Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
16:52:05 (2830453): wrapper (7.7.26015): starting
16:52:05 (2830453): wrapper: running run_atlas (--nthreads 12)
[2024-04-27 16:52:05] Arguments: --nthreads 12
[2024-04-27 16:52:05] Threads: 12
[2024-04-27 16:52:05] Checking for CVMFS
[2024-04-27 16:52:05] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-27 16:52:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-27 16:52:06] Running cvmfs_config stat atlas.cern.ch
[2024-04-27 16:52:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-27 16:52:06] 2.11.2.0 1768874 385 53196 132110 2 56 4052320 4194304 910 130560 0 968936 99.276 888126 13783 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-04-27 16:52:06] CVMFS is ok
[2024-04-27 16:52:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 16:52:06] Checking for apptainer binary...
[2024-04-27 16:52:06] apptainer is not installed, using version from CVMFS
[2024-04-27 16:52:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 16:52:06] Trebeth
[2024-04-27 16:52:06] apptainer works
[2024-04-27 16:52:06] Set ATHENA_PROC_NUMBER=12
[2024-04-27 16:52:06] Set ATHENA_CORE_NUMBER=12
[2024-04-27 16:52:06] Starting ATLAS job with PandaID=6185011776
[2024-04-27 16:52:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 17:57:13]  *** The last 200 lines of the pilot log: ***
[2024-04-27 17:57:13] 2024-04-27 21:56:56,642 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2024-04-27 17:57:13] 2024-04-27 21:56:56,740 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2024-04-27 17:57:13] 2024-04-27 21:56:56,741 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-04-27 17:57:13]  activity=['pl', 'pw', 'w', 'default']
[2024-04-27 17:57:13]  allow_lan=True
[2024-04-27 17:57:13]  allow_wan=False
[2024-04-27 17:57:13]  checkinputsize=True
[2024-04-27 17:57:13]  checksum={'adler32': 'ccb3949c'}
[2024-04-27 17:57:13]  dataset=mc23_13p6TeV.603414.PhPy8EG_NNPDF23_A14_ggH125_NNLOPS_tautauh30h20.simul.log.e8559_e8528_s4162_tid38204263_00
[2024-04-27 17:57:13]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 17:57:13]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 17:57:13]  direct_access_lan=False
[2024-04-27 17:57:13]  direct_access_wan=False
[2024-04-27 17:57:13]  domain=
[2024-04-27 17:57:13]  filesize=345483
[2024-04-27 17:57:13]  filetype=log
[2024-04-27 17:57:13]  guid=04851fdf-1480-42db-a6b5-80fc22d9fe45
[2024-04-27 17:57:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 17:57:13]  is_tar=False
[2024-04-27 17:57:13]  lfn=log.38204263._005301.job.log.tgz.1
[2024-04-27 17:57:13]  mtime=0
[2024-04-27 17:57:13]  protocol_id=None
[2024-04-27 17:57:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 17:57:13]  replicas=None
[2024-04-27 17:57:13]  scope=mc23_13p6TeV
[2024-04-27 17:57:13]  status=None
[2024-04-27 17:57:13]  status_code=0
[2024-04-27 17:57:13]  storage_token=
[2024-04-27 17:57:13]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6185011776/log.38204263._005301.job.log.tgz.1
[2024-04-27 17:57:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/08/log.38204263._005301.job.log.tgz.1
[2024-04-27 17:57:13]  workdir=None
[2024-04-27 17:57:13] ]
[2024-04-27 17:57:13] 2024-04-27 21:56:56,773 | INFO     | transferring file log.38204263._005301.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6185011776/log.38204263._005301.job.log.tgz.1 to /var/lib/boinc
[2024-04-27 17:57:13] 2024-04-27 21:56:56,773 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6185011776/log.38204263._005301.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.382042
[2024-04-27 17:57:13] 2024-04-27 21:56:56,788 | INFO     | adding to output.list: log.38204263._005301.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/08/log.38204263._005301.job.log.tg
[2024-04-27 17:57:13] 2024-04-27 21:56:56,789 | INFO     | summary of transferred files:
[2024-04-27 17:57:13] 2024-04-27 21:56:56,789 | INFO     |  -- lfn=log.38204263._005301.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 17:57:13] 2024-04-27 21:56:56,789 | INFO     | stage-out finished correctly
[2024-04-27 17:57:13] 2024-04-27 21:56:57,395 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 17:57:13] 2024-04-27 21:56:57,473 | INFO     | job 6185011776 has state=finished
[2024-04-27 17:57:13] 2024-04-27 21:56:57,473 | INFO     | preparing for final server update for job 6185011776 in state='finished'
[2024-04-27 17:57:13] 2024-04-27 21:56:57,473 | INFO     | this job has now completed (state=finished)
[2024-04-27 17:57:13] 2024-04-27 21:56:57,473 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 17:57:13] 2024-04-27 21:56:57,473 | INFO     | job 6185011776 has finished - writing final server update
[2024-04-27 17:57:13] 2024-04-27 21:56:57,474 | INFO     | total number of processed events: 400 (read)
[2024-04-27 17:57:13] 2024-04-27 21:56:57,494 | INFO     | executing command: lscpu
[2024-04-27 17:57:13] 2024-04-27 21:56:57,545 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2024-04-27 17:57:13] 2024-04-27 21:56:57,546 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 17:57:13] 2024-04-27 21:56:57,593 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 17:57:13] 2024-04-27 21:56:59,056 | INFO     | monitor loop #310: job 0:6185011776 is in state 'finished'
[2024-04-27 17:57:13] 2024-04-27 21:56:59,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 17:57:13] 2024-04-27 21:57:00,622 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 17:57:13] 2024-04-27 21:57:00,622 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6185011776/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 17:57:13] 2024-04-27 21:57:00,623 | INFO     | extracted standard info from prmon json
[2024-04-27 17:57:13] 2024-04-27 21:57:00,623 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 17:57:13] 2024-04-27 21:57:00,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 17:57:13] 2024-04-27 21:57:00,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 17:57:13] 2024-04-27 21:57:00,625 | INFO     | fitting pss+swap vs Time
[2024-04-27 17:57:13] 2024-04-27 21:57:00,626 | INFO     | current memory leak: 53.49 B/s (using 57 data points, chi2=0.37)
[2024-04-27 17:57:13] 2024-04-27 21:57:00,626 | INFO     | ..............................
[2024-04-27 17:57:13] 2024-04-27 21:57:00,626 | INFO     | . Timing measurements:
[2024-04-27 17:57:13] 2024-04-27 21:57:00,626 | INFO     | . get job = 0 s
[2024-04-27 17:57:13] 2024-04-27 21:57:00,626 | INFO     | . initial setup = 2 s
[2024-04-27 17:57:13] 2024-04-27 21:57:00,626 | INFO     | . payload setup = 3 s
[2024-04-27 17:57:13] 2024-04-27 21:57:00,627 | INFO     | . stage-in = 0 s
[2024-04-27 17:57:13] 2024-04-27 21:57:00,627 | INFO     | . payload execution = 3858 s
[2024-04-27 17:57:13] 2024-04-27 21:57:00,627 | INFO     | . stage-out = 0 s
[2024-04-27 17:57:13] 2024-04-27 21:57:00,627 | INFO     | . log creation = 0 s
[2024-04-27 17:57:13] 2024-04-27 21:57:00,627 | INFO     | ..............................
[2024-04-27 17:57:13] 2024-04-27 21:57:00,692 | INFO     | 
[2024-04-27 17:57:13] 2024-04-27 21:57:00,692 | INFO     | job summary report
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | --------------------------------------------------
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | PanDA job id: 6185011776
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | task id: 38204263
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | errors: (none)
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | pilot state: finished 
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | transexitcode: 0
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | exeerrorcode: 0
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | exeerrordiag: 
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | exitcode: 0
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | exitmsg: OK
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | cpuconsumptiontime: 38882 s
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | nevents: 400
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | neventsw: 0
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | pid: 2842106
[2024-04-27 17:57:13] 2024-04-27 21:57:00,693 | INFO     | pgrp: 2842106
[2024-04-27 17:57:13] 2024-04-27 21:57:00,694 | INFO     | corecount: 12
[2024-04-27 17:57:13] 2024-04-27 21:57:00,694 | INFO     | event service: False
[2024-04-27 17:57:13] 2024-04-27 21:57:00,694 | INFO     | sizes: {0: 2375714, 3: 2375920, 11: 2375948, 3866: 2401688, 3868: 2410662, 3869: 2410718, 3872: 2411016}
[2024-04-27 17:57:13] 2024-04-27 21:57:00,694 | INFO     | --------------------------------------------------
[2024-04-27 17:57:13] 2024-04-27 21:57:00,694 | INFO     | 
[2024-04-27 17:57:13] 2024-04-27 21:57:00,694 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | job 6185011776 has completed (purged errors)
[2024-04-27 17:57:13] 2024-04-27 21:57:00,708 | INFO     | overall cleanup function is called
[2024-04-27 17:57:13] 2024-04-27 21:57:01,714 | INFO     | --- collectZombieJob: --- 10, [2842106]
[2024-04-27 17:57:13] 2024-04-27 21:57:01,715 | INFO     | zombie collector waiting for pid 2842106
[2024-04-27 17:57:13] 2024-04-27 21:57:01,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 17:57:13] 2024-04-27 21:57:02,718 | INFO     | collected zombie processes
[2024-04-27 17:57:13] 2024-04-27 21:57:02,719 | INFO     | will now attempt to kill all subprocesses of pid=2842106
[2024-04-27 17:57:13] 2024-04-27 21:57:02,794 | INFO     | process IDs to be killed: [2842106] (in reverse order)
[2024-04-27 17:57:13] 2024-04-27 21:57:02,849 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 17:57:13] 2024-04-27 21:57:02,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 17:57:13] 2024-04-27 21:57:02,854 | INFO     | did not find any defunct processes belonging to 2842106
[2024-04-27 17:57:13] 2024-04-27 21:57:02,858 | INFO     | did not find any defunct processes belonging to 2842106
[2024-04-27 17:57:13] 2024-04-27 21:57:02,858 | INFO     | ready for new job
[2024-04-27 17:57:13] 2024-04-27 21:57:02,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 17:57:13] 2024-04-27 21:57:02,859 | INFO     | *************************************
[2024-04-27 17:57:13] 2024-04-27 21:57:02,859 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 17:57:13] 2024-04-27 21:57:02,860 | INFO     | *************************************
[2024-04-27 17:57:13] 2024-04-27 21:57:02,860 | INFO     | 
[2024-04-27 17:57:13] 2024-04-27 21:57:02,885 | INFO     | architecture information:
[2024-04-27 17:57:13] 2024-04-27 21:57:02,886 | INFO     | executing command: cat /etc/os-release
[2024-04-27 17:57:13] 2024-04-27 21:57:02,894 | INFO     | cat /etc/os-release:
[2024-04-27 17:57:13] NAME="CentOS Linux"
[2024-04-27 17:57:13] VERSION="7 (Core)"
[2024-04-27 17:57:13] ID="centos"
[2024-04-27 17:57:13] ID_LIKE="rhel fedora"
[2024-04-27 17:57:13] VERSION_ID="7"
[2024-04-27 17:57:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 17:57:13] ANSI_COLOR="0;31"
[2024-04-27 17:57:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 17:57:13] HOME_URL="https://www.centos.org/"
[2024-04-27 17:57:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 17:57:13] 
[2024-04-27 17:57:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 17:57:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 17:57:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 17:57:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 17:57:13] 
[2024-04-27 17:57:13] 2024-04-27 21:57:02,894 | INFO     | *************************************
[2024-04-27 17:57:13] 2024-04-27 21:57:03,395 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2024-04-27 17:57:13] 2024-04-27 21:57:03,407 | INFO     | sufficient remaining disk space (393464512512 B)
[2024-04-27 17:57:13] 2024-04-27 21:57:03,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 17:57:13] 2024-04-27 21:57:03,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 17:57:13] 2024-04-27 21:57:03,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 17:57:13] 2024-04-27 21:57:03,408 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 17:57:13] 2024-04-27 21:57:03,408 | INFO     | aborting loop
[2024-04-27 17:57:13] 2024-04-27 21:57:03,408 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 17:57:13] 2024-04-27 21:57:03,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 17:57:13] 2024-04-27 21:57:03,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 17:57:13] 2024-04-27 21:57:03,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 17:57:13] 2024-04-27 21:57:03,698 | INFO     | all data control threads have been joined
[2024-04-27 17:57:13] 2024-04-27 21:57:04,161 | INFO     | all job control threads have been joined
[2024-04-27 17:57:13] 2024-04-27 21:57:04,410 | INFO     | [job] job monitor thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:04,411 | INFO     | [job] retrieve thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:04,595 | INFO     | [job] validate thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:04,602 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:04,650 | INFO     | all payload control threads have been joined
[2024-04-27 17:57:13] 2024-04-27 21:57:04,702 | INFO     | [data] control thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:04,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 17:57:13] 2024-04-27 21:57:04,894 | INFO     | [data] copytool_in thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:04,964 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:05,082 | INFO     | [payload] failed_post thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:05,162 | INFO     | [job] control thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:05,478 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:05,562 | INFO     | [payload] validate_post thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:05,654 | INFO     | [payload] control thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:05,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 17:57:13] 2024-04-27 21:57:05,878 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:06,702 | INFO     | [job] queue monitor thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:06,846 | INFO     | [data] copytool_out thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:07,483 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 17:57:13] 2024-04-27 21:57:08,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712448755520)>', '<ExcThread(monitor, started 139712022947584)>']
[2024-04-27 17:57:13] 2024-04-27 21:57:09,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 17:57:13] 2024-04-27 21:57:09,431 | INFO     | [monitor] control thread has ended
[2024-04-27 17:57:13] 2024-04-27 21:57:13,826 | INFO     | all workflow threads have been joined
[2024-04-27 17:57:13] 2024-04-27 21:57:13,827 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 17:57:13] 2024-04-27 21:57:13,827 | INFO     | traces error code: 0
[2024-04-27 17:57:13] 2024-04-27 21:57:13,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 17:57:13] 2024-04-27 21:57:13,877 [wrapper] ==== pilot stdout END ====
[2024-04-27 17:57:13] 2024-04-27 21:57:13,879 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 17:57:13] 2024-04-27 21:57:13,880 [wrapper] pilotpid: 2835024
[2024-04-27 17:57:13] 2024-04-27 21:57:13,882 [wrapper] Pilot exit status: 0
[2024-04-27 17:57:13] 2024-04-27 21:57:13,888 [wrapper] pandaids: 6185011776
[2024-04-27 17:57:13] 2024-04-27 21:57:13,916 [wrapper] cleanup: SIGTERM to supervisor_pilot 2929308 2835025
[2024-04-27 17:57:13] 2024-04-27 21:57:13,918 [wrapper] Test setup, not cleaning
[2024-04-27 17:57:13] 2024-04-27 21:57:13,920 [wrapper] ==== wrapper stdout END ====
[2024-04-27 17:57:13] 2024-04-27 21:57:13,921 [wrapper] ==== wrapper stderr END ====
[2024-04-27 17:57:13] 2024-04-27 21:57:13,924 [wrapper] apfmon messages muted
[2024-04-27 17:57:13]  *** Error codes and diagnostics ***
[2024-04-27 17:57:13]     "exeErrorCode": 0,
[2024-04-27 17:57:13]     "exeErrorDiag": "",
[2024-04-27 17:57:13]     "pilotErrorCode": 0,
[2024-04-27 17:57:13]     "pilotErrorDiag": "",
[2024-04-27 17:57:13]  *** Listing of results directory ***
[2024-04-27 17:57:13] total 700148
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc    462745 Apr 24 07:03 pilot3.tar.gz
[2024-04-27 17:57:13] -rwx------ 1 boinc boinc     32211 Apr 24 07:08 runpilot2-wrapper.sh
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc      6720 Apr 24 07:08 queuedata.json
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc       100 Apr 27 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 17:57:13] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 16:52 run_atlas
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc       105 Apr 27 16:52 job.xml
[2024-04-27 17:57:13] -rw-r--r-- 2 boinc boinc 518603727 Apr 27 16:52 EVNT.38204261._000201.pool.root.1
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc      7598 Apr 27 16:52 init_data.xml
[2024-04-27 17:57:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 16:52 start_atlas.sh
[2024-04-27 17:57:13] drwxrwx--x 2 boinc boinc      4096 Apr 27 16:52 shared
[2024-04-27 17:57:13] -rw-r--r-- 2 boinc boinc    474816 Apr 27 16:52 input.tar.gz
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc         0 Apr 27 16:52 boinc_lockfile
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc      2651 Apr 27 16:52 pandaJob.out
[2024-04-27 17:57:13] -rw------- 1 boinc boinc       460 Apr 27 16:52 setup.sh.local
[2024-04-27 17:57:13] -rw------- 1 boinc boinc    997146 Apr 27 16:52 agis_schedconf.cvmfs.json
[2024-04-27 17:57:13] -rw------- 1 boinc boinc         0 Apr 27 16:52 agis_ddmendpoints.agis.ALL.json
[2024-04-27 17:57:13] -rw------- 1 boinc boinc   1315307 Apr 27 16:52 cric_ddmendpoints.json
[2024-04-27 17:57:13] drwx------ 4 boinc boinc      4096 Apr 27 16:52 pilot3
[2024-04-27 17:57:13] -rw------- 1 boinc boinc        95 Apr 27 17:56 pilot_heartbeat.json
[2024-04-27 17:57:13] -rw------- 1 boinc boinc 193355519 Apr 27 17:56 HITS.38204263._005301.pool.root.1
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc       530 Apr 27 17:56 boinc_task_state.xml
[2024-04-27 17:57:13] -rw------- 1 boinc boinc      1030 Apr 27 17:56 memory_monitor_summary.json
[2024-04-27 17:57:13] -rw------- 1 boinc boinc    345483 Apr 27 17:56 log.38204263._005301.job.log.tgz.1
[2024-04-27 17:57:13] -rw------- 1 boinc boinc      7663 Apr 27 17:57 heartbeat.json
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc      8192 Apr 27 17:57 boinc_mmap_file
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc        27 Apr 27 17:57 wrapper_checkpoint.txt
[2024-04-27 17:57:13] -rw------- 1 boinc boinc      4342 Apr 27 17:57 pilotlog.txt
[2024-04-27 17:57:13] -rw------- 1 boinc boinc    406974 Apr 27 17:57 log.38204263._005301.job.log.1
[2024-04-27 17:57:13] -rw------- 1 boinc boinc       357 Apr 27 17:57 output.list
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc       620 Apr 27 17:57 runtime_log
[2024-04-27 17:57:13] -rw------- 1 boinc boinc    768000 Apr 27 17:57 result.tar.gz
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc     11459 Apr 27 17:57 runtime_log.err
[2024-04-27 17:57:13] -rw------- 1 boinc boinc       639 Apr 27 17:57 ROeNDm7epJ5nfZGDcpSWOuwoABFKDmABFKDmtxRSDmw2IKDmUx8Efm.diag
[2024-04-27 17:57:13] -rw-r--r-- 1 boinc boinc     20633 Apr 27 17:57 stderr.txt
[2024-04-27 17:57:13] HITS file was successfully produced:
[2024-04-27 17:57:13] -rw------- 1 boinc boinc 193355519 Apr 27 17:56 shared/HITS.pool.root.1
[2024-04-27 17:57:13]  *** Contents of shared directory: ***
[2024-04-27 17:57:13] total 696520
[2024-04-27 17:57:13] -rw-r--r-- 2 boinc boinc 518603727 Apr 27 16:52 ATLAS.root_0
[2024-04-27 17:57:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 16:52 start_atlas.sh
[2024-04-27 17:57:13] -rw-r--r-- 2 boinc boinc    474816 Apr 27 16:52 input.tar.gz
[2024-04-27 17:57:13] -rw------- 1 boinc boinc 193355519 Apr 27 17:56 HITS.pool.root.1
[2024-04-27 17:57:13] -rw------- 1 boinc boinc    768000 Apr 27 17:57 result.tar.gz
17:57:15 (2830453): run_atlas exited; CPU time 38817.357003
17:57:15 (2830453): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN