Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:41:07 (380448): wrapper (7.7.26015): starting
14:41:07 (380448): wrapper: running run_atlas (--nthreads 4)
[2024-04-28 14:41:07] Arguments: --nthreads 4
[2024-04-28 14:41:07] Threads: 4
[2024-04-28 14:41:07] Checking for CVMFS
[2024-04-28 14:41:07] No cvmfs_config command found, will try listing directly
[2024-04-28 14:41:07] CVMFS is ok
[2024-04-28 14:41:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-28 14:41:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-28 14:41:07] Further information can be found at the LHC@home message board.
[2024-04-28 14:41:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-28 14:41:07] Checking for apptainer binary...
[2024-04-28 14:41:07] which: no apptainer in ((null))
[2024-04-28 14:41:07] apptainer is not installed, using version from CVMFS
[2024-04-28 14:41:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-28 14:41:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-04-28 14:41:08] apptainer works
[2024-04-28 14:41:08] Set ATHENA_PROC_NUMBER=4
[2024-04-28 14:41:08] Set ATHENA_CORE_NUMBER=4
[2024-04-28 14:41:08] Starting ATLAS job with PandaID=6182292114
[2024-04-28 14:41:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-28 17:55:30]  *** The last 200 lines of the pilot log: ***
[2024-04-28 17:55:30]  domain=
[2024-04-28 17:55:30]  filesize=300604
[2024-04-28 17:55:30]  filetype=log
[2024-04-28 17:55:30]  guid=d56cf7d5-57d7-467d-831f-cf779072a4ca
[2024-04-28 17:55:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-28 17:55:30]  is_tar=False
[2024-04-28 17:55:30]  lfn=log.38203151._008221.job.log.tgz.1
[2024-04-28 17:55:30]  mtime=0
[2024-04-28 17:55:30]  protocol_id=None
[2024-04-28 17:55:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-28 17:55:30]  replicas=None
[2024-04-28 17:55:30]  scope=mc23_13p6TeV
[2024-04-28 17:55:30]  status=None
[2024-04-28 17:55:30]  status_code=0
[2024-04-28 17:55:30]  storage_token=
[2024-04-28 17:55:30]  surl=/scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6182292114/log.38203151._008221.job.log.tgz.1
[2024-04-28 17:55:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/95/log.38203151._008221.job.log.tgz.1
[2024-04-28 17:55:30]  workdir=None
[2024-04-28 17:55:30] ]
[2024-04-28 17:55:30] 2024-04-28 15:55:00,857 | INFO     | transferring file log.38203151._008221.job.log.tgz.1 from /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6182292114/log.38203151._008221.job.log.tgz.1 to /scratch/b
[2024-04-28 17:55:30] 2024-04-28 15:55:00,858 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6182292114/log.38203151._008221.job.log.tgz.1 /scratch/boinc/var/slot80/slots/0/lo
[2024-04-28 17:55:30] 2024-04-28 15:55:00,878 | INFO     | adding to output.list: log.38203151._008221.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/95/log.38203151._008221.job.log.tg
[2024-04-28 17:55:30] 2024-04-28 15:55:00,878 | INFO     | summary of transferred files:
[2024-04-28 17:55:30] 2024-04-28 15:55:00,878 | INFO     |  -- lfn=log.38203151._008221.job.log.tgz.1, status_code=0, status=transferred
[2024-04-28 17:55:30] 2024-04-28 15:55:00,878 | INFO     | stage-out finished correctly
[2024-04-28 17:55:30] 2024-04-28 15:55:01,272 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-28 17:55:30] 2024-04-28 15:55:01,361 | WARNING  | process 395078 is no longer using CPU - aborting
[2024-04-28 17:55:30] 2024-04-28 15:55:01,362 | INFO     | will not send any job update
[2024-04-28 17:55:30] 2024-04-28 15:55:03,865 | INFO     | monitor loop #878: job 0:6182292114 is in state 'finished'
[2024-04-28 17:55:30] 2024-04-28 15:55:03,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 17:55:30] 2024-04-28 15:55:04,090 | INFO     | job 6182292114 has state=finished
[2024-04-28 17:55:30] 2024-04-28 15:55:04,090 | INFO     | preparing for final server update for job 6182292114 in state='finished'
[2024-04-28 17:55:30] 2024-04-28 15:55:04,091 | INFO     | this job has now completed (state=finished)
[2024-04-28 17:55:30] 2024-04-28 15:55:04,091 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-28 17:55:30] 2024-04-28 15:55:04,091 | INFO     | job 6182292114 has finished - writing final server update
[2024-04-28 17:55:30] 2024-04-28 15:55:04,091 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1664245/.job.ad'
[2024-04-28 17:55:30] 2024-04-28 15:55:04,091 | INFO     | total number of processed events: 400 (read)
[2024-04-28 17:55:30] 2024-04-28 15:55:04,100 | INFO     | executing command: lscpu
[2024-04-28 17:55:30] 2024-04-28 15:55:04,155 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-28 17:55:30] 2024-04-28 15:55:04,155 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-28 17:55:30] 2024-04-28 15:55:04,199 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-28 17:55:30] 2024-04-28 15:55:06,369 | INFO     | monitor loop #879: job 0:6182292114 is in state 'finished'
[2024-04-28 17:55:30] 2024-04-28 15:55:06,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 17:55:30] 2024-04-28 15:55:08,874 | INFO     | monitor loop #880: job 0:6182292114 is in state 'finished'
[2024-04-28 17:55:30] 2024-04-28 15:55:08,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,267 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-28 17:55:30] 2024-04-28 15:55:09,268 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6182292114/memory_monitor_summary.json (trf name=prmon)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,269 | INFO     | extracted standard info from prmon json
[2024-04-28 17:55:30] 2024-04-28 15:55:09,269 | INFO     | extracted standard memory fields from prmon json
[2024-04-28 17:55:30] 2024-04-28 15:55:09,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-28 17:55:30] 2024-04-28 15:55:09,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-28 17:55:30] 2024-04-28 15:55:09,273 | INFO     | fitting pss+swap vs Time
[2024-04-28 17:55:30] 2024-04-28 15:55:09,276 | INFO     | current chi2=4.228312519772452 (change=15.865562740021433 %)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,276 | INFO     | right removable region: 185
[2024-04-28 17:55:30] 2024-04-28 15:55:09,278 | INFO     | current chi2=2.4526953781326517 (change=51.196572049871534 %)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,279 | INFO     | current chi2=0.891787887038868 (change=63.64049547327697 %)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,280 | INFO     | current chi2=0.8407618655149449 (change=5.721766606782714 %)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,280 | INFO     | left removable region: 30
[2024-04-28 17:55:30] 2024-04-28 15:55:09,282 | INFO     | current memory leak: 2.13 B/s (using 155 data points, chi2=0.00)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | ..............................
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | . Timing measurements:
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | . get job = 0 s
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | . initial setup = 1 s
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | . payload setup = 5 s
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | . stage-in = 0 s
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | . payload execution = 11596 s
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | . stage-out = 0 s
[2024-04-28 17:55:30] 2024-04-28 15:55:09,283 | INFO     | . log creation = 0 s
[2024-04-28 17:55:30] 2024-04-28 15:55:09,284 | INFO     | ..............................
[2024-04-28 17:55:30] 2024-04-28 15:55:09,360 | INFO     | 
[2024-04-28 17:55:30] 2024-04-28 15:55:09,360 | INFO     | job summary report
[2024-04-28 17:55:30] 2024-04-28 15:55:09,360 | INFO     | --------------------------------------------------
[2024-04-28 17:55:30] 2024-04-28 15:55:09,360 | INFO     | PanDA job id: 6182292114
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | task id: 38203151
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | errors: (none)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | pilot state: finished 
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | transexitcode: 0
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | exeerrorcode: 0
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | exeerrordiag: 
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | exitcode: 0
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | exitmsg: OK
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | cpuconsumptiontime: 43423 s
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | nevents: 400
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | neventsw: 0
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | pid: 395078
[2024-04-28 17:55:30] 2024-04-28 15:55:09,361 | INFO     | pgrp: 395078
[2024-04-28 17:55:30] 2024-04-28 15:55:09,362 | INFO     | corecount: 4
[2024-04-28 17:55:30] 2024-04-28 15:55:09,362 | INFO     | event service: False
[2024-04-28 17:55:30] 2024-04-28 15:55:09,362 | INFO     | sizes: {0: 2375530, 1: 2375644, 5: 2375878, 11: 2375934, 11606: 2405202, 11608: 2414368, 11616: 2414482}
[2024-04-28 17:55:30] 2024-04-28 15:55:09,362 | INFO     | --------------------------------------------------
[2024-04-28 17:55:30] 2024-04-28 15:55:09,362 | INFO     | 
[2024-04-28 17:55:30] 2024-04-28 15:55:09,362 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2024-04-28 17:55:30] 2024-04-28 15:55:09,389 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-28 17:55:30] 2024-04-28 15:55:09,391 | INFO     | job 6182292114 has completed (purged errors)
[2024-04-28 17:55:30] 2024-04-28 15:55:09,392 | INFO     | overall cleanup function is called
[2024-04-28 17:55:30] 2024-04-28 15:55:10,399 | INFO     | --- collectZombieJob: --- 10, [395078]
[2024-04-28 17:55:30] 2024-04-28 15:55:10,399 | INFO     | zombie collector waiting for pid 395078
[2024-04-28 17:55:30] 2024-04-28 15:55:10,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-28 17:55:30] 2024-04-28 15:55:11,404 | INFO     | collected zombie processes
[2024-04-28 17:55:30] 2024-04-28 15:55:11,405 | INFO     | will now attempt to kill all subprocesses of pid=395078
[2024-04-28 17:55:30] 2024-04-28 15:55:11,626 | INFO     | process IDs to be killed: [395078] (in reverse order)
[2024-04-28 17:55:30] 2024-04-28 15:55:11,801 | WARNING  | found no corresponding commands to process id(s)
[2024-04-28 17:55:30] 2024-04-28 15:55:11,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-28 17:55:30] 2024-04-28 15:55:11,821 | INFO     | did not find any defunct processes belonging to 395078
[2024-04-28 17:55:30] 2024-04-28 15:55:11,838 | INFO     | did not find any defunct processes belonging to 395078
[2024-04-28 17:55:30] 2024-04-28 15:55:11,839 | INFO     | ready for new job
[2024-04-28 17:55:30] 2024-04-28 15:55:11,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-28 17:55:30] 2024-04-28 15:55:11,841 | INFO     | *************************************
[2024-04-28 17:55:30] 2024-04-28 15:55:11,841 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-28 17:55:30] 2024-04-28 15:55:11,841 | INFO     | *************************************
[2024-04-28 17:55:30] 2024-04-28 15:55:11,842 | INFO     | 
[2024-04-28 17:55:30] 2024-04-28 15:55:11,849 | INFO     | architecture information:
[2024-04-28 17:55:30] 2024-04-28 15:55:11,849 | INFO     | executing command: cat /etc/os-release
[2024-04-28 17:55:30] 2024-04-28 15:55:11,869 | INFO     | cat /etc/os-release:
[2024-04-28 17:55:30] NAME="CentOS Linux"
[2024-04-28 17:55:30] VERSION="7 (Core)"
[2024-04-28 17:55:30] ID="centos"
[2024-04-28 17:55:30] ID_LIKE="rhel fedora"
[2024-04-28 17:55:30] VERSION_ID="7"
[2024-04-28 17:55:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-28 17:55:30] ANSI_COLOR="0;31"
[2024-04-28 17:55:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-28 17:55:30] HOME_URL="https://www.centos.org/"
[2024-04-28 17:55:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-28 17:55:30] 
[2024-04-28 17:55:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-28 17:55:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-28 17:55:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-28 17:55:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-28 17:55:30] 
[2024-04-28 17:55:30] 2024-04-28 15:55:11,869 | INFO     | *************************************
[2024-04-28 17:55:30] 2024-04-28 15:55:12,372 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2024-04-28 17:55:30] 2024-04-28 15:55:12,400 | INFO     | sufficient remaining disk space (3134377164800 B)
[2024-04-28 17:55:30] 2024-04-28 15:55:12,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-28 17:55:30] 2024-04-28 15:55:12,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-28 17:55:30] 2024-04-28 15:55:12,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-28 17:55:30] 2024-04-28 15:55:12,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-28 17:55:30] 2024-04-28 15:55:12,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-28 17:55:30] 2024-04-28 15:55:12,402 | INFO     | aborting loop
[2024-04-28 17:55:30] 2024-04-28 15:55:12,537 | INFO     | all payload control threads have been joined
[2024-04-28 17:55:30] 2024-04-28 15:55:12,807 | INFO     | found 0 job(s) in 20 queues
[2024-04-28 17:55:30] 2024-04-28 15:55:12,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-28 17:55:30] 2024-04-28 15:55:12,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-28 17:55:30] 2024-04-28 15:55:12,834 | INFO     | all data control threads have been joined
[2024-04-28 17:55:30] 2024-04-28 15:55:13,406 | INFO     | [job] retrieve thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:13,408 | INFO     | [job] job monitor thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:13,542 | INFO     | [payload] control thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:13,839 | INFO     | [data] control thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:13,890 | INFO     | [job] create_data_payload thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:13,963 | INFO     | [payload] failed_post thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:14,035 | INFO     | all job control threads have been joined
[2024-04-28 17:55:30] 2024-04-28 15:55:14,270 | INFO     | [data] copytool_in thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:14,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-28 17:55:30] 2024-04-28 15:55:14,407 | INFO     | [data] copytool_out thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:14,485 | INFO     | [payload] validate_pre thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:14,522 | INFO     | [payload] validate_post thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:14,738 | INFO     | [payload] execute_payloads thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:14,752 | INFO     | [job] validate thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:15,040 | INFO     | [job] control thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:15,375 | INFO     | [job] queue monitor thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:16,408 | INFO     | [data] queue_monitor thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:22,560 | INFO     | job.realtimelogging is not enabled
[2024-04-28 17:55:30] 2024-04-28 15:55:23,565 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-28 17:55:30] 2024-04-28 15:55:24,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47198301111360)>', '<ExcThread(monitor, started 47198878312192)>']
[2024-04-28 17:55:30] 2024-04-28 15:55:24,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-28 17:55:30] 2024-04-28 15:55:24,868 | INFO     | [monitor] control thread has ended
[2024-04-28 17:55:30] 2024-04-28 15:55:29,728 | INFO     | all workflow threads have been joined
[2024-04-28 17:55:30] 2024-04-28 15:55:29,728 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-28 17:55:30] 2024-04-28 15:55:29,728 | INFO     | traces error code: 0
[2024-04-28 17:55:30] 2024-04-28 15:55:29,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-28 17:55:30] 2024-04-28 15:55:29,840 [wrapper] ==== pilot stdout END ====
[2024-04-28 17:55:30] 2024-04-28 15:55:29,842 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-28 17:55:30] 2024-04-28 15:55:29,844 [wrapper] pilotpid: 385126
[2024-04-28 17:55:30] 2024-04-28 15:55:29,846 [wrapper] Pilot exit status: 0
[2024-04-28 17:55:30] 2024-04-28 15:55:29,859 [wrapper] pandaids: 6182292114
[2024-04-28 17:55:30] 2024-04-28 15:55:29,956 [wrapper] cleanup: SIGTERM to supervisor_pilot 1695838 385127
[2024-04-28 17:55:30] 2024-04-28 15:55:29,969 [wrapper] Test setup, not cleaning
[2024-04-28 17:55:30] 2024-04-28 15:55:29,971 [wrapper] ==== wrapper stdout END ====
[2024-04-28 17:55:30] 2024-04-28 15:55:29,973 [wrapper] ==== wrapper stderr END ====
[2024-04-28 17:55:30] 2024-04-28 15:55:29,976 [wrapper] apfmon messages muted
[2024-04-28 17:55:30]  *** Error codes and diagnostics ***
[2024-04-28 17:55:30]     "exeErrorCode": 0,
[2024-04-28 17:55:30]     "exeErrorDiag": "",
[2024-04-28 17:55:30]     "pilotErrorCode": 0,
[2024-04-28 17:55:30]     "pilotErrorDiag": "",
[2024-04-28 17:55:30]  *** Listing of results directory ***
[2024-04-28 17:55:30] total 724720
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc    462745 Apr 21 12:37 pilot3.tar.gz
[2024-04-28 17:55:30] -rwx------ 1 boinc boinc     32211 Apr 21 12:43 runpilot2-wrapper.sh
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc      6720 Apr 21 12:43 queuedata.json
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc       100 Apr 28 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-28 17:55:30] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 14:41 run_atlas
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc       105 Apr 28 14:41 job.xml
[2024-04-28 17:55:30] -rw-r--r-- 2 boinc boinc 523221393 Apr 28 14:41 EVNT.38203149._000130.pool.root.1
[2024-04-28 17:55:30] -rw-r--r-- 2 boinc boinc     17537 Apr 28 14:41 start_atlas.sh
[2024-04-28 17:55:30] drwxrwx--x 2 boinc boinc      4096 Apr 28 14:41 shared
[2024-04-28 17:55:30] -rw-r--r-- 2 boinc boinc    474791 Apr 28 14:41 input.tar.gz
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc      6644 Apr 28 14:41 init_data.xml
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc         0 Apr 28 14:41 boinc_lockfile
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc      2555 Apr 28 14:41 pandaJob.out
[2024-04-28 17:55:30] -rw------- 1 boinc boinc       424 Apr 28 14:41 setup.sh.local
[2024-04-28 17:55:30] -rw------- 1 boinc boinc    997154 Apr 28 14:41 agis_schedconf.cvmfs.json
[2024-04-28 17:55:30] -rw------- 1 boinc boinc   1315307 Apr 28 14:41 cric_ddmendpoints.json
[2024-04-28 17:55:30] drwx------ 4 boinc boinc      4096 Apr 28 14:41 pilot3
[2024-04-28 17:55:30] -rw------- 1 boinc boinc 212630517 Apr 28 17:54 HITS.38203151._008221.pool.root.1
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc       531 Apr 28 17:54 boinc_task_state.xml
[2024-04-28 17:55:30] -rw------- 1 boinc boinc        95 Apr 28 17:54 pilot_heartbeat.json
[2024-04-28 17:55:30] -rw------- 1 boinc boinc      1043 Apr 28 17:54 memory_monitor_summary.json
[2024-04-28 17:55:30] -rw------- 1 boinc boinc         0 Apr 28 17:55 agis_ddmendpoints.agis.ALL.json
[2024-04-28 17:55:30] -rw------- 1 boinc boinc    300604 Apr 28 17:55 log.38203151._008221.job.log.tgz.1
[2024-04-28 17:55:30] -rw------- 1 boinc boinc      7693 Apr 28 17:55 heartbeat.json
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc      8192 Apr 28 17:55 boinc_mmap_file
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc        28 Apr 28 17:55 wrapper_checkpoint.txt
[2024-04-28 17:55:30] -rw------- 1 boinc boinc      4294 Apr 28 17:55 pilotlog.txt
[2024-04-28 17:55:30] -rw------- 1 boinc boinc   1087067 Apr 28 17:55 log.38203151._008221.job.log.1
[2024-04-28 17:55:30] -rw------- 1 boinc boinc       357 Apr 28 17:55 output.list
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc       620 Apr 28 17:55 runtime_log
[2024-04-28 17:55:30] -rw------- 1 boinc boinc   1402880 Apr 28 17:55 result.tar.gz
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc     11410 Apr 28 17:55 runtime_log.err
[2024-04-28 17:55:30] -rw------- 1 boinc boinc       656 Apr 28 17:55 lkFLDmZqjI5n9Rq4apoT9bVoABFKDmABFKDmtztZDm7OKKDmw7J3Rm.diag
[2024-04-28 17:55:30] -rw-r--r-- 1 boinc boinc     21127 Apr 28 17:55 stderr.txt
[2024-04-28 17:55:30] HITS file was successfully produced:
[2024-04-28 17:55:30] -rw------- 1 boinc boinc 212630517 Apr 28 17:54 shared/HITS.pool.root.1
[2024-04-28 17:55:30]  *** Contents of shared directory: ***
[2024-04-28 17:55:30] total 720472
[2024-04-28 17:55:30] -rw-r--r-- 2 boinc boinc 523221393 Apr 28 14:41 ATLAS.root_0
[2024-04-28 17:55:30] -rw-r--r-- 2 boinc boinc     17537 Apr 28 14:41 start_atlas.sh
[2024-04-28 17:55:30] -rw-r--r-- 2 boinc boinc    474791 Apr 28 14:41 input.tar.gz
[2024-04-28 17:55:30] -rw------- 1 boinc boinc 212630517 Apr 28 17:54 HITS.pool.root.1
[2024-04-28 17:55:30] -rw------- 1 boinc boinc   1402880 Apr 28 17:55 result.tar.gz
17:55:32 (380448): run_atlas exited; CPU time 43137.096994
17:55:32 (380448): called boinc_finish(0)

</stderr_txt>
]]>

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