Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
10:53:02 (1903577): wrapper (7.7.26015): starting
10:53:02 (1903577): wrapper: running run_atlas (--nthreads 12)
[2024-04-27 10:53:02] Arguments: --nthreads 12
[2024-04-27 10:53:02] Threads: 12
[2024-04-27 10:53:02] Checking for CVMFS
[2024-04-27 10:53:03] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-27 10:53:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-27 10:53:03] Running cvmfs_config stat atlas.cern.ch
[2024-04-27 10:53:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-27 10:53:04] 2.11.2.0 1768874 26 46028 132102 1 189 2835799 4194304 823 130560 0 105760 94.053 840614 15093 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-04-27 10:53:04] CVMFS is ok
[2024-04-27 10:53:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 10:53:04] Checking for apptainer binary...
[2024-04-27 10:53:04] apptainer is not installed, using version from CVMFS
[2024-04-27 10:53:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 10:53:04] Trebeth
[2024-04-27 10:53:04] apptainer works
[2024-04-27 10:53:04] Set ATHENA_PROC_NUMBER=12
[2024-04-27 10:53:04] Set ATHENA_CORE_NUMBER=12
[2024-04-27 10:53:04] Starting ATLAS job with PandaID=6185012245
[2024-04-27 10:53:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 12:13:31]  *** The last 200 lines of the pilot log: ***
[2024-04-27 12:13:31]  allow_lan=True
[2024-04-27 12:13:31]  allow_wan=False
[2024-04-27 12:13:31]  checkinputsize=True
[2024-04-27 12:13:31]  checksum={'adler32': 'e0ee89e0'}
[2024-04-27 12:13:31]  dataset=mc23_13p6TeV.603414.PhPy8EG_NNPDF23_A14_ggH125_NNLOPS_tautauh30h20.simul.log.e8559_e8528_s4162_tid38204263_00
[2024-04-27 12:13:31]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 12:13:31]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 12:13:31]  direct_access_lan=False
[2024-04-27 12:13:31]  direct_access_wan=False
[2024-04-27 12:13:31]  domain=
[2024-04-27 12:13:31]  filesize=375871
[2024-04-27 12:13:31]  filetype=log
[2024-04-27 12:13:31]  guid=7b2b074d-40bf-45c8-a78c-a5776984db0d
[2024-04-27 12:13:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 12:13:31]  is_tar=False
[2024-04-27 12:13:31]  lfn=log.38204263._005420.job.log.tgz.1
[2024-04-27 12:13:31]  mtime=0
[2024-04-27 12:13:31]  protocol_id=None
[2024-04-27 12:13:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 12:13:31]  replicas=None
[2024-04-27 12:13:31]  scope=mc23_13p6TeV
[2024-04-27 12:13:31]  status=None
[2024-04-27 12:13:31]  status_code=0
[2024-04-27 12:13:31]  storage_token=
[2024-04-27 12:13:31]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6185012245/log.38204263._005420.job.log.tgz.1
[2024-04-27 12:13:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/94/log.38204263._005420.job.log.tgz.1
[2024-04-27 12:13:31]  workdir=None
[2024-04-27 12:13:31] ]
[2024-04-27 12:13:31] 2024-04-27 16:13:09,897 | INFO     | transferring file log.38204263._005420.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6185012245/log.38204263._005420.job.log.tgz.1 to /var/lib/boinc
[2024-04-27 12:13:31] 2024-04-27 16:13:09,898 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6185012245/log.38204263._005420.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.382042
[2024-04-27 12:13:31] 2024-04-27 16:13:09,909 | INFO     | adding to output.list: log.38204263._005420.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/94/log.38204263._005420.job.log.tg
[2024-04-27 12:13:31] 2024-04-27 16:13:09,910 | INFO     | summary of transferred files:
[2024-04-27 12:13:31] 2024-04-27 16:13:09,910 | INFO     |  -- lfn=log.38204263._005420.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 12:13:31] 2024-04-27 16:13:09,911 | INFO     | stage-out finished correctly
[2024-04-27 12:13:31] 2024-04-27 16:13:11,503 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 12:13:31] 2024-04-27 16:13:11,999 | WARNING  | process 1916403 is no longer using CPU - aborting
[2024-04-27 12:13:31] 2024-04-27 16:13:12,000 | INFO     | will not send any job update
[2024-04-27 12:13:31] 2024-04-27 16:13:13,915 | INFO     | job 6185012245 has state=finished
[2024-04-27 12:13:31] 2024-04-27 16:13:13,915 | INFO     | preparing for final server update for job 6185012245 in state='finished'
[2024-04-27 12:13:31] 2024-04-27 16:13:13,915 | INFO     | this job has now completed (state=finished)
[2024-04-27 12:13:31] 2024-04-27 16:13:13,915 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 12:13:31] 2024-04-27 16:13:13,916 | INFO     | job 6185012245 has finished - writing final server update
[2024-04-27 12:13:31] 2024-04-27 16:13:13,916 | INFO     | total number of processed events: 400 (read)
[2024-04-27 12:13:31] 2024-04-27 16:13:13,939 | INFO     | executing command: lscpu
[2024-04-27 12:13:31] 2024-04-27 16:13:13,989 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2024-04-27 12:13:31] 2024-04-27 16:13:13,990 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 12:13:31] 2024-04-27 16:13:14,021 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 12:13:31] 2024-04-27 16:13:14,503 | INFO     | monitor loop #376: job 0:6185012245 is in state 'finished'
[2024-04-27 12:13:31] 2024-04-27 16:13:14,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 12:13:31] 2024-04-27 16:13:17,006 | INFO     | monitor loop #377: job 0:6185012245 is in state 'finished'
[2024-04-27 12:13:31] 2024-04-27 16:13:17,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 12:13:31] 2024-04-27 16:13:18,244 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 12:13:31] 2024-04-27 16:13:18,245 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6185012245/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 12:13:31] 2024-04-27 16:13:18,246 | INFO     | extracted standard info from prmon json
[2024-04-27 12:13:31] 2024-04-27 16:13:18,246 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 12:13:31] 2024-04-27 16:13:18,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 12:13:31] 2024-04-27 16:13:18,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 12:13:31] 2024-04-27 16:13:18,247 | INFO     | fitting pss+swap vs Time
[2024-04-27 12:13:31] 2024-04-27 16:13:18,248 | INFO     | current memory leak: -4.04 B/s (using 72 data points, chi2=0.14)
[2024-04-27 12:13:31] 2024-04-27 16:13:18,248 | INFO     | ..............................
[2024-04-27 12:13:31] 2024-04-27 16:13:18,248 | INFO     | . Timing measurements:
[2024-04-27 12:13:31] 2024-04-27 16:13:18,248 | INFO     | . get job = 0 s
[2024-04-27 12:13:31] 2024-04-27 16:13:18,248 | INFO     | . initial setup = 2 s
[2024-04-27 12:13:31] 2024-04-27 16:13:18,248 | INFO     | . payload setup = 4 s
[2024-04-27 12:13:31] 2024-04-27 16:13:18,248 | INFO     | . stage-in = 0 s
[2024-04-27 12:13:31] 2024-04-27 16:13:18,249 | INFO     | . payload execution = 4770 s
[2024-04-27 12:13:31] 2024-04-27 16:13:18,249 | INFO     | . stage-out = 0 s
[2024-04-27 12:13:31] 2024-04-27 16:13:18,249 | INFO     | . log creation = 0 s
[2024-04-27 12:13:31] 2024-04-27 16:13:18,249 | INFO     | ..............................
[2024-04-27 12:13:31] 2024-04-27 16:13:18,328 | INFO     | 
[2024-04-27 12:13:31] 2024-04-27 16:13:18,328 | INFO     | job summary report
[2024-04-27 12:13:31] 2024-04-27 16:13:18,328 | INFO     | --------------------------------------------------
[2024-04-27 12:13:31] 2024-04-27 16:13:18,328 | INFO     | PanDA job id: 6185012245
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | task id: 38204263
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | errors: (none)
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | pilot state: finished 
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | transexitcode: 0
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | exeerrorcode: 0
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | exeerrordiag: 
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | exitcode: 0
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | exitmsg: OK
[2024-04-27 12:13:31] 2024-04-27 16:13:18,329 | INFO     | cpuconsumptiontime: 41469 s
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | nevents: 400
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | neventsw: 0
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | pid: 1916403
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | pgrp: 1916403
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | corecount: 12
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | event service: False
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | sizes: {0: 2375542, 1: 2375741, 4: 2375947, 11: 2375975, 4778: 2402175, 4779: 2411332, 4781: 2411332, 4788: 2411502}
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | --------------------------------------------------
[2024-04-27 12:13:31] 2024-04-27 16:13:18,330 | INFO     | 
[2024-04-27 12:13:31] 2024-04-27 16:13:18,331 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2024-04-27 12:13:31] 2024-04-27 16:13:18,348 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,350 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 12:13:31] 2024-04-27 16:13:18,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,350 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 12:13:31] 2024-04-27 16:13:18,350 | INFO     | job 6185012245 has completed (purged errors)
[2024-04-27 12:13:31] 2024-04-27 16:13:18,350 | INFO     | overall cleanup function is called
[2024-04-27 12:13:31] 2024-04-27 16:13:19,354 | INFO     | --- collectZombieJob: --- 10, [1916403]
[2024-04-27 12:13:31] 2024-04-27 16:13:19,355 | INFO     | zombie collector waiting for pid 1916403
[2024-04-27 12:13:31] 2024-04-27 16:13:19,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 12:13:31] 2024-04-27 16:13:20,358 | INFO     | collected zombie processes
[2024-04-27 12:13:31] 2024-04-27 16:13:20,359 | INFO     | will now attempt to kill all subprocesses of pid=1916403
[2024-04-27 12:13:31] 2024-04-27 16:13:20,469 | INFO     | process IDs to be killed: [1916403] (in reverse order)
[2024-04-27 12:13:31] 2024-04-27 16:13:20,549 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 12:13:31] 2024-04-27 16:13:20,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 12:13:31] 2024-04-27 16:13:20,556 | INFO     | did not find any defunct processes belonging to 1916403
[2024-04-27 12:13:31] 2024-04-27 16:13:20,560 | INFO     | did not find any defunct processes belonging to 1916403
[2024-04-27 12:13:31] 2024-04-27 16:13:20,560 | INFO     | ready for new job
[2024-04-27 12:13:31] 2024-04-27 16:13:20,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 12:13:31] 2024-04-27 16:13:20,562 | INFO     | *************************************
[2024-04-27 12:13:31] 2024-04-27 16:13:20,562 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 12:13:31] 2024-04-27 16:13:20,562 | INFO     | *************************************
[2024-04-27 12:13:31] 2024-04-27 16:13:20,562 | INFO     | 
[2024-04-27 12:13:31] 2024-04-27 16:13:20,585 | INFO     | architecture information:
[2024-04-27 12:13:31] 2024-04-27 16:13:20,586 | INFO     | executing command: cat /etc/os-release
[2024-04-27 12:13:31] 2024-04-27 16:13:20,598 | INFO     | cat /etc/os-release:
[2024-04-27 12:13:31] NAME="CentOS Linux"
[2024-04-27 12:13:31] VERSION="7 (Core)"
[2024-04-27 12:13:31] ID="centos"
[2024-04-27 12:13:31] ID_LIKE="rhel fedora"
[2024-04-27 12:13:31] VERSION_ID="7"
[2024-04-27 12:13:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 12:13:31] ANSI_COLOR="0;31"
[2024-04-27 12:13:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 12:13:31] HOME_URL="https://www.centos.org/"
[2024-04-27 12:13:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 12:13:31] 
[2024-04-27 12:13:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 12:13:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 12:13:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 12:13:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 12:13:31] 
[2024-04-27 12:13:31] 2024-04-27 16:13:20,599 | INFO     | *************************************
[2024-04-27 12:13:31] 2024-04-27 16:13:21,102 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2024-04-27 12:13:31] 2024-04-27 16:13:21,118 | INFO     | sufficient remaining disk space (390307250176 B)
[2024-04-27 12:13:31] 2024-04-27 16:13:21,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 12:13:31] 2024-04-27 16:13:21,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 12:13:31] 2024-04-27 16:13:21,119 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 12:13:31] 2024-04-27 16:13:21,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 12:13:31] 2024-04-27 16:13:21,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 12:13:31] 2024-04-27 16:13:21,119 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 12:13:31] 2024-04-27 16:13:21,119 | INFO     | aborting loop
[2024-04-27 12:13:31] 2024-04-27 16:13:21,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 12:13:31] 2024-04-27 16:13:21,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 12:13:31] 2024-04-27 16:13:21,798 | INFO     | all job control threads have been joined
[2024-04-27 12:13:31] 2024-04-27 16:13:22,002 | INFO     | all payload control threads have been joined
[2024-04-27 12:13:31] 2024-04-27 16:13:22,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 12:13:31] 2024-04-27 16:13:22,123 | INFO     | [job] job monitor thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:22,123 | INFO     | [job] retrieve thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:22,179 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:22,198 | INFO     | all data control threads have been joined
[2024-04-27 12:13:31] 2024-04-27 16:13:22,243 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:22,322 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:22,395 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:22,802 | INFO     | [job] control thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:22,918 | INFO     | [data] copytool_in thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:23,006 | INFO     | [payload] control thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:23,051 | INFO     | [payload] validate_post thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:23,122 | INFO     | [data] copytool_out thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:23,202 | INFO     | [data] control thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:23,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 12:13:31] 2024-04-27 16:13:23,410 | INFO     | [job] validate thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:23,626 | INFO     | [payload] failed_post thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:24,338 | INFO     | [job] queue monitor thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:26,106 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 12:13:31] 2024-04-27 16:13:26,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364651276096)>', '<ExcThread(monitor, started 140364448237312)>']
[2024-04-27 12:13:31] 2024-04-27 16:13:27,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 12:13:31] 2024-04-27 16:13:27,143 | INFO     | [monitor] control thread has ended
[2024-04-27 12:13:31] 2024-04-27 16:13:31,778 | INFO     | all workflow threads have been joined
[2024-04-27 12:13:31] 2024-04-27 16:13:31,779 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 12:13:31] 2024-04-27 16:13:31,779 | INFO     | traces error code: 0
[2024-04-27 12:13:31] 2024-04-27 16:13:31,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 12:13:31] 2024-04-27 16:13:31,854 [wrapper] ==== pilot stdout END ====
[2024-04-27 12:13:31] 2024-04-27 16:13:31,856 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 12:13:31] 2024-04-27 16:13:31,858 [wrapper] pilotpid: 1908753
[2024-04-27 12:13:31] 2024-04-27 16:13:31,860 [wrapper] Pilot exit status: 0
[2024-04-27 12:13:31] 2024-04-27 16:13:31,868 [wrapper] pandaids: 6185012245
[2024-04-27 12:13:31] 2024-04-27 16:13:31,916 [wrapper] cleanup: SIGTERM to supervisor_pilot 2157662 1908754
[2024-04-27 12:13:31] 2024-04-27 16:13:31,918 [wrapper] Test setup, not cleaning
[2024-04-27 12:13:31] 2024-04-27 16:13:31,919 [wrapper] ==== wrapper stdout END ====
[2024-04-27 12:13:31] 2024-04-27 16:13:31,921 [wrapper] ==== wrapper stderr END ====
[2024-04-27 12:13:31] 2024-04-27 16:13:31,925 [wrapper] apfmon messages muted
[2024-04-27 12:13:31]  *** Error codes and diagnostics ***
[2024-04-27 12:13:31]     "exeErrorCode": 0,
[2024-04-27 12:13:31]     "exeErrorDiag": "",
[2024-04-27 12:13:31]     "pilotErrorCode": 0,
[2024-04-27 12:13:31]     "pilotErrorDiag": "",
[2024-04-27 12:13:31]  *** Listing of results directory ***
[2024-04-27 12:13:31] total 695900
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc    462745 Apr 24 07:03 pilot3.tar.gz
[2024-04-27 12:13:31] -rwx------ 1 boinc boinc     32211 Apr 24 07:17 runpilot2-wrapper.sh
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc      6720 Apr 24 07:17 queuedata.json
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc       100 Apr 27 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 12:13:31] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 10:53 run_atlas
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc       105 Apr 27 10:53 job.xml
[2024-04-27 12:13:31] -rw-r--r-- 2 boinc boinc     17537 Apr 27 10:53 start_atlas.sh
[2024-04-27 12:13:31] drwxrwx--x 2 boinc boinc      4096 Apr 27 10:53 shared
[2024-04-27 12:13:31] -rw-r--r-- 2 boinc boinc    474820 Apr 27 10:53 input.tar.gz
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc      7598 Apr 27 10:53 init_data.xml
[2024-04-27 12:13:31] -rw-r--r-- 2 boinc boinc 518829597 Apr 27 10:53 EVNT.38204261._000205.pool.root.1
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc         0 Apr 27 10:53 boinc_lockfile
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc      2650 Apr 27 10:53 pandaJob.out
[2024-04-27 12:13:31] -rw------- 1 boinc boinc       460 Apr 27 10:53 setup.sh.local
[2024-04-27 12:13:31] -rw------- 1 boinc boinc    997146 Apr 27 10:53 agis_schedconf.cvmfs.json
[2024-04-27 12:13:31] -rw------- 1 boinc boinc         0 Apr 27 10:53 agis_ddmendpoints.agis.ALL.json
[2024-04-27 12:13:31] -rw------- 1 boinc boinc   1315307 Apr 27 10:53 cric_ddmendpoints.json
[2024-04-27 12:13:31] drwx------ 4 boinc boinc      4096 Apr 27 10:53 pilot3
[2024-04-27 12:13:31] -rw------- 1 boinc boinc        95 Apr 27 12:12 pilot_heartbeat.json
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc       530 Apr 27 12:12 boinc_task_state.xml
[2024-04-27 12:13:31] -rw------- 1 boinc boinc 188560829 Apr 27 12:12 HITS.38204263._005420.pool.root.1
[2024-04-27 12:13:31] -rw------- 1 boinc boinc      1029 Apr 27 12:13 memory_monitor_summary.json
[2024-04-27 12:13:31] -rw------- 1 boinc boinc    375871 Apr 27 12:13 log.38204263._005420.job.log.tgz.1
[2024-04-27 12:13:31] -rw------- 1 boinc boinc      7662 Apr 27 12:13 heartbeat.json
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc        27 Apr 27 12:13 wrapper_checkpoint.txt
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc      8192 Apr 27 12:13 boinc_mmap_file
[2024-04-27 12:13:31] -rw------- 1 boinc boinc      4342 Apr 27 12:13 pilotlog.txt
[2024-04-27 12:13:31] -rw------- 1 boinc boinc    484972 Apr 27 12:13 log.38204263._005420.job.log.1
[2024-04-27 12:13:31] -rw------- 1 boinc boinc       357 Apr 27 12:13 output.list
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc       620 Apr 27 12:13 runtime_log
[2024-04-27 12:13:31] -rw------- 1 boinc boinc    880640 Apr 27 12:13 result.tar.gz
[2024-04-27 12:13:31] -rw------- 1 boinc boinc       639 Apr 27 12:13 PnSNDm4npJ5n7Olcko1bjSoqABFKDmABFKDmOtvXDm50FKDmnFkmMm.diag
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc     11459 Apr 27 12:13 runtime_log.err
[2024-04-27 12:13:31] -rw-r--r-- 1 boinc boinc     20578 Apr 27 12:13 stderr.txt
[2024-04-27 12:13:31] HITS file was successfully produced:
[2024-04-27 12:13:31] -rw------- 1 boinc boinc 188560829 Apr 27 12:12 shared/HITS.pool.root.1
[2024-04-27 12:13:31]  *** Contents of shared directory: ***
[2024-04-27 12:13:31] total 692168
[2024-04-27 12:13:31] -rw-r--r-- 2 boinc boinc     17537 Apr 27 10:53 start_atlas.sh
[2024-04-27 12:13:31] -rw-r--r-- 2 boinc boinc    474820 Apr 27 10:53 input.tar.gz
[2024-04-27 12:13:31] -rw-r--r-- 2 boinc boinc 518829597 Apr 27 10:53 ATLAS.root_0
[2024-04-27 12:13:31] -rw------- 1 boinc boinc 188560829 Apr 27 12:12 HITS.pool.root.1
[2024-04-27 12:13:31] -rw------- 1 boinc boinc    880640 Apr 27 12:13 result.tar.gz
12:13:33 (1903577): run_atlas exited; CPU time 41316.098333
12:13:33 (1903577): called boinc_finish(0)

</stderr_txt>
]]>

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