Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
23:39:14 (126145): wrapper (7.7.26015): starting
23:39:14 (126145): wrapper: running run_atlas (--nthreads 4)
[2024-04-28 23:39:14] Arguments: --nthreads 4
[2024-04-28 23:39:14] Threads: 4
[2024-04-28 23:39:14] Checking for CVMFS
[2024-04-28 23:39:14] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-28 23:39:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-28 23:39:15] Running cvmfs_config stat atlas.cern.ch
[2024-04-28 23:39:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-28 23:39:16] 2.10.0.0 19902 247 48144 132147 1 12 6010384 10240000 904 130560 0 384314 99.990 87679 4002 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2024-04-28 23:39:16] CVMFS is ok
[2024-04-28 23:39:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-28 23:39:16] Checking for apptainer binary...
[2024-04-28 23:39:16] Using apptainer found in PATH at /usr/bin/apptainer
[2024-04-28 23:39:16] Running /usr/bin/apptainer --version
[2024-04-28 23:39:16] apptainer version 1.1.0-rc.2
[2024-04-28 23:39:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-28 23:39:16] atlas6l1
[2024-04-28 23:39:16] apptainer works
[2024-04-28 23:39:16] Set ATHENA_PROC_NUMBER=4
[2024-04-28 23:39:16] Set ATHENA_CORE_NUMBER=4
[2024-04-28 23:39:16] Starting ATLAS job with PandaID=6183498888
[2024-04-28 23:39:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-29 01:49:05]  *** The last 200 lines of the pilot log: ***
[2024-04-29 01:49:05]  ddm_activity=['write_lan', 'write_wan']
[2024-04-29 01:49:05]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-29 01:49:05]  direct_access_lan=False
[2024-04-29 01:49:05]  direct_access_wan=False
[2024-04-29 01:49:05]  domain=
[2024-04-29 01:49:05]  filesize=281753
[2024-04-29 01:49:05]  filetype=log
[2024-04-29 01:49:05]  guid=dd543972-23f0-4478-a4af-ec19b99d5500
[2024-04-29 01:49:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-29 01:49:05]  is_tar=False
[2024-04-29 01:49:05]  lfn=log.38222094._000223.job.log.tgz.1
[2024-04-29 01:49:05]  mtime=0
[2024-04-29 01:49:05]  protocol_id=None
[2024-04-29 01:49:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-29 01:49:05]  replicas=None
[2024-04-29 01:49:05]  scope=mc23_13p6TeV
[2024-04-29 01:49:05]  status=None
[2024-04-29 01:49:05]  status_code=0
[2024-04-29 01:49:05]  storage_token=
[2024-04-29 01:49:05]  surl=/var/lib/boinc_data/boinc-01/slots/7/PanDA_Pilot-6183498888/log.38222094._000223.job.log.tgz.1
[2024-04-29 01:49:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/b7/log.38222094._000223.job.log.tgz.1
[2024-04-29 01:49:05]  workdir=None
[2024-04-29 01:49:05] ]
[2024-04-29 01:49:05] 2024-04-28 23:48:40,010 | INFO     | transferring file log.38222094._000223.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/7/PanDA_Pilot-6183498888/log.38222094._000223.job.log.tgz.1 to /var/li
[2024-04-29 01:49:05] 2024-04-28 23:48:40,010 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/7/PanDA_Pilot-6183498888/log.38222094._000223.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2024-04-29 01:49:05] 2024-04-28 23:48:40,029 | INFO     | adding to output.list: log.38222094._000223.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/b7/log.38222094._000223.job.log.tg
[2024-04-29 01:49:05] 2024-04-28 23:48:40,031 | INFO     | summary of transferred files:
[2024-04-29 01:49:05] 2024-04-28 23:48:40,031 | INFO     |  -- lfn=log.38222094._000223.job.log.tgz.1, status_code=0, status=transferred
[2024-04-29 01:49:05] 2024-04-28 23:48:40,031 | INFO     | stage-out finished correctly
[2024-04-29 01:49:05] 2024-04-28 23:48:40,289 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-29 01:49:05] 2024-04-28 23:48:40,637 | INFO     | job 6183498888 has state=finished
[2024-04-29 01:49:05] 2024-04-28 23:48:40,637 | INFO     | preparing for final server update for job 6183498888 in state='finished'
[2024-04-29 01:49:05] 2024-04-28 23:48:40,638 | INFO     | this job has now completed (state=finished)
[2024-04-29 01:49:05] 2024-04-28 23:48:40,638 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-29 01:49:05] 2024-04-28 23:48:40,638 | INFO     | job 6183498888 has finished - writing final server update
[2024-04-29 01:49:05] 2024-04-28 23:48:40,639 | INFO     | total number of processed events: 400 (read)
[2024-04-29 01:49:05] 2024-04-28 23:48:40,641 | INFO     | executing command: lscpu
[2024-04-29 01:49:05] 2024-04-28 23:48:40,661 | INFO     | found 16 cores (1 cores per socket, 16 sockets)
[2024-04-29 01:49:05] 2024-04-28 23:48:40,662 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-29 01:49:05] 2024-04-28 23:48:40,686 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-29 01:49:05] 2024-04-28 23:48:40,748 | INFO     | monitor loop #616: job 0:6183498888 is in state 'finished'
[2024-04-29 01:49:05] 2024-04-28 23:48:40,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-29 01:49:05] 2024-04-28 23:48:43,252 | INFO     | monitor loop #617: job 0:6183498888 is in state 'finished'
[2024-04-29 01:49:05] 2024-04-28 23:48:43,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-29 01:49:05] 2024-04-28 23:48:45,731 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-29 01:49:05] 2024-04-28 23:48:45,732 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/7/PanDA_Pilot-6183498888/memory_monitor_summary.json (trf name=prmon)
[2024-04-29 01:49:05] 2024-04-28 23:48:45,732 | INFO     | extracted standard info from prmon json
[2024-04-29 01:49:05] 2024-04-28 23:48:45,732 | INFO     | extracted standard memory fields from prmon json
[2024-04-29 01:49:05] 2024-04-28 23:48:45,733 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-29 01:49:05] 2024-04-28 23:48:45,733 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-29 01:49:05] 2024-04-28 23:48:45,734 | INFO     | fitting pss+swap vs Time
[2024-04-29 01:49:05] 2024-04-28 23:48:45,735 | INFO     | current chi2=2.0987637352099653 (change=-0.05546782279687607 %)
[2024-04-29 01:49:05] 2024-04-28 23:48:45,735 | INFO     | right removable region: 121
[2024-04-29 01:49:05] 2024-04-28 23:48:45,735 | INFO     | current chi2=0.23465046390624297 (change=88.81338497178356 %)
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | current chi2=0.22776807941308103 (change=2.933036815095271 %)
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | left removable region: 20
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | current memory leak: -33.20 B/s (using 101 data points, chi2=0.16)
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | ..............................
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | . Timing measurements:
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | . get job = 0 s
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | . initial setup = 1 s
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | . payload setup = 3 s
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | . stage-in = 0 s
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | . payload execution = 7734 s
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | . stage-out = 0 s
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | . log creation = 0 s
[2024-04-29 01:49:05] 2024-04-28 23:48:45,736 | INFO     | ..............................
[2024-04-29 01:49:05] 2024-04-28 23:48:46,080 | INFO     | 
[2024-04-29 01:49:05] 2024-04-28 23:48:46,080 | INFO     | job summary report
[2024-04-29 01:49:05] 2024-04-28 23:48:46,080 | INFO     | --------------------------------------------------
[2024-04-29 01:49:05] 2024-04-28 23:48:46,080 | INFO     | PanDA job id: 6183498888
[2024-04-29 01:49:05] 2024-04-28 23:48:46,080 | INFO     | task id: 38222094
[2024-04-29 01:49:05] 2024-04-28 23:48:46,080 | INFO     | errors: (none)
[2024-04-29 01:49:05] 2024-04-28 23:48:46,080 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | pilot state: finished 
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | transexitcode: 0
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | exeerrorcode: 0
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | exeerrordiag: 
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | exitcode: 0
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | exitmsg: OK
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | cpuconsumptiontime: 29492 s
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | nevents: 400
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | neventsw: 0
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | pid: 137343
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | pgrp: 137343
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | corecount: 4
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | event service: False
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | sizes: {0: 2375662, 3: 2375868, 11: 2375896, 7741: 2412489, 7742: 2412489, 7747: 2412659}
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | --------------------------------------------------
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | 
[2024-04-29 01:49:05] 2024-04-28 23:48:46,081 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/7
[2024-04-29 01:49:05] 2024-04-28 23:48:46,094 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,095 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,095 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,095 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,097 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-29 01:49:05] 2024-04-28 23:48:46,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,097 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-29 01:49:05] 2024-04-28 23:48:46,097 | INFO     | job 6183498888 has completed (purged errors)
[2024-04-29 01:49:05] 2024-04-28 23:48:46,097 | INFO     | overall cleanup function is called
[2024-04-29 01:49:05] 2024-04-28 23:48:47,104 | INFO     | --- collectZombieJob: --- 10, [137343]
[2024-04-29 01:49:05] 2024-04-28 23:48:47,104 | INFO     | zombie collector waiting for pid 137343
[2024-04-29 01:49:05] 2024-04-28 23:48:47,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-29 01:49:05] 2024-04-28 23:48:48,110 | INFO     | collected zombie processes
[2024-04-29 01:49:05] 2024-04-28 23:48:48,110 | INFO     | will now attempt to kill all subprocesses of pid=137343
[2024-04-29 01:49:05] 2024-04-28 23:48:48,155 | INFO     | process IDs to be killed: [137343] (in reverse order)
[2024-04-29 01:49:05] 2024-04-28 23:48:48,190 | WARNING  | found no corresponding commands to process id(s)
[2024-04-29 01:49:05] 2024-04-28 23:48:48,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-29 01:49:05] 2024-04-28 23:48:48,195 | INFO     | did not find any defunct processes belonging to 137343
[2024-04-29 01:49:05] 2024-04-28 23:48:48,196 | INFO     | did not find any defunct processes belonging to 137343
[2024-04-29 01:49:05] 2024-04-28 23:48:48,196 | INFO     | ready for new job
[2024-04-29 01:49:05] 2024-04-28 23:48:48,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-29 01:49:05] 2024-04-28 23:48:48,197 | INFO     | *************************************
[2024-04-29 01:49:05] 2024-04-28 23:48:48,197 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-29 01:49:05] 2024-04-28 23:48:48,197 | INFO     | *************************************
[2024-04-29 01:49:05] 2024-04-28 23:48:48,197 | INFO     | 
[2024-04-29 01:49:05] 2024-04-28 23:48:48,198 | INFO     | pilot is running in a VM
[2024-04-29 01:49:05] 2024-04-28 23:48:48,198 | INFO     | architecture information:
[2024-04-29 01:49:05] 2024-04-28 23:48:48,198 | INFO     | executing command: cat /etc/os-release
[2024-04-29 01:49:05] 2024-04-28 23:48:48,209 | INFO     | cat /etc/os-release:
[2024-04-29 01:49:05] NAME="CentOS Linux"
[2024-04-29 01:49:05] VERSION="7 (Core)"
[2024-04-29 01:49:05] ID="centos"
[2024-04-29 01:49:05] ID_LIKE="rhel fedora"
[2024-04-29 01:49:05] VERSION_ID="7"
[2024-04-29 01:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-29 01:49:05] ANSI_COLOR="0;31"
[2024-04-29 01:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-29 01:49:05] HOME_URL="https://www.centos.org/"
[2024-04-29 01:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-29 01:49:05] 
[2024-04-29 01:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-29 01:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-29 01:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-29 01:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-29 01:49:05] 
[2024-04-29 01:49:05] 2024-04-28 23:48:48,209 | INFO     | *************************************
[2024-04-29 01:49:05] 2024-04-28 23:48:48,712 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/7
[2024-04-29 01:49:05] 2024-04-28 23:48:48,725 | INFO     | sufficient remaining disk space (65584234496 B)
[2024-04-29 01:49:05] 2024-04-28 23:48:48,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-29 01:49:05] 2024-04-28 23:48:48,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-29 01:49:05] 2024-04-28 23:48:48,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-29 01:49:05] 2024-04-28 23:48:48,726 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-29 01:49:05] 2024-04-28 23:48:48,727 | INFO     | found 0 job(s) in 20 queues
[2024-04-29 01:49:05] 2024-04-28 23:48:48,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-29 01:49:05] 2024-04-28 23:48:48,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-29 01:49:05] 2024-04-28 23:48:48,788 | INFO     | all data control threads have been joined
[2024-04-29 01:49:05] 2024-04-28 23:48:48,954 | INFO     | all payload control threads have been joined
[2024-04-29 01:49:05] 2024-04-28 23:48:49,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-29 01:49:05] 2024-04-28 23:48:49,266 | INFO     | aborting loop
[2024-04-29 01:49:05] 2024-04-28 23:48:49,728 | INFO     | [job] retrieve thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:49,792 | INFO     | all job control threads have been joined
[2024-04-29 01:49:05] 2024-04-28 23:48:49,793 | INFO     | [data] control thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:49,959 | INFO     | [payload] control thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,086 | INFO     | [job] create_data_payload thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,090 | INFO     | [job] validate thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,092 | INFO     | [payload] validate_post thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,202 | INFO     | [payload] validate_pre thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,270 | INFO     | [job] job monitor thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,697 | INFO     | [data] copytool_in thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,728 | INFO     | [data] copytool_out thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-29 01:49:05] 2024-04-28 23:48:50,798 | INFO     | [job] control thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:50,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-29 01:49:05] 2024-04-28 23:48:50,900 | INFO     | [payload] execute_payloads thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:51,326 | INFO     | [payload] failed_post thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:51,796 | INFO     | [job] queue monitor thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:54,836 | INFO     | [data] queue_monitor thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:48:58,968 | INFO     | job.realtimelogging is not enabled
[2024-04-29 01:49:05] 2024-04-28 23:48:59,974 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-29 01:49:05] 2024-04-28 23:49:00,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126209130583872)>', '<ExcThread(monitor, started 126208486405888)>']
[2024-04-29 01:49:05] 2024-04-28 23:49:00,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-29 01:49:05] 2024-04-28 23:49:00,785 | INFO     | [monitor] control thread has ended
[2024-04-29 01:49:05] 2024-04-28 23:49:05,242 | INFO     | all workflow threads have been joined
[2024-04-29 01:49:05] 2024-04-28 23:49:05,242 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-29 01:49:05] 2024-04-28 23:49:05,242 | INFO     | traces error code: 0
[2024-04-29 01:49:05] 2024-04-28 23:49:05,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-29 01:49:05] 2024-04-28 23:49:05,286 [wrapper] ==== pilot stdout END ====
[2024-04-29 01:49:05] 2024-04-28 23:49:05,290 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-29 01:49:05] 2024-04-28 23:49:05,293 [wrapper] pilotpid: 130782
[2024-04-29 01:49:05] 2024-04-28 23:49:05,296 [wrapper] Pilot exit status: 0
[2024-04-29 01:49:05] 2024-04-28 23:49:05,314 [wrapper] pandaids: 6183498888
[2024-04-29 01:49:05] 2024-04-28 23:49:05,338 [wrapper] cleanup: SIGTERM to supervisor_pilot  181184 130783
[2024-04-29 01:49:05] 2024-04-28 23:49:05,343 [wrapper] Test setup, not cleaning
[2024-04-29 01:49:05] 2024-04-28 23:49:05,347 [wrapper] ==== wrapper stdout END ====
[2024-04-29 01:49:05] 2024-04-28 23:49:05,351 [wrapper] ==== wrapper stderr END ====
[2024-04-29 01:49:05] 2024-04-28 23:49:05,361 [wrapper] apfmon messages muted
[2024-04-29 01:49:05]  *** Error codes and diagnostics ***
[2024-04-29 01:49:05]     "exeErrorCode": 0,
[2024-04-29 01:49:05]     "exeErrorDiag": "",
[2024-04-29 01:49:05]     "pilotErrorCode": 0,
[2024-04-29 01:49:05]     "pilotErrorDiag": "",
[2024-04-29 01:49:05]  *** Listing of results directory ***
[2024-04-29 01:49:05] insgesamt 817604
[2024-04-29 01:49:05] -rw-r--r-- 1 yeti yeti    462745 Apr 22 12:44 pilot3.tar.gz
[2024-04-29 01:49:05] -rwx------ 1 yeti yeti     32211 Apr 22 13:09 runpilot2-wrapper.sh
[2024-04-29 01:49:05] -rw-r--r-- 1 yeti yeti      6720 Apr 22 13:09 queuedata.json
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti       100 Apr 28 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-29 01:49:05] -rwxr-xr-x 1 yeti yeti      7986 Apr 28 23:39 run_atlas
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti       105 Apr 28 23:39 job.xml
[2024-04-29 01:49:05] -rw-r--r-- 2 yeti yeti     17537 Apr 28 23:39 start_atlas.sh
[2024-04-29 01:49:05] drwxrwx--x 2 yeti yeti      4096 Apr 28 23:39 shared
[2024-04-29 01:49:05] -rw-r--r-- 2 yeti yeti    474794 Apr 28 23:39 input.tar.gz
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti      6537 Apr 28 23:39 init_data.xml
[2024-04-29 01:49:05] -rw-r--r-- 2 yeti yeti 569651378 Apr 28 23:39 EVNT.38222087._000009.pool.root.1
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti         0 Apr 28 23:39 boinc_lockfile
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti      2606 Apr 28 23:39 pandaJob.out
[2024-04-29 01:49:05] -rw------- 1 yeti yeti       462 Apr 28 23:39 setup.sh.local
[2024-04-29 01:49:05] -rw------- 1 yeti yeti   1000981 Apr 28 23:39 agis_schedconf.cvmfs.json
[2024-04-29 01:49:05] -rw------- 1 yeti yeti         0 Apr 28 23:39 agis_ddmendpoints.agis.ALL.json
[2024-04-29 01:49:05] -rw------- 1 yeti yeti   1315307 Apr 28 23:39 cric_ddmendpoints.json
[2024-04-29 01:49:05] drwx------ 4 yeti yeti      4096 Apr 28 23:39 pilot3
[2024-04-29 01:49:05] -rw------- 1 yeti yeti 261963240 Apr 29 01:48 HITS.38222094._000223.pool.root.1
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti       530 Apr 29 01:48 boinc_task_state.xml
[2024-04-29 01:49:05] -rw------- 1 yeti yeti      1021 Apr 29 01:48 memory_monitor_summary.json
[2024-04-29 01:49:05] -rw------- 1 yeti yeti    281753 Apr 29 01:48 log.38222094._000223.job.log.tgz.1
[2024-04-29 01:49:05] -rw------- 1 yeti yeti        95 Apr 29 01:48 pilot_heartbeat.json
[2024-04-29 01:49:05] -rw------- 1 yeti yeti      7651 Apr 29 01:48 heartbeat.json
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti      8192 Apr 29 01:49 boinc_mmap_file
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti        27 Apr 29 01:49 wrapper_checkpoint.txt
[2024-04-29 01:49:05] -rw------- 1 yeti yeti      4482 Apr 29 01:49 pilotlog.txt
[2024-04-29 01:49:05] -rw------- 1 yeti yeti    778881 Apr 29 01:49 log.38222094._000223.job.log.1
[2024-04-29 01:49:05] -rw------- 1 yeti yeti       357 Apr 29 01:49 output.list
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti       620 Apr 29 01:49 runtime_log
[2024-04-29 01:49:05] -rw------- 1 yeti yeti   1075200 Apr 29 01:49 result.tar.gz
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti     11602 Apr 29 01:49 runtime_log.err
[2024-04-29 01:49:05] -rw------- 1 yeti yeti       629 Apr 29 01:49 BqNODm6i6I5nsSi4apGgGQJmABFKDmABFKDmRLXKDmy7NKDmF01Cmn.diag
[2024-04-29 01:49:05] -rw-rw-r-- 1 yeti yeti     20752 Apr 29 01:49 stderr.txt
[2024-04-29 01:49:05] HITS file was successfully produced:
[2024-04-29 01:49:05] -rw------- 1 yeti yeti 261963240 Apr 29 01:48 shared/HITS.pool.root.1
[2024-04-29 01:49:05]  *** Contents of shared directory: ***
[2024-04-29 01:49:05] insgesamt 813672
[2024-04-29 01:49:05] -rw-r--r-- 2 yeti yeti     17537 Apr 28 23:39 start_atlas.sh
[2024-04-29 01:49:05] -rw-r--r-- 2 yeti yeti    474794 Apr 28 23:39 input.tar.gz
[2024-04-29 01:49:05] -rw-r--r-- 2 yeti yeti 569651378 Apr 28 23:39 ATLAS.root_0
[2024-04-29 01:49:05] -rw------- 1 yeti yeti 261963240 Apr 29 01:48 HITS.pool.root.1
[2024-04-29 01:49:05] -rw------- 1 yeti yeti   1075200 Apr 29 01:49 result.tar.gz
01:49:07 (126145): run_atlas exited; CPU time 29489.540674
01:49:07 (126145): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN