Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:52:02 (1873022): wrapper (7.7.26015): starting
16:52:02 (1873022): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 16:52:02] Arguments: --nthreads 4
[2024-04-26 16:52:02] Threads: 4
[2024-04-26 16:52:02] Checking for CVMFS
[2024-04-26 16:52:02] No cvmfs_config command found, will try listing directly
[2024-04-26 16:52:02] CVMFS is ok
[2024-04-26 16:52:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 16:52:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 16:52:02] Further information can be found at the LHC@home message board.
[2024-04-26 16:52:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 16:52:02] Checking for apptainer binary...
[2024-04-26 16:52:02] which: no apptainer in ((null))
[2024-04-26 16:52:02] apptainer is not installed, using version from CVMFS
[2024-04-26 16:52:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 16:52:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-04-26 16:52:03] apptainer works
[2024-04-26 16:52:03] Set ATHENA_PROC_NUMBER=4
[2024-04-26 16:52:03] Set ATHENA_CORE_NUMBER=4
[2024-04-26 16:52:03] Starting ATLAS job with PandaID=6182567433
[2024-04-26 16:52:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 19:40:18]  *** The last 200 lines of the pilot log: ***
[2024-04-26 19:40:18]  filesize=292924
[2024-04-26 19:40:18]  filetype=log
[2024-04-26 19:40:18]  guid=ab480e7d-b07a-4b69-9bbb-58093175294c
[2024-04-26 19:40:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 19:40:18]  is_tar=False
[2024-04-26 19:40:18]  lfn=log.38207211._000087.job.log.tgz.1
[2024-04-26 19:40:18]  mtime=0
[2024-04-26 19:40:18]  protocol_id=None
[2024-04-26 19:40:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 19:40:18]  replicas=None
[2024-04-26 19:40:18]  scope=mc23_13p6TeV
[2024-04-26 19:40:18]  status=None
[2024-04-26 19:40:18]  status_code=0
[2024-04-26 19:40:18]  storage_token=
[2024-04-26 19:40:18]  surl=/scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6182567433/log.38207211._000087.job.log.tgz.1
[2024-04-26 19:40:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/3f/log.38207211._000087.job.log.tgz.1
[2024-04-26 19:40:18]  workdir=None
[2024-04-26 19:40:18] ]
[2024-04-26 19:40:18] 2024-04-26 17:39:49,139 | INFO     | transferring file log.38207211._000087.job.log.tgz.1 from /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6182567433/log.38207211._000087.job.log.tgz.1 to /scratch/b
[2024-04-26 19:40:18] 2024-04-26 17:39:49,139 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6182567433/log.38207211._000087.job.log.tgz.1 /scratch/boinc/var/slot44/slots/0/lo
[2024-04-26 19:40:18] 2024-04-26 17:39:49,155 | INFO     | adding to output.list: log.38207211._000087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/3f/log.38207211._000087.job.log.tg
[2024-04-26 19:40:18] 2024-04-26 17:39:49,156 | INFO     | summary of transferred files:
[2024-04-26 19:40:18] 2024-04-26 17:39:49,156 | INFO     |  -- lfn=log.38207211._000087.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 19:40:18] 2024-04-26 17:39:49,156 | INFO     | stage-out finished correctly
[2024-04-26 19:40:18] 2024-04-26 17:39:49,635 | INFO     | monitor loop #771: job 0:6182567433 is in state 'finished'
[2024-04-26 19:40:18] 2024-04-26 17:39:49,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 19:40:18] 2024-04-26 17:39:49,988 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 19:40:18] 2024-04-26 17:39:52,137 | INFO     | monitor loop #772: job 0:6182567433 is in state 'finished'
[2024-04-26 19:40:18] 2024-04-26 17:39:52,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 19:40:18] 2024-04-26 17:39:52,620 | INFO     | job 6182567433 has state=finished
[2024-04-26 19:40:18] 2024-04-26 17:39:52,621 | INFO     | preparing for final server update for job 6182567433 in state='finished'
[2024-04-26 19:40:18] 2024-04-26 17:39:52,622 | INFO     | this job has now completed (state=finished)
[2024-04-26 19:40:18] 2024-04-26 17:39:52,622 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 19:40:18] 2024-04-26 17:39:52,622 | INFO     | job 6182567433 has finished - writing final server update
[2024-04-26 19:40:18] 2024-04-26 17:39:52,622 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2152686/.job.ad'
[2024-04-26 19:40:18] 2024-04-26 17:39:52,622 | INFO     | total number of processed events: 400 (read)
[2024-04-26 19:40:18] 2024-04-26 17:39:52,628 | INFO     | executing command: lscpu
[2024-04-26 19:40:18] 2024-04-26 17:39:52,691 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 19:40:18] 2024-04-26 17:39:52,692 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 19:40:18] 2024-04-26 17:39:52,733 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 19:40:18] 2024-04-26 17:39:54,641 | INFO     | monitor loop #773: job 0:6182567433 is in state 'finished'
[2024-04-26 19:40:18] 2024-04-26 17:39:54,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,384 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 19:40:18] 2024-04-26 17:39:56,385 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6182567433/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,386 | INFO     | extracted standard info from prmon json
[2024-04-26 19:40:18] 2024-04-26 17:39:56,386 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 19:40:18] 2024-04-26 17:39:56,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 19:40:18] 2024-04-26 17:39:56,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 19:40:18] 2024-04-26 17:39:56,390 | INFO     | fitting pss+swap vs Time
[2024-04-26 19:40:18] 2024-04-26 17:39:56,392 | INFO     | current chi2=4.056095442985909 (change=17.184915391949794 %)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,392 | INFO     | right removable region: 159
[2024-04-26 19:40:18] 2024-04-26 17:39:56,393 | INFO     | current chi2=2.407902953004581 (change=50.83678636658229 %)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,394 | INFO     | current chi2=0.9410357673899739 (change=60.91886650931054 %)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,395 | INFO     | current chi2=0.8880121207551153 (change=5.634604812304132 %)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,395 | INFO     | left removable region: 30
[2024-04-26 19:40:18] 2024-04-26 17:39:56,396 | INFO     | current memory leak: 2.17 B/s (using 129 data points, chi2=0.00)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | ..............................
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | . Timing measurements:
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | . get job = 0 s
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | . initial setup = 1 s
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | . payload setup = 5 s
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | . stage-in = 0 s
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | . payload execution = 10031 s
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | . stage-out = 0 s
[2024-04-26 19:40:18] 2024-04-26 17:39:56,397 | INFO     | . log creation = 0 s
[2024-04-26 19:40:18] 2024-04-26 17:39:56,398 | INFO     | ..............................
[2024-04-26 19:40:18] 2024-04-26 17:39:56,484 | INFO     | 
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | job summary report
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | --------------------------------------------------
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | PanDA job id: 6182567433
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | task id: 38207211
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | errors: (none)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | pilot state: finished 
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | transexitcode: 0
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | exeerrorcode: 0
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | exeerrordiag: 
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | exitcode: 0
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | exitmsg: OK
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | cpuconsumptiontime: 37359 s
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | nevents: 400
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | neventsw: 0
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | pid: 1884449
[2024-04-26 19:40:18] 2024-04-26 17:39:56,485 | INFO     | pgrp: 1884449
[2024-04-26 19:40:18] 2024-04-26 17:39:56,486 | INFO     | corecount: 4
[2024-04-26 19:40:18] 2024-04-26 17:39:56,486 | INFO     | event service: False
[2024-04-26 19:40:18] 2024-04-26 17:39:56,486 | INFO     | sizes: {0: 2375677, 4: 2375883, 11: 2375911, 10039: 2404468, 10040: 2413450, 10041: 2413506, 10047: 2413804}
[2024-04-26 19:40:18] 2024-04-26 17:39:56,486 | INFO     | --------------------------------------------------
[2024-04-26 19:40:18] 2024-04-26 17:39:56,486 | INFO     | 
[2024-04-26 19:40:18] 2024-04-26 17:39:56,486 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2024-04-26 19:40:18] 2024-04-26 17:39:56,504 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,504 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,504 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,504 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | job 6182567433 has completed (purged errors)
[2024-04-26 19:40:18] 2024-04-26 17:39:56,505 | INFO     | overall cleanup function is called
[2024-04-26 19:40:18] 2024-04-26 17:39:57,512 | INFO     | --- collectZombieJob: --- 10, [1884449]
[2024-04-26 19:40:18] 2024-04-26 17:39:57,512 | INFO     | zombie collector waiting for pid 1884449
[2024-04-26 19:40:18] 2024-04-26 17:39:57,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 19:40:18] 2024-04-26 17:39:58,517 | INFO     | collected zombie processes
[2024-04-26 19:40:18] 2024-04-26 17:39:58,517 | INFO     | will now attempt to kill all subprocesses of pid=1884449
[2024-04-26 19:40:18] 2024-04-26 17:39:58,682 | INFO     | process IDs to be killed: [1884449] (in reverse order)
[2024-04-26 19:40:18] 2024-04-26 17:39:58,778 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 19:40:18] 2024-04-26 17:39:58,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 19:40:18] 2024-04-26 17:39:58,785 | INFO     | did not find any defunct processes belonging to 1884449
[2024-04-26 19:40:18] 2024-04-26 17:39:58,791 | INFO     | did not find any defunct processes belonging to 1884449
[2024-04-26 19:40:18] 2024-04-26 17:39:58,792 | INFO     | ready for new job
[2024-04-26 19:40:18] 2024-04-26 17:39:58,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 19:40:18] 2024-04-26 17:39:58,793 | INFO     | *************************************
[2024-04-26 19:40:18] 2024-04-26 17:39:58,793 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 19:40:18] 2024-04-26 17:39:58,793 | INFO     | *************************************
[2024-04-26 19:40:18] 2024-04-26 17:39:58,793 | INFO     | 
[2024-04-26 19:40:18] 2024-04-26 17:39:58,796 | INFO     | architecture information:
[2024-04-26 19:40:18] 2024-04-26 17:39:58,796 | INFO     | executing command: cat /etc/os-release
[2024-04-26 19:40:18] 2024-04-26 17:39:58,810 | INFO     | cat /etc/os-release:
[2024-04-26 19:40:18] NAME="CentOS Linux"
[2024-04-26 19:40:18] VERSION="7 (Core)"
[2024-04-26 19:40:18] ID="centos"
[2024-04-26 19:40:18] ID_LIKE="rhel fedora"
[2024-04-26 19:40:18] VERSION_ID="7"
[2024-04-26 19:40:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 19:40:18] ANSI_COLOR="0;31"
[2024-04-26 19:40:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 19:40:18] HOME_URL="https://www.centos.org/"
[2024-04-26 19:40:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 19:40:18] 
[2024-04-26 19:40:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 19:40:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 19:40:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 19:40:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 19:40:18] 
[2024-04-26 19:40:18] 2024-04-26 17:39:58,810 | INFO     | *************************************
[2024-04-26 19:40:18] 2024-04-26 17:39:59,313 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2024-04-26 19:40:18] 2024-04-26 17:39:59,330 | INFO     | sufficient remaining disk space (612039131136 B)
[2024-04-26 19:40:18] 2024-04-26 17:39:59,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 19:40:18] 2024-04-26 17:39:59,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 19:40:18] 2024-04-26 17:39:59,331 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 19:40:18] 2024-04-26 17:39:59,331 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 19:40:18] 2024-04-26 17:39:59,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 19:40:18] 2024-04-26 17:39:59,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 19:40:18] 2024-04-26 17:39:59,593 | INFO     | all payload control threads have been joined
[2024-04-26 19:40:18] 2024-04-26 17:39:59,651 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-26 19:40:18] 2024-04-26 17:39:59,651 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-26 19:40:18] 2024-04-26 17:39:59,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 19:40:18] 2024-04-26 17:39:59,652 | INFO     | will abort loop
[2024-04-26 19:40:18] 2024-04-26 17:39:59,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 19:40:18] 2024-04-26 17:40:00,041 | INFO     | all data control threads have been joined
[2024-04-26 19:40:18] 2024-04-26 17:40:00,336 | INFO     | [job] retrieve thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:00,507 | INFO     | [data] copytool_in thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:00,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 19:40:18] 2024-04-26 17:40:00,592 | INFO     | [payload] validate_post thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:00,598 | INFO     | [payload] control thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:00,657 | INFO     | [job] job monitor thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:00,693 | INFO     | all job control threads have been joined
[2024-04-26 19:40:18] 2024-04-26 17:40:00,791 | INFO     | [payload] failed_post thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:01,046 | INFO     | [data] control thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:01,291 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:01,297 | INFO     | [job] validate thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:01,342 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:01,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 19:40:18] 2024-04-26 17:40:01,619 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:01,698 | INFO     | [job] control thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:01,732 | INFO     | [data] copytool_out thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:02,499 | INFO     | [job] queue monitor thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:04,578 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:10,083 | INFO     | job.realtimelogging is not enabled
[2024-04-26 19:40:18] 2024-04-26 17:40:11,088 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 19:40:18] 2024-04-26 17:40:12,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47253697934400)>', '<ExcThread(monitor, started 47253869168384)>']
[2024-04-26 19:40:18] 2024-04-26 17:40:12,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 19:40:18] 2024-04-26 17:40:12,384 | INFO     | [monitor] control thread has ended
[2024-04-26 19:40:18] 2024-04-26 17:40:17,196 | INFO     | all workflow threads have been joined
[2024-04-26 19:40:18] 2024-04-26 17:40:17,196 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 19:40:18] 2024-04-26 17:40:17,196 | INFO     | traces error code: 0
[2024-04-26 19:40:18] 2024-04-26 17:40:17,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 19:40:18] 2024-04-26 17:40:17,276 [wrapper] ==== pilot stdout END ====
[2024-04-26 19:40:18] 2024-04-26 17:40:17,279 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 19:40:18] 2024-04-26 17:40:17,281 [wrapper] pilotpid: 1877382
[2024-04-26 19:40:18] 2024-04-26 17:40:17,283 [wrapper] Pilot exit status: 0
[2024-04-26 19:40:18] 2024-04-26 17:40:17,290 [wrapper] pandaids: 6182567433
[2024-04-26 19:40:18] 2024-04-26 17:40:17,351 [wrapper] cleanup: SIGTERM to supervisor_pilot 2314064 1877383
[2024-04-26 19:40:18] 2024-04-26 17:40:17,354 [wrapper] Test setup, not cleaning
[2024-04-26 19:40:18] 2024-04-26 17:40:17,357 [wrapper] ==== wrapper stdout END ====
[2024-04-26 19:40:18] 2024-04-26 17:40:17,359 [wrapper] ==== wrapper stderr END ====
[2024-04-26 19:40:18] 2024-04-26 17:40:17,363 [wrapper] apfmon messages muted
[2024-04-26 19:40:18]  *** Error codes and diagnostics ***
[2024-04-26 19:40:18]     "exeErrorCode": 0,
[2024-04-26 19:40:18]     "exeErrorDiag": "",
[2024-04-26 19:40:18]     "pilotErrorCode": 0,
[2024-04-26 19:40:18]     "pilotErrorDiag": "",
[2024-04-26 19:40:18]  *** Listing of results directory ***
[2024-04-26 19:40:18] total 693032
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc    462745 Apr 21 15:58 pilot3.tar.gz
[2024-04-26 19:40:18] -rwx------ 1 boinc boinc     32211 Apr 21 16:18 runpilot2-wrapper.sh
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc      6720 Apr 21 16:18 queuedata.json
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc       100 Apr 26 16:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 19:40:18] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 16:51 run_atlas
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc       105 Apr 26 16:51 job.xml
[2024-04-26 19:40:18] -rw-r--r-- 2 boinc boinc 515385540 Apr 26 16:52 EVNT.38207209._000009.pool.root.1
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc      6663 Apr 26 16:52 init_data.xml
[2024-04-26 19:40:18] -rw-r--r-- 2 boinc boinc     17537 Apr 26 16:52 start_atlas.sh
[2024-04-26 19:40:18] drwxrwx--x 2 boinc boinc      4096 Apr 26 16:52 shared
[2024-04-26 19:40:18] -rw-r--r-- 2 boinc boinc    474803 Apr 26 16:52 input.tar.gz
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc         0 Apr 26 16:52 boinc_lockfile
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc      2618 Apr 26 16:52 pandaJob.out
[2024-04-26 19:40:18] -rw------- 1 boinc boinc       424 Apr 26 16:52 setup.sh.local
[2024-04-26 19:40:18] -rw------- 1 boinc boinc    997829 Apr 26 16:52 agis_schedconf.cvmfs.json
[2024-04-26 19:40:18] -rw------- 1 boinc boinc         0 Apr 26 16:52 agis_ddmendpoints.agis.ALL.json
[2024-04-26 19:40:18] -rw------- 1 boinc boinc   1315307 Apr 26 16:52 cric_ddmendpoints.json
[2024-04-26 19:40:18] drwx------ 4 boinc boinc      4096 Apr 26 16:52 pilot3
[2024-04-26 19:40:18] -rw------- 1 boinc boinc 188288741 Apr 26 19:39 HITS.38207211._000087.pool.root.1
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc       531 Apr 26 19:39 boinc_task_state.xml
[2024-04-26 19:40:18] -rw------- 1 boinc boinc        95 Apr 26 19:39 pilot_heartbeat.json
[2024-04-26 19:40:18] -rw------- 1 boinc boinc      1048 Apr 26 19:39 memory_monitor_summary.json
[2024-04-26 19:40:18] -rw------- 1 boinc boinc    292924 Apr 26 19:39 log.38207211._000087.job.log.tgz.1
[2024-04-26 19:40:18] -rw------- 1 boinc boinc      7728 Apr 26 19:39 heartbeat.json
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc        28 Apr 26 19:40 wrapper_checkpoint.txt
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc      8192 Apr 26 19:40 boinc_mmap_file
[2024-04-26 19:40:18] -rw------- 1 boinc boinc      4602 Apr 26 19:40 pilotlog.txt
[2024-04-26 19:40:18] -rw------- 1 boinc boinc    961241 Apr 26 19:40 log.38207211._000087.job.log.1
[2024-04-26 19:40:18] -rw------- 1 boinc boinc       357 Apr 26 19:40 output.list
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc       620 Apr 26 19:40 runtime_log
[2024-04-26 19:40:18] -rw------- 1 boinc boinc   1269760 Apr 26 19:40 result.tar.gz
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc     11410 Apr 26 19:40 runtime_log.err
[2024-04-26 19:40:18] -rw------- 1 boinc boinc       657 Apr 26 19:40 PqQLDmJCnI5n9Rq4apoT9bVoABFKDmABFKDmtztZDm8aKKDmsF7wSo.diag
[2024-04-26 19:40:18] -rw-r--r-- 1 boinc boinc     21289 Apr 26 19:40 stderr.txt
[2024-04-26 19:40:18] HITS file was successfully produced:
[2024-04-26 19:40:18] -rw------- 1 boinc boinc 188288741 Apr 26 19:39 shared/HITS.pool.root.1
[2024-04-26 19:40:18]  *** Contents of shared directory: ***
[2024-04-26 19:40:18] total 688916
[2024-04-26 19:40:18] -rw-r--r-- 2 boinc boinc 515385540 Apr 26 16:52 ATLAS.root_0
[2024-04-26 19:40:18] -rw-r--r-- 2 boinc boinc     17537 Apr 26 16:52 start_atlas.sh
[2024-04-26 19:40:18] -rw-r--r-- 2 boinc boinc    474803 Apr 26 16:52 input.tar.gz
[2024-04-26 19:40:18] -rw------- 1 boinc boinc 188288741 Apr 26 19:39 HITS.pool.root.1
[2024-04-26 19:40:18] -rw------- 1 boinc boinc   1269760 Apr 26 19:40 result.tar.gz
19:40:19 (1873022): run_atlas exited; CPU time 37142.839984
19:40:19 (1873022): called boinc_finish(0)

</stderr_txt>
]]>

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