Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:51:41 (1199666): wrapper (7.7.26015): starting
00:51:41 (1199666): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 00:51:41] Arguments: --nthreads 4
[2024-04-27 00:51:41] Threads: 4
[2024-04-27 00:51:41] Checking for CVMFS
[2024-04-27 00:51:41] No cvmfs_config command found, will try listing directly
[2024-04-27 00:51:42] CVMFS is ok
[2024-04-27 00:51:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 00:51:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 00:51:42] Further information can be found at the LHC@home message board.
[2024-04-27 00:51:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 00:51:42] Checking for apptainer binary...
[2024-04-27 00:51:42] which: no apptainer in ((null))
[2024-04-27 00:51:42] apptainer is not installed, using version from CVMFS
[2024-04-27 00:51:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 00:51:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-04-27 00:51:42] apptainer works
[2024-04-27 00:51:42] Set ATHENA_PROC_NUMBER=4
[2024-04-27 00:51:42] Set ATHENA_CORE_NUMBER=4
[2024-04-27 00:51:42] Starting ATLAS job with PandaID=6183959860
[2024-04-27 00:51:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 04:39:45]  *** The last 200 lines of the pilot log: ***
[2024-04-27 04:39:45]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 04:39:45]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 04:39:45]  direct_access_lan=False
[2024-04-27 04:39:45]  direct_access_wan=False
[2024-04-27 04:39:45]  domain=
[2024-04-27 04:39:45]  filesize=321648
[2024-04-27 04:39:45]  filetype=log
[2024-04-27 04:39:45]  guid=56557627-73fd-468c-8345-8bacaac74680
[2024-04-27 04:39:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 04:39:45]  is_tar=False
[2024-04-27 04:39:45]  lfn=log.38204279._022916.job.log.tgz.1
[2024-04-27 04:39:45]  mtime=0
[2024-04-27 04:39:45]  protocol_id=None
[2024-04-27 04:39:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 04:39:45]  replicas=None
[2024-04-27 04:39:45]  scope=mc23_13p6TeV
[2024-04-27 04:39:45]  status=None
[2024-04-27 04:39:45]  status_code=0
[2024-04-27 04:39:45]  storage_token=
[2024-04-27 04:39:45]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6183959860/log.38204279._022916.job.log.tgz.1
[2024-04-27 04:39:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/93/log.38204279._022916.job.log.tgz.1
[2024-04-27 04:39:45]  workdir=None
[2024-04-27 04:39:45] ]
[2024-04-27 04:39:45] 2024-04-27 02:39:21,076 | INFO     | transferring file log.38204279._022916.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6183959860/log.38204279._022916.job.log.tgz.1 to /scratch/b
[2024-04-27 04:39:45] 2024-04-27 02:39:21,076 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6183959860/log.38204279._022916.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2024-04-27 04:39:45] 2024-04-27 02:39:21,089 | INFO     | adding to output.list: log.38204279._022916.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/93/log.38204279._022916.job.log.tg
[2024-04-27 04:39:45] 2024-04-27 02:39:21,089 | INFO     | summary of transferred files:
[2024-04-27 04:39:45] 2024-04-27 02:39:21,089 | INFO     |  -- lfn=log.38204279._022916.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 04:39:45] 2024-04-27 02:39:21,090 | INFO     | stage-out finished correctly
[2024-04-27 04:39:45] 2024-04-27 02:39:21,146 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 04:39:45] 2024-04-27 02:39:21,946 | INFO     | monitor loop #1062: job 0:6183959860 is in state 'finished'
[2024-04-27 04:39:45] 2024-04-27 02:39:21,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 04:39:45] 2024-04-27 02:39:22,941 | INFO     | job 6183959860 has state=finished
[2024-04-27 04:39:45] 2024-04-27 02:39:22,941 | INFO     | preparing for final server update for job 6183959860 in state='finished'
[2024-04-27 04:39:45] 2024-04-27 02:39:22,942 | INFO     | this job has now completed (state=finished)
[2024-04-27 04:39:45] 2024-04-27 02:39:22,942 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 04:39:45] 2024-04-27 02:39:22,942 | INFO     | job 6183959860 has finished - writing final server update
[2024-04-27 04:39:45] 2024-04-27 02:39:22,943 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3467658/.job.ad'
[2024-04-27 04:39:45] 2024-04-27 02:39:22,943 | INFO     | total number of processed events: 400 (read)
[2024-04-27 04:39:45] 2024-04-27 02:39:22,946 | INFO     | executing command: lscpu
[2024-04-27 04:39:45] 2024-04-27 02:39:22,973 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-27 04:39:45] 2024-04-27 02:39:22,973 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 04:39:45] 2024-04-27 02:39:22,999 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 04:39:45] 2024-04-27 02:39:24,453 | INFO     | monitor loop #1063: job 0:6183959860 is in state 'finished'
[2024-04-27 04:39:45] 2024-04-27 02:39:24,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,588 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 04:39:45] 2024-04-27 02:39:25,588 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6183959860/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,589 | INFO     | extracted standard info from prmon json
[2024-04-27 04:39:45] 2024-04-27 02:39:25,589 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 04:39:45] 2024-04-27 02:39:25,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 04:39:45] 2024-04-27 02:39:25,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 04:39:45] 2024-04-27 02:39:25,592 | INFO     | fitting pss+swap vs Time
[2024-04-27 04:39:45] 2024-04-27 02:39:25,594 | INFO     | current chi2=3.885081983354087 (change=17.035087912291118 %)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,594 | INFO     | right removable region: 218
[2024-04-27 04:39:45] 2024-04-27 02:39:25,595 | INFO     | current chi2=2.278252048884184 (change=51.348521920729794 %)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,596 | INFO     | current chi2=0.9147414631135234 (change=59.84897880102709 %)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,597 | INFO     | current chi2=0.8443625364113498 (change=7.693859909074578 %)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,597 | INFO     | left removable region: 30
[2024-04-27 04:39:45] 2024-04-27 02:39:25,598 | INFO     | current memory leak: 2.01 B/s (using 188 data points, chi2=0.00)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,598 | INFO     | ..............................
[2024-04-27 04:39:45] 2024-04-27 02:39:25,598 | INFO     | . Timing measurements:
[2024-04-27 04:39:45] 2024-04-27 02:39:25,598 | INFO     | . get job = 0 s
[2024-04-27 04:39:45] 2024-04-27 02:39:25,598 | INFO     | . initial setup = 1 s
[2024-04-27 04:39:45] 2024-04-27 02:39:25,599 | INFO     | . payload setup = 4 s
[2024-04-27 04:39:45] 2024-04-27 02:39:25,599 | INFO     | . stage-in = 0 s
[2024-04-27 04:39:45] 2024-04-27 02:39:25,599 | INFO     | . payload execution = 13626 s
[2024-04-27 04:39:45] 2024-04-27 02:39:25,599 | INFO     | . stage-out = 0 s
[2024-04-27 04:39:45] 2024-04-27 02:39:25,599 | INFO     | . log creation = 0 s
[2024-04-27 04:39:45] 2024-04-27 02:39:25,599 | INFO     | ..............................
[2024-04-27 04:39:45] 2024-04-27 02:39:25,655 | INFO     | 
[2024-04-27 04:39:45] 2024-04-27 02:39:25,655 | INFO     | job summary report
[2024-04-27 04:39:45] 2024-04-27 02:39:25,655 | INFO     | --------------------------------------------------
[2024-04-27 04:39:45] 2024-04-27 02:39:25,655 | INFO     | PanDA job id: 6183959860
[2024-04-27 04:39:45] 2024-04-27 02:39:25,655 | INFO     | task id: 38204279
[2024-04-27 04:39:45] 2024-04-27 02:39:25,655 | INFO     | errors: (none)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,655 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | pilot state: finished 
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | transexitcode: 0
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | exeerrorcode: 0
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | exeerrordiag: 
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | exitcode: 0
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | exitmsg: OK
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | cpuconsumptiontime: 51687 s
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | nevents: 400
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | neventsw: 0
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | pid: 1210759
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | pgrp: 1210759
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | corecount: 4
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | event service: False
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | sizes: {0: 2375576, 1: 2375718, 4: 2375924, 11: 2375952, 13635: 2406407, 13636: 2415572, 13637: 2415572, 13641: 2415742}
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | --------------------------------------------------
[2024-04-27 04:39:45] 2024-04-27 02:39:25,656 | INFO     | 
[2024-04-27 04:39:45] 2024-04-27 02:39:25,657 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-04-27 04:39:45] 2024-04-27 02:39:25,672 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,672 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,672 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,672 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,674 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 04:39:45] 2024-04-27 02:39:25,674 | INFO     | job 6183959860 has completed (purged errors)
[2024-04-27 04:39:45] 2024-04-27 02:39:25,674 | INFO     | overall cleanup function is called
[2024-04-27 04:39:45] 2024-04-27 02:39:26,680 | INFO     | --- collectZombieJob: --- 10, [1210759]
[2024-04-27 04:39:45] 2024-04-27 02:39:26,681 | INFO     | zombie collector waiting for pid 1210759
[2024-04-27 04:39:45] 2024-04-27 02:39:26,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 04:39:45] 2024-04-27 02:39:27,684 | INFO     | collected zombie processes
[2024-04-27 04:39:45] 2024-04-27 02:39:27,684 | INFO     | will now attempt to kill all subprocesses of pid=1210759
[2024-04-27 04:39:45] 2024-04-27 02:39:27,773 | INFO     | process IDs to be killed: [1210759] (in reverse order)
[2024-04-27 04:39:45] 2024-04-27 02:39:27,840 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 04:39:45] 2024-04-27 02:39:27,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 04:39:45] 2024-04-27 02:39:27,844 | INFO     | did not find any defunct processes belonging to 1210759
[2024-04-27 04:39:45] 2024-04-27 02:39:27,847 | INFO     | did not find any defunct processes belonging to 1210759
[2024-04-27 04:39:45] 2024-04-27 02:39:27,847 | INFO     | ready for new job
[2024-04-27 04:39:45] 2024-04-27 02:39:27,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 04:39:45] 2024-04-27 02:39:27,849 | INFO     | *************************************
[2024-04-27 04:39:45] 2024-04-27 02:39:27,849 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 04:39:45] 2024-04-27 02:39:27,849 | INFO     | *************************************
[2024-04-27 04:39:45] 2024-04-27 02:39:27,849 | INFO     | 
[2024-04-27 04:39:45] 2024-04-27 02:39:27,850 | INFO     | architecture information:
[2024-04-27 04:39:45] 2024-04-27 02:39:27,851 | INFO     | executing command: cat /etc/os-release
[2024-04-27 04:39:45] 2024-04-27 02:39:27,863 | INFO     | cat /etc/os-release:
[2024-04-27 04:39:45] NAME="CentOS Linux"
[2024-04-27 04:39:45] VERSION="7 (Core)"
[2024-04-27 04:39:45] ID="centos"
[2024-04-27 04:39:45] ID_LIKE="rhel fedora"
[2024-04-27 04:39:45] VERSION_ID="7"
[2024-04-27 04:39:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 04:39:45] ANSI_COLOR="0;31"
[2024-04-27 04:39:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 04:39:45] HOME_URL="https://www.centos.org/"
[2024-04-27 04:39:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 04:39:45] 
[2024-04-27 04:39:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 04:39:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 04:39:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 04:39:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 04:39:45] 
[2024-04-27 04:39:45] 2024-04-27 02:39:27,864 | INFO     | *************************************
[2024-04-27 04:39:45] 2024-04-27 02:39:28,366 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-04-27 04:39:45] 2024-04-27 02:39:28,420 | INFO     | sufficient remaining disk space (1641283584000 B)
[2024-04-27 04:39:45] 2024-04-27 02:39:28,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 04:39:45] 2024-04-27 02:39:28,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 04:39:45] 2024-04-27 02:39:28,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 04:39:45] 2024-04-27 02:39:28,421 | INFO     | aborting loop
[2024-04-27 04:39:45] 2024-04-27 02:39:28,570 | INFO     | all job control threads have been joined
[2024-04-27 04:39:45] 2024-04-27 02:39:28,820 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 04:39:45] 2024-04-27 02:39:28,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 04:39:45] 2024-04-27 02:39:28,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 04:39:45] 2024-04-27 02:39:29,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 04:39:45] 2024-04-27 02:39:29,339 | INFO     | all payload control threads have been joined
[2024-04-27 04:39:45] 2024-04-27 02:39:29,426 | INFO     | [job] retrieve thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:29,426 | INFO     | [job] job monitor thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:29,440 | INFO     | all data control threads have been joined
[2024-04-27 04:39:45] 2024-04-27 02:39:29,575 | INFO     | [job] control thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:29,683 | INFO     | [data] copytool_in thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:29,756 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:30,316 | INFO     | [job] validate thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:30,344 | INFO     | [payload] control thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:30,360 | INFO     | [payload] failed_post thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:30,376 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:30,445 | INFO     | [data] control thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:30,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 04:39:45] 2024-04-27 02:39:30,692 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:30,960 | INFO     | [payload] validate_post thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:31,160 | INFO     | [data] copytool_out thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:31,667 | INFO     | [job] queue monitor thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:31,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 04:39:45] 2024-04-27 02:39:35,761 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:38,848 | INFO     | job.realtimelogging is not enabled
[2024-04-27 04:39:45] 2024-04-27 02:39:39,854 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 04:39:45] 2024-04-27 02:39:40,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47145654268992)>', '<ExcThread(monitor, started 47145821300480)>']
[2024-04-27 04:39:45] 2024-04-27 02:39:40,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 04:39:45] 2024-04-27 02:39:40,875 | INFO     | [monitor] control thread has ended
[2024-04-27 04:39:45] 2024-04-27 02:39:45,275 | INFO     | all workflow threads have been joined
[2024-04-27 04:39:45] 2024-04-27 02:39:45,275 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 04:39:45] 2024-04-27 02:39:45,275 | INFO     | traces error code: 0
[2024-04-27 04:39:45] 2024-04-27 02:39:45,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 04:39:45] 2024-04-27 02:39:45,349 [wrapper] ==== pilot stdout END ====
[2024-04-27 04:39:45] 2024-04-27 02:39:45,351 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 04:39:45] 2024-04-27 02:39:45,354 [wrapper] pilotpid: 1203875
[2024-04-27 04:39:45] 2024-04-27 02:39:45,356 [wrapper] Pilot exit status: 0
[2024-04-27 04:39:45] 2024-04-27 02:39:45,362 [wrapper] pandaids: 6183959860
[2024-04-27 04:39:45] 2024-04-27 02:39:45,398 [wrapper] cleanup: SIGTERM to supervisor_pilot 1608755 1203876
[2024-04-27 04:39:45] 2024-04-27 02:39:45,400 [wrapper] Test setup, not cleaning
[2024-04-27 04:39:45] 2024-04-27 02:39:45,402 [wrapper] ==== wrapper stdout END ====
[2024-04-27 04:39:45] 2024-04-27 02:39:45,404 [wrapper] ==== wrapper stderr END ====
[2024-04-27 04:39:45] 2024-04-27 02:39:45,407 [wrapper] apfmon messages muted
[2024-04-27 04:39:45]  *** Error codes and diagnostics ***
[2024-04-27 04:39:45]     "exeErrorCode": 0,
[2024-04-27 04:39:45]     "exeErrorDiag": "",
[2024-04-27 04:39:45]     "pilotErrorCode": 0,
[2024-04-27 04:39:45]     "pilotErrorDiag": "",
[2024-04-27 04:39:45]  *** Listing of results directory ***
[2024-04-27 04:39:45] total 626948
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc    462745 Apr 23 03:19 pilot3.tar.gz
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc      6720 Apr 23 03:43 queuedata.json
[2024-04-27 04:39:45] -rwx------ 1 boinc boinc     32211 Apr 23 03:44 runpilot2-wrapper.sh
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc       100 Apr 27 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 04:39:45] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 00:51 run_atlas
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc       105 Apr 27 00:51 job.xml
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc      6457 Apr 27 00:51 init_data.xml
[2024-04-27 04:39:45] -rw-r--r-- 2 boinc boinc 455077221 Apr 27 00:51 EVNT.38204277._000645.pool.root.1
[2024-04-27 04:39:45] -rw-r--r-- 2 boinc boinc     17537 Apr 27 00:51 start_atlas.sh
[2024-04-27 04:39:45] drwxrwx--x 2 boinc boinc      4096 Apr 27 00:51 shared
[2024-04-27 04:39:45] -rw-r--r-- 2 boinc boinc    474802 Apr 27 00:51 input.tar.gz
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc         0 Apr 27 00:51 boinc_lockfile
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc      2583 Apr 27 00:51 pandaJob.out
[2024-04-27 04:39:45] -rw------- 1 boinc boinc       424 Apr 27 00:51 setup.sh.local
[2024-04-27 04:39:45] -rw------- 1 boinc boinc    997383 Apr 27 00:51 agis_schedconf.cvmfs.json
[2024-04-27 04:39:45] -rw------- 1 boinc boinc   1315307 Apr 27 00:51 cric_ddmendpoints.json
[2024-04-27 04:39:45] drwx------ 4 boinc boinc      4096 Apr 27 00:51 pilot3
[2024-04-27 04:39:45] -rw------- 1 boinc boinc 180173863 Apr 27 04:38 HITS.38204279._022916.pool.root.1
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc       531 Apr 27 04:39 boinc_task_state.xml
[2024-04-27 04:39:45] -rw------- 1 boinc boinc      1050 Apr 27 04:39 memory_monitor_summary.json
[2024-04-27 04:39:45] -rw------- 1 boinc boinc         0 Apr 27 04:39 agis_ddmendpoints.agis.ALL.json
[2024-04-27 04:39:45] -rw------- 1 boinc boinc    321648 Apr 27 04:39 log.38204279._022916.job.log.tgz.1
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc        28 Apr 27 04:39 wrapper_checkpoint.txt
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc      8192 Apr 27 04:39 boinc_mmap_file
[2024-04-27 04:39:45] -rw------- 1 boinc boinc      7742 Apr 27 04:39 heartbeat.json
[2024-04-27 04:39:45] -rw------- 1 boinc boinc        95 Apr 27 04:39 pilot_heartbeat.json
[2024-04-27 04:39:45] -rw------- 1 boinc boinc      4294 Apr 27 04:39 pilotlog.txt
[2024-04-27 04:39:45] -rw------- 1 boinc boinc   1302635 Apr 27 04:39 log.38204279._022916.job.log.1
[2024-04-27 04:39:45] -rw------- 1 boinc boinc       357 Apr 27 04:39 output.list
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc       620 Apr 27 04:39 runtime_log
[2024-04-27 04:39:45] -rw------- 1 boinc boinc   1648640 Apr 27 04:39 result.tar.gz
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc     11410 Apr 27 04:39 runtime_log.err
[2024-04-27 04:39:45] -rw------- 1 boinc boinc       658 Apr 27 04:39 T0oKDmnNKJ5n9Rq4apoT9bVoABFKDmABFKDmtztZDmOvLKDmB50cGn.diag
[2024-04-27 04:39:45] -rw-r--r-- 1 boinc boinc     20913 Apr 27 04:39 stderr.txt
[2024-04-27 04:39:45] HITS file was successfully produced:
[2024-04-27 04:39:45] -rw------- 1 boinc boinc 180173863 Apr 27 04:38 shared/HITS.pool.root.1
[2024-04-27 04:39:45]  *** Contents of shared directory: ***
[2024-04-27 04:39:45] total 622468
[2024-04-27 04:39:45] -rw-r--r-- 2 boinc boinc 455077221 Apr 27 00:51 ATLAS.root_0
[2024-04-27 04:39:45] -rw-r--r-- 2 boinc boinc     17537 Apr 27 00:51 start_atlas.sh
[2024-04-27 04:39:45] -rw-r--r-- 2 boinc boinc    474802 Apr 27 00:51 input.tar.gz
[2024-04-27 04:39:45] -rw------- 1 boinc boinc 180173863 Apr 27 04:38 HITS.pool.root.1
[2024-04-27 04:39:45] -rw------- 1 boinc boinc   1648640 Apr 27 04:39 result.tar.gz
04:39:47 (1199666): run_atlas exited; CPU time 51451.036165
04:39:47 (1199666): called boinc_finish(0)

</stderr_txt>
]]>

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