Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
09:26:59 (1286813): wrapper (7.7.26015): starting
09:26:59 (1286813): wrapper: running run_atlas (--nthreads 4)
[2024-04-25 09:26:59] Arguments: --nthreads 4
[2024-04-25 09:26:59] Threads: 4
[2024-04-25 09:26:59] Checking for CVMFS
[2024-04-25 09:26:59] No cvmfs_config command found, will try listing directly
[2024-04-25 09:26:59] CVMFS is ok
[2024-04-25 09:26:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-25 09:26:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-25 09:26:59] Further information can be found at the LHC@home message board.
[2024-04-25 09:26:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-25 09:26:59] Checking for apptainer binary...
[2024-04-25 09:26:59] which: no apptainer in ((null))
[2024-04-25 09:26:59] apptainer is not installed, using version from CVMFS
[2024-04-25 09:26:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-25 09:27:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-04-25 09:27:00] apptainer works
[2024-04-25 09:27:00] Set ATHENA_PROC_NUMBER=4
[2024-04-25 09:27:00] Set ATHENA_CORE_NUMBER=4
[2024-04-25 09:27:00] Starting ATLAS job with PandaID=6184929766
[2024-04-25 09:27:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:35:14 (2241048): wrapper (7.7.26015): starting
23:35:14 (2241048): wrapper: running run_atlas (--nthreads 4)
[2024-04-25 23:35:14] Arguments: --nthreads 4
[2024-04-25 23:35:14] Threads: 4
[2024-04-25 23:35:14] This job has been restarted, cleaning up previous attempt
[2024-04-25 23:35:14] Checking for CVMFS
[2024-04-25 23:35:14] No cvmfs_config command found, will try listing directly
[2024-04-25 23:35:14] CVMFS is ok
[2024-04-25 23:35:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-25 23:35:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-25 23:35:14] Further information can be found at the LHC@home message board.
[2024-04-25 23:35:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-25 23:35:14] Checking for apptainer binary...
[2024-04-25 23:35:14] which: no apptainer in ((null))
[2024-04-25 23:35:14] apptainer is not installed, using version from CVMFS
[2024-04-25 23:35:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-25 23:35:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-04-25 23:35:15] apptainer works
[2024-04-25 23:35:15] Set ATHENA_PROC_NUMBER=4
[2024-04-25 23:35:15] Set ATHENA_CORE_NUMBER=4
[2024-04-25 23:35:15] Starting ATLAS job with PandaID=6184929766
[2024-04-25 23:35:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-25 23:38:24] Job failed
[2024-04-25 23:38:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-04-25 23:38:24] ++ pwd
[2024-04-25 23:38:24] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot12/slots/1/
[2024-04-25 23:38:24] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot12/slots/1/
[2024-04-25 23:38:24] + mv ATLAS.root_0 EVNT.38207241._000048.pool.root.1
[2024-04-25 23:38:24] mv: 'ATLAS.root_0' and 'EVNT.38207241._000048.pool.root.1' are the same file
[2024-04-25 23:38:24] + tar --strip-components=5 -xvf input.tar.gz
[2024-04-25 23:38:24] + umask 077
[2024-04-25 23:38:24] ++ date +%s
[2024-04-25 23:38:24] + ACCOUNTING_STARTTIME=1714080915
[2024-04-25 23:38:24] + echo 'Detecting resource accounting method available for the job.'
[2024-04-25 23:38:24] Detecting resource accounting method available for the job.
[2024-04-25 23:38:24] + JOB_ACCOUNTING=
[2024-04-25 23:38:24] + command -v arc-job-cgroup
[2024-04-25 23:38:24] + '[' -z '' ']'
[2024-04-25 23:38:24] + GNU_TIME=/usr/bin/time
[2024-04-25 23:38:24] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-04-25 23:38:24] Looking for /usr/bin/time tool for accounting measurements
[2024-04-25 23:38:24] + '[' '!' -z /usr/bin/time ']'
[2024-04-25 23:38:24] + /usr/bin/time --version
[2024-04-25 23:38:24] + echo 'GNU time found and will be used for job accounting.'
[2024-04-25 23:38:24] GNU time found and will be used for job accounting.
[2024-04-25 23:38:24] + JOB_ACCOUNTING=gnutime
[2024-04-25 23:38:24] + '[' -z gnutime ']'
[2024-04-25 23:38:24] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-04-25 23:38:24] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-04-25 23:38:24] + export GTAG=http://aipanda404.cern.ch/data/jobs/2024-04-24/BOINC_MCORE/6184929766.out
[2024-04-25 23:38:24] + GTAG=http://aipanda404.cern.ch/data/jobs/2024-04-24/BOINC_MCORE/6184929766.out
[2024-04-25 23:38:24] + export PILOT_NOKILL=YES
[2024-04-25 23:38:24] + PILOT_NOKILL=YES
[2024-04-25 23:38:24] + export GRID_GLOBAL_JOBID=Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm
[2024-04-25 23:38:24] + GRID_GLOBAL_JOBID=Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm
[2024-04-25 23:38:24] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm
[2024-04-25 23:38:24] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm
[2024-04-25 23:38:24] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-04-25 23:38:24] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-04-25 23:38:24] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-04-25 23:38:24] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-04-25 23:38:24] ++ pwd
[2024-04-25 23:38:24] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot12/slots/1
[2024-04-25 23:38:24] + RUNTIME_JOB_STDIN=/dev/null
[2024-04-25 23:38:24] ++ pwd
[2024-04-25 23:38:24] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot12/slots/1/log.38207243._001170.job.log.1
[2024-04-25 23:38:24] ++ pwd
[2024-04-25 23:38:24] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot12/slots/1/log.38207243._001170.job.log.1
[2024-04-25 23:38:24] ++ pwd
[2024-04-25 23:38:24] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot12/slots/1.diag
[2024-04-25 23:38:24] + '[' '!' -z '' ']'
[2024-04-25 23:38:24] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-04-25 23:38:24] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-04-25 23:38:24] + RUNTIME_FRONTEND_SEES_NODE=
[2024-04-25 23:38:24] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-04-25 23:38:24] + '[' '!' -z '' ']'
[2024-04-25 23:38:24] + '[' -z yes ']'
[2024-04-25 23:38:24] ++ pwd
[2024-04-25 23:38:24] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot12/slots/1/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag
[2024-04-25 23:38:24] + runtimeenvironments=
[2024-04-25 23:38:24] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-04-25 23:38:24] + RTE_function_0 1
[2024-04-25 23:38:24] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-25 23:38:24] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-25 23:38:24] + export BOINC_APP=ATLAS
[2024-04-25 23:38:24] + BOINC_APP=ATLAS
[2024-04-25 23:38:24] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-25 23:38:24] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-25 23:38:24] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-25 23:38:24] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-25 23:38:24] + '[' -z 1 ']'
[2024-04-25 23:38:24] + '[' 1 == 1 ']'
[2024-04-25 23:38:24] + shift
[2024-04-25 23:38:24] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-04-25 23:38:24] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-25 23:38:24] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-04-25 23:38:24] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot12/slots/1/
[2024-04-25 23:38:24] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot12/slots/1/
[2024-04-25 23:38:24] + '[' -e /scratch/boinc/var/slot12/slots/1/init_data.xml ']'
[2024-04-25 23:38:24] + grep '<use_http_proxy/>' /scratch/boinc/var/slot12/slots/1/init_data.xml
[2024-04-25 23:38:24] + '[' -e /scratch/boinc/var/slot12/slots/1/init_data.xml ']'
[2024-04-25 23:38:24] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot12/slots/1/init_data.xml
[2024-04-25 23:38:24] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-04-25 23:38:24] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-25 23:38:24] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-04-25 23:38:24] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-25 23:38:24] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-25 23:38:24] + '[' 0 -ne 0 ']'
[2024-04-25 23:38:24] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-04-25 23:38:24] + '[' -f /etc/os-release ']'
[2024-04-25 23:38:24] +++ cat /etc/os-release
[2024-04-25 23:38:24] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-04-25 23:38:24] +++ NAME='CentOS Linux'
[2024-04-25 23:38:24] +++ VERSION='7 (Core)'
[2024-04-25 23:38:24] +++ ID=centos
[2024-04-25 23:38:24] +++ ID_LIKE='rhel fedora'
[2024-04-25 23:38:24] +++ VERSION_ID=7
[2024-04-25 23:38:24] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-04-25 23:38:24] +++ ANSI_COLOR='0;31'
[2024-04-25 23:38:24] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-04-25 23:38:24] +++ HOME_URL=https://www.centos.org/
[2024-04-25 23:38:24] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-04-25 23:38:24] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-04-25 23:38:24] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-04-25 23:38:24] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-04-25 23:38:24] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-04-25 23:38:24] ++ echo 'CentOS Linux 7 (Core)'
[2024-04-25 23:38:24] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-04-25 23:38:24] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-04-25 23:38:24] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-04-25 23:38:24] + HOME=/scratch/boinc/var/slot12/slots/1
[2024-04-25 23:38:24] + export HOME
[2024-04-25 23:38:24] + cd /scratch/boinc/var/slot12/slots/1
[2024-04-25 23:38:24] + '[' '!' -z '' ']'
[2024-04-25 23:38:24] + '[' -z '' ']'
[2024-04-25 23:38:24] ++ /bin/hostname -f
[2024-04-25 23:38:24] + nodename=skurut15.grid.cesnet.cz
[2024-04-25 23:38:24] + echo nodename=skurut15.grid.cesnet.cz
[2024-04-25 23:38:24] + echo Processors=1
[2024-04-25 23:38:24] + echo Benchmark=HEPSPEC:1.0
[2024-04-25 23:38:24] + executable=./runpilot2-wrapper.sh
[2024-04-25 23:38:24] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-04-25 23:38:24] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-04-25 23:38:24] ++ head -n 1
[2024-04-25 23:38:24] ++ tr -d '\0'
[2024-04-25 23:38:24] + line1='#!/bin/bash'
[2024-04-25 23:38:24] ++ echo '#!/bin/bash'
[2024-04-25 23:38:24] ++ sed -n 's/^#! *//p'
[2024-04-25 23:38:24] + shebang=/bin/bash
[2024-04-25 23:38:24] ++ echo /bin/bash
[2024-04-25 23:38:24] ++ awk '{print $1}'
[2024-04-25 23:38:24] + interpreter=/bin/bash
[2024-04-25 23:38:24] + '[' /bin/bash = /usr/bin/env ']'
[2024-04-25 23:38:24] + '[' x/bin/bash = x ']'
[2024-04-25 23:38:24] + type /bin/bash
[2024-04-25 23:38:24] + '[' xgnutime = xgnutime ']'
[2024-04-25 23:38:24] + /usr/bin/time -o /scratch/boinc/var/slot12/slots/1/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.2.4 -z -t --piloturl local --mute --container
[2024-04-25 23:38:24] + RESULT=2
[2024-04-25 23:38:24] + sed -i -e /nodename=/d /scratch/boinc/var/slot12/slots/1/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag
[2024-04-25 23:38:24] ++ grep domain_name init_data.xml
[2024-04-25 23:38:24] ++ awk -F '>' '{print $2}'
[2024-04-25 23:38:24] ++ awk -F '<' '{print $1}'
[2024-04-25 23:38:24] ++ sed -e 's# #_#g'
[2024-04-25 23:38:24] + hostname=skurut15.grid.cesnet.cz
[2024-04-25 23:38:24] ++ grep user_name init_data.xml
[2024-04-25 23:38:24] ++ awk -F '>' '{print $2}'
[2024-04-25 23:38:24] ++ sed -e 's# #_#g'
[2024-04-25 23:38:24] ++ awk -F '<' '{print $1}'
[2024-04-25 23:38:24] + username=praguelcg2
[2024-04-25 23:38:24] + nodename=praguelcg2@skurut15.grid.cesnet.cz
[2024-04-25 23:38:24] + echo nodename=praguelcg2@skurut15.grid.cesnet.cz
[2024-04-25 23:38:24] + '[' -n 4 ']'
[2024-04-25 23:38:24] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot12/slots/1/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag
[2024-04-25 23:38:24] + echo exitcode=2
[2024-04-25 23:38:24] + runtimeenvironments=
[2024-04-25 23:38:24] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-04-25 23:38:24] + RTE_function_0 2
[2024-04-25 23:38:24] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-25 23:38:24] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-25 23:38:24] + export BOINC_APP=ATLAS
[2024-04-25 23:38:24] + BOINC_APP=ATLAS
[2024-04-25 23:38:24] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-25 23:38:24] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-25 23:38:24] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-25 23:38:24] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-25 23:38:24] + '[' -z 2 ']'
[2024-04-25 23:38:24] + '[' 2 == 1 ']'
[2024-04-25 23:38:24] + '[' 0 -ne 0 ']'
[2024-04-25 23:38:24] + echo 'zip all output files'
[2024-04-25 23:38:24] + flist='*.diag '
[2024-04-25 23:38:24] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-25 23:38:24] + '[' -e ./heartbeat.json ']'
[2024-04-25 23:38:24] + flist='*.diag  ./heartbeat.json'
[2024-04-25 23:38:24] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-25 23:38:24] + '[' -e ./output.list ']'
[2024-04-25 23:38:24] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-25 23:38:24] + '[' -e ./log.38207243._001170.job.log.1 ']'
[2024-04-25 23:38:24] + flist='*.diag  ./heartbeat.json ./log.38207243._001170.job.log.1'
[2024-04-25 23:38:24] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-25 23:38:24] + '[' -e ./log.38207243._001170.job.log.1 ']'
[2024-04-25 23:38:24] + flist='*.diag  ./heartbeat.json ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1'
[2024-04-25 23:38:24] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-25 23:38:24] + '[' -e ./gmlog/ ']'
[2024-04-25 23:38:24] + '[' -f output.list ']'
[2024-04-25 23:38:24] + tar cvf result.tar.gz Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag ./heartbeat.json ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1
[2024-04-25 23:38:24] + '[' xgnutime = xcgroup ']'
[2024-04-25 23:38:24] + '[' -n '' ']'
[2024-04-25 23:38:24] + '[' -n '' ']'
[2024-04-25 23:38:24] ++ date +%s
[2024-04-25 23:38:24] + ACCOUNTING_ENDTIME=1714081103
[2024-04-25 23:38:24] ++ date -d '1970-01-01 UTC 1714080915 seconds' +%Y%m%d%H%M%SZ
[2024-04-25 23:38:24] + echo LRMSStartTime=20240425233515Z
[2024-04-25 23:38:24] ++ date -d '1970-01-01 UTC 1714081103 seconds' +%Y%m%d%H%M%SZ
[2024-04-25 23:38:24] + echo LRMSEndTime=20240425233823Z
[2024-04-25 23:38:24] + echo walltime=188
[2024-04-25 23:38:24] + echo exitcode=2
[2024-04-25 23:38:24] + exit 2
[2024-04-25 23:38:24] ./log.38207243._001170.job.log.1
[2024-04-25 23:38:24] ./runtime_log.err
[2024-04-25 23:38:24] ./pilotlog.txt
[2024-04-25 23:38:24] ./runtime_log
[2024-04-25 23:38:24] ./PanDA_Pilot-6184929766/PoolFileCatalog.xml
[2024-04-25 23:38:24] ./PanDA_Pilot-6184929766/pilotlog.txt
[2024-04-25 23:38:24] ./PanDA_Pilot-6184929766/prmon.log
[2024-04-25 23:38:24] ./PanDA_Pilot-6184929766/log.EVNTtoHITS
[2024-04-25 23:38:24] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-04-25 23:38:24] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-04-25 23:38:24] ./pilot3/pilot/util/loggingsupport.py
[2024-04-25 23:38:24] ./pilot3/pilot/util/realtimelogger.py
06:30:56 (685928): wrapper (7.7.26015): starting
06:30:56 (685928): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 06:30:56] Arguments: --nthreads 4
[2024-04-26 06:30:56] Threads: 4
[2024-04-26 06:30:56] This job has been restarted, cleaning up previous attempt
[2024-04-26 06:30:56] Checking for CVMFS
[2024-04-26 06:30:56] No cvmfs_config command found, will try listing directly
[2024-04-26 06:30:56] CVMFS is ok
[2024-04-26 06:30:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 06:30:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 06:30:56] Further information can be found at the LHC@home message board.
[2024-04-26 06:30:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 06:30:56] Checking for apptainer binary...
[2024-04-26 06:30:56] which: no apptainer in ((null))
[2024-04-26 06:30:56] apptainer is not installed, using version from CVMFS
[2024-04-26 06:30:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 06:30:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-04-26 06:30:57] apptainer works
[2024-04-26 06:30:57] Set ATHENA_PROC_NUMBER=4
[2024-04-26 06:30:57] Set ATHENA_CORE_NUMBER=4
[2024-04-26 06:30:57] Starting ATLAS job with PandaID=6184929766
[2024-04-26 06:30:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 06:34:07] Job failed
[2024-04-26 06:34:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-04-26 06:34:07] ++ pwd
[2024-04-26 06:34:07] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot12/slots/1/
[2024-04-26 06:34:07] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot12/slots/1/
[2024-04-26 06:34:07] + mv ATLAS.root_0 EVNT.38207241._000048.pool.root.1
[2024-04-26 06:34:07] mv: 'ATLAS.root_0' and 'EVNT.38207241._000048.pool.root.1' are the same file
[2024-04-26 06:34:07] + tar --strip-components=5 -xvf input.tar.gz
[2024-04-26 06:34:07] + umask 077
[2024-04-26 06:34:07] ++ date +%s
[2024-04-26 06:34:07] + ACCOUNTING_STARTTIME=1714105857
[2024-04-26 06:34:07] + echo 'Detecting resource accounting method available for the job.'
[2024-04-26 06:34:07] Detecting resource accounting method available for the job.
[2024-04-26 06:34:07] + JOB_ACCOUNTING=
[2024-04-26 06:34:07] + command -v arc-job-cgroup
[2024-04-26 06:34:07] + '[' -z '' ']'
[2024-04-26 06:34:07] + GNU_TIME=/usr/bin/time
[2024-04-26 06:34:07] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-04-26 06:34:07] Looking for /usr/bin/time tool for accounting measurements
[2024-04-26 06:34:07] + '[' '!' -z /usr/bin/time ']'
[2024-04-26 06:34:07] + /usr/bin/time --version
[2024-04-26 06:34:07] + echo 'GNU time found and will be used for job accounting.'
[2024-04-26 06:34:07] GNU time found and will be used for job accounting.
[2024-04-26 06:34:07] + JOB_ACCOUNTING=gnutime
[2024-04-26 06:34:07] + '[' -z gnutime ']'
[2024-04-26 06:34:07] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-04-26 06:34:07] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-04-26 06:34:07] + export GTAG=http://aipanda404.cern.ch/data/jobs/2024-04-24/BOINC_MCORE/6184929766.out
[2024-04-26 06:34:07] + GTAG=http://aipanda404.cern.ch/data/jobs/2024-04-24/BOINC_MCORE/6184929766.out
[2024-04-26 06:34:07] + export PILOT_NOKILL=YES
[2024-04-26 06:34:07] + PILOT_NOKILL=YES
[2024-04-26 06:34:07] + export GRID_GLOBAL_JOBID=Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm
[2024-04-26 06:34:07] + GRID_GLOBAL_JOBID=Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm
[2024-04-26 06:34:07] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm
[2024-04-26 06:34:07] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm
[2024-04-26 06:34:07] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-04-26 06:34:07] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-04-26 06:34:07] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-04-26 06:34:07] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-04-26 06:34:07] ++ pwd
[2024-04-26 06:34:07] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot12/slots/1
[2024-04-26 06:34:07] + RUNTIME_JOB_STDIN=/dev/null
[2024-04-26 06:34:07] ++ pwd
[2024-04-26 06:34:07] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot12/slots/1/log.38207243._001170.job.log.1
[2024-04-26 06:34:07] ++ pwd
[2024-04-26 06:34:07] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot12/slots/1/log.38207243._001170.job.log.1
[2024-04-26 06:34:07] ++ pwd
[2024-04-26 06:34:07] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot12/slots/1.diag
[2024-04-26 06:34:07] + '[' '!' -z '' ']'
[2024-04-26 06:34:07] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-04-26 06:34:07] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-04-26 06:34:07] + RUNTIME_FRONTEND_SEES_NODE=
[2024-04-26 06:34:07] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-04-26 06:34:07] + '[' '!' -z '' ']'
[2024-04-26 06:34:07] + '[' -z yes ']'
[2024-04-26 06:34:07] ++ pwd
[2024-04-26 06:34:07] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot12/slots/1/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag
[2024-04-26 06:34:07] + runtimeenvironments=
[2024-04-26 06:34:07] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-04-26 06:34:07] + RTE_function_0 1
[2024-04-26 06:34:07] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-26 06:34:07] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-26 06:34:07] + export BOINC_APP=ATLAS
[2024-04-26 06:34:07] + BOINC_APP=ATLAS
[2024-04-26 06:34:07] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-26 06:34:07] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-26 06:34:07] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-26 06:34:07] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-26 06:34:07] + '[' -z 1 ']'
[2024-04-26 06:34:07] + '[' 1 == 1 ']'
[2024-04-26 06:34:07] + shift
[2024-04-26 06:34:07] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-04-26 06:34:07] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-26 06:34:07] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-04-26 06:34:07] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot12/slots/1/
[2024-04-26 06:34:07] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot12/slots/1/
[2024-04-26 06:34:07] + '[' -e /scratch/boinc/var/slot12/slots/1/init_data.xml ']'
[2024-04-26 06:34:07] + grep '<use_http_proxy/>' /scratch/boinc/var/slot12/slots/1/init_data.xml
[2024-04-26 06:34:07] + '[' -e /scratch/boinc/var/slot12/slots/1/init_data.xml ']'
[2024-04-26 06:34:07] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot12/slots/1/init_data.xml
[2024-04-26 06:34:07] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-04-26 06:34:07] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-26 06:34:07] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-04-26 06:34:07] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-26 06:34:07] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-26 06:34:07] + '[' 0 -ne 0 ']'
[2024-04-26 06:34:07] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-04-26 06:34:07] + '[' -f /etc/os-release ']'
[2024-04-26 06:34:07] +++ cat /etc/os-release
[2024-04-26 06:34:07] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-04-26 06:34:07] +++ NAME='CentOS Linux'
[2024-04-26 06:34:07] +++ VERSION='7 (Core)'
[2024-04-26 06:34:07] +++ ID=centos
[2024-04-26 06:34:07] +++ ID_LIKE='rhel fedora'
[2024-04-26 06:34:07] +++ VERSION_ID=7
[2024-04-26 06:34:07] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-04-26 06:34:07] +++ ANSI_COLOR='0;31'
[2024-04-26 06:34:07] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-04-26 06:34:07] +++ HOME_URL=https://www.centos.org/
[2024-04-26 06:34:07] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-04-26 06:34:07] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-04-26 06:34:07] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-04-26 06:34:07] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-04-26 06:34:07] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-04-26 06:34:07] ++ echo 'CentOS Linux 7 (Core)'
[2024-04-26 06:34:07] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-04-26 06:34:07] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-04-26 06:34:07] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-04-26 06:34:07] + HOME=/scratch/boinc/var/slot12/slots/1
[2024-04-26 06:34:07] + export HOME
[2024-04-26 06:34:07] + cd /scratch/boinc/var/slot12/slots/1
[2024-04-26 06:34:07] + '[' '!' -z '' ']'
[2024-04-26 06:34:07] + '[' -z '' ']'
[2024-04-26 06:34:07] ++ /bin/hostname -f
[2024-04-26 06:34:07] + nodename=skurut15.grid.cesnet.cz
[2024-04-26 06:34:07] + echo nodename=skurut15.grid.cesnet.cz
[2024-04-26 06:34:07] + echo Processors=1
[2024-04-26 06:34:07] + echo Benchmark=HEPSPEC:1.0
[2024-04-26 06:34:07] + executable=./runpilot2-wrapper.sh
[2024-04-26 06:34:07] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-04-26 06:34:07] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-04-26 06:34:07] ++ head -n 1
[2024-04-26 06:34:07] ++ tr -d '\0'
[2024-04-26 06:34:07] + line1='#!/bin/bash'
[2024-04-26 06:34:07] ++ echo '#!/bin/bash'
[2024-04-26 06:34:07] ++ sed -n 's/^#! *//p'
[2024-04-26 06:34:07] + shebang=/bin/bash
[2024-04-26 06:34:07] ++ echo /bin/bash
[2024-04-26 06:34:07] ++ awk '{print $1}'
[2024-04-26 06:34:07] + interpreter=/bin/bash
[2024-04-26 06:34:07] + '[' /bin/bash = /usr/bin/env ']'
[2024-04-26 06:34:07] + '[' x/bin/bash = x ']'
[2024-04-26 06:34:07] + type /bin/bash
[2024-04-26 06:34:07] + '[' xgnutime = xgnutime ']'
[2024-04-26 06:34:07] + /usr/bin/time -o /scratch/boinc/var/slot12/slots/1/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.2.4 -z -t --piloturl local --mute --container
[2024-04-26 06:34:07] + RESULT=2
[2024-04-26 06:34:07] + sed -i -e /nodename=/d /scratch/boinc/var/slot12/slots/1/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag
[2024-04-26 06:34:07] ++ grep domain_name init_data.xml
[2024-04-26 06:34:07] ++ awk -F '<' '{print $1}'
[2024-04-26 06:34:07] ++ awk -F '>' '{print $2}'
[2024-04-26 06:34:07] ++ sed -e 's# #_#g'
[2024-04-26 06:34:07] + hostname=skurut15.grid.cesnet.cz
[2024-04-26 06:34:07] ++ grep user_name init_data.xml
[2024-04-26 06:34:07] ++ awk -F '>' '{print $2}'
[2024-04-26 06:34:07] ++ sed -e 's# #_#g'
[2024-04-26 06:34:07] ++ awk -F '<' '{print $1}'
[2024-04-26 06:34:07] + username=praguelcg2
[2024-04-26 06:34:07] + nodename=praguelcg2@skurut15.grid.cesnet.cz
[2024-04-26 06:34:07] + echo nodename=praguelcg2@skurut15.grid.cesnet.cz
[2024-04-26 06:34:07] + '[' -n 4 ']'
[2024-04-26 06:34:07] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot12/slots/1/Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag
[2024-04-26 06:34:07] + echo exitcode=2
[2024-04-26 06:34:07] + runtimeenvironments=
[2024-04-26 06:34:07] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-04-26 06:34:07] + RTE_function_0 2
[2024-04-26 06:34:07] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-26 06:34:07] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-26 06:34:07] + export BOINC_APP=ATLAS
[2024-04-26 06:34:07] + BOINC_APP=ATLAS
[2024-04-26 06:34:07] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-26 06:34:07] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-26 06:34:07] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-26 06:34:07] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-26 06:34:07] + '[' -z 2 ']'
[2024-04-26 06:34:07] + '[' 2 == 1 ']'
[2024-04-26 06:34:07] + '[' 0 -ne 0 ']'
[2024-04-26 06:34:07] + echo 'zip all output files'
[2024-04-26 06:34:07] + flist='*.diag '
[2024-04-26 06:34:07] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-26 06:34:07] + '[' -e ./heartbeat.json ']'
[2024-04-26 06:34:07] + flist='*.diag  ./heartbeat.json'
[2024-04-26 06:34:07] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-26 06:34:07] + '[' -e ./output.list ']'
[2024-04-26 06:34:07] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-26 06:34:07] + '[' -e ./log.38207243._001170.job.log.1 ']'
[2024-04-26 06:34:07] + flist='*.diag  ./heartbeat.json ./log.38207243._001170.job.log.1'
[2024-04-26 06:34:07] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-26 06:34:07] + '[' -e ./log.38207243._001170.job.log.1 ']'
[2024-04-26 06:34:07] + flist='*.diag  ./heartbeat.json ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1'
[2024-04-26 06:34:07] + for f in ./heartbeat.json ./output.list ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1 ./gmlog/
[2024-04-26 06:34:07] + '[' -e ./gmlog/ ']'
[2024-04-26 06:34:07] + '[' -f output.list ']'
[2024-04-26 06:34:07] + tar cvf result.tar.gz Bs5KDmlCnJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDm3FNKDm9yqkfm.diag ./heartbeat.json ./log.38207243._001170.job.log.1 ./log.38207243._001170.job.log.1
[2024-04-26 06:34:07] + '[' xgnutime = xcgroup ']'
[2024-04-26 06:34:07] + '[' -n '' ']'
[2024-04-26 06:34:07] + '[' -n '' ']'
[2024-04-26 06:34:07] ++ date +%s
[2024-04-26 06:34:07] + ACCOUNTING_ENDTIME=1714106047
[2024-04-26 06:34:07] ++ date -d '1970-01-01 UTC 1714105857 seconds' +%Y%m%d%H%M%SZ
[2024-04-26 06:34:07] + echo LRMSStartTime=20240426063057Z
[2024-04-26 06:34:07] ++ date -d '1970-01-01 UTC 1714106047 seconds' +%Y%m%d%H%M%SZ
[2024-04-26 06:34:07] + echo LRMSEndTime=20240426063407Z
[2024-04-26 06:34:07] + echo walltime=190
[2024-04-26 06:34:07] + echo exitcode=2
[2024-04-26 06:34:07] + exit 2
[2024-04-26 06:34:07] ./log.38207243._001170.job.log.1
[2024-04-26 06:34:07] ./runtime_log.err
[2024-04-26 06:34:07] ./pilotlog.txt
[2024-04-26 06:34:07] ./runtime_log
[2024-04-26 06:34:07] ./PanDA_Pilot-6184929766/PoolFileCatalog.xml
[2024-04-26 06:34:07] ./PanDA_Pilot-6184929766/pilotlog.txt
[2024-04-26 06:34:07] ./PanDA_Pilot-6184929766/prmon.log
[2024-04-26 06:34:07] ./PanDA_Pilot-6184929766/log.EVNTtoHITS
[2024-04-26 06:34:07] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-04-26 06:34:07] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-04-26 06:34:07] ./pilot3/pilot/util/loggingsupport.py
[2024-04-26 06:34:07] ./pilot3/pilot/util/realtimelogger.py
06:44:08 (685928): run_atlas exited; CPU time 13.958768
06:44:08 (685928): app exit status: 0x1
06:44:08 (685928): called boinc_finish(195)

</stderr_txt>
]]>

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