Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:10:53 (3528586): wrapper (7.7.26015): starting
13:10:53 (3528586): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 13:10:53] Arguments: --nthreads 4
[2024-04-26 13:10:53] Threads: 4
[2024-04-26 13:10:53] Checking for CVMFS
[2024-04-26 13:10:53] No cvmfs_config command found, will try listing directly
[2024-04-26 13:10:53] CVMFS is ok
[2024-04-26 13:10:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 13:10:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 13:10:53] Further information can be found at the LHC@home message board.
[2024-04-26 13:10:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 13:10:53] Checking for apptainer binary...
[2024-04-26 13:10:53] which: no apptainer in ((null))
[2024-04-26 13:10:53] apptainer is not installed, using version from CVMFS
[2024-04-26 13:10:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 13:10:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2024-04-26 13:10:54] apptainer works
[2024-04-26 13:10:54] Set ATHENA_PROC_NUMBER=4
[2024-04-26 13:10:54] Set ATHENA_CORE_NUMBER=4
[2024-04-26 13:10:54] Starting ATLAS job with PandaID=6184304066
[2024-04-26 13:10:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 16:37:16]  *** The last 200 lines of the pilot log: ***
[2024-04-26 16:37:16]  direct_access_lan=False
[2024-04-26 16:37:16]  direct_access_wan=False
[2024-04-26 16:37:16]  domain=
[2024-04-26 16:37:16]  filesize=311875
[2024-04-26 16:37:16]  filetype=log
[2024-04-26 16:37:16]  guid=7e0599fc-dad6-42c0-9c88-82bcc298c4e6
[2024-04-26 16:37:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 16:37:16]  is_tar=False
[2024-04-26 16:37:16]  lfn=log.38204279._023918.job.log.tgz.1
[2024-04-26 16:37:16]  mtime=0
[2024-04-26 16:37:16]  protocol_id=None
[2024-04-26 16:37:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 16:37:16]  replicas=None
[2024-04-26 16:37:16]  scope=mc23_13p6TeV
[2024-04-26 16:37:16]  status=None
[2024-04-26 16:37:16]  status_code=0
[2024-04-26 16:37:16]  storage_token=
[2024-04-26 16:37:16]  surl=/scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6184304066/log.38204279._023918.job.log.tgz.1
[2024-04-26 16:37:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/4f/log.38204279._023918.job.log.tgz.1
[2024-04-26 16:37:16]  workdir=None
[2024-04-26 16:37:16] ]
[2024-04-26 16:37:16] 2024-04-26 14:36:52,487 | INFO     | transferring file log.38204279._023918.job.log.tgz.1 from /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6184304066/log.38204279._023918.job.log.tgz.1 to /scratch/b
[2024-04-26 16:37:16] 2024-04-26 14:36:52,487 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6184304066/log.38204279._023918.job.log.tgz.1 /scratch/boinc/var/slot60/slots/0/lo
[2024-04-26 16:37:16] 2024-04-26 14:36:52,614 | INFO     | adding to output.list: log.38204279._023918.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/4f/log.38204279._023918.job.log.tg
[2024-04-26 16:37:16] 2024-04-26 14:36:52,614 | INFO     | summary of transferred files:
[2024-04-26 16:37:16] 2024-04-26 14:36:52,614 | INFO     |  -- lfn=log.38204279._023918.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 16:37:16] 2024-04-26 14:36:52,614 | INFO     | stage-out finished correctly
[2024-04-26 16:37:16] 2024-04-26 14:36:53,301 | INFO     | monitor loop #948: job 0:6184304066 is in state 'finished'
[2024-04-26 16:37:16] 2024-04-26 14:36:53,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 16:37:16] 2024-04-26 14:36:54,940 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 16:37:16] 2024-04-26 14:36:55,804 | INFO     | monitor loop #949: job 0:6184304066 is in state 'finished'
[2024-04-26 16:37:16] 2024-04-26 14:36:55,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 16:37:16] 2024-04-26 14:36:56,171 | INFO     | job 6184304066 has state=finished
[2024-04-26 16:37:16] 2024-04-26 14:36:56,171 | INFO     | preparing for final server update for job 6184304066 in state='finished'
[2024-04-26 16:37:16] 2024-04-26 14:36:56,172 | INFO     | this job has now completed (state=finished)
[2024-04-26 16:37:16] 2024-04-26 14:36:56,172 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 16:37:16] 2024-04-26 14:36:56,172 | INFO     | job 6184304066 has finished - writing final server update
[2024-04-26 16:37:16] 2024-04-26 14:36:56,173 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4080844/.job.ad'
[2024-04-26 16:37:16] 2024-04-26 14:36:56,173 | INFO     | total number of processed events: 400 (read)
[2024-04-26 16:37:16] 2024-04-26 14:36:56,180 | INFO     | executing command: lscpu
[2024-04-26 16:37:16] 2024-04-26 14:36:56,233 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 16:37:16] 2024-04-26 14:36:56,233 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 16:37:16] 2024-04-26 14:36:56,271 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 16:37:16] 2024-04-26 14:36:58,307 | INFO     | monitor loop #950: job 0:6184304066 is in state 'finished'
[2024-04-26 16:37:16] 2024-04-26 14:36:58,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,424 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 16:37:16] 2024-04-26 14:36:59,424 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6184304066/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,425 | INFO     | extracted standard info from prmon json
[2024-04-26 16:37:16] 2024-04-26 14:36:59,426 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 16:37:16] 2024-04-26 14:36:59,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 16:37:16] 2024-04-26 14:36:59,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 16:37:16] 2024-04-26 14:36:59,430 | INFO     | fitting pss+swap vs Time
[2024-04-26 16:37:16] 2024-04-26 14:36:59,432 | INFO     | current chi2=4.085536314885994 (change=15.936102966118856 %)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,432 | INFO     | right removable region: 197
[2024-04-26 16:37:16] 2024-04-26 14:36:59,433 | INFO     | current chi2=2.3473212772308587 (change=51.70157380914638 %)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,434 | INFO     | current chi2=0.8535328079759814 (change=63.63800659691133 %)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,435 | INFO     | current chi2=0.8134937654221647 (change=4.690978739149234 %)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,435 | INFO     | left removable region: 30
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | current memory leak: 1.45 B/s (using 167 data points, chi2=0.00)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | ..............................
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | . Timing measurements:
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | . get job = 0 s
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | . initial setup = 1 s
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | . payload setup = 4 s
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | . stage-in = 0 s
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | . payload execution = 12327 s
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | . stage-out = 0 s
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | . log creation = 0 s
[2024-04-26 16:37:16] 2024-04-26 14:36:59,436 | INFO     | ..............................
[2024-04-26 16:37:16] 2024-04-26 14:36:59,925 | INFO     | 
[2024-04-26 16:37:16] 2024-04-26 14:36:59,925 | INFO     | job summary report
[2024-04-26 16:37:16] 2024-04-26 14:36:59,925 | INFO     | --------------------------------------------------
[2024-04-26 16:37:16] 2024-04-26 14:36:59,925 | INFO     | PanDA job id: 6184304066
[2024-04-26 16:37:16] 2024-04-26 14:36:59,925 | INFO     | task id: 38204279
[2024-04-26 16:37:16] 2024-04-26 14:36:59,925 | INFO     | errors: (none)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,925 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | pilot state: finished 
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | transexitcode: 0
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | exeerrorcode: 0
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | exeerrordiag: 
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | exitcode: 0
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | exitmsg: OK
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | cpuconsumptiontime: 46645 s
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | nevents: 400
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | neventsw: 0
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | pid: 3540128
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | pgrp: 3540128
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | corecount: 4
[2024-04-26 16:37:16] 2024-04-26 14:36:59,926 | INFO     | event service: False
[2024-04-26 16:37:16] 2024-04-26 14:36:59,927 | INFO     | sizes: {0: 2375640, 3: 2375846, 11: 2375874, 12335: 2405648, 12337: 2414630, 12339: 2414686, 12343: 2414984}
[2024-04-26 16:37:16] 2024-04-26 14:36:59,927 | INFO     | --------------------------------------------------
[2024-04-26 16:37:16] 2024-04-26 14:36:59,927 | INFO     | 
[2024-04-26 16:37:16] 2024-04-26 14:36:59,927 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2024-04-26 16:37:16] 2024-04-26 14:36:59,951 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,951 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,951 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,953 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,953 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 16:37:16] 2024-04-26 14:36:59,953 | INFO     | job 6184304066 has completed (purged errors)
[2024-04-26 16:37:16] 2024-04-26 14:36:59,953 | INFO     | overall cleanup function is called
[2024-04-26 16:37:16] 2024-04-26 14:37:00,960 | INFO     | --- collectZombieJob: --- 10, [3540128]
[2024-04-26 16:37:16] 2024-04-26 14:37:00,960 | INFO     | zombie collector waiting for pid 3540128
[2024-04-26 16:37:16] 2024-04-26 14:37:00,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 16:37:16] 2024-04-26 14:37:01,965 | INFO     | collected zombie processes
[2024-04-26 16:37:16] 2024-04-26 14:37:01,965 | INFO     | will now attempt to kill all subprocesses of pid=3540128
[2024-04-26 16:37:16] 2024-04-26 14:37:02,114 | INFO     | process IDs to be killed: [3540128] (in reverse order)
[2024-04-26 16:37:16] 2024-04-26 14:37:02,221 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 16:37:16] 2024-04-26 14:37:02,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 16:37:16] 2024-04-26 14:37:02,228 | INFO     | did not find any defunct processes belonging to 3540128
[2024-04-26 16:37:16] 2024-04-26 14:37:02,234 | INFO     | did not find any defunct processes belonging to 3540128
[2024-04-26 16:37:16] 2024-04-26 14:37:02,234 | INFO     | ready for new job
[2024-04-26 16:37:16] 2024-04-26 14:37:02,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 16:37:16] 2024-04-26 14:37:02,236 | INFO     | *************************************
[2024-04-26 16:37:16] 2024-04-26 14:37:02,236 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 16:37:16] 2024-04-26 14:37:02,236 | INFO     | *************************************
[2024-04-26 16:37:16] 2024-04-26 14:37:02,236 | INFO     | 
[2024-04-26 16:37:16] 2024-04-26 14:37:02,239 | INFO     | architecture information:
[2024-04-26 16:37:16] 2024-04-26 14:37:02,239 | INFO     | executing command: cat /etc/os-release
[2024-04-26 16:37:16] 2024-04-26 14:37:02,255 | INFO     | cat /etc/os-release:
[2024-04-26 16:37:16] NAME="CentOS Linux"
[2024-04-26 16:37:16] VERSION="7 (Core)"
[2024-04-26 16:37:16] ID="centos"
[2024-04-26 16:37:16] ID_LIKE="rhel fedora"
[2024-04-26 16:37:16] VERSION_ID="7"
[2024-04-26 16:37:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 16:37:16] ANSI_COLOR="0;31"
[2024-04-26 16:37:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 16:37:16] HOME_URL="https://www.centos.org/"
[2024-04-26 16:37:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 16:37:16] 
[2024-04-26 16:37:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 16:37:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 16:37:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 16:37:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 16:37:16] 
[2024-04-26 16:37:16] 2024-04-26 14:37:02,255 | INFO     | *************************************
[2024-04-26 16:37:16] 2024-04-26 14:37:02,758 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2024-04-26 16:37:16] 2024-04-26 14:37:02,779 | INFO     | sufficient remaining disk space (620072271872 B)
[2024-04-26 16:37:16] 2024-04-26 14:37:02,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 16:37:16] 2024-04-26 14:37:02,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 16:37:16] 2024-04-26 14:37:02,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 16:37:16] 2024-04-26 14:37:02,780 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 16:37:16] 2024-04-26 14:37:02,780 | INFO     | aborting loop
[2024-04-26 16:37:16] 2024-04-26 14:37:02,780 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 16:37:16] 2024-04-26 14:37:02,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 16:37:16] 2024-04-26 14:37:02,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 16:37:16] 2024-04-26 14:37:02,811 | INFO     | all payload control threads have been joined
[2024-04-26 16:37:16] 2024-04-26 14:37:02,883 | INFO     | all data control threads have been joined
[2024-04-26 16:37:16] 2024-04-26 14:37:03,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 16:37:16] 2024-04-26 14:37:03,284 | INFO     | all job control threads have been joined
[2024-04-26 16:37:16] 2024-04-26 14:37:03,784 | INFO     | [job] retrieve thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:03,786 | INFO     | [job] job monitor thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:03,816 | INFO     | [payload] control thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:03,844 | INFO     | [job] validate thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:03,886 | INFO     | [data] control thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:04,100 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:04,289 | INFO     | [job] control thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:04,356 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:04,414 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:04,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 16:37:16] 2024-04-26 14:37:04,781 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:04,833 | INFO     | [data] copytool_in thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:05,200 | INFO     | [data] copytool_out thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:05,210 | INFO     | [payload] validate_post thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:05,212 | INFO     | [payload] failed_post thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:05,507 | INFO     | [job] queue monitor thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:05,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 16:37:16] 2024-04-26 14:37:09,526 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 16:37:16] 2024-04-26 14:37:11,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47554346189888)>', '<ExcThread(monitor, started 47554517423872)>']
[2024-04-26 16:37:16] 2024-04-26 14:37:11,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 16:37:16] 2024-04-26 14:37:11,826 | INFO     | [monitor] control thread has ended
[2024-04-26 16:37:16] 2024-04-26 14:37:16,055 | INFO     | all workflow threads have been joined
[2024-04-26 16:37:16] 2024-04-26 14:37:16,055 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 16:37:16] 2024-04-26 14:37:16,055 | INFO     | traces error code: 0
[2024-04-26 16:37:16] 2024-04-26 14:37:16,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 16:37:16] 2024-04-26 14:37:16,128 [wrapper] ==== pilot stdout END ====
[2024-04-26 16:37:16] 2024-04-26 14:37:16,131 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 16:37:16] 2024-04-26 14:37:16,133 [wrapper] pilotpid: 3532961
[2024-04-26 16:37:16] 2024-04-26 14:37:16,135 [wrapper] Pilot exit status: 0
[2024-04-26 16:37:16] 2024-04-26 14:37:16,143 [wrapper] pandaids: 6184304066
[2024-04-26 16:37:16] 2024-04-26 14:37:16,219 [wrapper] cleanup: SIGTERM to supervisor_pilot 4133147 3532962
[2024-04-26 16:37:16] 2024-04-26 14:37:16,221 [wrapper] Test setup, not cleaning
[2024-04-26 16:37:16] 2024-04-26 14:37:16,223 [wrapper] ==== wrapper stdout END ====
[2024-04-26 16:37:16] 2024-04-26 14:37:16,225 [wrapper] ==== wrapper stderr END ====
[2024-04-26 16:37:16] 2024-04-26 14:37:16,229 [wrapper] apfmon messages muted
[2024-04-26 16:37:16]  *** Error codes and diagnostics ***
[2024-04-26 16:37:16]     "exeErrorCode": 0,
[2024-04-26 16:37:16]     "exeErrorDiag": "",
[2024-04-26 16:37:16]     "pilotErrorCode": 0,
[2024-04-26 16:37:16]     "pilotErrorDiag": "",
[2024-04-26 16:37:16]  *** Listing of results directory ***
[2024-04-26 16:37:17] total 616116
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc    462745 Apr 23 15:59 pilot3.tar.gz
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc      6720 Apr 23 16:19 queuedata.json
[2024-04-26 16:37:17] -rwx------ 1 boinc boinc     32211 Apr 23 16:22 runpilot2-wrapper.sh
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc       100 Apr 26 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 16:37:17] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 13:10 run_atlas
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc       105 Apr 26 13:10 job.xml
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc      6663 Apr 26 13:10 init_data.xml
[2024-04-26 16:37:17] -rw-r--r-- 2 boinc boinc 451603884 Apr 26 13:10 EVNT.38204277._000830.pool.root.1
[2024-04-26 16:37:17] -rw-r--r-- 2 boinc boinc     17537 Apr 26 13:10 start_atlas.sh
[2024-04-26 16:37:17] drwxrwx--x 2 boinc boinc      4096 Apr 26 13:10 shared
[2024-04-26 16:37:17] -rw-r--r-- 2 boinc boinc    474799 Apr 26 13:10 input.tar.gz
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc         0 Apr 26 13:10 boinc_lockfile
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc      2583 Apr 26 13:10 pandaJob.out
[2024-04-26 16:37:17] -rw------- 1 boinc boinc       424 Apr 26 13:10 setup.sh.local
[2024-04-26 16:37:17] -rw------- 1 boinc boinc    993600 Apr 26 13:11 agis_schedconf.cvmfs.json
[2024-04-26 16:37:17] -rw------- 1 boinc boinc   1315307 Apr 26 13:11 cric_ddmendpoints.json
[2024-04-26 16:37:17] drwx------ 4 boinc boinc      4096 Apr 26 13:11 pilot3
[2024-04-26 16:37:17] -rw------- 1 boinc boinc 172847005 Apr 26 16:36 HITS.38204279._023918.pool.root.1
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc       531 Apr 26 16:36 boinc_task_state.xml
[2024-04-26 16:37:17] -rw------- 1 boinc boinc        95 Apr 26 16:36 pilot_heartbeat.json
[2024-04-26 16:37:17] -rw------- 1 boinc boinc      1048 Apr 26 16:36 memory_monitor_summary.json
[2024-04-26 16:37:17] -rw------- 1 boinc boinc         0 Apr 26 16:36 agis_ddmendpoints.agis.ALL.json
[2024-04-26 16:37:17] -rw------- 1 boinc boinc    311875 Apr 26 16:36 log.38204279._023918.job.log.tgz.1
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc      8192 Apr 26 16:36 boinc_mmap_file
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc        28 Apr 26 16:36 wrapper_checkpoint.txt
[2024-04-26 16:37:17] -rw------- 1 boinc boinc      7749 Apr 26 16:36 heartbeat.json
[2024-04-26 16:37:17] -rw------- 1 boinc boinc      4344 Apr 26 16:37 pilotlog.txt
[2024-04-26 16:37:17] -rw------- 1 boinc boinc   1170854 Apr 26 16:37 log.38204279._023918.job.log.1
[2024-04-26 16:37:17] -rw------- 1 boinc boinc       357 Apr 26 16:37 output.list
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc       620 Apr 26 16:37 runtime_log
[2024-04-26 16:37:17] -rw------- 1 boinc boinc   1505280 Apr 26 16:37 result.tar.gz
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc     11410 Apr 26 16:37 runtime_log.err
[2024-04-26 16:37:17] -rw------- 1 boinc boinc       657 Apr 26 16:37 4JlLDmXDWJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDmemPKDmaTH5qn.diag
[2024-04-26 16:37:17] -rw-r--r-- 1 boinc boinc     21091 Apr 26 16:37 stderr.txt
[2024-04-26 16:37:17] HITS file was successfully produced:
[2024-04-26 16:37:17] -rw------- 1 boinc boinc 172847005 Apr 26 16:36 shared/HITS.pool.root.1
[2024-04-26 16:37:17]  *** Contents of shared directory: ***
[2024-04-26 16:37:17] total 611780
[2024-04-26 16:37:17] -rw-r--r-- 2 boinc boinc 451603884 Apr 26 13:10 ATLAS.root_0
[2024-04-26 16:37:17] -rw-r--r-- 2 boinc boinc     17537 Apr 26 13:10 start_atlas.sh
[2024-04-26 16:37:17] -rw-r--r-- 2 boinc boinc    474799 Apr 26 13:10 input.tar.gz
[2024-04-26 16:37:17] -rw------- 1 boinc boinc 172847005 Apr 26 16:36 HITS.pool.root.1
[2024-04-26 16:37:17] -rw------- 1 boinc boinc   1505280 Apr 26 16:37 result.tar.gz
16:37:18 (3528586): run_atlas exited; CPU time 46375.539378
16:37:18 (3528586): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN