Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
12:14:48 (2190730): wrapper (7.7.26015): starting
12:14:48 (2190730): wrapper: running run_atlas (--nthreads 12)
[2024-04-27 12:14:48] Arguments: --nthreads 12
[2024-04-27 12:14:48] Threads: 12
[2024-04-27 12:14:48] Checking for CVMFS
[2024-04-27 12:14:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-27 12:14:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-27 12:14:48] Running cvmfs_config stat atlas.cern.ch
[2024-04-27 12:14:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-27 12:14:48] 2.11.2.0 1768874 108 48620 132104 3 188 2979206 4194305 662 130560 0 327408 98.035 880178 14979 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-04-27 12:14:48] CVMFS is ok
[2024-04-27 12:14:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 12:14:48] Checking for apptainer binary...
[2024-04-27 12:14:48] apptainer is not installed, using version from CVMFS
[2024-04-27 12:14:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 12:14:48] Trebeth
[2024-04-27 12:14:48] apptainer works
[2024-04-27 12:14:48] Set ATHENA_PROC_NUMBER=12
[2024-04-27 12:14:48] Set ATHENA_CORE_NUMBER=12
[2024-04-27 12:14:48] Starting ATLAS job with PandaID=6185012236
[2024-04-27 12:14:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 13:29:10]  *** The last 200 lines of the pilot log: ***
[2024-04-27 13:29:10] 2024-04-27 17:28:50,064 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2024-04-27 13:29:10] 2024-04-27 17:28:50,065 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-04-27 13:29:10]  activity=['pl', 'pw', 'w', 'default']
[2024-04-27 13:29:10]  allow_lan=True
[2024-04-27 13:29:10]  allow_wan=False
[2024-04-27 13:29:10]  checkinputsize=True
[2024-04-27 13:29:10]  checksum={'adler32': '0fcf4f7c'}
[2024-04-27 13:29:10]  dataset=mc23_13p6TeV.603414.PhPy8EG_NNPDF23_A14_ggH125_NNLOPS_tautauh30h20.simul.log.e8559_e8528_s4162_tid38204263_00
[2024-04-27 13:29:10]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 13:29:10]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 13:29:10]  direct_access_lan=False
[2024-04-27 13:29:10]  direct_access_wan=False
[2024-04-27 13:29:10]  domain=
[2024-04-27 13:29:10]  filesize=365125
[2024-04-27 13:29:10]  filetype=log
[2024-04-27 13:29:10]  guid=1f283bc8-72d6-4eaf-8d70-2b18b81a7dd0
[2024-04-27 13:29:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 13:29:10]  is_tar=False
[2024-04-27 13:29:10]  lfn=log.38204263._005413.job.log.tgz.1
[2024-04-27 13:29:10]  mtime=0
[2024-04-27 13:29:10]  protocol_id=None
[2024-04-27 13:29:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 13:29:10]  replicas=None
[2024-04-27 13:29:10]  scope=mc23_13p6TeV
[2024-04-27 13:29:10]  status=None
[2024-04-27 13:29:10]  status_code=0
[2024-04-27 13:29:10]  storage_token=
[2024-04-27 13:29:10]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6185012236/log.38204263._005413.job.log.tgz.1
[2024-04-27 13:29:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/45/log.38204263._005413.job.log.tgz.1
[2024-04-27 13:29:10]  workdir=None
[2024-04-27 13:29:10] ]
[2024-04-27 13:29:10] 2024-04-27 17:28:50,100 | INFO     | transferring file log.38204263._005413.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6185012236/log.38204263._005413.job.log.tgz.1 to /var/lib/boinc
[2024-04-27 13:29:10] 2024-04-27 17:28:50,100 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6185012236/log.38204263._005413.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.382042
[2024-04-27 13:29:10] 2024-04-27 17:28:50,113 | INFO     | adding to output.list: log.38204263._005413.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/45/log.38204263._005413.job.log.tg
[2024-04-27 13:29:10] 2024-04-27 17:28:50,114 | INFO     | summary of transferred files:
[2024-04-27 13:29:10] 2024-04-27 17:28:50,114 | INFO     |  -- lfn=log.38204263._005413.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 13:29:10] 2024-04-27 17:28:50,114 | INFO     | stage-out finished correctly
[2024-04-27 13:29:10] 2024-04-27 17:28:50,171 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 13:29:10] 2024-04-27 17:28:51,775 | INFO     | job 6185012236 has state=finished
[2024-04-27 13:29:10] 2024-04-27 17:28:51,775 | INFO     | preparing for final server update for job 6185012236 in state='finished'
[2024-04-27 13:29:10] 2024-04-27 17:28:51,775 | INFO     | this job has now completed (state=finished)
[2024-04-27 13:29:10] 2024-04-27 17:28:51,776 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 13:29:10] 2024-04-27 17:28:51,776 | INFO     | job 6185012236 has finished - writing final server update
[2024-04-27 13:29:10] 2024-04-27 17:28:51,776 | INFO     | total number of processed events: 400 (read)
[2024-04-27 13:29:10] 2024-04-27 17:28:51,798 | INFO     | executing command: lscpu
[2024-04-27 13:29:10] 2024-04-27 17:28:51,854 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2024-04-27 13:29:10] 2024-04-27 17:28:51,854 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 13:29:10] 2024-04-27 17:28:51,904 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 13:29:10] 2024-04-27 17:28:54,753 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 13:29:10] 2024-04-27 17:28:54,753 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6185012236/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 13:29:10] 2024-04-27 17:28:54,754 | INFO     | extracted standard info from prmon json
[2024-04-27 13:29:10] 2024-04-27 17:28:54,755 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 13:29:10] 2024-04-27 17:28:54,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 13:29:10] 2024-04-27 17:28:54,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 13:29:10] 2024-04-27 17:28:54,757 | INFO     | fitting pss+swap vs Time
[2024-04-27 13:29:10] 2024-04-27 17:28:54,757 | INFO     | current memory leak: 50.43 B/s (using 66 data points, chi2=0.22)
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | ..............................
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | . Timing measurements:
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | . get job = 0 s
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | . initial setup = 1 s
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | . payload setup = 4 s
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | . stage-in = 0 s
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | . payload execution = 4410 s
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | . stage-out = 0 s
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | . log creation = 0 s
[2024-04-27 13:29:10] 2024-04-27 17:28:54,758 | INFO     | ..............................
[2024-04-27 13:29:10] 2024-04-27 17:28:54,840 | INFO     | 
[2024-04-27 13:29:10] 2024-04-27 17:28:54,840 | INFO     | job summary report
[2024-04-27 13:29:10] 2024-04-27 17:28:54,840 | INFO     | --------------------------------------------------
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | PanDA job id: 6185012236
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | task id: 38204263
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | errors: (none)
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | pilot state: finished 
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | transexitcode: 0
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | exeerrorcode: 0
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | exeerrordiag: 
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | exitcode: 0
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | exitmsg: OK
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | cpuconsumptiontime: 42140 s
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | nevents: 400
[2024-04-27 13:29:10] 2024-04-27 17:28:54,841 | INFO     | neventsw: 0
[2024-04-27 13:29:10] 2024-04-27 17:28:54,842 | INFO     | pid: 2202721
[2024-04-27 13:29:10] 2024-04-27 17:28:54,842 | INFO     | pgrp: 2202721
[2024-04-27 13:29:10] 2024-04-27 17:28:54,842 | INFO     | corecount: 12
[2024-04-27 13:29:10] 2024-04-27 17:28:54,842 | INFO     | event service: False
[2024-04-27 13:29:10] 2024-04-27 17:28:54,842 | INFO     | sizes: {0: 2375492, 1: 2375691, 4: 2375897, 11: 2375925, 4418: 2401984, 4420: 2411142, 4424: 2411256}
[2024-04-27 13:29:10] 2024-04-27 17:28:54,842 | INFO     | --------------------------------------------------
[2024-04-27 13:29:10] 2024-04-27 17:28:54,842 | INFO     | 
[2024-04-27 13:29:10] 2024-04-27 17:28:54,842 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2024-04-27 13:29:10] 2024-04-27 17:28:54,858 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,858 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,858 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,858 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 13:29:10] 2024-04-27 17:28:54,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,860 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 13:29:10] 2024-04-27 17:28:54,860 | INFO     | job 6185012236 has completed (purged errors)
[2024-04-27 13:29:10] 2024-04-27 17:28:54,860 | INFO     | overall cleanup function is called
[2024-04-27 13:29:10] 2024-04-27 17:28:55,344 | WARNING  | process 2202721 is no longer using CPU - aborting
[2024-04-27 13:29:10] 2024-04-27 17:28:55,344 | INFO     | aborting job monitoring since job object (job id=6185012236) has expired
[2024-04-27 13:29:10] 2024-04-27 17:28:55,866 | INFO     | --- collectZombieJob: --- 10, [2202721]
[2024-04-27 13:29:10] 2024-04-27 17:28:55,867 | INFO     | zombie collector waiting for pid 2202721
[2024-04-27 13:29:10] 2024-04-27 17:28:55,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 13:29:10] 2024-04-27 17:28:56,871 | INFO     | collected zombie processes
[2024-04-27 13:29:10] 2024-04-27 17:28:56,871 | INFO     | will now attempt to kill all subprocesses of pid=2202721
[2024-04-27 13:29:10] 2024-04-27 17:28:56,968 | INFO     | process IDs to be killed: [2202721] (in reverse order)
[2024-04-27 13:29:10] 2024-04-27 17:28:57,051 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 13:29:10] 2024-04-27 17:28:57,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 13:29:10] 2024-04-27 17:28:57,058 | INFO     | did not find any defunct processes belonging to 2202721
[2024-04-27 13:29:10] 2024-04-27 17:28:57,062 | INFO     | did not find any defunct processes belonging to 2202721
[2024-04-27 13:29:10] 2024-04-27 17:28:57,062 | INFO     | ready for new job
[2024-04-27 13:29:10] 2024-04-27 17:28:57,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 13:29:10] 2024-04-27 17:28:57,063 | INFO     | *************************************
[2024-04-27 13:29:10] 2024-04-27 17:28:57,063 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 13:29:10] 2024-04-27 17:28:57,063 | INFO     | *************************************
[2024-04-27 13:29:10] 2024-04-27 17:28:57,063 | INFO     | 
[2024-04-27 13:29:10] 2024-04-27 17:28:57,089 | INFO     | architecture information:
[2024-04-27 13:29:10] 2024-04-27 17:28:57,090 | INFO     | executing command: cat /etc/os-release
[2024-04-27 13:29:10] 2024-04-27 17:28:57,103 | INFO     | cat /etc/os-release:
[2024-04-27 13:29:10] NAME="CentOS Linux"
[2024-04-27 13:29:10] VERSION="7 (Core)"
[2024-04-27 13:29:10] ID="centos"
[2024-04-27 13:29:10] ID_LIKE="rhel fedora"
[2024-04-27 13:29:10] VERSION_ID="7"
[2024-04-27 13:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 13:29:10] ANSI_COLOR="0;31"
[2024-04-27 13:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 13:29:10] HOME_URL="https://www.centos.org/"
[2024-04-27 13:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 13:29:10] 
[2024-04-27 13:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 13:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 13:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 13:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 13:29:10] 
[2024-04-27 13:29:10] 2024-04-27 17:28:57,104 | INFO     | *************************************
[2024-04-27 13:29:10] 2024-04-27 17:28:57,607 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2024-04-27 13:29:10] 2024-04-27 17:28:57,622 | INFO     | sufficient remaining disk space (390764429312 B)
[2024-04-27 13:29:10] 2024-04-27 17:28:57,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 13:29:10] 2024-04-27 17:28:57,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 13:29:10] 2024-04-27 17:28:57,847 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-27 13:29:10] 2024-04-27 17:28:57,847 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-27 13:29:10] 2024-04-27 17:28:57,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 13:29:10] 2024-04-27 17:28:57,848 | INFO     | will abort loop
[2024-04-27 13:29:10] 2024-04-27 17:28:57,957 | INFO     | all job control threads have been joined
[2024-04-27 13:29:10] 2024-04-27 17:28:58,054 | INFO     | all data control threads have been joined
[2024-04-27 13:29:10] 2024-04-27 17:28:58,110 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 13:29:10] 2024-04-27 17:28:58,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 13:29:10] 2024-04-27 17:28:58,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 13:29:10] 2024-04-27 17:28:58,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 13:29:10] 2024-04-27 17:28:58,570 | INFO     | all payload control threads have been joined
[2024-04-27 13:29:10] 2024-04-27 17:28:58,626 | INFO     | [job] retrieve thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:58,792 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:58,850 | INFO     | [job] job monitor thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:58,922 | INFO     | [job] validate thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:58,962 | INFO     | [job] control thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:59,058 | INFO     | [data] control thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:59,135 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:59,142 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:59,454 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:59,466 | INFO     | [payload] validate_post thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:59,574 | INFO     | [payload] control thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:59,582 | INFO     | [payload] failed_post thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:28:59,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 13:29:10] 2024-04-27 17:29:00,043 | INFO     | [data] copytool_in thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:29:00,182 | INFO     | [data] copytool_out thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:29:00,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 13:29:10] 2024-04-27 17:29:00,850 | INFO     | [job] queue monitor thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:29:04,766 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 13:29:10] 2024-04-27 17:29:04,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037251073856)>', '<ExcThread(monitor, started 140036334941952)>']
[2024-04-27 13:29:10] 2024-04-27 17:29:05,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 13:29:10] 2024-04-27 17:29:05,139 | INFO     | [monitor] control thread has ended
[2024-04-27 13:29:10] 2024-04-27 17:29:09,942 | INFO     | all workflow threads have been joined
[2024-04-27 13:29:10] 2024-04-27 17:29:09,943 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 13:29:10] 2024-04-27 17:29:09,943 | INFO     | traces error code: 0
[2024-04-27 13:29:10] 2024-04-27 17:29:09,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 13:29:10] 2024-04-27 17:29:10,001 [wrapper] ==== pilot stdout END ====
[2024-04-27 13:29:10] 2024-04-27 17:29:10,003 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 13:29:10] 2024-04-27 17:29:10,004 [wrapper] pilotpid: 2195368
[2024-04-27 13:29:10] 2024-04-27 17:29:10,006 [wrapper] Pilot exit status: 0
[2024-04-27 13:29:10] 2024-04-27 17:29:10,013 [wrapper] pandaids: 6185012236
[2024-04-27 13:29:10] 2024-04-27 17:29:10,044 [wrapper] cleanup: SIGTERM to supervisor_pilot 2313714 2195369
[2024-04-27 13:29:10] 2024-04-27 17:29:10,045 [wrapper] Test setup, not cleaning
[2024-04-27 13:29:10] 2024-04-27 17:29:10,047 [wrapper] ==== wrapper stdout END ====
[2024-04-27 13:29:10] 2024-04-27 17:29:10,048 [wrapper] ==== wrapper stderr END ====
[2024-04-27 13:29:10] 2024-04-27 17:29:10,052 [wrapper] apfmon messages muted
[2024-04-27 13:29:10]  *** Error codes and diagnostics ***
[2024-04-27 13:29:10]     "exeErrorCode": 0,
[2024-04-27 13:29:10]     "exeErrorDiag": "",
[2024-04-27 13:29:10]     "pilotErrorCode": 0,
[2024-04-27 13:29:10]     "pilotErrorDiag": "",
[2024-04-27 13:29:10]  *** Listing of results directory ***
[2024-04-27 13:29:10] total 703124
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc    462745 Apr 24 07:03 pilot3.tar.gz
[2024-04-27 13:29:10] -rwx------ 1 boinc boinc     32211 Apr 24 07:16 runpilot2-wrapper.sh
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc      6720 Apr 24 07:16 queuedata.json
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc       100 Apr 27 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 13:29:10] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 12:14 run_atlas
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc       105 Apr 27 12:14 job.xml
[2024-04-27 13:29:10] -rw-r--r-- 2 boinc boinc 518829597 Apr 27 12:14 EVNT.38204261._000205.pool.root.1
[2024-04-27 13:29:10] -rw-r--r-- 2 boinc boinc     17537 Apr 27 12:14 start_atlas.sh
[2024-04-27 13:29:10] drwxrwx--x 2 boinc boinc      4096 Apr 27 12:14 shared
[2024-04-27 13:29:10] -rw-r--r-- 2 boinc boinc    474819 Apr 27 12:14 input.tar.gz
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc      7598 Apr 27 12:14 init_data.xml
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc         0 Apr 27 12:14 boinc_lockfile
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc      2650 Apr 27 12:14 pandaJob.out
[2024-04-27 13:29:10] -rw------- 1 boinc boinc       460 Apr 27 12:14 setup.sh.local
[2024-04-27 13:29:10] -rw------- 1 boinc boinc    997146 Apr 27 12:14 agis_schedconf.cvmfs.json
[2024-04-27 13:29:10] -rw------- 1 boinc boinc         0 Apr 27 12:14 agis_ddmendpoints.agis.ALL.json
[2024-04-27 13:29:10] -rw------- 1 boinc boinc   1315307 Apr 27 12:14 cric_ddmendpoints.json
[2024-04-27 13:29:10] drwx------ 4 boinc boinc      4096 Apr 27 12:14 pilot3
[2024-04-27 13:29:10] -rw------- 1 boinc boinc        95 Apr 27 13:28 pilot_heartbeat.json
[2024-04-27 13:29:10] -rw------- 1 boinc boinc 196039258 Apr 27 13:28 HITS.38204263._005413.pool.root.1
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc       530 Apr 27 13:28 boinc_task_state.xml
[2024-04-27 13:29:10] -rw------- 1 boinc boinc      1030 Apr 27 13:28 memory_monitor_summary.json
[2024-04-27 13:29:10] -rw------- 1 boinc boinc    365125 Apr 27 13:28 log.38204263._005413.job.log.tgz.1
[2024-04-27 13:29:10] -rw------- 1 boinc boinc      7661 Apr 27 13:28 heartbeat.json
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc      8192 Apr 27 13:29 boinc_mmap_file
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc        27 Apr 27 13:29 wrapper_checkpoint.txt
[2024-04-27 13:29:10] -rw------- 1 boinc boinc      4405 Apr 27 13:29 pilotlog.txt
[2024-04-27 13:29:10] -rw------- 1 boinc boinc    453076 Apr 27 13:29 log.38204263._005413.job.log.1
[2024-04-27 13:29:10] -rw------- 1 boinc boinc       357 Apr 27 13:29 output.list
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc       620 Apr 27 13:29 runtime_log
[2024-04-27 13:29:10] -rw------- 1 boinc boinc    839680 Apr 27 13:29 result.tar.gz
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc     11459 Apr 27 13:29 runtime_log.err
[2024-04-27 13:29:10] -rw------- 1 boinc boinc       638 Apr 27 13:29 BjAODm4mpJ5nfZGDcpSWOuwoABFKDmABFKDmtxRSDmf3IKDmfroWtn.diag
[2024-04-27 13:29:10] -rw-r--r-- 1 boinc boinc     20573 Apr 27 13:29 stderr.txt
[2024-04-27 13:29:10] HITS file was successfully produced:
[2024-04-27 13:29:10] -rw------- 1 boinc boinc 196039258 Apr 27 13:28 shared/HITS.pool.root.1
[2024-04-27 13:29:10]  *** Contents of shared directory: ***
[2024-04-27 13:29:10] total 699432
[2024-04-27 13:29:10] -rw-r--r-- 2 boinc boinc 518829597 Apr 27 12:14 ATLAS.root_0
[2024-04-27 13:29:10] -rw-r--r-- 2 boinc boinc     17537 Apr 27 12:14 start_atlas.sh
[2024-04-27 13:29:10] -rw-r--r-- 2 boinc boinc    474819 Apr 27 12:14 input.tar.gz
[2024-04-27 13:29:10] -rw------- 1 boinc boinc 196039258 Apr 27 13:28 HITS.pool.root.1
[2024-04-27 13:29:10] -rw------- 1 boinc boinc    839680 Apr 27 13:29 result.tar.gz
13:29:11 (2190730): run_atlas exited; CPU time 42004.273982
13:29:11 (2190730): called boinc_finish(0)

</stderr_txt>
]]>

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