Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:22:45 (3049966): wrapper (7.7.26015): starting
15:22:45 (3049966): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 15:22:45] Arguments: --nthreads 4
[2024-04-26 15:22:45] Threads: 4
[2024-04-26 15:22:45] Checking for CVMFS
[2024-04-26 15:22:45] No cvmfs_config command found, will try listing directly
[2024-04-26 15:22:45] CVMFS is ok
[2024-04-26 15:22:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 15:22:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 15:22:45] Further information can be found at the LHC@home message board.
[2024-04-26 15:22:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 15:22:45] Checking for apptainer binary...
[2024-04-26 15:22:45] which: no apptainer in ((null))
[2024-04-26 15:22:45] apptainer is not installed, using version from CVMFS
[2024-04-26 15:22:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 15:22:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-04-26 15:22:46] apptainer works
[2024-04-26 15:22:46] Set ATHENA_PROC_NUMBER=4
[2024-04-26 15:22:46] Set ATHENA_CORE_NUMBER=4
[2024-04-26 15:22:46] Starting ATLAS job with PandaID=6183943295
[2024-04-26 15:22:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 18:26:43]  *** The last 200 lines of the pilot log: ***
[2024-04-26 18:26:43]  ddm_activity=['write_lan', 'write_wan']
[2024-04-26 18:26:43]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-26 18:26:43]  direct_access_lan=False
[2024-04-26 18:26:43]  direct_access_wan=False
[2024-04-26 18:26:43]  domain=
[2024-04-26 18:26:43]  filesize=301195
[2024-04-26 18:26:43]  filetype=log
[2024-04-26 18:26:43]  guid=1e5800a1-bf6d-4966-8642-897295d89266
[2024-04-26 18:26:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 18:26:43]  is_tar=False
[2024-04-26 18:26:43]  lfn=log.38204359._004254.job.log.tgz.1
[2024-04-26 18:26:43]  mtime=0
[2024-04-26 18:26:43]  protocol_id=None
[2024-04-26 18:26:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 18:26:43]  replicas=None
[2024-04-26 18:26:43]  scope=mc23_13p6TeV
[2024-04-26 18:26:43]  status=None
[2024-04-26 18:26:43]  status_code=0
[2024-04-26 18:26:43]  storage_token=
[2024-04-26 18:26:43]  surl=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6183943295/log.38204359._004254.job.log.tgz.1
[2024-04-26 18:26:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/e7/log.38204359._004254.job.log.tgz.1
[2024-04-26 18:26:43]  workdir=None
[2024-04-26 18:26:43] ]
[2024-04-26 18:26:43] 2024-04-26 16:26:14,811 | INFO     | transferring file log.38204359._004254.job.log.tgz.1 from /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6183943295/log.38204359._004254.job.log.tgz.1 to /scratch/b
[2024-04-26 18:26:43] 2024-04-26 16:26:14,811 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6183943295/log.38204359._004254.job.log.tgz.1 /scratch/boinc/var/slot32/slots/0/lo
[2024-04-26 18:26:43] 2024-04-26 16:26:14,827 | INFO     | adding to output.list: log.38204359._004254.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/e7/log.38204359._004254.job.log.tg
[2024-04-26 18:26:43] 2024-04-26 16:26:14,828 | INFO     | summary of transferred files:
[2024-04-26 18:26:43] 2024-04-26 16:26:14,828 | INFO     |  -- lfn=log.38204359._004254.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 18:26:43] 2024-04-26 16:26:14,828 | INFO     | stage-out finished correctly
[2024-04-26 18:26:43] 2024-04-26 16:26:15,771 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 18:26:43] 2024-04-26 16:26:18,631 | INFO     | job 6183943295 has state=finished
[2024-04-26 18:26:43] 2024-04-26 16:26:18,631 | INFO     | preparing for final server update for job 6183943295 in state='finished'
[2024-04-26 18:26:43] 2024-04-26 16:26:18,631 | INFO     | this job has now completed (state=finished)
[2024-04-26 18:26:43] 2024-04-26 16:26:18,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 18:26:43] 2024-04-26 16:26:18,632 | INFO     | job 6183943295 has finished - writing final server update
[2024-04-26 18:26:43] 2024-04-26 16:26:18,632 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3028944/.job.ad'
[2024-04-26 18:26:43] 2024-04-26 16:26:18,632 | INFO     | total number of processed events: 400 (read)
[2024-04-26 18:26:43] 2024-04-26 16:26:18,636 | INFO     | executing command: lscpu
[2024-04-26 18:26:43] 2024-04-26 16:26:18,685 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 18:26:43] 2024-04-26 16:26:18,686 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 18:26:43] 2024-04-26 16:26:18,857 | WARNING  | process 3061561 is no longer using CPU - aborting
[2024-04-26 18:26:43] 2024-04-26 16:26:18,858 | INFO     | will not send any job update
[2024-04-26 18:26:43] 2024-04-26 16:26:18,872 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 18:26:43] 2024-04-26 16:26:21,361 | INFO     | monitor loop #844: job 0:6183943295 is in state 'finished'
[2024-04-26 18:26:43] 2024-04-26 16:26:21,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,908 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 18:26:43] 2024-04-26 16:26:21,908 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6183943295/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,909 | INFO     | extracted standard info from prmon json
[2024-04-26 18:26:43] 2024-04-26 16:26:21,909 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 18:26:43] 2024-04-26 16:26:21,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 18:26:43] 2024-04-26 16:26:21,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 18:26:43] 2024-04-26 16:26:21,911 | INFO     | fitting pss+swap vs Time
[2024-04-26 18:26:43] 2024-04-26 16:26:21,913 | INFO     | current chi2=3.8029552365642965 (change=-0.15287952682183292 %)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,913 | INFO     | right removable region: 174
[2024-04-26 18:26:43] 2024-04-26 16:26:21,913 | INFO     | current chi2=1.474578374725581 (change=61.166182316106 %)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,914 | INFO     | current chi2=0.24709983191536183 (change=83.24267898196004 %)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,915 | INFO     | current chi2=0.1914658038538857 (change=22.51479801917965 %)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,915 | INFO     | left removable region: 30
[2024-04-26 18:26:43] 2024-04-26 16:26:21,915 | INFO     | current memory leak: -15.20 B/s (using 144 data points, chi2=0.14)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | ..............................
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | . Timing measurements:
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | . get job = 0 s
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | . initial setup = 1 s
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | . payload setup = 7 s
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | . stage-in = 0 s
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | . payload execution = 10969 s
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | . stage-out = 0 s
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | . log creation = 0 s
[2024-04-26 18:26:43] 2024-04-26 16:26:21,916 | INFO     | ..............................
[2024-04-26 18:26:43] 2024-04-26 16:26:21,968 | INFO     | 
[2024-04-26 18:26:43] 2024-04-26 16:26:21,968 | INFO     | job summary report
[2024-04-26 18:26:43] 2024-04-26 16:26:21,968 | INFO     | --------------------------------------------------
[2024-04-26 18:26:43] 2024-04-26 16:26:21,968 | INFO     | PanDA job id: 6183943295
[2024-04-26 18:26:43] 2024-04-26 16:26:21,968 | INFO     | task id: 38204359
[2024-04-26 18:26:43] 2024-04-26 16:26:21,968 | INFO     | errors: (none)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,968 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 18:26:43] 2024-04-26 16:26:21,968 | INFO     | pilot state: finished 
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | transexitcode: 0
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | exeerrorcode: 0
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | exeerrordiag: 
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | exitcode: 0
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | exitmsg: OK
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | cpuconsumptiontime: 41044 s
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | nevents: 400
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | neventsw: 0
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | pid: 3061561
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | pgrp: 3061561
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | corecount: 4
[2024-04-26 18:26:43] 2024-04-26 16:26:21,969 | INFO     | event service: False
[2024-04-26 18:26:43] 2024-04-26 16:26:21,970 | INFO     | sizes: {0: 2375683, 5: 2375889, 11: 2375945, 10980: 2404908, 10981: 2413890, 10982: 2413946, 10988: 2414244}
[2024-04-26 18:26:43] 2024-04-26 16:26:21,970 | INFO     | --------------------------------------------------
[2024-04-26 18:26:43] 2024-04-26 16:26:21,970 | INFO     | 
[2024-04-26 18:26:43] 2024-04-26 16:26:21,970 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-04-26 18:26:43] 2024-04-26 16:26:21,992 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,992 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,994 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,994 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 18:26:43] 2024-04-26 16:26:21,994 | INFO     | job 6183943295 has completed (purged errors)
[2024-04-26 18:26:43] 2024-04-26 16:26:21,994 | INFO     | overall cleanup function is called
[2024-04-26 18:26:43] 2024-04-26 16:26:23,002 | INFO     | --- collectZombieJob: --- 10, [3061561]
[2024-04-26 18:26:43] 2024-04-26 16:26:23,002 | INFO     | zombie collector waiting for pid 3061561
[2024-04-26 18:26:43] 2024-04-26 16:26:23,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 18:26:43] 2024-04-26 16:26:24,007 | INFO     | collected zombie processes
[2024-04-26 18:26:43] 2024-04-26 16:26:24,007 | INFO     | will now attempt to kill all subprocesses of pid=3061561
[2024-04-26 18:26:43] 2024-04-26 16:26:24,198 | INFO     | process IDs to be killed: [3061561] (in reverse order)
[2024-04-26 18:26:43] 2024-04-26 16:26:24,305 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 18:26:43] 2024-04-26 16:26:24,305 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 18:26:43] 2024-04-26 16:26:24,311 | INFO     | did not find any defunct processes belonging to 3061561
[2024-04-26 18:26:43] 2024-04-26 16:26:24,317 | INFO     | did not find any defunct processes belonging to 3061561
[2024-04-26 18:26:43] 2024-04-26 16:26:24,317 | INFO     | ready for new job
[2024-04-26 18:26:43] 2024-04-26 16:26:24,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 18:26:43] 2024-04-26 16:26:24,318 | INFO     | *************************************
[2024-04-26 18:26:43] 2024-04-26 16:26:24,318 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 18:26:43] 2024-04-26 16:26:24,318 | INFO     | *************************************
[2024-04-26 18:26:43] 2024-04-26 16:26:24,318 | INFO     | 
[2024-04-26 18:26:43] 2024-04-26 16:26:24,321 | INFO     | architecture information:
[2024-04-26 18:26:43] 2024-04-26 16:26:24,321 | INFO     | executing command: cat /etc/os-release
[2024-04-26 18:26:43] 2024-04-26 16:26:24,335 | INFO     | cat /etc/os-release:
[2024-04-26 18:26:43] NAME="CentOS Linux"
[2024-04-26 18:26:43] VERSION="7 (Core)"
[2024-04-26 18:26:43] ID="centos"
[2024-04-26 18:26:43] ID_LIKE="rhel fedora"
[2024-04-26 18:26:43] VERSION_ID="7"
[2024-04-26 18:26:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 18:26:43] ANSI_COLOR="0;31"
[2024-04-26 18:26:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 18:26:43] HOME_URL="https://www.centos.org/"
[2024-04-26 18:26:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 18:26:43] 
[2024-04-26 18:26:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 18:26:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 18:26:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 18:26:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 18:26:43] 
[2024-04-26 18:26:43] 2024-04-26 16:26:24,335 | INFO     | *************************************
[2024-04-26 18:26:43] 2024-04-26 16:26:24,838 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-04-26 18:26:43] 2024-04-26 16:26:24,858 | INFO     | sufficient remaining disk space (625653841920 B)
[2024-04-26 18:26:43] 2024-04-26 16:26:24,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 18:26:43] 2024-04-26 16:26:24,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 18:26:43] 2024-04-26 16:26:24,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 18:26:43] 2024-04-26 16:26:24,869 | INFO     | aborting loop
[2024-04-26 18:26:43] 2024-04-26 16:26:25,367 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 18:26:43] 2024-04-26 16:26:25,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 18:26:43] 2024-04-26 16:26:25,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 18:26:43] 2024-04-26 16:26:25,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 18:26:43] 2024-04-26 16:26:25,485 | INFO     | all data control threads have been joined
[2024-04-26 18:26:43] 2024-04-26 16:26:25,554 | INFO     | all payload control threads have been joined
[2024-04-26 18:26:43] 2024-04-26 16:26:25,604 | INFO     | all job control threads have been joined
[2024-04-26 18:26:43] 2024-04-26 16:26:25,863 | INFO     | [job] retrieve thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:25,874 | INFO     | [job] job monitor thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:25,998 | INFO     | [data] copytool_in thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:26,063 | INFO     | [payload] validate_post thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:26,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 18:26:43] 2024-04-26 16:26:26,490 | INFO     | [data] control thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:26,559 | INFO     | [payload] control thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:26,609 | INFO     | [job] control thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:26,622 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:26,725 | INFO     | [job] validate thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:26,794 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:26,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 18:26:43] 2024-04-26 16:26:27,029 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:27,398 | INFO     | [data] copytool_out thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:27,401 | INFO     | [payload] failed_post thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:27,983 | INFO     | [job] queue monitor thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:30,374 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:35,134 | INFO     | job.realtimelogging is not enabled
[2024-04-26 18:26:43] 2024-04-26 16:26:36,139 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 18:26:43] 2024-04-26 16:26:37,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47847488431168)>', '<ExcThread(monitor, started 47847659665152)>']
[2024-04-26 18:26:43] 2024-04-26 16:26:38,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 18:26:43] 2024-04-26 16:26:38,433 | INFO     | [monitor] control thread has ended
[2024-04-26 18:26:43] 2024-04-26 16:26:42,541 | INFO     | all workflow threads have been joined
[2024-04-26 18:26:43] 2024-04-26 16:26:42,541 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 18:26:43] 2024-04-26 16:26:42,541 | INFO     | traces error code: 0
[2024-04-26 18:26:43] 2024-04-26 16:26:42,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 18:26:43] 2024-04-26 16:26:42,624 [wrapper] ==== pilot stdout END ====
[2024-04-26 18:26:43] 2024-04-26 16:26:42,626 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 18:26:43] 2024-04-26 16:26:42,628 [wrapper] pilotpid: 3054404
[2024-04-26 18:26:43] 2024-04-26 16:26:42,630 [wrapper] Pilot exit status: 0
[2024-04-26 18:26:43] 2024-04-26 16:26:42,638 [wrapper] pandaids: 6183943295
[2024-04-26 18:26:43] 2024-04-26 16:26:42,701 [wrapper] cleanup: SIGTERM to supervisor_pilot 3629706 3054405
[2024-04-26 18:26:43] 2024-04-26 16:26:42,703 [wrapper] Test setup, not cleaning
[2024-04-26 18:26:43] 2024-04-26 16:26:42,706 [wrapper] ==== wrapper stdout END ====
[2024-04-26 18:26:43] 2024-04-26 16:26:42,708 [wrapper] ==== wrapper stderr END ====
[2024-04-26 18:26:43] 2024-04-26 16:26:42,711 [wrapper] apfmon messages muted
[2024-04-26 18:26:43]  *** Error codes and diagnostics ***
[2024-04-26 18:26:43]     "exeErrorCode": 0,
[2024-04-26 18:26:43]     "exeErrorDiag": "",
[2024-04-26 18:26:43]     "pilotErrorCode": 0,
[2024-04-26 18:26:43]     "pilotErrorDiag": "",
[2024-04-26 18:26:43]  *** Listing of results directory ***
[2024-04-26 18:26:43] total 703144
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc    462745 Apr 23 02:30 pilot3.tar.gz
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc      6720 Apr 23 02:44 queuedata.json
[2024-04-26 18:26:43] -rwx------ 1 boinc boinc     32211 Apr 23 02:45 runpilot2-wrapper.sh
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc       100 Apr 26 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 18:26:43] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 15:22 run_atlas
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc       105 Apr 26 15:22 job.xml
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc      6663 Apr 26 15:22 init_data.xml
[2024-04-26 18:26:43] -rw-r--r-- 2 boinc boinc 517662880 Apr 26 15:22 EVNT.38204357._000003.pool.root.1
[2024-04-26 18:26:43] -rw-r--r-- 2 boinc boinc     17537 Apr 26 15:22 start_atlas.sh
[2024-04-26 18:26:43] drwxrwx--x 2 boinc boinc      4096 Apr 26 15:22 shared
[2024-04-26 18:26:43] -rw-r--r-- 2 boinc boinc    474814 Apr 26 15:22 input.tar.gz
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc         0 Apr 26 15:22 boinc_lockfile
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc      2620 Apr 26 15:22 pandaJob.out
[2024-04-26 18:26:43] -rw------- 1 boinc boinc       424 Apr 26 15:22 setup.sh.local
[2024-04-26 18:26:43] -rw------- 1 boinc boinc    997829 Apr 26 15:22 agis_schedconf.cvmfs.json
[2024-04-26 18:26:43] -rw------- 1 boinc boinc   1315307 Apr 26 15:22 cric_ddmendpoints.json
[2024-04-26 18:26:43] drwx------ 4 boinc boinc      4096 Apr 26 15:22 pilot3
[2024-04-26 18:26:43] -rw------- 1 boinc boinc        95 Apr 26 18:25 pilot_heartbeat.json
[2024-04-26 18:26:43] -rw------- 1 boinc boinc 196169228 Apr 26 18:25 HITS.38204359._004254.pool.root.1
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc       531 Apr 26 18:25 boinc_task_state.xml
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc      8192 Apr 26 18:26 boinc_mmap_file
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc        28 Apr 26 18:26 wrapper_checkpoint.txt
[2024-04-26 18:26:43] -rw------- 1 boinc boinc      1062 Apr 26 18:26 memory_monitor_summary.json
[2024-04-26 18:26:43] -rw------- 1 boinc boinc         0 Apr 26 18:26 agis_ddmendpoints.agis.ALL.json
[2024-04-26 18:26:43] -rw------- 1 boinc boinc    301195 Apr 26 18:26 log.38204359._004254.job.log.tgz.1
[2024-04-26 18:26:43] -rw------- 1 boinc boinc      7742 Apr 26 18:26 heartbeat.json
[2024-04-26 18:26:43] -rw------- 1 boinc boinc      4293 Apr 26 18:26 pilotlog.txt
[2024-04-26 18:26:43] -rw------- 1 boinc boinc   1047043 Apr 26 18:26 log.38204359._004254.job.log.1
[2024-04-26 18:26:43] -rw------- 1 boinc boinc       357 Apr 26 18:26 output.list
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc       620 Apr 26 18:26 runtime_log
[2024-04-26 18:26:43] -rw------- 1 boinc boinc   1372160 Apr 26 18:26 result.tar.gz
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc     11410 Apr 26 18:26 runtime_log.err
[2024-04-26 18:26:43] -rw------- 1 boinc boinc       658 Apr 26 18:26 MlQNDmhSJJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDmkvOKDmX4uyXo.diag
[2024-04-26 18:26:43] -rw-r--r-- 1 boinc boinc     20841 Apr 26 18:26 stderr.txt
[2024-04-26 18:26:43] HITS file was successfully produced:
[2024-04-26 18:26:43] -rw------- 1 boinc boinc 196169228 Apr 26 18:25 shared/HITS.pool.root.1
[2024-04-26 18:26:43]  *** Contents of shared directory: ***
[2024-04-26 18:26:43] total 698936
[2024-04-26 18:26:43] -rw-r--r-- 2 boinc boinc 517662880 Apr 26 15:22 ATLAS.root_0
[2024-04-26 18:26:43] -rw-r--r-- 2 boinc boinc     17537 Apr 26 15:22 start_atlas.sh
[2024-04-26 18:26:43] -rw-r--r-- 2 boinc boinc    474814 Apr 26 15:22 input.tar.gz
[2024-04-26 18:26:43] -rw------- 1 boinc boinc 196169228 Apr 26 18:25 HITS.pool.root.1
[2024-04-26 18:26:43] -rw------- 1 boinc boinc   1372160 Apr 26 18:26 result.tar.gz
18:26:44 (3049966): run_atlas exited; CPU time 40789.251672
18:26:44 (3049966): called boinc_finish(0)

</stderr_txt>
]]>

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