Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:10:18 (1731583): wrapper (7.7.26015): starting
16:10:18 (1731583): wrapper: running run_atlas (--nthreads 4)
[2024-04-28 16:10:18] Arguments: --nthreads 4
[2024-04-28 16:10:18] Threads: 4
[2024-04-28 16:10:18] Checking for CVMFS
[2024-04-28 16:10:18] No cvmfs_config command found, will try listing directly
[2024-04-28 16:10:18] CVMFS is ok
[2024-04-28 16:10:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-28 16:10:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-28 16:10:18] Further information can be found at the LHC@home message board.
[2024-04-28 16:10:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-28 16:10:18] Checking for apptainer binary...
[2024-04-28 16:10:18] which: no apptainer in ((null))
[2024-04-28 16:10:18] apptainer is not installed, using version from CVMFS
[2024-04-28 16:10:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-28 16:10:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-04-28 16:10:19] apptainer works
[2024-04-28 16:10:19] Set ATHENA_PROC_NUMBER=4
[2024-04-28 16:10:19] Set ATHENA_CORE_NUMBER=4
[2024-04-28 16:10:19] Starting ATLAS job with PandaID=6182490735
[2024-04-28 16:10:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-28 19:29:21]  *** The last 200 lines of the pilot log: ***
[2024-04-28 19:29:21]  direct_access_wan=False
[2024-04-28 19:29:21]  domain=
[2024-04-28 19:29:21]  filesize=300611
[2024-04-28 19:29:21]  filetype=log
[2024-04-28 19:29:21]  guid=84a13318-3274-4267-afb6-1d68d2c7129b
[2024-04-28 19:29:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-28 19:29:21]  is_tar=False
[2024-04-28 19:29:21]  lfn=log.38204279._021299.job.log.tgz.1
[2024-04-28 19:29:21]  mtime=0
[2024-04-28 19:29:21]  protocol_id=None
[2024-04-28 19:29:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-28 19:29:21]  replicas=None
[2024-04-28 19:29:21]  scope=mc23_13p6TeV
[2024-04-28 19:29:21]  status=None
[2024-04-28 19:29:21]  status_code=0
[2024-04-28 19:29:21]  storage_token=
[2024-04-28 19:29:21]  surl=/scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6182490735/log.38204279._021299.job.log.tgz.1
[2024-04-28 19:29:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/c7/log.38204279._021299.job.log.tgz.1
[2024-04-28 19:29:21]  workdir=None
[2024-04-28 19:29:21] ]
[2024-04-28 19:29:21] 2024-04-28 17:28:57,408 | INFO     | transferring file log.38204279._021299.job.log.tgz.1 from /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6182490735/log.38204279._021299.job.log.tgz.1 to /scratch/b
[2024-04-28 19:29:21] 2024-04-28 17:28:57,409 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6182490735/log.38204279._021299.job.log.tgz.1 /scratch/boinc/var/slot48/slots/0/lo
[2024-04-28 19:29:21] 2024-04-28 17:28:57,428 | INFO     | adding to output.list: log.38204279._021299.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/c7/log.38204279._021299.job.log.tg
[2024-04-28 19:29:21] 2024-04-28 17:28:57,429 | INFO     | summary of transferred files:
[2024-04-28 19:29:21] 2024-04-28 17:28:57,429 | INFO     |  -- lfn=log.38204279._021299.job.log.tgz.1, status_code=0, status=transferred
[2024-04-28 19:29:21] 2024-04-28 17:28:57,429 | INFO     | stage-out finished correctly
[2024-04-28 19:29:21] 2024-04-28 17:28:59,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-28 19:29:21] 2024-04-28 17:28:59,711 | INFO     | monitor loop #914: job 0:6182490735 is in state 'finished'
[2024-04-28 19:29:21] 2024-04-28 17:28:59,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 19:29:21] 2024-04-28 17:29:01,279 | INFO     | job 6182490735 has state=finished
[2024-04-28 19:29:21] 2024-04-28 17:29:01,280 | INFO     | preparing for final server update for job 6182490735 in state='finished'
[2024-04-28 19:29:21] 2024-04-28 17:29:01,280 | INFO     | this job has now completed (state=finished)
[2024-04-28 19:29:21] 2024-04-28 17:29:01,280 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-28 19:29:21] 2024-04-28 17:29:01,280 | INFO     | job 6182490735 has finished - writing final server update
[2024-04-28 19:29:21] 2024-04-28 17:29:01,281 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_720693/.job.ad'
[2024-04-28 19:29:21] 2024-04-28 17:29:01,281 | INFO     | total number of processed events: 400 (read)
[2024-04-28 19:29:21] 2024-04-28 17:29:01,284 | INFO     | executing command: lscpu
[2024-04-28 19:29:21] 2024-04-28 17:29:01,327 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-28 19:29:21] 2024-04-28 17:29:01,328 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-28 19:29:21] 2024-04-28 17:29:01,362 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-28 19:29:21] 2024-04-28 17:29:01,954 | INFO     | 11914s have passed since pilot start
[2024-04-28 19:29:21] 2024-04-28 17:29:02,214 | INFO     | monitor loop #915: job 0:6182490735 is in state 'finished'
[2024-04-28 19:29:21] 2024-04-28 17:29:02,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,321 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-28 19:29:21] 2024-04-28 17:29:04,321 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6182490735/memory_monitor_summary.json (trf name=prmon)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,322 | INFO     | extracted standard info from prmon json
[2024-04-28 19:29:21] 2024-04-28 17:29:04,322 | INFO     | extracted standard memory fields from prmon json
[2024-04-28 19:29:21] 2024-04-28 17:29:04,322 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-28 19:29:21] 2024-04-28 17:29:04,322 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-28 19:29:21] 2024-04-28 17:29:04,324 | INFO     | fitting pss+swap vs Time
[2024-04-28 19:29:21] 2024-04-28 17:29:04,326 | INFO     | current chi2=4.204640275381404 (change=0.017277810791614567 %)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,326 | INFO     | right removable region: 189
[2024-04-28 19:29:21] 2024-04-28 17:29:04,327 | INFO     | current chi2=1.715203796800096 (change=59.21393187487759 %)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,327 | INFO     | current chi2=0.09031978499448041 (change=94.73416598290058 %)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,328 | INFO     | current chi2=0.0011764118323029343 (change=98.69750372814237 %)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,329 | INFO     | current chi2=0.0008742270562956391 (change=25.686988834151787 %)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,330 | INFO     | current chi2=0.000841537796486108 (change=3.7392184986867445 %)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,330 | INFO     | left removable region: 50
[2024-04-28 19:29:21] 2024-04-28 17:29:04,330 | INFO     | current memory leak: 0.17 B/s (using 139 data points, chi2=0.00)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,330 | INFO     | ..............................
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | . Timing measurements:
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | . get job = 0 s
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | . initial setup = 1 s
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | . payload setup = 4 s
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | . stage-in = 0 s
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | . payload execution = 11884 s
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | . stage-out = 0 s
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | . log creation = 0 s
[2024-04-28 19:29:21] 2024-04-28 17:29:04,331 | INFO     | ..............................
[2024-04-28 19:29:21] 2024-04-28 17:29:04,584 | INFO     | 
[2024-04-28 19:29:21] 2024-04-28 17:29:04,584 | INFO     | job summary report
[2024-04-28 19:29:21] 2024-04-28 17:29:04,584 | INFO     | --------------------------------------------------
[2024-04-28 19:29:21] 2024-04-28 17:29:04,584 | INFO     | PanDA job id: 6182490735
[2024-04-28 19:29:21] 2024-04-28 17:29:04,584 | INFO     | task id: 38204279
[2024-04-28 19:29:21] 2024-04-28 17:29:04,584 | INFO     | errors: (none)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,584 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | pilot state: finished 
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | transexitcode: 0
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | exeerrorcode: 0
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | exeerrordiag: 
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | exitcode: 0
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | exitmsg: OK
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | cpuconsumptiontime: 44608 s
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | nevents: 400
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | neventsw: 0
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | pid: 1747449
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | pgrp: 1747449
[2024-04-28 19:29:21] 2024-04-28 17:29:04,585 | INFO     | corecount: 4
[2024-04-28 19:29:21] 2024-04-28 17:29:04,586 | INFO     | event service: False
[2024-04-28 19:29:21] 2024-04-28 17:29:04,586 | INFO     | sizes: {0: 2375468, 1: 2375667, 4: 2375873, 11: 2375901, 11893: 2405534, 11894: 2414516, 11896: 2414700, 11901: 2414870}
[2024-04-28 19:29:21] 2024-04-28 17:29:04,586 | INFO     | --------------------------------------------------
[2024-04-28 19:29:21] 2024-04-28 17:29:04,586 | INFO     | 
[2024-04-28 19:29:21] 2024-04-28 17:29:04,586 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2024-04-28 19:29:21] 2024-04-28 17:29:04,606 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,608 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-28 19:29:21] 2024-04-28 17:29:04,608 | INFO     | job 6182490735 has completed (purged errors)
[2024-04-28 19:29:21] 2024-04-28 17:29:04,608 | INFO     | overall cleanup function is called
[2024-04-28 19:29:21] 2024-04-28 17:29:05,614 | INFO     | --- collectZombieJob: --- 10, [1747449]
[2024-04-28 19:29:21] 2024-04-28 17:29:05,614 | INFO     | zombie collector waiting for pid 1747449
[2024-04-28 19:29:21] 2024-04-28 17:29:05,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-28 19:29:21] 2024-04-28 17:29:06,619 | INFO     | collected zombie processes
[2024-04-28 19:29:21] 2024-04-28 17:29:06,620 | INFO     | will now attempt to kill all subprocesses of pid=1747449
[2024-04-28 19:29:21] 2024-04-28 17:29:06,779 | INFO     | process IDs to be killed: [1747449] (in reverse order)
[2024-04-28 19:29:21] 2024-04-28 17:29:06,878 | WARNING  | found no corresponding commands to process id(s)
[2024-04-28 19:29:21] 2024-04-28 17:29:06,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-28 19:29:21] 2024-04-28 17:29:06,885 | INFO     | did not find any defunct processes belonging to 1747449
[2024-04-28 19:29:21] 2024-04-28 17:29:06,891 | INFO     | did not find any defunct processes belonging to 1747449
[2024-04-28 19:29:21] 2024-04-28 17:29:06,891 | INFO     | ready for new job
[2024-04-28 19:29:21] 2024-04-28 17:29:06,891 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-28 19:29:21] 2024-04-28 17:29:06,892 | INFO     | *************************************
[2024-04-28 19:29:21] 2024-04-28 17:29:06,892 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-28 19:29:21] 2024-04-28 17:29:06,892 | INFO     | *************************************
[2024-04-28 19:29:21] 2024-04-28 17:29:06,893 | INFO     | 
[2024-04-28 19:29:21] 2024-04-28 17:29:06,895 | INFO     | architecture information:
[2024-04-28 19:29:21] 2024-04-28 17:29:06,895 | INFO     | executing command: cat /etc/os-release
[2024-04-28 19:29:21] 2024-04-28 17:29:06,910 | INFO     | cat /etc/os-release:
[2024-04-28 19:29:21] NAME="CentOS Linux"
[2024-04-28 19:29:21] VERSION="7 (Core)"
[2024-04-28 19:29:21] ID="centos"
[2024-04-28 19:29:21] ID_LIKE="rhel fedora"
[2024-04-28 19:29:21] VERSION_ID="7"
[2024-04-28 19:29:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-28 19:29:21] ANSI_COLOR="0;31"
[2024-04-28 19:29:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-28 19:29:21] HOME_URL="https://www.centos.org/"
[2024-04-28 19:29:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-28 19:29:21] 
[2024-04-28 19:29:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-28 19:29:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-28 19:29:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-28 19:29:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-28 19:29:21] 
[2024-04-28 19:29:21] 2024-04-28 17:29:06,910 | INFO     | *************************************
[2024-04-28 19:29:21] 2024-04-28 17:29:07,413 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2024-04-28 19:29:21] 2024-04-28 17:29:07,438 | INFO     | sufficient remaining disk space (612828708864 B)
[2024-04-28 19:29:21] 2024-04-28 17:29:07,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-28 19:29:21] 2024-04-28 17:29:07,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-28 19:29:21] 2024-04-28 17:29:07,439 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-28 19:29:21] 2024-04-28 17:29:07,439 | INFO     | found 0 job(s) in 20 queues
[2024-04-28 19:29:21] 2024-04-28 17:29:07,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-28 19:29:21] 2024-04-28 17:29:07,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-28 19:29:21] 2024-04-28 17:29:07,842 | INFO     | all job control threads have been joined
[2024-04-28 19:29:21] 2024-04-28 17:29:07,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-28 19:29:21] 2024-04-28 17:29:07,996 | INFO     | all data control threads have been joined
[2024-04-28 19:29:21] 2024-04-28 17:29:08,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-28 19:29:21] 2024-04-28 17:29:08,229 | INFO     | aborting loop
[2024-04-28 19:29:21] 2024-04-28 17:29:08,382 | INFO     | all payload control threads have been joined
[2024-04-28 19:29:21] 2024-04-28 17:29:08,443 | INFO     | [job] retrieve thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:08,509 | INFO     | [payload] failed_post thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:08,636 | INFO     | [job] create_data_payload thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:08,847 | INFO     | [job] control thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:08,854 | INFO     | [payload] execute_payloads thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:09,001 | INFO     | [data] control thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:09,094 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:09,234 | INFO     | [job] job monitor thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:09,251 | INFO     | [data] copytool_in thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:09,387 | INFO     | [payload] control thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:09,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-28 19:29:21] 2024-04-28 17:29:09,581 | INFO     | [job] validate thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:09,695 | INFO     | [payload] validate_post thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:09,802 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-28 19:29:21] 2024-04-28 17:29:09,937 | INFO     | [payload] validate_pre thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:10,001 | INFO     | [data] copytool_out thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:10,401 | INFO     | [job] queue monitor thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:13,811 | INFO     | [data] queue_monitor thread has finished
[2024-04-28 19:29:21] 2024-04-28 17:29:15,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47715955315776)>', '<ExcThread(monitor, started 47716128651008)>']
[2024-04-28 19:29:21] 2024-04-28 17:29:15,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-28 19:29:21] 2024-04-28 17:29:15,479 | INFO     | [monitor] control thread has ended
[2024-04-28 19:29:21] 2024-04-28 17:29:20,075 | INFO     | all workflow threads have been joined
[2024-04-28 19:29:21] 2024-04-28 17:29:20,076 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-28 19:29:21] 2024-04-28 17:29:20,076 | INFO     | traces error code: 0
[2024-04-28 19:29:21] 2024-04-28 17:29:20,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-28 19:29:21] 2024-04-28 17:29:20,147 [wrapper] ==== pilot stdout END ====
[2024-04-28 19:29:21] 2024-04-28 17:29:20,149 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-28 19:29:21] 2024-04-28 17:29:20,151 [wrapper] pilotpid: 1735924
[2024-04-28 19:29:21] 2024-04-28 17:29:20,153 [wrapper] Pilot exit status: 0
[2024-04-28 19:29:21] 2024-04-28 17:29:20,159 [wrapper] pandaids: 6182490735
[2024-04-28 19:29:21] 2024-04-28 17:29:20,214 [wrapper] cleanup: SIGTERM to supervisor_pilot 2299621 1735925
[2024-04-28 19:29:21] 2024-04-28 17:29:20,216 [wrapper] Test setup, not cleaning
[2024-04-28 19:29:21] 2024-04-28 17:29:20,218 [wrapper] ==== wrapper stdout END ====
[2024-04-28 19:29:21] 2024-04-28 17:29:20,220 [wrapper] ==== wrapper stderr END ====
[2024-04-28 19:29:21] 2024-04-28 17:29:20,224 [wrapper] apfmon messages muted
[2024-04-28 19:29:21]  *** Error codes and diagnostics ***
[2024-04-28 19:29:21]     "exeErrorCode": 0,
[2024-04-28 19:29:21]     "exeErrorDiag": "",
[2024-04-28 19:29:21]     "pilotErrorCode": 0,
[2024-04-28 19:29:21]     "pilotErrorDiag": "",
[2024-04-28 19:29:21]  *** Listing of results directory ***
[2024-04-28 19:29:21] total 623752
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc      6720 Apr 21 15:37 queuedata.json
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc    462745 Apr 21 15:37 pilot3.tar.gz
[2024-04-28 19:29:21] -rwx------ 1 boinc boinc     32211 Apr 21 15:37 runpilot2-wrapper.sh
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc       100 Apr 28 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-28 19:29:21] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 16:10 run_atlas
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc       105 Apr 28 16:10 job.xml
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc      6662 Apr 28 16:10 init_data.xml
[2024-04-28 19:29:21] -rw-r--r-- 2 boinc boinc 453240267 Apr 28 16:10 EVNT.38204277._000805.pool.root.1
[2024-04-28 19:29:21] drwxrwx--x 2 boinc boinc      4096 Apr 28 16:10 shared
[2024-04-28 19:29:21] -rw-r--r-- 2 boinc boinc    474797 Apr 28 16:10 input.tar.gz
[2024-04-28 19:29:21] -rw-r--r-- 2 boinc boinc     17537 Apr 28 16:10 start_atlas.sh
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc         0 Apr 28 16:10 boinc_lockfile
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc      2583 Apr 28 16:10 pandaJob.out
[2024-04-28 19:29:21] -rw------- 1 boinc boinc       424 Apr 28 16:10 setup.sh.local
[2024-04-28 19:29:21] -rw------- 1 boinc boinc   1000594 Apr 28 16:10 agis_schedconf.cvmfs.json
[2024-04-28 19:29:21] -rw------- 1 boinc boinc   1315307 Apr 28 16:10 cric_ddmendpoints.json
[2024-04-28 19:29:21] drwx------ 4 boinc boinc      4096 Apr 28 16:10 pilot3
[2024-04-28 19:29:21] -rw------- 1 boinc boinc 179120153 Apr 28 19:28 HITS.38204279._021299.pool.root.1
[2024-04-28 19:29:21] -rw------- 1 boinc boinc      1055 Apr 28 19:28 memory_monitor_summary.json
[2024-04-28 19:29:21] -rw------- 1 boinc boinc         0 Apr 28 19:28 agis_ddmendpoints.agis.ALL.json
[2024-04-28 19:29:21] -rw------- 1 boinc boinc    300611 Apr 28 19:28 log.38204279._021299.job.log.tgz.1
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc       531 Apr 28 19:28 boinc_task_state.xml
[2024-04-28 19:29:21] -rw------- 1 boinc boinc        95 Apr 28 19:29 pilot_heartbeat.json
[2024-04-28 19:29:21] -rw------- 1 boinc boinc      7748 Apr 28 19:29 heartbeat.json
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc        28 Apr 28 19:29 wrapper_checkpoint.txt
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc      8192 Apr 28 19:29 boinc_mmap_file
[2024-04-28 19:29:21] -rw------- 1 boinc boinc      4344 Apr 28 19:29 pilotlog.txt
[2024-04-28 19:29:21] -rw------- 1 boinc boinc   1130948 Apr 28 19:29 log.38204279._021299.job.log.1
[2024-04-28 19:29:21] -rw------- 1 boinc boinc       357 Apr 28 19:29 output.list
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc       620 Apr 28 19:29 runtime_log
[2024-04-28 19:29:21] -rw------- 1 boinc boinc   1454080 Apr 28 19:29 result.tar.gz
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc     11410 Apr 28 19:29 runtime_log.err
[2024-04-28 19:29:21] -rw------- 1 boinc boinc       658 Apr 28 19:29 a0SLDm5YmI5n9Rq4apoT9bVoABFKDmABFKDmtztZDmwYKKDmHt5VMo.diag
[2024-04-28 19:29:21] -rw-r--r-- 1 boinc boinc     21146 Apr 28 19:29 stderr.txt
[2024-04-28 19:29:21] HITS file was successfully produced:
[2024-04-28 19:29:21] -rw------- 1 boinc boinc 179120153 Apr 28 19:28 shared/HITS.pool.root.1
[2024-04-28 19:29:21]  *** Contents of shared directory: ***
[2024-04-28 19:29:21] total 619456
[2024-04-28 19:29:21] -rw-r--r-- 2 boinc boinc 453240267 Apr 28 16:10 ATLAS.root_0
[2024-04-28 19:29:21] -rw-r--r-- 2 boinc boinc    474797 Apr 28 16:10 input.tar.gz
[2024-04-28 19:29:21] -rw-r--r-- 2 boinc boinc     17537 Apr 28 16:10 start_atlas.sh
[2024-04-28 19:29:21] -rw------- 1 boinc boinc 179120153 Apr 28 19:28 HITS.pool.root.1
[2024-04-28 19:29:21] -rw------- 1 boinc boinc   1454080 Apr 28 19:29 result.tar.gz
19:29:22 (1731583): run_atlas exited; CPU time 44334.051191
19:29:22 (1731583): called boinc_finish(0)

</stderr_txt>
]]>

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