Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:17:54 (3480978): wrapper (7.7.26015): starting
18:17:54 (3480978): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 18:17:54] Arguments: --nthreads 4
[2024-04-26 18:17:54] Threads: 4
[2024-04-26 18:17:54] Checking for CVMFS
[2024-04-26 18:17:54] No cvmfs_config command found, will try listing directly
[2024-04-26 18:17:54] CVMFS is ok
[2024-04-26 18:17:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 18:17:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 18:17:54] Further information can be found at the LHC@home message board.
[2024-04-26 18:17:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 18:17:54] Checking for apptainer binary...
[2024-04-26 18:17:54] which: no apptainer in ((null))
[2024-04-26 18:17:54] apptainer is not installed, using version from CVMFS
[2024-04-26 18:17:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 18:17:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-04-26 18:17:55] apptainer works
[2024-04-26 18:17:55] Set ATHENA_PROC_NUMBER=4
[2024-04-26 18:17:55] Set ATHENA_CORE_NUMBER=4
[2024-04-26 18:17:55] Starting ATLAS job with PandaID=6182222438
[2024-04-26 18:17:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 21:27:53]  *** The last 200 lines of the pilot log: ***
[2024-04-26 21:27:53]  domain=
[2024-04-26 21:27:53]  filesize=305385
[2024-04-26 21:27:53]  filetype=log
[2024-04-26 21:27:53]  guid=5f7403c8-724a-4e23-a9c1-928c325e04c7
[2024-04-26 21:27:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 21:27:53]  is_tar=False
[2024-04-26 21:27:53]  lfn=log.38204263._000512.job.log.tgz.1
[2024-04-26 21:27:53]  mtime=0
[2024-04-26 21:27:53]  protocol_id=None
[2024-04-26 21:27:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 21:27:53]  replicas=None
[2024-04-26 21:27:53]  scope=mc23_13p6TeV
[2024-04-26 21:27:53]  status=None
[2024-04-26 21:27:53]  status_code=0
[2024-04-26 21:27:53]  storage_token=
[2024-04-26 21:27:53]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6182222438/log.38204263._000512.job.log.tgz.1
[2024-04-26 21:27:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/96/log.38204263._000512.job.log.tgz.1
[2024-04-26 21:27:53]  workdir=None
[2024-04-26 21:27:53] ]
[2024-04-26 21:27:53] 2024-04-26 19:27:25,387 | INFO     | transferring file log.38204263._000512.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6182222438/log.38204263._000512.job.log.tgz.1 to /scratch/b
[2024-04-26 21:27:53] 2024-04-26 19:27:25,387 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6182222438/log.38204263._000512.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2024-04-26 21:27:53] 2024-04-26 19:27:25,402 | INFO     | adding to output.list: log.38204263._000512.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/96/log.38204263._000512.job.log.tg
[2024-04-26 21:27:53] 2024-04-26 19:27:25,403 | INFO     | summary of transferred files:
[2024-04-26 21:27:53] 2024-04-26 19:27:25,403 | INFO     |  -- lfn=log.38204263._000512.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 21:27:53] 2024-04-26 19:27:25,403 | INFO     | stage-out finished correctly
[2024-04-26 21:27:53] 2024-04-26 19:27:25,460 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 21:27:53] 2024-04-26 19:27:26,977 | INFO     | monitor loop #873: job 0:6182222438 is in state 'finished'
[2024-04-26 21:27:53] 2024-04-26 19:27:26,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 21:27:53] 2024-04-26 19:27:28,112 | INFO     | job 6182222438 has state=finished
[2024-04-26 21:27:53] 2024-04-26 19:27:28,112 | INFO     | preparing for final server update for job 6182222438 in state='finished'
[2024-04-26 21:27:53] 2024-04-26 19:27:28,113 | INFO     | this job has now completed (state=finished)
[2024-04-26 21:27:53] 2024-04-26 19:27:28,113 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 21:27:53] 2024-04-26 19:27:28,113 | INFO     | job 6182222438 has finished - writing final server update
[2024-04-26 21:27:53] 2024-04-26 19:27:28,113 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3165612/.job.ad'
[2024-04-26 21:27:53] 2024-04-26 19:27:28,114 | INFO     | total number of processed events: 400 (read)
[2024-04-26 21:27:53] 2024-04-26 19:27:28,118 | INFO     | executing command: lscpu
[2024-04-26 21:27:53] 2024-04-26 19:27:28,162 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 21:27:53] 2024-04-26 19:27:28,163 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 21:27:53] 2024-04-26 19:27:28,195 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 21:27:53] 2024-04-26 19:27:29,480 | INFO     | monitor loop #874: job 0:6182222438 is in state 'finished'
[2024-04-26 21:27:53] 2024-04-26 19:27:29,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,336 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 21:27:53] 2024-04-26 19:27:31,336 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6182222438/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,337 | INFO     | extracted standard info from prmon json
[2024-04-26 21:27:53] 2024-04-26 19:27:31,337 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 21:27:53] 2024-04-26 19:27:31,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 21:27:53] 2024-04-26 19:27:31,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 21:27:53] 2024-04-26 19:27:31,339 | INFO     | fitting pss+swap vs Time
[2024-04-26 21:27:53] 2024-04-26 19:27:31,341 | INFO     | current chi2=3.9406847017694764 (change=-0.02460004906917805 %)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,341 | INFO     | right removable region: 180
[2024-04-26 21:27:53] 2024-04-26 19:27:31,342 | INFO     | current chi2=1.5578783249048942 (change=60.45708597194908 %)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,342 | INFO     | current chi2=0.08613829708574496 (change=94.47079430346375 %)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,343 | INFO     | current chi2=0.009330240333942289 (change=89.16830184760367 %)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,344 | INFO     | current chi2=0.00912587435041311 (change=2.1903614077948155 %)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,344 | INFO     | left removable region: 40
[2024-04-26 21:27:53] 2024-04-26 19:27:31,344 | INFO     | current memory leak: -4.38 B/s (using 140 data points, chi2=0.01)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | ..............................
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | . Timing measurements:
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | . get job = 0 s
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | . initial setup = 1 s
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | . payload setup = 4 s
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | . stage-in = 0 s
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | . payload execution = 11337 s
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | . stage-out = 1 s
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | . log creation = 0 s
[2024-04-26 21:27:53] 2024-04-26 19:27:31,345 | INFO     | ..............................
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | 
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | job summary report
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | --------------------------------------------------
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | PanDA job id: 6182222438
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | task id: 38204263
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | errors: (none)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | pilot state: finished 
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | transexitcode: 0
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | exeerrorcode: 0
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | exeerrordiag: 
[2024-04-26 21:27:53] 2024-04-26 19:27:31,397 | INFO     | exitcode: 0
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | exitmsg: OK
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | cpuconsumptiontime: 42465 s
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | nevents: 400
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | neventsw: 0
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | pid: 3492483
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | pgrp: 3492483
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | corecount: 4
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | event service: False
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | sizes: {0: 2375661, 3: 2375867, 11: 2375895, 11345: 2405142, 11347: 2414180, 11353: 2414294}
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | --------------------------------------------------
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | 
[2024-04-26 21:27:53] 2024-04-26 19:27:31,398 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-04-26 21:27:53] 2024-04-26 19:27:31,413 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,415 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,415 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 21:27:53] 2024-04-26 19:27:31,415 | INFO     | job 6182222438 has completed (purged errors)
[2024-04-26 21:27:53] 2024-04-26 19:27:31,415 | INFO     | overall cleanup function is called
[2024-04-26 21:27:53] 2024-04-26 19:27:32,421 | INFO     | --- collectZombieJob: --- 10, [3492483]
[2024-04-26 21:27:53] 2024-04-26 19:27:32,422 | INFO     | zombie collector waiting for pid 3492483
[2024-04-26 21:27:53] 2024-04-26 19:27:32,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 21:27:53] 2024-04-26 19:27:33,426 | INFO     | collected zombie processes
[2024-04-26 21:27:53] 2024-04-26 19:27:33,426 | INFO     | will now attempt to kill all subprocesses of pid=3492483
[2024-04-26 21:27:53] 2024-04-26 19:27:33,559 | INFO     | process IDs to be killed: [3492483] (in reverse order)
[2024-04-26 21:27:53] 2024-04-26 19:27:33,652 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 21:27:53] 2024-04-26 19:27:33,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 21:27:53] 2024-04-26 19:27:33,658 | INFO     | did not find any defunct processes belonging to 3492483
[2024-04-26 21:27:53] 2024-04-26 19:27:33,664 | INFO     | did not find any defunct processes belonging to 3492483
[2024-04-26 21:27:53] 2024-04-26 19:27:33,664 | INFO     | ready for new job
[2024-04-26 21:27:53] 2024-04-26 19:27:33,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 21:27:53] 2024-04-26 19:27:33,665 | INFO     | *************************************
[2024-04-26 21:27:53] 2024-04-26 19:27:33,665 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 21:27:53] 2024-04-26 19:27:33,665 | INFO     | *************************************
[2024-04-26 21:27:53] 2024-04-26 19:27:33,665 | INFO     | 
[2024-04-26 21:27:53] 2024-04-26 19:27:33,668 | INFO     | architecture information:
[2024-04-26 21:27:53] 2024-04-26 19:27:33,668 | INFO     | executing command: cat /etc/os-release
[2024-04-26 21:27:53] 2024-04-26 19:27:33,683 | INFO     | cat /etc/os-release:
[2024-04-26 21:27:53] NAME="CentOS Linux"
[2024-04-26 21:27:53] VERSION="7 (Core)"
[2024-04-26 21:27:53] ID="centos"
[2024-04-26 21:27:53] ID_LIKE="rhel fedora"
[2024-04-26 21:27:53] VERSION_ID="7"
[2024-04-26 21:27:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 21:27:53] ANSI_COLOR="0;31"
[2024-04-26 21:27:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 21:27:53] HOME_URL="https://www.centos.org/"
[2024-04-26 21:27:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 21:27:53] 
[2024-04-26 21:27:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 21:27:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 21:27:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 21:27:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 21:27:53] 
[2024-04-26 21:27:53] 2024-04-26 19:27:33,683 | INFO     | *************************************
[2024-04-26 21:27:53] 2024-04-26 19:27:34,186 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-04-26 21:27:53] 2024-04-26 19:27:34,205 | INFO     | sufficient remaining disk space (612521476096 B)
[2024-04-26 21:27:53] 2024-04-26 19:27:34,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 21:27:53] 2024-04-26 19:27:34,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 21:27:53] 2024-04-26 19:27:34,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 21:27:53] 2024-04-26 19:27:34,206 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 21:27:53] 2024-04-26 19:27:34,206 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 21:27:53] 2024-04-26 19:27:34,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 21:27:53] 2024-04-26 19:27:34,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 21:27:53] 2024-04-26 19:27:34,489 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-26 21:27:53] 2024-04-26 19:27:34,490 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-26 21:27:53] 2024-04-26 19:27:34,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 21:27:53] 2024-04-26 19:27:34,490 | INFO     | will abort loop
[2024-04-26 21:27:53] 2024-04-26 19:27:34,894 | INFO     | all data control threads have been joined
[2024-04-26 21:27:53] 2024-04-26 19:27:35,087 | INFO     | all job control threads have been joined
[2024-04-26 21:27:53] 2024-04-26 19:27:35,210 | INFO     | [job] retrieve thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:35,331 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:35,397 | INFO     | all payload control threads have been joined
[2024-04-26 21:27:53] 2024-04-26 19:27:35,496 | INFO     | [job] job monitor thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:35,764 | INFO     | [payload] validate_post thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:35,793 | INFO     | [data] copytool_in thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:35,796 | INFO     | [payload] failed_post thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:35,901 | INFO     | [data] control thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:36,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 21:27:53] 2024-04-26 19:27:36,088 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:36,090 | INFO     | [job] control thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:36,211 | INFO     | [data] copytool_out thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:36,402 | INFO     | [payload] control thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:36,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 21:27:53] 2024-04-26 19:27:36,406 | INFO     | [job] validate thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:36,632 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:37,408 | INFO     | [job] queue monitor thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:40,023 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:45,244 | INFO     | job.realtimelogging is not enabled
[2024-04-26 21:27:53] 2024-04-26 19:27:46,247 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 21:27:53] 2024-04-26 19:27:47,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47066397631552)>', '<ExcThread(monitor, started 47066575169280)>']
[2024-04-26 21:27:53] 2024-04-26 19:27:48,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 21:27:53] 2024-04-26 19:27:48,273 | INFO     | [monitor] control thread has ended
[2024-04-26 21:27:53] 2024-04-26 19:27:52,335 | INFO     | all workflow threads have been joined
[2024-04-26 21:27:53] 2024-04-26 19:27:52,335 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 21:27:53] 2024-04-26 19:27:52,335 | INFO     | traces error code: 0
[2024-04-26 21:27:53] 2024-04-26 19:27:52,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 21:27:53] 2024-04-26 19:27:52,407 [wrapper] ==== pilot stdout END ====
[2024-04-26 21:27:53] 2024-04-26 19:27:52,409 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 21:27:53] 2024-04-26 19:27:52,411 [wrapper] pilotpid: 3485355
[2024-04-26 21:27:53] 2024-04-26 19:27:52,413 [wrapper] Pilot exit status: 0
[2024-04-26 21:27:53] 2024-04-26 19:27:52,421 [wrapper] pandaids: 6182222438
[2024-04-26 21:27:53] 2024-04-26 19:27:52,494 [wrapper] cleanup: SIGTERM to supervisor_pilot 4023906 3485356
[2024-04-26 21:27:53] 2024-04-26 19:27:52,496 [wrapper] Test setup, not cleaning
[2024-04-26 21:27:53] 2024-04-26 19:27:52,498 [wrapper] ==== wrapper stdout END ====
[2024-04-26 21:27:53] 2024-04-26 19:27:52,500 [wrapper] ==== wrapper stderr END ====
[2024-04-26 21:27:53] 2024-04-26 19:27:52,504 [wrapper] apfmon messages muted
[2024-04-26 21:27:53]  *** Error codes and diagnostics ***
[2024-04-26 21:27:53]     "exeErrorCode": 0,
[2024-04-26 21:27:53]     "exeErrorDiag": "",
[2024-04-26 21:27:53]     "pilotErrorCode": 0,
[2024-04-26 21:27:53]     "pilotErrorDiag": "",
[2024-04-26 21:27:53]  *** Listing of results directory ***
[2024-04-26 21:27:53] total 708672
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc      6720 Apr 21 11:35 queuedata.json
[2024-04-26 21:27:53] -rwx------ 1 boinc boinc     32211 Apr 21 11:35 runpilot2-wrapper.sh
[2024-04-26 21:27:53] -rw------- 1 boinc boinc    468593 Apr 21 11:35 pilot3.tar.gz
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc       100 Apr 26 18:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 21:27:53] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 18:17 run_atlas
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc       105 Apr 26 18:17 job.xml
[2024-04-26 21:27:53] -rw-r--r-- 2 boinc boinc 520927873 Apr 26 18:17 EVNT.38204261._000021.pool.root.1
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc      6663 Apr 26 18:17 init_data.xml
[2024-04-26 21:27:53] drwxrwx--x 2 boinc boinc      4096 Apr 26 18:17 shared
[2024-04-26 21:27:53] -rw-r--r-- 2 boinc boinc    481413 Apr 26 18:17 input.tar.gz
[2024-04-26 21:27:53] -rw-r--r-- 2 boinc boinc     17537 Apr 26 18:17 start_atlas.sh
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc         0 Apr 26 18:17 boinc_lockfile
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc      2647 Apr 26 18:17 pandaJob.out
[2024-04-26 21:27:53] -rw------- 1 boinc boinc       424 Apr 26 18:17 setup.sh.local
[2024-04-26 21:27:53] -rw------- 1 boinc boinc    997397 Apr 26 18:18 agis_schedconf.cvmfs.json
[2024-04-26 21:27:53] -rw------- 1 boinc boinc   1315307 Apr 26 18:18 cric_ddmendpoints.json
[2024-04-26 21:27:53] drwx------ 6 boinc boinc      4096 Apr 26 18:18 pilot3
[2024-04-26 21:27:53] -rw------- 1 boinc boinc        95 Apr 26 21:26 pilot_heartbeat.json
[2024-04-26 21:27:53] -rw------- 1 boinc boinc 198473599 Apr 26 21:26 HITS.38204263._000512.pool.root.1
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc       531 Apr 26 21:27 boinc_task_state.xml
[2024-04-26 21:27:53] -rw------- 1 boinc boinc      1052 Apr 26 21:27 memory_monitor_summary.json
[2024-04-26 21:27:53] -rw------- 1 boinc boinc         0 Apr 26 21:27 agis_ddmendpoints.agis.ALL.json
[2024-04-26 21:27:53] -rw------- 1 boinc boinc    305385 Apr 26 21:27 log.38204263._000512.job.log.tgz.1
[2024-04-26 21:27:53] -rw------- 1 boinc boinc      7740 Apr 26 21:27 heartbeat.json
[2024-04-26 21:27:53] -rw------- 1 boinc boinc      4602 Apr 26 21:27 pilotlog.txt
[2024-04-26 21:27:53] -rw------- 1 boinc boinc   1082918 Apr 26 21:27 log.38204263._000512.job.log.1
[2024-04-26 21:27:53] -rw------- 1 boinc boinc       357 Apr 26 21:27 output.list
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc       620 Apr 26 21:27 runtime_log
[2024-04-26 21:27:53] -rw------- 1 boinc boinc   1402880 Apr 26 21:27 result.tar.gz
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc     11410 Apr 26 21:27 runtime_log.err
[2024-04-26 21:27:53] -rw------- 1 boinc boinc       658 Apr 26 21:27 1i6KDmtmiI5nsSi4apGgGQJmABFKDmABFKDmRLXKDmCSMKDmSXhuem.diag
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc      8192 Apr 26 21:27 boinc_mmap_file
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc        28 Apr 26 21:27 wrapper_checkpoint.txt
[2024-04-26 21:27:53] -rw-r--r-- 1 boinc boinc     21177 Apr 26 21:27 stderr.txt
[2024-04-26 21:27:53] HITS file was successfully produced:
[2024-04-26 21:27:53] -rw------- 1 boinc boinc 198473599 Apr 26 21:26 shared/HITS.pool.root.1
[2024-04-26 21:27:53]  *** Contents of shared directory: ***
[2024-04-26 21:27:53] total 704416
[2024-04-26 21:27:53] -rw-r--r-- 2 boinc boinc 520927873 Apr 26 18:17 ATLAS.root_0
[2024-04-26 21:27:53] -rw-r--r-- 2 boinc boinc    481413 Apr 26 18:17 input.tar.gz
[2024-04-26 21:27:53] -rw-r--r-- 2 boinc boinc     17537 Apr 26 18:17 start_atlas.sh
[2024-04-26 21:27:53] -rw------- 1 boinc boinc 198473599 Apr 26 21:26 HITS.pool.root.1
[2024-04-26 21:27:53] -rw------- 1 boinc boinc   1402880 Apr 26 21:27 result.tar.gz
21:27:54 (3480978): run_atlas exited; CPU time 42213.481905
21:27:54 (3480978): called boinc_finish(0)

</stderr_txt>
]]>

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