Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:04:32 (779136): wrapper (7.7.26015): starting
04:04:32 (779136): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 04:04:32] Arguments: --nthreads 4
[2024-04-26 04:04:32] Threads: 4
[2024-04-26 04:04:32] Checking for CVMFS
[2024-04-26 04:04:32] No cvmfs_config command found, will try listing directly
[2024-04-26 04:04:32] CVMFS is ok
[2024-04-26 04:04:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 04:04:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 04:04:32] Further information can be found at the LHC@home message board.
[2024-04-26 04:04:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 04:04:32] Checking for apptainer binary...
[2024-04-26 04:04:32] which: no apptainer in ((null))
[2024-04-26 04:04:32] apptainer is not installed, using version from CVMFS
[2024-04-26 04:04:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 04:04:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-04-26 04:04:33] apptainer works
[2024-04-26 04:04:33] Set ATHENA_PROC_NUMBER=4
[2024-04-26 04:04:33] Set ATHENA_CORE_NUMBER=4
[2024-04-26 04:04:33] Starting ATLAS job with PandaID=6182246960
[2024-04-26 04:04:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 07:23:40]  *** The last 200 lines of the pilot log: ***
[2024-04-26 07:23:40]  filesize=324535
[2024-04-26 07:23:40]  filetype=log
[2024-04-26 07:23:40]  guid=2a4dc313-3336-4853-8a04-aada0db67160
[2024-04-26 07:23:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 07:23:40]  is_tar=False
[2024-04-26 07:23:40]  lfn=log.38204263._000849.job.log.tgz.1
[2024-04-26 07:23:40]  mtime=0
[2024-04-26 07:23:40]  protocol_id=None
[2024-04-26 07:23:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 07:23:40]  replicas=None
[2024-04-26 07:23:40]  scope=mc23_13p6TeV
[2024-04-26 07:23:40]  status=None
[2024-04-26 07:23:40]  status_code=0
[2024-04-26 07:23:40]  storage_token=
[2024-04-26 07:23:40]  surl=/scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6182246960/log.38204263._000849.job.log.tgz.1
[2024-04-26 07:23:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/b1/log.38204263._000849.job.log.tgz.1
[2024-04-26 07:23:40]  workdir=None
[2024-04-26 07:23:40] ]
[2024-04-26 07:23:40] 2024-04-26 05:23:13,268 | INFO     | transferring file log.38204263._000849.job.log.tgz.1 from /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6182246960/log.38204263._000849.job.log.tgz.1 to /scratch/b
[2024-04-26 07:23:40] 2024-04-26 05:23:13,269 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6182246960/log.38204263._000849.job.log.tgz.1 /scratch/boinc/var/slot28/slots/0/lo
[2024-04-26 07:23:40] 2024-04-26 05:23:13,283 | INFO     | adding to output.list: log.38204263._000849.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/b1/log.38204263._000849.job.log.tg
[2024-04-26 07:23:40] 2024-04-26 05:23:13,284 | INFO     | summary of transferred files:
[2024-04-26 07:23:40] 2024-04-26 05:23:13,284 | INFO     |  -- lfn=log.38204263._000849.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 07:23:40] 2024-04-26 05:23:13,284 | INFO     | stage-out finished correctly
[2024-04-26 07:23:40] 2024-04-26 05:23:13,350 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 07:23:40] 2024-04-26 05:23:14,567 | INFO     | job 6182246960 has state=finished
[2024-04-26 07:23:40] 2024-04-26 05:23:14,568 | INFO     | preparing for final server update for job 6182246960 in state='finished'
[2024-04-26 07:23:40] 2024-04-26 05:23:14,568 | INFO     | this job has now completed (state=finished)
[2024-04-26 07:23:40] 2024-04-26 05:23:14,568 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 07:23:40] 2024-04-26 05:23:14,569 | INFO     | job 6182246960 has finished - writing final server update
[2024-04-26 07:23:40] 2024-04-26 05:23:14,569 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1423055/.job.ad'
[2024-04-26 07:23:40] 2024-04-26 05:23:14,569 | INFO     | total number of processed events: 400 (read)
[2024-04-26 07:23:40] 2024-04-26 05:23:14,573 | INFO     | executing command: lscpu
[2024-04-26 07:23:40] 2024-04-26 05:23:14,600 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-26 07:23:40] 2024-04-26 05:23:14,601 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 07:23:40] 2024-04-26 05:23:14,625 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 07:23:40] 2024-04-26 05:23:15,265 | INFO     | 11914s have passed since pilot start
[2024-04-26 07:23:40] 2024-04-26 05:23:15,458 | INFO     | monitor loop #927: job 0:6182246960 is in state 'finished'
[2024-04-26 07:23:40] 2024-04-26 05:23:15,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 07:23:40] 2024-04-26 05:23:17,961 | INFO     | monitor loop #928: job 0:6182246960 is in state 'finished'
[2024-04-26 07:23:40] 2024-04-26 05:23:17,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,440 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 07:23:40] 2024-04-26 05:23:19,440 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6182246960/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,441 | INFO     | extracted standard info from prmon json
[2024-04-26 07:23:40] 2024-04-26 05:23:19,441 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 07:23:40] 2024-04-26 05:23:19,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 07:23:40] 2024-04-26 05:23:19,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 07:23:40] 2024-04-26 05:23:19,446 | INFO     | fitting pss+swap vs Time
[2024-04-26 07:23:40] 2024-04-26 05:23:19,448 | INFO     | current chi2=4.254750184638066 (change=-0.004403629304226206 %)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,448 | INFO     | right removable region: 189
[2024-04-26 07:23:40] 2024-04-26 05:23:19,449 | INFO     | current chi2=1.7085594574143537 (change=59.84171521495223 %)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,450 | INFO     | current chi2=0.10372524852899877 (change=93.92908171390351 %)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,451 | INFO     | current chi2=0.0013640455648928672 (change=98.6849435559448 %)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,451 | INFO     | current chi2=0.0013044197170755509 (change=4.37125044440868 %)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,451 | INFO     | left removable region: 40
[2024-04-26 07:23:40] 2024-04-26 05:23:19,452 | INFO     | current memory leak: -0.35 B/s (using 149 data points, chi2=0.00)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | ..............................
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | . Timing measurements:
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | . get job = 0 s
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | . initial setup = 1 s
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | . payload setup = 4 s
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | . stage-in = 0 s
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | . payload execution = 11887 s
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | . stage-out = 0 s
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | . log creation = 0 s
[2024-04-26 07:23:40] 2024-04-26 05:23:19,453 | INFO     | ..............................
[2024-04-26 07:23:40] 2024-04-26 05:23:19,887 | INFO     | 
[2024-04-26 07:23:40] 2024-04-26 05:23:19,887 | INFO     | job summary report
[2024-04-26 07:23:40] 2024-04-26 05:23:19,887 | INFO     | --------------------------------------------------
[2024-04-26 07:23:40] 2024-04-26 05:23:19,887 | INFO     | PanDA job id: 6182246960
[2024-04-26 07:23:40] 2024-04-26 05:23:19,888 | INFO     | task id: 38204263
[2024-04-26 07:23:40] 2024-04-26 05:23:19,888 | INFO     | errors: (none)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,888 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 07:23:40] 2024-04-26 05:23:19,888 | INFO     | pilot state: finished 
[2024-04-26 07:23:40] 2024-04-26 05:23:19,888 | INFO     | transexitcode: 0
[2024-04-26 07:23:40] 2024-04-26 05:23:19,888 | INFO     | exeerrorcode: 0
[2024-04-26 07:23:40] 2024-04-26 05:23:19,888 | INFO     | exeerrordiag: 
[2024-04-26 07:23:40] 2024-04-26 05:23:19,888 | INFO     | exitcode: 0
[2024-04-26 07:23:40] 2024-04-26 05:23:19,889 | INFO     | exitmsg: OK
[2024-04-26 07:23:40] 2024-04-26 05:23:19,889 | INFO     | cpuconsumptiontime: 44768 s
[2024-04-26 07:23:40] 2024-04-26 05:23:19,889 | INFO     | nevents: 400
[2024-04-26 07:23:40] 2024-04-26 05:23:19,889 | INFO     | neventsw: 0
[2024-04-26 07:23:40] 2024-04-26 05:23:19,889 | INFO     | pid: 792315
[2024-04-26 07:23:40] 2024-04-26 05:23:19,889 | INFO     | pgrp: 792315
[2024-04-26 07:23:40] 2024-04-26 05:23:19,889 | INFO     | corecount: 4
[2024-04-26 07:23:40] 2024-04-26 05:23:19,889 | INFO     | event service: False
[2024-04-26 07:23:40] 2024-04-26 05:23:19,890 | INFO     | sizes: {0: 2375661, 1: 2375661, 4: 2375895, 11: 2375923, 11895: 2405559, 11897: 2414725, 11903: 2414839}
[2024-04-26 07:23:40] 2024-04-26 05:23:19,890 | INFO     | --------------------------------------------------
[2024-04-26 07:23:40] 2024-04-26 05:23:19,890 | INFO     | 
[2024-04-26 07:23:40] 2024-04-26 05:23:19,890 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-04-26 07:23:40] 2024-04-26 05:23:19,911 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,911 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,912 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,912 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,912 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,912 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,913 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,913 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,914 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 07:23:40] 2024-04-26 05:23:19,914 | INFO     | job 6182246960 has completed (purged errors)
[2024-04-26 07:23:40] 2024-04-26 05:23:19,914 | INFO     | overall cleanup function is called
[2024-04-26 07:23:40] 2024-04-26 05:23:20,921 | INFO     | --- collectZombieJob: --- 10, [792315]
[2024-04-26 07:23:40] 2024-04-26 05:23:20,921 | INFO     | zombie collector waiting for pid 792315
[2024-04-26 07:23:40] 2024-04-26 05:23:20,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 07:23:40] 2024-04-26 05:23:21,926 | INFO     | collected zombie processes
[2024-04-26 07:23:40] 2024-04-26 05:23:21,926 | INFO     | will now attempt to kill all subprocesses of pid=792315
[2024-04-26 07:23:40] 2024-04-26 05:23:22,063 | INFO     | process IDs to be killed: [792315] (in reverse order)
[2024-04-26 07:23:40] 2024-04-26 05:23:22,134 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 07:23:40] 2024-04-26 05:23:22,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 07:23:40] 2024-04-26 05:23:22,140 | INFO     | did not find any defunct processes belonging to 792315
[2024-04-26 07:23:40] 2024-04-26 05:23:22,146 | INFO     | did not find any defunct processes belonging to 792315
[2024-04-26 07:23:40] 2024-04-26 05:23:22,146 | INFO     | ready for new job
[2024-04-26 07:23:40] 2024-04-26 05:23:22,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 07:23:40] 2024-04-26 05:23:22,148 | INFO     | *************************************
[2024-04-26 07:23:40] 2024-04-26 05:23:22,148 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 07:23:40] 2024-04-26 05:23:22,148 | INFO     | *************************************
[2024-04-26 07:23:40] 2024-04-26 05:23:22,148 | INFO     | 
[2024-04-26 07:23:40] 2024-04-26 05:23:22,151 | INFO     | architecture information:
[2024-04-26 07:23:40] 2024-04-26 05:23:22,151 | INFO     | executing command: cat /etc/os-release
[2024-04-26 07:23:40] 2024-04-26 05:23:22,164 | INFO     | cat /etc/os-release:
[2024-04-26 07:23:40] NAME="CentOS Linux"
[2024-04-26 07:23:40] VERSION="7 (Core)"
[2024-04-26 07:23:40] ID="centos"
[2024-04-26 07:23:40] ID_LIKE="rhel fedora"
[2024-04-26 07:23:40] VERSION_ID="7"
[2024-04-26 07:23:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 07:23:40] ANSI_COLOR="0;31"
[2024-04-26 07:23:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 07:23:40] HOME_URL="https://www.centos.org/"
[2024-04-26 07:23:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 07:23:40] 
[2024-04-26 07:23:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 07:23:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 07:23:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 07:23:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 07:23:40] 
[2024-04-26 07:23:40] 2024-04-26 05:23:22,165 | INFO     | *************************************
[2024-04-26 07:23:40] 2024-04-26 05:23:22,667 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-04-26 07:23:40] 2024-04-26 05:23:22,681 | INFO     | sufficient remaining disk space (1639822917632 B)
[2024-04-26 07:23:40] 2024-04-26 05:23:22,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 07:23:40] 2024-04-26 05:23:22,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 07:23:40] 2024-04-26 05:23:22,682 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 07:23:40] 2024-04-26 05:23:22,682 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 07:23:40] 2024-04-26 05:23:22,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 07:23:40] 2024-04-26 05:23:22,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 07:23:40] 2024-04-26 05:23:22,972 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-26 07:23:40] 2024-04-26 05:23:22,972 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-26 07:23:40] 2024-04-26 05:23:22,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 07:23:40] 2024-04-26 05:23:22,972 | INFO     | will abort loop
[2024-04-26 07:23:40] 2024-04-26 05:23:23,041 | INFO     | all payload control threads have been joined
[2024-04-26 07:23:40] 2024-04-26 05:23:23,360 | INFO     | all job control threads have been joined
[2024-04-26 07:23:40] 2024-04-26 05:23:23,620 | INFO     | all data control threads have been joined
[2024-04-26 07:23:40] 2024-04-26 05:23:23,686 | INFO     | [job] retrieve thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:23,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 07:23:40] 2024-04-26 05:23:23,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 07:23:40] 2024-04-26 05:23:23,974 | INFO     | [job] job monitor thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,006 | INFO     | [job] validate thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,045 | INFO     | [payload] control thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,281 | INFO     | [payload] validate_post thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,365 | INFO     | [job] control thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 07:23:40] 2024-04-26 05:23:24,625 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,626 | INFO     | [data] control thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,710 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,978 | INFO     | [data] copytool_in thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:24,990 | INFO     | [payload] failed_post thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:25,031 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:25,555 | INFO     | [job] queue monitor thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:25,865 | INFO     | [data] copytool_out thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:27,921 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:32,848 | INFO     | job.realtimelogging is not enabled
[2024-04-26 07:23:40] 2024-04-26 05:23:33,853 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 07:23:40] 2024-04-26 05:23:34,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47834866672704)>', '<ExcThread(monitor, started 47835042109184)>']
[2024-04-26 07:23:40] 2024-04-26 05:23:34,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 07:23:40] 2024-04-26 05:23:34,739 | INFO     | [monitor] control thread has ended
[2024-04-26 07:23:40] 2024-04-26 05:23:39,696 | INFO     | all workflow threads have been joined
[2024-04-26 07:23:40] 2024-04-26 05:23:39,696 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 07:23:40] 2024-04-26 05:23:39,697 | INFO     | traces error code: 0
[2024-04-26 07:23:40] 2024-04-26 05:23:39,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 07:23:40] 2024-04-26 05:23:39,775 [wrapper] ==== pilot stdout END ====
[2024-04-26 07:23:40] 2024-04-26 05:23:39,777 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 07:23:40] 2024-04-26 05:23:39,779 [wrapper] pilotpid: 784965
[2024-04-26 07:23:40] 2024-04-26 05:23:39,781 [wrapper] Pilot exit status: 0
[2024-04-26 07:23:40] 2024-04-26 05:23:39,788 [wrapper] pandaids: 6182246960
[2024-04-26 07:23:40] 2024-04-26 05:23:39,824 [wrapper] cleanup: SIGTERM to supervisor_pilot 1124094 784966
[2024-04-26 07:23:40] 2024-04-26 05:23:39,827 [wrapper] Test setup, not cleaning
[2024-04-26 07:23:40] 2024-04-26 05:23:39,829 [wrapper] ==== wrapper stdout END ====
[2024-04-26 07:23:40] 2024-04-26 05:23:39,831 [wrapper] ==== wrapper stderr END ====
[2024-04-26 07:23:40] 2024-04-26 05:23:39,834 [wrapper] apfmon messages muted
[2024-04-26 07:23:40]  *** Error codes and diagnostics ***
[2024-04-26 07:23:40]     "exeErrorCode": 0,
[2024-04-26 07:23:40]     "exeErrorDiag": "",
[2024-04-26 07:23:40]     "pilotErrorCode": 0,
[2024-04-26 07:23:40]     "pilotErrorDiag": "",
[2024-04-26 07:23:40]  *** Listing of results directory ***
[2024-04-26 07:23:40] total 708328
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc    462745 Apr 21 11:45 pilot3.tar.gz
[2024-04-26 07:23:40] -rwx------ 1 boinc boinc     32211 Apr 21 12:07 runpilot2-wrapper.sh
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc      6720 Apr 21 12:07 queuedata.json
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc       100 Apr 26 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 07:23:40] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 04:04 run_atlas
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc       105 Apr 26 04:04 job.xml
[2024-04-26 07:23:40] -rw-r--r-- 2 boinc boinc 517235584 Apr 26 04:04 EVNT.38204261._000034.pool.root.1
[2024-04-26 07:23:40] -rw-r--r-- 2 boinc boinc     17537 Apr 26 04:04 start_atlas.sh
[2024-04-26 07:23:40] drwxrwx--x 2 boinc boinc      4096 Apr 26 04:04 shared
[2024-04-26 07:23:40] -rw-r--r-- 2 boinc boinc    474815 Apr 26 04:04 input.tar.gz
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc      6457 Apr 26 04:04 init_data.xml
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc         0 Apr 26 04:04 boinc_lockfile
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc      2647 Apr 26 04:04 pandaJob.out
[2024-04-26 07:23:40] -rw------- 1 boinc boinc       424 Apr 26 04:04 setup.sh.local
[2024-04-26 07:23:40] -rw------- 1 boinc boinc    993582 Apr 26 04:04 agis_schedconf.cvmfs.json
[2024-04-26 07:23:40] -rw------- 1 boinc boinc   1315307 Apr 26 04:04 cric_ddmendpoints.json
[2024-04-26 07:23:40] drwx------ 4 boinc boinc      4096 Apr 26 04:04 pilot3
[2024-04-26 07:23:40] -rw------- 1 boinc boinc 201671373 Apr 26 07:22 HITS.38204263._000849.pool.root.1
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc       532 Apr 26 07:22 boinc_task_state.xml
[2024-04-26 07:23:40] -rw------- 1 boinc boinc      1046 Apr 26 07:23 memory_monitor_summary.json
[2024-04-26 07:23:40] -rw------- 1 boinc boinc         0 Apr 26 07:23 agis_ddmendpoints.agis.ALL.json
[2024-04-26 07:23:40] -rw------- 1 boinc boinc    324535 Apr 26 07:23 log.38204263._000849.job.log.tgz.1
[2024-04-26 07:23:40] -rw------- 1 boinc boinc        95 Apr 26 07:23 pilot_heartbeat.json
[2024-04-26 07:23:40] -rw------- 1 boinc boinc      7735 Apr 26 07:23 heartbeat.json
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc      8192 Apr 26 07:23 boinc_mmap_file
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc        28 Apr 26 07:23 wrapper_checkpoint.txt
[2024-04-26 07:23:40] -rw------- 1 boinc boinc      4603 Apr 26 07:23 pilotlog.txt
[2024-04-26 07:23:40] -rw------- 1 boinc boinc   1141436 Apr 26 07:23 log.38204263._000849.job.log.1
[2024-04-26 07:23:40] -rw------- 1 boinc boinc       357 Apr 26 07:23 output.list
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc       620 Apr 26 07:23 runtime_log
[2024-04-26 07:23:40] -rw------- 1 boinc boinc   1484800 Apr 26 07:23 result.tar.gz
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc     11410 Apr 26 07:23 runtime_log.err
[2024-04-26 07:23:40] -rw------- 1 boinc boinc       658 Apr 26 07:23 pQ0LDmUHjI5n9Rq4apoT9bVoABFKDmABFKDmtztZDmiNKKDmbC7eon.diag
[2024-04-26 07:23:40] -rw-r--r-- 1 boinc boinc     21243 Apr 26 07:23 stderr.txt
[2024-04-26 07:23:40] HITS file was successfully produced:
[2024-04-26 07:23:40] -rw------- 1 boinc boinc 201671373 Apr 26 07:22 shared/HITS.pool.root.1
[2024-04-26 07:23:40]  *** Contents of shared directory: ***
[2024-04-26 07:23:40] total 704008
[2024-04-26 07:23:40] -rw-r--r-- 2 boinc boinc 517235584 Apr 26 04:04 ATLAS.root_0
[2024-04-26 07:23:40] -rw-r--r-- 2 boinc boinc     17537 Apr 26 04:04 start_atlas.sh
[2024-04-26 07:23:40] -rw-r--r-- 2 boinc boinc    474815 Apr 26 04:04 input.tar.gz
[2024-04-26 07:23:40] -rw------- 1 boinc boinc 201671373 Apr 26 07:22 HITS.pool.root.1
[2024-04-26 07:23:40] -rw------- 1 boinc boinc   1484800 Apr 26 07:23 result.tar.gz
07:23:41 (779136): run_atlas exited; CPU time 44573.055182
07:23:41 (779136): called boinc_finish(0)

</stderr_txt>
]]>

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