Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:53 (547560): wrapper (7.7.26015): starting
13:48:53 (547560): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 13:48:53] Arguments: --nthreads 4
[2024-04-26 13:48:53] Threads: 4
[2024-04-26 13:48:53] Checking for CVMFS
[2024-04-26 13:48:53] No cvmfs_config command found, will try listing directly
[2024-04-26 13:48:53] CVMFS is ok
[2024-04-26 13:48:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 13:48:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 13:48:53] Further information can be found at the LHC@home message board.
[2024-04-26 13:48:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 13:48:53] Checking for apptainer binary...
[2024-04-26 13:48:53] which: no apptainer in ((null))
[2024-04-26 13:48:53] apptainer is not installed, using version from CVMFS
[2024-04-26 13:48:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 13:48:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-04-26 13:48:54] apptainer works
[2024-04-26 13:48:54] Set ATHENA_PROC_NUMBER=4
[2024-04-26 13:48:54] Set ATHENA_CORE_NUMBER=4
[2024-04-26 13:48:54] Starting ATLAS job with PandaID=6182628359
[2024-04-26 13:48:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 16:49:15]  *** The last 200 lines of the pilot log: ***
[2024-04-26 16:49:15]  ddm_activity=['write_lan', 'write_wan']
[2024-04-26 16:49:15]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-26 16:49:15]  direct_access_lan=False
[2024-04-26 16:49:15]  direct_access_wan=False
[2024-04-26 16:49:15]  domain=
[2024-04-26 16:49:15]  filesize=290433
[2024-04-26 16:49:15]  filetype=log
[2024-04-26 16:49:15]  guid=292bba53-3e6c-465d-a7bb-da540d4a83d9
[2024-04-26 16:49:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 16:49:15]  is_tar=False
[2024-04-26 16:49:15]  lfn=log.38204263._001607.job.log.tgz.1
[2024-04-26 16:49:15]  mtime=0
[2024-04-26 16:49:15]  protocol_id=None
[2024-04-26 16:49:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 16:49:15]  replicas=None
[2024-04-26 16:49:15]  scope=mc23_13p6TeV
[2024-04-26 16:49:15]  status=None
[2024-04-26 16:49:15]  status_code=0
[2024-04-26 16:49:15]  storage_token=
[2024-04-26 16:49:15]  surl=/scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6182628359/log.38204263._001607.job.log.tgz.1
[2024-04-26 16:49:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/02/log.38204263._001607.job.log.tgz.1
[2024-04-26 16:49:15]  workdir=None
[2024-04-26 16:49:15] ]
[2024-04-26 16:49:15] 2024-04-26 14:48:50,585 | INFO     | transferring file log.38204263._001607.job.log.tgz.1 from /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6182628359/log.38204263._001607.job.log.tgz.1 to /scratch/b
[2024-04-26 16:49:15] 2024-04-26 14:48:50,585 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6182628359/log.38204263._001607.job.log.tgz.1 /scratch/boinc/var/slot44/slots/0/lo
[2024-04-26 16:49:15] 2024-04-26 14:48:50,603 | INFO     | adding to output.list: log.38204263._001607.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/02/log.38204263._001607.job.log.tg
[2024-04-26 16:49:15] 2024-04-26 14:48:50,604 | INFO     | summary of transferred files:
[2024-04-26 16:49:15] 2024-04-26 14:48:50,604 | INFO     |  -- lfn=log.38204263._001607.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 16:49:15] 2024-04-26 14:48:50,604 | INFO     | stage-out finished correctly
[2024-04-26 16:49:15] 2024-04-26 14:48:52,510 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 16:49:15] 2024-04-26 14:48:55,078 | INFO     | job 6182628359 has state=finished
[2024-04-26 16:49:15] 2024-04-26 14:48:55,079 | INFO     | preparing for final server update for job 6182628359 in state='finished'
[2024-04-26 16:49:15] 2024-04-26 14:48:55,087 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /scratch/boinc/var/slot44/slots/0/PanDA_Pilot
[2024-04-26 16:49:15] 2024-04-26 14:48:56,304 | INFO     | this job has now completed (state=finished)
[2024-04-26 16:49:15] 2024-04-26 14:48:56,305 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 16:49:15] 2024-04-26 14:48:56,308 | INFO     | job 6182628359 has finished - writing final server update
[2024-04-26 16:49:15] 2024-04-26 14:48:56,309 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1002738/.job.ad'
[2024-04-26 16:49:15] 2024-04-26 14:48:56,310 | INFO     | total number of processed events: 400 (read)
[2024-04-26 16:49:15] 2024-04-26 14:48:56,315 | INFO     | executing command: lscpu
[2024-04-26 16:49:15] 2024-04-26 14:48:56,454 | WARNING  | process 558984 is no longer using CPU - aborting
[2024-04-26 16:49:15] 2024-04-26 14:48:56,454 | INFO     | will not send any job update
[2024-04-26 16:49:15] 2024-04-26 14:48:56,500 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 16:49:15] 2024-04-26 14:48:56,501 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 16:49:15] 2024-04-26 14:48:56,537 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 16:49:15] 2024-04-26 14:48:58,956 | INFO     | monitor loop #828: job 0:6182628359 is in state 'finished'
[2024-04-26 16:49:15] 2024-04-26 14:48:58,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,515 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 16:49:15] 2024-04-26 14:48:59,515 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6182628359/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,517 | INFO     | extracted standard info from prmon json
[2024-04-26 16:49:15] 2024-04-26 14:48:59,517 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 16:49:15] 2024-04-26 14:48:59,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 16:49:15] 2024-04-26 14:48:59,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 16:49:15] 2024-04-26 14:48:59,519 | INFO     | fitting pss+swap vs Time
[2024-04-26 16:49:15] 2024-04-26 14:48:59,521 | INFO     | current chi2=3.902811799170505 (change=17.140177478205494 %)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,521 | INFO     | right removable region: 171
[2024-04-26 16:49:15] 2024-04-26 14:48:59,522 | INFO     | current chi2=2.32724001342522 (change=50.590829278773576 %)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,522 | INFO     | current chi2=0.9137726585745573 (change=60.7357791502703 %)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,523 | INFO     | current chi2=0.8537863358982221 (change=6.564687848059609 %)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,523 | INFO     | left removable region: 30
[2024-04-26 16:49:15] 2024-04-26 14:48:59,523 | INFO     | current memory leak: 2.72 B/s (using 141 data points, chi2=0.00)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | ..............................
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | . Timing measurements:
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | . get job = 0 s
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | . initial setup = 1 s
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | . payload setup = 5 s
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | . stage-in = 0 s
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | . payload execution = 10759 s
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | . stage-out = 0 s
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | . log creation = 0 s
[2024-04-26 16:49:15] 2024-04-26 14:48:59,524 | INFO     | ..............................
[2024-04-26 16:49:15] 2024-04-26 14:48:59,852 | INFO     | 
[2024-04-26 16:49:15] 2024-04-26 14:48:59,852 | INFO     | job summary report
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | --------------------------------------------------
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | PanDA job id: 6182628359
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | task id: 38204263
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | errors: (none)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | pilot state: finished 
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | transexitcode: 0
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | exeerrorcode: 0
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | exeerrordiag: 
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | exitcode: 0
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | exitmsg: OK
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | cpuconsumptiontime: 40208 s
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | nevents: 400
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | neventsw: 0
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | pid: 558984
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | pgrp: 558984
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | corecount: 4
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | event service: False
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | sizes: {0: 2374808, 1: 2375743, 5: 2375949, 11: 2376005, 10768: 2405007, 10770: 2413989, 10771: 2414173, 10778: 2414343}
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | --------------------------------------------------
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | 
[2024-04-26 16:49:15] 2024-04-26 14:48:59,853 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | job 6182628359 has completed (purged errors)
[2024-04-26 16:49:15] 2024-04-26 14:48:59,871 | INFO     | overall cleanup function is called
[2024-04-26 16:49:15] 2024-04-26 14:49:00,874 | INFO     | --- collectZombieJob: --- 10, [558984]
[2024-04-26 16:49:15] 2024-04-26 14:49:00,875 | INFO     | zombie collector waiting for pid 558984
[2024-04-26 16:49:15] 2024-04-26 14:49:00,875 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 16:49:15] 2024-04-26 14:49:01,880 | INFO     | collected zombie processes
[2024-04-26 16:49:15] 2024-04-26 14:49:01,880 | INFO     | will now attempt to kill all subprocesses of pid=558984
[2024-04-26 16:49:15] 2024-04-26 14:49:02,039 | INFO     | process IDs to be killed: [558984] (in reverse order)
[2024-04-26 16:49:15] 2024-04-26 14:49:02,134 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 16:49:15] 2024-04-26 14:49:02,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 16:49:15] 2024-04-26 14:49:02,141 | INFO     | did not find any defunct processes belonging to 558984
[2024-04-26 16:49:15] 2024-04-26 14:49:02,146 | INFO     | did not find any defunct processes belonging to 558984
[2024-04-26 16:49:15] 2024-04-26 14:49:02,146 | INFO     | ready for new job
[2024-04-26 16:49:15] 2024-04-26 14:49:02,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 16:49:15] 2024-04-26 14:49:02,148 | INFO     | *************************************
[2024-04-26 16:49:15] 2024-04-26 14:49:02,148 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 16:49:15] 2024-04-26 14:49:02,148 | INFO     | *************************************
[2024-04-26 16:49:15] 2024-04-26 14:49:02,148 | INFO     | 
[2024-04-26 16:49:15] 2024-04-26 14:49:02,150 | INFO     | architecture information:
[2024-04-26 16:49:15] 2024-04-26 14:49:02,151 | INFO     | executing command: cat /etc/os-release
[2024-04-26 16:49:15] 2024-04-26 14:49:02,163 | INFO     | cat /etc/os-release:
[2024-04-26 16:49:15] NAME="CentOS Linux"
[2024-04-26 16:49:15] VERSION="7 (Core)"
[2024-04-26 16:49:15] ID="centos"
[2024-04-26 16:49:15] ID_LIKE="rhel fedora"
[2024-04-26 16:49:15] VERSION_ID="7"
[2024-04-26 16:49:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 16:49:15] ANSI_COLOR="0;31"
[2024-04-26 16:49:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 16:49:15] HOME_URL="https://www.centos.org/"
[2024-04-26 16:49:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 16:49:15] 
[2024-04-26 16:49:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 16:49:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 16:49:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 16:49:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 16:49:15] 
[2024-04-26 16:49:15] 2024-04-26 14:49:02,164 | INFO     | *************************************
[2024-04-26 16:49:15] 2024-04-26 14:49:02,667 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2024-04-26 16:49:15] 2024-04-26 14:49:02,685 | INFO     | sufficient remaining disk space (618798252032 B)
[2024-04-26 16:49:15] 2024-04-26 14:49:02,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 16:49:15] 2024-04-26 14:49:02,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 16:49:15] 2024-04-26 14:49:02,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 16:49:15] 2024-04-26 14:49:02,686 | INFO     | aborting loop
[2024-04-26 16:49:15] 2024-04-26 14:49:02,957 | INFO     | all job control threads have been joined
[2024-04-26 16:49:15] 2024-04-26 14:49:03,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 16:49:15] 2024-04-26 14:49:03,145 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 16:49:15] 2024-04-26 14:49:03,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 16:49:15] 2024-04-26 14:49:03,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 16:49:15] 2024-04-26 14:49:03,591 | INFO     | all data control threads have been joined
[2024-04-26 16:49:15] 2024-04-26 14:49:03,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 16:49:15] 2024-04-26 14:49:03,690 | INFO     | [job] retrieve thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:03,691 | INFO     | [job] job monitor thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:03,702 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:03,869 | INFO     | all payload control threads have been joined
[2024-04-26 16:49:15] 2024-04-26 14:49:03,962 | INFO     | [job] control thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:04,087 | INFO     | [data] copytool_in thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:04,188 | INFO     | [payload] failed_post thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:04,340 | INFO     | [payload] validate_post thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:04,552 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:04,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 16:49:15] 2024-04-26 14:49:04,596 | INFO     | [data] control thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:04,874 | INFO     | [payload] control thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:04,883 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:05,141 | INFO     | [job] validate thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:05,181 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:05,591 | INFO     | [job] queue monitor thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:05,674 | INFO     | [data] copytool_out thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:07,085 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 16:49:15] 2024-04-26 14:49:09,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47920744842304)>', '<ExcThread(monitor, started 47920918177536)>']
[2024-04-26 16:49:15] 2024-04-26 14:49:09,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 16:49:15] 2024-04-26 14:49:09,171 | INFO     | [monitor] control thread has ended
[2024-04-26 16:49:15] 2024-04-26 14:49:14,119 | INFO     | all workflow threads have been joined
[2024-04-26 16:49:15] 2024-04-26 14:49:14,119 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 16:49:15] 2024-04-26 14:49:14,120 | INFO     | traces error code: 0
[2024-04-26 16:49:15] 2024-04-26 14:49:14,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 16:49:15] 2024-04-26 14:49:14,189 [wrapper] ==== pilot stdout END ====
[2024-04-26 16:49:15] 2024-04-26 14:49:14,191 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 16:49:15] 2024-04-26 14:49:14,194 [wrapper] pilotpid: 551954
[2024-04-26 16:49:15] 2024-04-26 14:49:14,196 [wrapper] Pilot exit status: 0
[2024-04-26 16:49:15] 2024-04-26 14:49:14,204 [wrapper] pandaids: 6182628359
[2024-04-26 16:49:15] 2024-04-26 14:49:14,259 [wrapper] cleanup: SIGTERM to supervisor_pilot 1121443 551955
[2024-04-26 16:49:15] 2024-04-26 14:49:14,261 [wrapper] Test setup, not cleaning
[2024-04-26 16:49:15] 2024-04-26 14:49:14,263 [wrapper] ==== wrapper stdout END ====
[2024-04-26 16:49:15] 2024-04-26 14:49:14,265 [wrapper] ==== wrapper stderr END ====
[2024-04-26 16:49:15] 2024-04-26 14:49:14,269 [wrapper] apfmon messages muted
[2024-04-26 16:49:15]  *** Error codes and diagnostics ***
[2024-04-26 16:49:15]     "exeErrorCode": 0,
[2024-04-26 16:49:15]     "exeErrorDiag": "",
[2024-04-26 16:49:15]     "pilotErrorCode": 0,
[2024-04-26 16:49:15]     "pilotErrorDiag": "",
[2024-04-26 16:49:15]  *** Listing of results directory ***
[2024-04-26 16:49:15] total 706100
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc    462745 Apr 21 17:07 pilot3.tar.gz
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc      6720 Apr 21 17:09 queuedata.json
[2024-04-26 16:49:15] -rwx------ 1 boinc boinc     32211 Apr 21 17:10 runpilot2-wrapper.sh
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc       100 Apr 26 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 16:49:15] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 13:48 run_atlas
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc       105 Apr 26 13:48 job.xml
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc      6663 Apr 26 13:48 init_data.xml
[2024-04-26 16:49:15] -rw-r--r-- 2 boinc boinc 521460443 Apr 26 13:48 EVNT.38204261._000065.pool.root.1
[2024-04-26 16:49:15] -rw-r--r-- 2 boinc boinc     17537 Apr 26 13:48 start_atlas.sh
[2024-04-26 16:49:15] drwxrwx--x 2 boinc boinc      4096 Apr 26 13:48 shared
[2024-04-26 16:49:15] -rw-r--r-- 2 boinc boinc    474816 Apr 26 13:48 input.tar.gz
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc         0 Apr 26 13:48 boinc_lockfile
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc      2649 Apr 26 13:48 pandaJob.out
[2024-04-26 16:49:15] -rw------- 1 boinc boinc       424 Apr 26 13:48 setup.sh.local
[2024-04-26 16:49:15] -rw------- 1 boinc boinc    997814 Apr 26 13:49 agis_schedconf.cvmfs.json
[2024-04-26 16:49:15] -rw------- 1 boinc boinc         0 Apr 26 13:49 agis_ddmendpoints.agis.ALL.json
[2024-04-26 16:49:15] -rw------- 1 boinc boinc   1315307 Apr 26 13:49 cric_ddmendpoints.json
[2024-04-26 16:49:15] drwx------ 4 boinc boinc      4096 Apr 26 13:49 pilot3
[2024-04-26 16:49:15] -rw------- 1 boinc boinc 195471942 Apr 26 16:48 HITS.38204263._001607.pool.root.1
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc       532 Apr 26 16:48 boinc_task_state.xml
[2024-04-26 16:49:15] -rw------- 1 boinc boinc        95 Apr 26 16:48 pilot_heartbeat.json
[2024-04-26 16:49:15] -rw------- 1 boinc boinc      1045 Apr 26 16:48 memory_monitor_summary.json
[2024-04-26 16:49:15] -rw------- 1 boinc boinc    290433 Apr 26 16:48 log.38204263._001607.job.log.tgz.1
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc      8192 Apr 26 16:48 boinc_mmap_file
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc        28 Apr 26 16:48 wrapper_checkpoint.txt
[2024-04-26 16:49:15] -rw------- 1 boinc boinc      7739 Apr 26 16:48 heartbeat.json
[2024-04-26 16:49:15] -rw------- 1 boinc boinc      4221 Apr 26 16:49 pilotlog.txt
[2024-04-26 16:49:15] -rw------- 1 boinc boinc   1025038 Apr 26 16:49 log.38204263._001607.job.log.1
[2024-04-26 16:49:15] -rw------- 1 boinc boinc       357 Apr 26 16:49 output.list
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc       620 Apr 26 16:49 runtime_log
[2024-04-26 16:49:15] -rw------- 1 boinc boinc   1331200 Apr 26 16:49 result.tar.gz
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc     11410 Apr 26 16:49 runtime_log.err
[2024-04-26 16:49:15] -rw------- 1 boinc boinc       656 Apr 26 16:49 nxHLDmH1nI5np2BDcpmwOghnABFKDmABFKDmJjxZDm26GKDm3Nm1sn.diag
[2024-04-26 16:49:15] -rw-r--r-- 1 boinc boinc     20964 Apr 26 16:49 stderr.txt
[2024-04-26 16:49:15] HITS file was successfully produced:
[2024-04-26 16:49:15] -rw------- 1 boinc boinc 195471942 Apr 26 16:48 shared/HITS.pool.root.1
[2024-04-26 16:49:15]  *** Contents of shared directory: ***
[2024-04-26 16:49:15] total 701924
[2024-04-26 16:49:15] -rw-r--r-- 2 boinc boinc 521460443 Apr 26 13:48 ATLAS.root_0
[2024-04-26 16:49:15] -rw-r--r-- 2 boinc boinc     17537 Apr 26 13:48 start_atlas.sh
[2024-04-26 16:49:15] -rw-r--r-- 2 boinc boinc    474816 Apr 26 13:48 input.tar.gz
[2024-04-26 16:49:15] -rw------- 1 boinc boinc 195471942 Apr 26 16:48 HITS.pool.root.1
[2024-04-26 16:49:15] -rw------- 1 boinc boinc   1331200 Apr 26 16:49 result.tar.gz
16:49:16 (547560): run_atlas exited; CPU time 39981.794082
16:49:16 (547560): called boinc_finish(0)

</stderr_txt>
]]>

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