s
[2024-04-26 14:09:27] 2024-04-26 12:09:10,626 | INFO     | ..............................
[2024-04-26 14:09:27] 2024-04-26 12:09:10,701 | INFO     | 
[2024-04-26 14:09:27] 2024-04-26 12:09:10,701 | INFO     | job summary report
[2024-04-26 14:09:27] 2024-04-26 12:09:10,701 | INFO     | --------------------------------------------------
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | PanDA job id: 6177444223
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | task id: 38106845
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | errors: (none)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | pilot state: finished 
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | transexitcode: 0
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | exeerrorcode: 0
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | exeerrordiag: 
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | exitcode: 0
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | exitmsg: OK
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | cpuconsumptiontime: 46817 s
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | nevents: 400
[2024-04-26 14:09:27] 2024-04-26 12:09:10,702 | INFO     | neventsw: 0
[2024-04-26 14:09:27] 2024-04-26 12:09:10,703 | INFO     | pid: 978161
[2024-04-26 14:09:27] 2024-04-26 12:09:10,703 | INFO     | pgrp: 978161
[2024-04-26 14:09:27] 2024-04-26 12:09:10,703 | INFO     | corecount: 4
[2024-04-26 14:09:27] 2024-04-26 12:09:10,703 | INFO     | event service: False
[2024-04-26 14:09:27] 2024-04-26 12:09:10,703 | INFO     | sizes: {0: 2374673, 1: 2375608, 6: 2375814, 12: 2375842, 12448: 2405608, 12449: 2405607, 12451: 2414831, 12458: 2414945}
[2024-04-26 14:09:27] 2024-04-26 12:09:10,703 | INFO     | --------------------------------------------------
[2024-04-26 14:09:27] 2024-04-26 12:09:10,703 | INFO     | 
[2024-04-26 14:09:27] 2024-04-26 12:09:10,703 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2024-04-26 14:09:27] 2024-04-26 12:09:10,724 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,724 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,724 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,724 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,726 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,726 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 14:09:27] 2024-04-26 12:09:10,726 | INFO     | job 6177444223 has completed (purged errors)
[2024-04-26 14:09:27] 2024-04-26 12:09:10,726 | INFO     | overall cleanup function is called
[2024-04-26 14:09:27] 2024-04-26 12:09:11,733 | INFO     | --- collectZombieJob: --- 10, [978161]
[2024-04-26 14:09:27] 2024-04-26 12:09:11,733 | INFO     | zombie collector waiting for pid 978161
[2024-04-26 14:09:27] 2024-04-26 12:09:11,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 14:09:27] 2024-04-26 12:09:12,738 | INFO     | collected zombie processes
[2024-04-26 14:09:27] 2024-04-26 12:09:12,738 | INFO     | will now attempt to kill all subprocesses of pid=978161
[2024-04-26 14:09:27] 2024-04-26 12:09:12,984 | INFO     | process IDs to be killed: [978161] (in reverse order)
[2024-04-26 14:09:27] 2024-04-26 12:09:13,201 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 14:09:27] 2024-04-26 12:09:13,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 14:09:27] 2024-04-26 12:09:13,219 | INFO     | did not find any defunct processes belonging to 978161
[2024-04-26 14:09:27] 2024-04-26 12:09:13,233 | INFO     | did not find any defunct processes belonging to 978161
[2024-04-26 14:09:27] 2024-04-26 12:09:13,234 | INFO     | ready for new job
[2024-04-26 14:09:27] 2024-04-26 12:09:13,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 14:09:27] 2024-04-26 12:09:13,236 | INFO     | *************************************
[2024-04-26 14:09:27] 2024-04-26 12:09:13,236 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 14:09:27] 2024-04-26 12:09:13,236 | INFO     | *************************************
[2024-04-26 14:09:27] 2024-04-26 12:09:13,236 | INFO     | 
[2024-04-26 14:09:27] 2024-04-26 12:09:13,243 | INFO     | architecture information:
[2024-04-26 14:09:27] 2024-04-26 12:09:13,243 | INFO     | executing command: cat /etc/os-release
[2024-04-26 14:09:27] 2024-04-26 12:09:13,260 | INFO     | cat /etc/os-release:
[2024-04-26 14:09:27] NAME="CentOS Linux"
[2024-04-26 14:09:27] VERSION="7 (Core)"
[2024-04-26 14:09:27] ID="centos"
[2024-04-26 14:09:27] ID_LIKE="rhel fedora"
[2024-04-26 14:09:27] VERSION_ID="7"
[2024-04-26 14:09:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 14:09:27] ANSI_COLOR="0;31"
[2024-04-26 14:09:27] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 14:09:27] HOME_URL="https://www.centos.org/"
[2024-04-26 14:09:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 14:09:27] 
[2024-04-26 14:09:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 14:09:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 14:09:27] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 14:09:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 14:09:27] 
[2024-04-26 14:09:27] 2024-04-26 12:09:13,260 | INFO     | *************************************
[2024-04-26 14:09:27] 2024-04-26 12:09:13,763 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2024-04-26 14:09:27] 2024-04-26 12:09:13,786 | INFO     | sufficient remaining disk space (3057391763456 B)
[2024-04-26 14:09:27] 2024-04-26 12:09:13,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 14:09:27] 2024-04-26 12:09:13,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 14:09:27] 2024-04-26 12:09:13,786 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 14:09:27] 2024-04-26 12:09:13,787 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 14:09:27] 2024-04-26 12:09:13,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 14:09:27] 2024-04-26 12:09:13,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 14:09:27] 2024-04-26 12:09:13,969 | INFO     | all data control threads have been joined
[2024-04-26 14:09:27] 2024-04-26 12:09:13,983 | INFO     | all job control threads have been joined
[2024-04-26 14:09:27] 2024-04-26 12:09:14,478 | INFO     | all payload control threads have been joined
[2024-04-26 14:09:27] 2024-04-26 12:09:14,677 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 14:09:27] 2024-04-26 12:09:14,678 | INFO     | aborting loop
[2024-04-26 14:09:27] 2024-04-26 12:09:14,791 | INFO     | [job] retrieve thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:14,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 14:09:27] 2024-04-26 12:09:14,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 14:09:27] 2024-04-26 12:09:14,974 | INFO     | [data] control thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:14,988 | INFO     | [job] control thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,007 | INFO     | [job] validate thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,483 | INFO     | [payload] control thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,634 | INFO     | [data] copytool_in thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,635 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,682 | INFO     | [job] job monitor thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 14:09:27] 2024-04-26 12:09:15,726 | INFO     | [payload] validate_post thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,731 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,890 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:15,923 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:16,326 | INFO     | [payload] failed_post thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:16,715 | INFO     | [job] queue monitor thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:16,862 | INFO     | [data] copytool_out thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:18,935 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 14:09:27] 2024-04-26 12:09:20,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47523892540480)>', '<ExcThread(monitor, started 47524072179456)>']
[2024-04-26 14:09:27] 2024-04-26 12:09:21,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 14:09:27] 2024-04-26 12:09:21,827 | INFO     | [monitor] control thread has ended
[2024-04-26 14:09:27] 2024-04-26 12:09:26,014 | INFO     | all workflow threads have been joined
[2024-04-26 14:09:27] 2024-04-26 12:09:26,015 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 14:09:27] 2024-04-26 12:09:26,015 | INFO     | traces error code: 0
[2024-04-26 14:09:27] 2024-04-26 12:09:26,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 14:09:27] 2024-04-26 12:09:26,102 [wrapper] ==== pilot stdout END ====
[2024-04-26 14:09:27] 2024-04-26 12:09:26,105 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 14:09:27] 2024-04-26 12:09:26,109 [wrapper] pilotpid: 968776
[2024-04-26 14:09:27] 2024-04-26 12:09:26,111 [wrapper] Pilot exit status: 0
[2024-04-26 14:09:27] 2024-04-26 12:09:26,119 [wrapper] pandaids: 6177444223
[2024-04-26 14:09:27] 2024-04-26 12:09:26,244 [wrapper] cleanup: SIGTERM to supervisor_pilot 2222010 968777
[2024-04-26 14:09:27] 2024-04-26 12:09:26,275 [wrapper] Test setup, not cleaning
[2024-04-26 14:09:27] 2024-04-26 12:09:26,277 [wrapper] ==== wrapper stdout END ====
[2024-04-26 14:09:27] 2024-04-26 12:09:26,279 [wrapper] ==== wrapper stderr END ====
[2024-04-26 14:09:27] 2024-04-26 12:09:26,296 [wrapper] apfmon messages muted
[2024-04-26 14:09:27]  *** Error codes and diagnostics ***
[2024-04-26 14:09:27]     "exeErrorCode": 0,
[2024-04-26 14:09:27]     "exeErrorDiag": "",
[2024-04-26 14:09:27]     "pilotErrorCode": 0,
[2024-04-26 14:09:27]     "pilotErrorDiag": "",
[2024-04-26 14:09:27]  *** Listing of results directory ***
[2024-04-26 14:09:27] total 732576
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc      6185 Apr 16 08:15 queuedata.json
[2024-04-26 14:09:27] -rwx------ 1 boinc boinc     32123 Apr 16 08:19 runpilot2-wrapper.sh
[2024-04-26 14:09:27] -rw------- 1 boinc boinc    468593 Apr 16 08:19 pilot3.tar.gz
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc       100 Apr 26 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 14:09:27] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 10:40 run_atlas
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc       105 Apr 26 10:40 job.xml
[2024-04-26 14:09:27] -rw-r--r-- 2 boinc boinc 525730535 Apr 26 10:41 EVNT.38106843._000609.pool.root.1
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc      6646 Apr 26 10:41 init_data.xml
[2024-04-26 14:09:27] -rw-r--r-- 2 boinc boinc     17537 Apr 26 10:41 start_atlas.sh
[2024-04-26 14:09:27] drwxrwx--x 2 boinc boinc      4096 Apr 26 10:41 shared
[2024-04-26 14:09:27] -rw-r--r-- 2 boinc boinc    481331 Apr 26 10:41 input.tar.gz
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc         0 Apr 26 10:41 boinc_lockfile
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc      2549 Apr 26 10:41 pandaJob.out
[2024-04-26 14:09:27] -rw------- 1 boinc boinc       424 Apr 26 10:41 setup.sh.local
[2024-04-26 14:09:27] -rw------- 1 boinc boinc    993607 Apr 26 10:41 agis_schedconf.cvmfs.json
[2024-04-26 14:09:27] -rw------- 1 boinc boinc   1315307 Apr 26 10:41 cric_ddmendpoints.json
[2024-04-26 14:09:27] drwx------ 6 boinc boinc      4096 Apr 26 10:41 pilot3
[2024-04-26 14:09:27] -rw------- 1 boinc boinc 217989949 Apr 26 14:08 HITS.38106845._016321.pool.root.1
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc       531 Apr 26 14:08 boinc_task_state.xml
[2024-04-26 14:09:27] -rw------- 1 boinc boinc        95 Apr 26 14:08 pilot_heartbeat.json
[2024-04-26 14:09:27] -rw------- 1 boinc boinc      1045 Apr 26 14:08 memory_monitor_summary.json
[2024-04-26 14:09:27] -rw------- 1 boinc boinc         0 Apr 26 14:09 agis_ddmendpoints.agis.ALL.json
[2024-04-26 14:09:27] -rw------- 1 boinc boinc    304769 Apr 26 14:09 log.38106845._016321.job.log.tgz.1
[2024-04-26 14:09:27] -rw------- 1 boinc boinc      7698 Apr 26 14:09 heartbeat.json
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc        28 Apr 26 14:09 wrapper_checkpoint.txt
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc      8192 Apr 26 14:09 boinc_mmap_file
[2024-04-26 14:09:27] -rw------- 1 boinc boinc      4346 Apr 26 14:09 pilotlog.txt
[2024-04-26 14:09:27] -rw------- 1 boinc boinc   1161681 Apr 26 14:09 log.38106845._016321.job.log.1
[2024-04-26 14:09:27] -rw------- 1 boinc boinc       357 Apr 26 14:09 output.list
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc       620 Apr 26 14:09 runtime_log
[2024-04-26 14:09:27] -rw------- 1 boinc boinc   1484800 Apr 26 14:09 result.tar.gz
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc     11429 Apr 26 14:09 runtime_log.err
[2024-04-26 14:09:27] -rw------- 1 boinc boinc       657 Apr 26 14:09 ieCODmnLrG5n9Rq4apoT9bVoABFKDmABFKDmtztZDm6mFKDmV0Q0nm.diag
[2024-04-26 14:09:27] -rw-r--r-- 1 boinc boinc     21020 Apr 26 14:09 stderr.txt
[2024-04-26 14:09:27] HITS file was successfully produced:
[2024-04-26 14:09:27] -rw------- 1 boinc boinc 217989949 Apr 26 14:08 shared/HITS.pool.root.1
[2024-04-26 14:09:27]  *** Contents of shared directory: ***
[2024-04-26 14:09:27] total 728248
[2024-04-26 14:09:27] -rw-r--r-- 2 boinc boinc 525730535 Apr 26 10:41 ATLAS.root_0
[2024-04-26 14:09:27] -rw-r--r-- 2 boinc boinc     17537 Apr 26 10:41 start_atlas.sh
[2024-04-26 14:09:27] -rw-r--r-- 2 boinc boinc    481331 Apr 26 10:41 input.tar.gz
[2024-04-26 14:09:27] -rw------- 1 boinc boinc 217989949 Apr 26 14:08 HITS.pool.root.1
[2024-04-26 14:09:27] -rw------- 1 boinc boinc   1484800 Apr 26 14:09 result.tar.gz
14:09:28 (964768): run_atlas exited; CPU time 46505.888531
14:09:28 (964768): called boinc_finish(0)

</stderr_txt>
]]>

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