Name VmlMDmiekJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDmPgQKDm8s60Sn_1
Workunit 222392075
Created 24 Apr 2024, 11:02:05 UTC
Sent 24 Apr 2024, 14:24:59 UTC
Report deadline 2 May 2024, 14:24:59 UTC
Received 27 Apr 2024, 20:54:01 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10687303
Run time 1 hours 11 min 51 sec
CPU time 12 hours 6 min 55 sec
Validate state Valid
Credit 642.14
Device peak FLOPS 65.14 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.88 GB
Peak swap size 3.30 GB
Peak disk usage 1.15 GB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
15:40:10 (2668454): wrapper (7.7.26015): starting
15:40:10 (2668454): wrapper: running run_atlas (--nthreads 12)
[2024-04-27 15:40:10] Arguments: --nthreads 12
[2024-04-27 15:40:10] Threads: 12
[2024-04-27 15:40:10] Checking for CVMFS
[2024-04-27 15:40:11] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-27 15:40:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-27 15:40:11] Running cvmfs_config stat atlas.cern.ch
[2024-04-27 15:40:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-27 15:40:11] 2.11.2.0 1768874 313 52396 132109 2 61 4049669 4194305 87 130560 0 815674 99.141 887061 14104 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-04-27 15:40:11] CVMFS is ok
[2024-04-27 15:40:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 15:40:11] Checking for apptainer binary...
[2024-04-27 15:40:11] apptainer is not installed, using version from CVMFS
[2024-04-27 15:40:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 15:40:11] Trebeth
[2024-04-27 15:40:11] apptainer works
[2024-04-27 15:40:11] Set ATHENA_PROC_NUMBER=12
[2024-04-27 15:40:11] Set ATHENA_CORE_NUMBER=12
[2024-04-27 15:40:11] Starting ATLAS job with PandaID=6184882088
[2024-04-27 15:40:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 16:51:59]  *** The last 200 lines of the pilot log: ***
[2024-04-27 16:51:59]  checkinputsize=True
[2024-04-27 16:51:59]  checksum={'adler32': '3bc95330'}
[2024-04-27 16:51:59]  dataset=mc23_13p6TeV.603428.PhPy8EG_NNPDF23_A14_ZH125J_Zinc_tautau.simul.log.e8559_e8528_s4159_tid38207243_00
[2024-04-27 16:51:59]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 16:51:59]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 16:51:59]  direct_access_lan=False
[2024-04-27 16:51:59]  direct_access_wan=False
[2024-04-27 16:51:59]  domain=
[2024-04-27 16:51:59]  filesize=343881
[2024-04-27 16:51:59]  filetype=log
[2024-04-27 16:51:59]  guid=8f81b90c-173a-479e-bdb3-c093d9bfb483
[2024-04-27 16:51:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 16:51:59]  is_tar=False
[2024-04-27 16:51:59]  lfn=log.38207243._000752.job.log.tgz.1
[2024-04-27 16:51:59]  mtime=0
[2024-04-27 16:51:59]  protocol_id=None
[2024-04-27 16:51:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 16:51:59]  replicas=None
[2024-04-27 16:51:59]  scope=mc23_13p6TeV
[2024-04-27 16:51:59]  status=None
[2024-04-27 16:51:59]  status_code=0
[2024-04-27 16:51:59]  storage_token=
[2024-04-27 16:51:59]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6184882088/log.38207243._000752.job.log.tgz.1
[2024-04-27 16:51:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/12/log.38207243._000752.job.log.tgz.1
[2024-04-27 16:51:59]  workdir=None
[2024-04-27 16:51:59] ]
[2024-04-27 16:51:59] 2024-04-27 20:51:31,724 | INFO     | transferring file log.38207243._000752.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6184882088/log.38207243._000752.job.log.tgz.1 to /var/lib/boinc
[2024-04-27 16:51:59] 2024-04-27 20:51:31,724 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6184882088/log.38207243._000752.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.382072
[2024-04-27 16:51:59] 2024-04-27 20:51:31,736 | INFO     | adding to output.list: log.38207243._000752.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/12/log.38207243._000752.job.log.tg
[2024-04-27 16:51:59] 2024-04-27 20:51:31,737 | INFO     | summary of transferred files:
[2024-04-27 16:51:59] 2024-04-27 20:51:31,737 | INFO     |  -- lfn=log.38207243._000752.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 16:51:59] 2024-04-27 20:51:31,737 | INFO     | stage-out finished correctly
[2024-04-27 16:51:59] 2024-04-27 20:51:32,100 | WARNING  | process 2692349 is no longer using CPU - aborting
[2024-04-27 16:51:59] 2024-04-27 20:51:32,100 | INFO     | will not send any job update
[2024-04-27 16:51:59] 2024-04-27 20:51:33,639 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 16:51:59] 2024-04-27 20:51:33,899 | INFO     | job 6184882088 has state=finished
[2024-04-27 16:51:59] 2024-04-27 20:51:33,899 | INFO     | preparing for final server update for job 6184882088 in state='finished'
[2024-04-27 16:51:59] 2024-04-27 20:51:33,900 | INFO     | this job has now completed (state=finished)
[2024-04-27 16:51:59] 2024-04-27 20:51:33,900 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 16:51:59] 2024-04-27 20:51:33,900 | INFO     | job 6184882088 has finished - writing final server update
[2024-04-27 16:51:59] 2024-04-27 20:51:33,900 | INFO     | total number of processed events: 400 (read)
[2024-04-27 16:51:59] 2024-04-27 20:51:33,923 | INFO     | executing command: lscpu
[2024-04-27 16:51:59] 2024-04-27 20:51:33,974 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2024-04-27 16:51:59] 2024-04-27 20:51:33,974 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 16:51:59] 2024-04-27 20:51:34,032 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 16:51:59] 2024-04-27 20:51:34,603 | INFO     | monitor loop #339: job 0:6184882088 is in state 'finished'
[2024-04-27 16:51:59] 2024-04-27 20:51:34,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 16:51:59] 2024-04-27 20:51:37,106 | INFO     | monitor loop #340: job 0:6184882088 is in state 'finished'
[2024-04-27 16:51:59] 2024-04-27 20:51:37,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 16:51:59] 2024-04-27 20:51:38,983 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 16:51:59] 2024-04-27 20:51:38,984 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6184882088/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 16:51:59] 2024-04-27 20:51:38,985 | INFO     | extracted standard info from prmon json
[2024-04-27 16:51:59] 2024-04-27 20:51:38,985 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 16:51:59] 2024-04-27 20:51:38,985 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 16:51:59] 2024-04-27 20:51:38,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 16:51:59] 2024-04-27 20:51:38,987 | INFO     | fitting pss+swap vs Time
[2024-04-27 16:51:59] 2024-04-27 20:51:38,988 | INFO     | current memory leak: 11.93 B/s (using 63 data points, chi2=0.53)
[2024-04-27 16:51:59] 2024-04-27 20:51:38,988 | INFO     | ..............................
[2024-04-27 16:51:59] 2024-04-27 20:51:38,988 | INFO     | . Timing measurements:
[2024-04-27 16:51:59] 2024-04-27 20:51:38,988 | INFO     | . get job = 0 s
[2024-04-27 16:51:59] 2024-04-27 20:51:38,988 | INFO     | . initial setup = 1 s
[2024-04-27 16:51:59] 2024-04-27 20:51:38,988 | INFO     | . payload setup = 3 s
[2024-04-27 16:51:59] 2024-04-27 20:51:38,988 | INFO     | . stage-in = 0 s
[2024-04-27 16:51:59] 2024-04-27 20:51:38,988 | INFO     | . payload execution = 4250 s
[2024-04-27 16:51:59] 2024-04-27 20:51:38,989 | INFO     | . stage-out = 0 s
[2024-04-27 16:51:59] 2024-04-27 20:51:38,989 | INFO     | . log creation = 0 s
[2024-04-27 16:51:59] 2024-04-27 20:51:38,989 | INFO     | ..............................
[2024-04-27 16:51:59] 2024-04-27 20:51:39,049 | INFO     | 
[2024-04-27 16:51:59] 2024-04-27 20:51:39,049 | INFO     | job summary report
[2024-04-27 16:51:59] 2024-04-27 20:51:39,049 | INFO     | --------------------------------------------------
[2024-04-27 16:51:59] 2024-04-27 20:51:39,049 | INFO     | PanDA job id: 6184882088
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | task id: 38207243
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | errors: (none)
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | pilot state: finished 
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | transexitcode: 0
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | exeerrorcode: 0
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | exeerrordiag: 
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | exitcode: 0
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | exitmsg: OK
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | cpuconsumptiontime: 43649 s
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | nevents: 400
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | neventsw: 0
[2024-04-27 16:51:59] 2024-04-27 20:51:39,050 | INFO     | pid: 2692349
[2024-04-27 16:51:59] 2024-04-27 20:51:39,051 | INFO     | pgrp: 2692349
[2024-04-27 16:51:59] 2024-04-27 20:51:39,051 | INFO     | corecount: 12
[2024-04-27 16:51:59] 2024-04-27 20:51:39,051 | INFO     | event service: False
[2024-04-27 16:51:59] 2024-04-27 20:51:39,051 | INFO     | sizes: {0: 2374135, 1: 2375678, 4: 2375884, 11: 2375912, 4258: 2401874, 4259: 2410848, 4261: 2411032, 4266: 2411202}
[2024-04-27 16:51:59] 2024-04-27 20:51:39,051 | INFO     | --------------------------------------------------
[2024-04-27 16:51:59] 2024-04-27 20:51:39,051 | INFO     | 
[2024-04-27 16:51:59] 2024-04-27 20:51:39,051 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2024-04-27 16:51:59] 2024-04-27 20:51:39,066 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | job 6184882088 has completed (purged errors)
[2024-04-27 16:51:59] 2024-04-27 20:51:39,068 | INFO     | overall cleanup function is called
[2024-04-27 16:51:59] 2024-04-27 20:51:40,074 | INFO     | --- collectZombieJob: --- 10, [2692349]
[2024-04-27 16:51:59] 2024-04-27 20:51:40,075 | INFO     | zombie collector waiting for pid 2692349
[2024-04-27 16:51:59] 2024-04-27 20:51:40,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 16:51:59] 2024-04-27 20:51:41,078 | INFO     | collected zombie processes
[2024-04-27 16:51:59] 2024-04-27 20:51:41,079 | INFO     | will now attempt to kill all subprocesses of pid=2692349
[2024-04-27 16:51:59] 2024-04-27 20:51:41,160 | INFO     | process IDs to be killed: [2692349] (in reverse order)
[2024-04-27 16:51:59] 2024-04-27 20:51:41,220 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 16:51:59] 2024-04-27 20:51:41,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 16:51:59] 2024-04-27 20:51:41,228 | INFO     | did not find any defunct processes belonging to 2692349
[2024-04-27 16:51:59] 2024-04-27 20:51:41,234 | INFO     | did not find any defunct processes belonging to 2692349
[2024-04-27 16:51:59] 2024-04-27 20:51:41,234 | INFO     | ready for new job
[2024-04-27 16:51:59] 2024-04-27 20:51:41,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 16:51:59] 2024-04-27 20:51:41,235 | INFO     | *************************************
[2024-04-27 16:51:59] 2024-04-27 20:51:41,236 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 16:51:59] 2024-04-27 20:51:41,236 | INFO     | *************************************
[2024-04-27 16:51:59] 2024-04-27 20:51:41,236 | INFO     | 
[2024-04-27 16:51:59] 2024-04-27 20:51:41,257 | INFO     | architecture information:
[2024-04-27 16:51:59] 2024-04-27 20:51:41,258 | INFO     | executing command: cat /etc/os-release
[2024-04-27 16:51:59] 2024-04-27 20:51:41,268 | INFO     | cat /etc/os-release:
[2024-04-27 16:51:59] NAME="CentOS Linux"
[2024-04-27 16:51:59] VERSION="7 (Core)"
[2024-04-27 16:51:59] ID="centos"
[2024-04-27 16:51:59] ID_LIKE="rhel fedora"
[2024-04-27 16:51:59] VERSION_ID="7"
[2024-04-27 16:51:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 16:51:59] ANSI_COLOR="0;31"
[2024-04-27 16:51:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 16:51:59] HOME_URL="https://www.centos.org/"
[2024-04-27 16:51:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 16:51:59] 
[2024-04-27 16:51:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 16:51:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 16:51:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 16:51:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 16:51:59] 
[2024-04-27 16:51:59] 2024-04-27 20:51:41,268 | INFO     | *************************************
[2024-04-27 16:51:59] 2024-04-27 20:51:41,771 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2024-04-27 16:51:59] 2024-04-27 20:51:41,783 | INFO     | sufficient remaining disk space (391364214784 B)
[2024-04-27 16:51:59] 2024-04-27 20:51:41,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 16:51:59] 2024-04-27 20:51:41,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 16:51:59] 2024-04-27 20:51:42,081 | INFO     | all payload control threads have been joined
[2024-04-27 16:51:59] 2024-04-27 20:51:42,113 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-27 16:51:59] 2024-04-27 20:51:42,113 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-27 16:51:59] 2024-04-27 20:51:42,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 16:51:59] 2024-04-27 20:51:42,114 | INFO     | will abort loop
[2024-04-27 16:51:59] 2024-04-27 20:51:42,186 | INFO     | all data control threads have been joined
[2024-04-27 16:51:59] 2024-04-27 20:51:42,218 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 16:51:59] 2024-04-27 20:51:42,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 16:51:59] 2024-04-27 20:51:42,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 16:51:59] 2024-04-27 20:51:42,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 16:51:59] 2024-04-27 20:51:42,787 | INFO     | [job] retrieve thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:42,818 | INFO     | [data] copytool_in thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:42,830 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:43,082 | INFO     | [payload] control thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:43,118 | INFO     | [job] job monitor thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:43,122 | INFO     | all job control threads have been joined
[2024-04-27 16:51:59] 2024-04-27 20:51:43,190 | INFO     | [data] control thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:43,358 | INFO     | [payload] validate_post thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:44,014 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:44,046 | INFO     | [payload] failed_post thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:44,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 16:51:59] 2024-04-27 20:51:44,126 | INFO     | [job] control thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:44,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 16:51:59] 2024-04-27 20:51:44,206 | INFO     | [job] validate thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:44,250 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:44,318 | INFO     | [data] copytool_out thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:45,058 | INFO     | [job] queue monitor thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:48,195 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:51,918 | INFO     | job.realtimelogging is not enabled
[2024-04-27 16:51:59] 2024-04-27 20:51:52,922 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 16:51:59] 2024-04-27 20:51:54,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667528296256)>', '<ExcThread(monitor, started 139666825144064)>']
[2024-04-27 16:51:59] 2024-04-27 20:51:55,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 16:51:59] 2024-04-27 20:51:55,271 | INFO     | [monitor] control thread has ended
[2024-04-27 16:51:59] 2024-04-27 20:51:59,484 | INFO     | all workflow threads have been joined
[2024-04-27 16:51:59] 2024-04-27 20:51:59,484 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 16:51:59] 2024-04-27 20:51:59,484 | INFO     | traces error code: 0
[2024-04-27 16:51:59] 2024-04-27 20:51:59,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 16:51:59] 2024-04-27 20:51:59,541 [wrapper] ==== pilot stdout END ====
[2024-04-27 16:51:59] 2024-04-27 20:51:59,544 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 16:51:59] 2024-04-27 20:51:59,546 [wrapper] pilotpid: 2673260
[2024-04-27 16:51:59] 2024-04-27 20:51:59,547 [wrapper] Pilot exit status: 0
[2024-04-27 16:51:59] 2024-04-27 20:51:59,555 [wrapper] pandaids: 6184882088
[2024-04-27 16:51:59] 2024-04-27 20:51:59,604 [wrapper] cleanup: SIGTERM to supervisor_pilot 2811204 2673261
[2024-04-27 16:51:59] 2024-04-27 20:51:59,606 [wrapper] Test setup, not cleaning
[2024-04-27 16:51:59] 2024-04-27 20:51:59,607 [wrapper] ==== wrapper stdout END ====
[2024-04-27 16:51:59] 2024-04-27 20:51:59,609 [wrapper] ==== wrapper stderr END ====
[2024-04-27 16:51:59] 2024-04-27 20:51:59,612 [wrapper] apfmon messages muted
[2024-04-27 16:51:59]  *** Error codes and diagnostics ***
[2024-04-27 16:51:59]     "exeErrorCode": 0,
[2024-04-27 16:51:59]     "exeErrorDiag": "",
[2024-04-27 16:51:59]     "pilotErrorCode": 0,
[2024-04-27 16:51:59]     "pilotErrorDiag": "",
[2024-04-27 16:51:59]  *** Listing of results directory ***
[2024-04-27 16:51:59] total 698100
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc    462745 Apr 24 01:07 pilot3.tar.gz
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc      6720 Apr 24 01:44 queuedata.json
[2024-04-27 16:51:59] -rwx------ 1 boinc boinc     32211 Apr 24 01:47 runpilot2-wrapper.sh
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc       100 Apr 27 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 16:51:59] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 15:40 run_atlas
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc       105 Apr 27 15:40 job.xml
[2024-04-27 16:51:59] -rw-r--r-- 2 boinc boinc     17537 Apr 27 15:40 start_atlas.sh
[2024-04-27 16:51:59] drwxrwx--x 2 boinc boinc      4096 Apr 27 15:40 shared
[2024-04-27 16:51:59] -rw-r--r-- 2 boinc boinc    474805 Apr 27 15:40 input.tar.gz
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc      7598 Apr 27 15:40 init_data.xml
[2024-04-27 16:51:59] -rw-r--r-- 2 boinc boinc 517292773 Apr 27 15:40 EVNT.38207241._000032.pool.root.1
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc         0 Apr 27 15:40 boinc_lockfile
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc      2609 Apr 27 15:40 pandaJob.out
[2024-04-27 16:51:59] -rw------- 1 boinc boinc       460 Apr 27 15:40 setup.sh.local
[2024-04-27 16:51:59] -rw------- 1 boinc boinc    997138 Apr 27 15:40 agis_schedconf.cvmfs.json
[2024-04-27 16:51:59] -rw------- 1 boinc boinc         0 Apr 27 15:40 agis_ddmendpoints.agis.ALL.json
[2024-04-27 16:51:59] -rw------- 1 boinc boinc   1315307 Apr 27 15:40 cric_ddmendpoints.json
[2024-04-27 16:51:59] drwx------ 4 boinc boinc      4096 Apr 27 15:40 pilot3
[2024-04-27 16:51:59] -rw------- 1 boinc boinc 192511202 Apr 27 16:51 HITS.38207243._000752.pool.root.1
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc       530 Apr 27 16:51 boinc_task_state.xml
[2024-04-27 16:51:59] -rw------- 1 boinc boinc        95 Apr 27 16:51 pilot_heartbeat.json
[2024-04-27 16:51:59] -rw------- 1 boinc boinc      1028 Apr 27 16:51 memory_monitor_summary.json
[2024-04-27 16:51:59] -rw------- 1 boinc boinc    343881 Apr 27 16:51 log.38207243._000752.job.log.tgz.1
[2024-04-27 16:51:59] -rw------- 1 boinc boinc      7656 Apr 27 16:51 heartbeat.json
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc        27 Apr 27 16:51 wrapper_checkpoint.txt
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc      8192 Apr 27 16:51 boinc_mmap_file
[2024-04-27 16:51:59] -rw------- 1 boinc boinc      4477 Apr 27 16:51 pilotlog.txt
[2024-04-27 16:51:59] -rw------- 1 boinc boinc    441314 Apr 27 16:51 log.38207243._000752.job.log.1
[2024-04-27 16:51:59] -rw------- 1 boinc boinc       357 Apr 27 16:51 output.list
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc       620 Apr 27 16:51 runtime_log
[2024-04-27 16:51:59] -rw------- 1 boinc boinc    798720 Apr 27 16:51 result.tar.gz
[2024-04-27 16:51:59] -rw------- 1 boinc boinc       639 Apr 27 16:51 VmlMDmiekJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDmPgQKDm8s60Sn.diag
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc     11459 Apr 27 16:51 runtime_log.err
[2024-04-27 16:51:59] -rw-r--r-- 1 boinc boinc     20671 Apr 27 16:51 stderr.txt
[2024-04-27 16:51:59] HITS file was successfully produced:
[2024-04-27 16:51:59] -rw------- 1 boinc boinc 192511202 Apr 27 16:51 shared/HITS.pool.root.1
[2024-04-27 16:51:59]  *** Contents of shared directory: ***
[2024-04-27 16:51:59] total 694444
[2024-04-27 16:51:59] -rw-r--r-- 2 boinc boinc     17537 Apr 27 15:40 start_atlas.sh
[2024-04-27 16:51:59] -rw-r--r-- 2 boinc boinc    474805 Apr 27 15:40 input.tar.gz
[2024-04-27 16:51:59] -rw-r--r-- 2 boinc boinc 517292773 Apr 27 15:40 ATLAS.root_0
[2024-04-27 16:51:59] -rw------- 1 boinc boinc 192511202 Apr 27 16:51 HITS.pool.root.1
[2024-04-27 16:51:59] -rw------- 1 boinc boinc    798720 Apr 27 16:51 result.tar.gz
16:52:00 (2668454): run_atlas exited; CPU time 43564.382663
16:52:00 (2668454): called boinc_finish(0)

</stderr_txt>
]]>


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