Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:42:32 (346982): wrapper (7.7.26015): starting
13:42:32 (346982): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 13:42:32] Arguments: --nthreads 4
[2024-04-26 13:42:32] Threads: 4
[2024-04-26 13:42:32] Checking for CVMFS
[2024-04-26 13:42:32] No cvmfs_config command found, will try listing directly
[2024-04-26 13:42:32] CVMFS is ok
[2024-04-26 13:42:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 13:42:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 13:42:32] Further information can be found at the LHC@home message board.
[2024-04-26 13:42:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 13:42:32] Checking for apptainer binary...
[2024-04-26 13:42:32] which: no apptainer in ((null))
[2024-04-26 13:42:32] apptainer is not installed, using version from CVMFS
[2024-04-26 13:42:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 13:42:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2024-04-26 13:42:33] apptainer works
[2024-04-26 13:42:33] Set ATHENA_PROC_NUMBER=4
[2024-04-26 13:42:33] Set ATHENA_CORE_NUMBER=4
[2024-04-26 13:42:33] Starting ATLAS job with PandaID=6182438544
[2024-04-26 13:42:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 18:41:20]  *** The last 200 lines of the pilot log: ***
[2024-04-26 18:41:20]  domain=
[2024-04-26 18:41:20]  filesize=362519
[2024-04-26 18:41:20]  filetype=log
[2024-04-26 18:41:20]  guid=ecb6ff04-e8f5-4122-8de1-3a82377cd18d
[2024-04-26 18:41:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 18:41:20]  is_tar=False
[2024-04-26 18:41:20]  lfn=log.38207267._000587.job.log.tgz.1
[2024-04-26 18:41:20]  mtime=0
[2024-04-26 18:41:20]  protocol_id=None
[2024-04-26 18:41:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 18:41:20]  replicas=None
[2024-04-26 18:41:20]  scope=mc23_13p6TeV
[2024-04-26 18:41:20]  status=None
[2024-04-26 18:41:20]  status_code=0
[2024-04-26 18:41:20]  storage_token=
[2024-04-26 18:41:20]  surl=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182438544/log.38207267._000587.job.log.tgz.1
[2024-04-26 18:41:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/b3/log.38207267._000587.job.log.tgz.1
[2024-04-26 18:41:20]  workdir=None
[2024-04-26 18:41:20] ]
[2024-04-26 18:41:20] 2024-04-26 16:40:53,336 | INFO     | transferring file log.38207267._000587.job.log.tgz.1 from /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182438544/log.38207267._000587.job.log.tgz.1 to /scratch/b
[2024-04-26 18:41:20] 2024-04-26 16:40:53,336 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182438544/log.38207267._000587.job.log.tgz.1 /scratch/boinc/var/slot32/slots/0/lo
[2024-04-26 18:41:20] 2024-04-26 16:40:53,351 | INFO     | adding to output.list: log.38207267._000587.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/b3/log.38207267._000587.job.log.tg
[2024-04-26 18:41:20] 2024-04-26 16:40:53,351 | INFO     | summary of transferred files:
[2024-04-26 18:41:20] 2024-04-26 16:40:53,351 | INFO     |  -- lfn=log.38207267._000587.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 18:41:20] 2024-04-26 16:40:53,351 | INFO     | stage-out finished correctly
[2024-04-26 18:41:20] 2024-04-26 16:40:53,409 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 18:41:20] 2024-04-26 16:40:53,886 | INFO     | monitor loop #1367: job 0:6182438544 is in state 'finished'
[2024-04-26 18:41:20] 2024-04-26 16:40:53,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 18:41:20] 2024-04-26 16:40:56,293 | INFO     | job 6182438544 has state=finished
[2024-04-26 18:41:20] 2024-04-26 16:40:56,294 | INFO     | preparing for final server update for job 6182438544 in state='finished'
[2024-04-26 18:41:20] 2024-04-26 16:40:56,294 | INFO     | this job has now completed (state=finished)
[2024-04-26 18:41:20] 2024-04-26 16:40:56,295 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 18:41:20] 2024-04-26 16:40:56,295 | INFO     | job 6182438544 has finished - writing final server update
[2024-04-26 18:41:20] 2024-04-26 16:40:56,295 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3772119/.job.ad'
[2024-04-26 18:41:20] 2024-04-26 16:40:56,295 | INFO     | total number of processed events: 400 (read)
[2024-04-26 18:41:20] 2024-04-26 16:40:56,298 | INFO     | executing command: lscpu
[2024-04-26 18:41:20] 2024-04-26 16:40:56,326 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-26 18:41:20] 2024-04-26 16:40:56,326 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 18:41:20] 2024-04-26 16:40:56,345 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 18:41:20] 2024-04-26 16:40:56,389 | INFO     | monitor loop #1368: job 0:6182438544 is in state 'finished'
[2024-04-26 18:41:20] 2024-04-26 16:40:56,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 18:41:20] 2024-04-26 16:40:58,893 | INFO     | monitor loop #1369: job 0:6182438544 is in state 'finished'
[2024-04-26 18:41:20] 2024-04-26 16:40:58,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,148 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 18:41:20] 2024-04-26 16:40:59,148 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182438544/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,149 | INFO     | extracted standard info from prmon json
[2024-04-26 18:41:20] 2024-04-26 16:40:59,149 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 18:41:20] 2024-04-26 16:40:59,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 18:41:20] 2024-04-26 16:40:59,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 18:41:20] 2024-04-26 16:40:59,156 | INFO     | fitting pss+swap vs Time
[2024-04-26 18:41:20] 2024-04-26 16:40:59,162 | INFO     | current chi2=3.824350116122038 (change=-0.010072360787783712 %)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,162 | INFO     | right removable region: 287
[2024-04-26 18:41:20] 2024-04-26 16:40:59,165 | INFO     | current chi2=1.4969825949736137 (change=60.85260682200219 %)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,168 | INFO     | current chi2=0.08628958117027387 (change=94.23576590268941 %)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,171 | INFO     | current chi2=0.010844446269568197 (change=87.43249634255493 %)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,172 | INFO     | current chi2=0.010129360726351054 (change=6.594025415791151 %)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,172 | INFO     | left removable region: 40
[2024-04-26 18:41:20] 2024-04-26 16:40:59,173 | INFO     | current memory leak: 1.28 B/s (using 247 data points, chi2=0.00)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | ..............................
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | . Timing measurements:
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | . get job = 0 s
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | . initial setup = 1 s
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | . payload setup = 4 s
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | . stage-in = 0 s
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | . payload execution = 17869 s
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | . stage-out = 0 s
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | . log creation = 0 s
[2024-04-26 18:41:20] 2024-04-26 16:40:59,174 | INFO     | ..............................
[2024-04-26 18:41:20] 2024-04-26 16:40:59,232 | INFO     | 
[2024-04-26 18:41:20] 2024-04-26 16:40:59,232 | INFO     | job summary report
[2024-04-26 18:41:20] 2024-04-26 16:40:59,232 | INFO     | --------------------------------------------------
[2024-04-26 18:41:20] 2024-04-26 16:40:59,233 | INFO     | PanDA job id: 6182438544
[2024-04-26 18:41:20] 2024-04-26 16:40:59,233 | INFO     | task id: 38207267
[2024-04-26 18:41:20] 2024-04-26 16:40:59,233 | INFO     | errors: (none)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,233 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 18:41:20] 2024-04-26 16:40:59,233 | INFO     | pilot state: finished 
[2024-04-26 18:41:20] 2024-04-26 16:40:59,233 | INFO     | transexitcode: 0
[2024-04-26 18:41:20] 2024-04-26 16:40:59,233 | INFO     | exeerrorcode: 0
[2024-04-26 18:41:20] 2024-04-26 16:40:59,234 | INFO     | exeerrordiag: 
[2024-04-26 18:41:20] 2024-04-26 16:40:59,234 | INFO     | exitcode: 0
[2024-04-26 18:41:20] 2024-04-26 16:40:59,234 | INFO     | exitmsg: OK
[2024-04-26 18:41:20] 2024-04-26 16:40:59,234 | INFO     | cpuconsumptiontime: 68095 s
[2024-04-26 18:41:20] 2024-04-26 16:40:59,234 | INFO     | nevents: 400
[2024-04-26 18:41:20] 2024-04-26 16:40:59,234 | INFO     | neventsw: 0
[2024-04-26 18:41:20] 2024-04-26 16:40:59,234 | INFO     | pid: 360683
[2024-04-26 18:41:20] 2024-04-26 16:40:59,235 | INFO     | pgrp: 360683
[2024-04-26 18:41:20] 2024-04-26 16:40:59,235 | INFO     | corecount: 4
[2024-04-26 18:41:20] 2024-04-26 16:40:59,235 | INFO     | event service: False
[2024-04-26 18:41:20] 2024-04-26 16:40:59,235 | INFO     | sizes: {0: 2375641, 4: 2375847, 11: 2375875, 17877: 2408088, 17878: 2417126, 17884: 2417240}
[2024-04-26 18:41:20] 2024-04-26 16:40:59,235 | INFO     | --------------------------------------------------
[2024-04-26 18:41:20] 2024-04-26 16:40:59,235 | INFO     | 
[2024-04-26 18:41:20] 2024-04-26 16:40:59,235 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-04-26 18:41:20] 2024-04-26 16:40:59,252 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | job 6182438544 has completed (purged errors)
[2024-04-26 18:41:20] 2024-04-26 16:40:59,254 | INFO     | overall cleanup function is called
[2024-04-26 18:41:20] 2024-04-26 16:41:00,260 | INFO     | --- collectZombieJob: --- 10, [360683]
[2024-04-26 18:41:20] 2024-04-26 16:41:00,261 | INFO     | zombie collector waiting for pid 360683
[2024-04-26 18:41:20] 2024-04-26 16:41:00,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 18:41:20] 2024-04-26 16:41:01,266 | INFO     | collected zombie processes
[2024-04-26 18:41:20] 2024-04-26 16:41:01,267 | INFO     | will now attempt to kill all subprocesses of pid=360683
[2024-04-26 18:41:20] 2024-04-26 16:41:01,410 | INFO     | process IDs to be killed: [360683] (in reverse order)
[2024-04-26 18:41:20] 2024-04-26 16:41:01,473 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 18:41:20] 2024-04-26 16:41:01,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 18:41:20] 2024-04-26 16:41:01,479 | INFO     | did not find any defunct processes belonging to 360683
[2024-04-26 18:41:20] 2024-04-26 16:41:01,484 | INFO     | did not find any defunct processes belonging to 360683
[2024-04-26 18:41:20] 2024-04-26 16:41:01,484 | INFO     | ready for new job
[2024-04-26 18:41:20] 2024-04-26 16:41:01,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 18:41:20] 2024-04-26 16:41:01,486 | INFO     | *************************************
[2024-04-26 18:41:20] 2024-04-26 16:41:01,487 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 18:41:20] 2024-04-26 16:41:01,487 | INFO     | *************************************
[2024-04-26 18:41:20] 2024-04-26 16:41:01,487 | INFO     | 
[2024-04-26 18:41:20] 2024-04-26 16:41:01,489 | INFO     | architecture information:
[2024-04-26 18:41:20] 2024-04-26 16:41:01,489 | INFO     | executing command: cat /etc/os-release
[2024-04-26 18:41:20] 2024-04-26 16:41:01,504 | INFO     | cat /etc/os-release:
[2024-04-26 18:41:20] NAME="CentOS Linux"
[2024-04-26 18:41:20] VERSION="7 (Core)"
[2024-04-26 18:41:20] ID="centos"
[2024-04-26 18:41:20] ID_LIKE="rhel fedora"
[2024-04-26 18:41:20] VERSION_ID="7"
[2024-04-26 18:41:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 18:41:20] ANSI_COLOR="0;31"
[2024-04-26 18:41:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 18:41:20] HOME_URL="https://www.centos.org/"
[2024-04-26 18:41:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 18:41:20] 
[2024-04-26 18:41:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 18:41:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 18:41:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 18:41:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 18:41:20] 
[2024-04-26 18:41:20] 2024-04-26 16:41:01,504 | INFO     | *************************************
[2024-04-26 18:41:20] 2024-04-26 16:41:02,006 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-04-26 18:41:20] 2024-04-26 16:41:02,021 | INFO     | sufficient remaining disk space (1644594987008 B)
[2024-04-26 18:41:20] 2024-04-26 16:41:02,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 18:41:20] 2024-04-26 16:41:02,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 18:41:20] 2024-04-26 16:41:02,021 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 18:41:20] 2024-04-26 16:41:02,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 18:41:20] 2024-04-26 16:41:02,022 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 18:41:20] 2024-04-26 16:41:02,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 18:41:20] 2024-04-26 16:41:02,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 18:41:20] 2024-04-26 16:41:02,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 18:41:20] 2024-04-26 16:41:02,402 | INFO     | aborting loop
[2024-04-26 18:41:20] 2024-04-26 16:41:03,003 | INFO     | all payload control threads have been joined
[2024-04-26 18:41:20] 2024-04-26 16:41:03,016 | INFO     | all data control threads have been joined
[2024-04-26 18:41:20] 2024-04-26 16:41:03,027 | INFO     | [job] retrieve thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:03,158 | INFO     | [payload] validate_post thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:03,183 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:03,272 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:03,406 | INFO     | [job] job monitor thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:03,441 | INFO     | all job control threads have been joined
[2024-04-26 18:41:20] 2024-04-26 16:41:03,969 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:03,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 18:41:20] 2024-04-26 16:41:03,990 | INFO     | [data] copytool_in thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:04,008 | INFO     | [payload] control thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:04,021 | INFO     | [data] control thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:04,027 | INFO     | [data] copytool_out thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:04,170 | INFO     | [payload] failed_post thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:04,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 18:41:20] 2024-04-26 16:41:04,272 | INFO     | [job] validate thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:04,445 | INFO     | [job] control thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:05,245 | INFO     | [job] queue monitor thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:07,985 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:12,483 | INFO     | job.realtimelogging is not enabled
[2024-04-26 18:41:20] 2024-04-26 16:41:13,488 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 18:41:20] 2024-04-26 16:41:14,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46986811630656)>', '<ExcThread(monitor, started 46986982864640)>']
[2024-04-26 18:41:20] 2024-04-26 16:41:15,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 18:41:20] 2024-04-26 16:41:15,079 | INFO     | [monitor] control thread has ended
[2024-04-26 18:41:20] 2024-04-26 16:41:20,002 | INFO     | all workflow threads have been joined
[2024-04-26 18:41:20] 2024-04-26 16:41:20,002 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 18:41:20] 2024-04-26 16:41:20,003 | INFO     | traces error code: 0
[2024-04-26 18:41:20] 2024-04-26 16:41:20,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 18:41:20] 2024-04-26 16:41:20,066 [wrapper] ==== pilot stdout END ====
[2024-04-26 18:41:20] 2024-04-26 16:41:20,068 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 18:41:20] 2024-04-26 16:41:20,070 [wrapper] pilotpid: 351706
[2024-04-26 18:41:20] 2024-04-26 16:41:20,072 [wrapper] Pilot exit status: 0
[2024-04-26 18:41:20] 2024-04-26 16:41:20,079 [wrapper] pandaids: 6182438544
[2024-04-26 18:41:20] 2024-04-26 16:41:20,117 [wrapper] cleanup: SIGTERM to supervisor_pilot  934586 351707
[2024-04-26 18:41:20] 2024-04-26 16:41:20,119 [wrapper] Test setup, not cleaning
[2024-04-26 18:41:20] 2024-04-26 16:41:20,121 [wrapper] ==== wrapper stdout END ====
[2024-04-26 18:41:20] 2024-04-26 16:41:20,122 [wrapper] ==== wrapper stderr END ====
[2024-04-26 18:41:20] 2024-04-26 16:41:20,126 [wrapper] apfmon messages muted
[2024-04-26 18:41:20]  *** Error codes and diagnostics ***
[2024-04-26 18:41:20]     "exeErrorCode": 0,
[2024-04-26 18:41:20]     "exeErrorDiag": "",
[2024-04-26 18:41:20]     "pilotErrorCode": 0,
[2024-04-26 18:41:20]     "pilotErrorDiag": "",
[2024-04-26 18:41:20]  *** Listing of results directory ***
[2024-04-26 18:41:20] total 793896
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc    462745 Apr 21 14:27 pilot3.tar.gz
[2024-04-26 18:41:20] -rwx------ 1 boinc boinc     32211 Apr 21 14:29 runpilot2-wrapper.sh
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc      6720 Apr 21 14:29 queuedata.json
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc       100 Apr 26 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 18:41:20] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 13:42 run_atlas
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc       105 Apr 26 13:42 job.xml
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc      6457 Apr 26 13:42 init_data.xml
[2024-04-26 18:41:20] -rw-r--r-- 2 boinc boinc 568178443 Apr 26 13:42 EVNT.38207265._000024.pool.root.1
[2024-04-26 18:41:20] -rw-r--r-- 2 boinc boinc     17537 Apr 26 13:42 start_atlas.sh
[2024-04-26 18:41:20] drwxrwx--x 2 boinc boinc      4096 Apr 26 13:42 shared
[2024-04-26 18:41:20] -rw-r--r-- 2 boinc boinc    474794 Apr 26 13:42 input.tar.gz
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc         0 Apr 26 13:42 boinc_lockfile
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc      2591 Apr 26 13:42 pandaJob.out
[2024-04-26 18:41:20] -rw------- 1 boinc boinc       424 Apr 26 13:42 setup.sh.local
[2024-04-26 18:41:20] -rw------- 1 boinc boinc    997814 Apr 26 13:42 agis_schedconf.cvmfs.json
[2024-04-26 18:41:20] -rw------- 1 boinc boinc   1315307 Apr 26 13:42 cric_ddmendpoints.json
[2024-04-26 18:41:20] drwx------ 4 boinc boinc      4096 Apr 26 13:42 pilot3
[2024-04-26 18:41:20] -rw------- 1 boinc boinc 237225408 Apr 26 18:40 HITS.38207267._000587.pool.root.1
[2024-04-26 18:41:20] -rw------- 1 boinc boinc        95 Apr 26 18:40 pilot_heartbeat.json
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc       532 Apr 26 18:40 boinc_task_state.xml
[2024-04-26 18:41:20] -rw------- 1 boinc boinc      1051 Apr 26 18:40 memory_monitor_summary.json
[2024-04-26 18:41:20] -rw------- 1 boinc boinc         0 Apr 26 18:40 agis_ddmendpoints.agis.ALL.json
[2024-04-26 18:41:20] -rw------- 1 boinc boinc    362519 Apr 26 18:40 log.38207267._000587.job.log.tgz.1
[2024-04-26 18:41:20] -rw------- 1 boinc boinc      7741 Apr 26 18:40 heartbeat.json
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc        28 Apr 26 18:41 wrapper_checkpoint.txt
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc      8192 Apr 26 18:41 boinc_mmap_file
[2024-04-26 18:41:20] -rw------- 1 boinc boinc      4417 Apr 26 18:41 pilotlog.txt
[2024-04-26 18:41:20] -rw------- 1 boinc boinc   1664309 Apr 26 18:41 log.38207267._000587.job.log.1
[2024-04-26 18:41:20] -rw------- 1 boinc boinc       357 Apr 26 18:41 output.list
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc       620 Apr 26 18:41 runtime_log
[2024-04-26 18:41:20] -rw------- 1 boinc boinc   2048000 Apr 26 18:41 result.tar.gz
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc     11410 Apr 26 18:41 runtime_log.err
[2024-04-26 18:41:20] -rw------- 1 boinc boinc       659 Apr 26 18:41 TLhMDmqUlI5n7Olcko1bjSoqABFKDmABFKDm2mFKDm6qGKDmK6RKvm.diag
[2024-04-26 18:41:20] -rw-r--r-- 1 boinc boinc     21195 Apr 26 18:41 stderr.txt
[2024-04-26 18:41:20] HITS file was successfully produced:
[2024-04-26 18:41:20] -rw------- 1 boinc boinc 237225408 Apr 26 18:40 shared/HITS.pool.root.1
[2024-04-26 18:41:20]  *** Contents of shared directory: ***
[2024-04-26 18:41:20] total 789024
[2024-04-26 18:41:20] -rw-r--r-- 2 boinc boinc 568178443 Apr 26 13:42 ATLAS.root_0
[2024-04-26 18:41:20] -rw-r--r-- 2 boinc boinc     17537 Apr 26 13:42 start_atlas.sh
[2024-04-26 18:41:20] -rw-r--r-- 2 boinc boinc    474794 Apr 26 13:42 input.tar.gz
[2024-04-26 18:41:20] -rw------- 1 boinc boinc 237225408 Apr 26 18:40 HITS.pool.root.1
[2024-04-26 18:41:20] -rw------- 1 boinc boinc   2048000 Apr 26 18:41 result.tar.gz
18:41:22 (346982): run_atlas exited; CPU time 67799.661749
18:41:22 (346982): called boinc_finish(0)

</stderr_txt>
]]>

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