Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:39:09 (1071131): wrapper (7.7.26015): starting
18:39:09 (1071131): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 18:39:09] Arguments: --nthreads 4
[2024-04-26 18:39:09] Threads: 4
[2024-04-26 18:39:09] Checking for CVMFS
[2024-04-26 18:39:09] No cvmfs_config command found, will try listing directly
[2024-04-26 18:39:09] CVMFS is ok
[2024-04-26 18:39:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 18:39:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 18:39:09] Further information can be found at the LHC@home message board.
[2024-04-26 18:39:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 18:39:09] Checking for apptainer binary...
[2024-04-26 18:39:09] which: no apptainer in ((null))
[2024-04-26 18:39:09] apptainer is not installed, using version from CVMFS
[2024-04-26 18:39:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 18:39:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-04-26 18:39:10] apptainer works
[2024-04-26 18:39:10] Set ATHENA_PROC_NUMBER=4
[2024-04-26 18:39:10] Set ATHENA_CORE_NUMBER=4
[2024-04-26 18:39:10] Starting ATLAS job with PandaID=6182246812
[2024-04-26 18:39:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 22:20:30]  *** The last 200 lines of the pilot log: ***
[2024-04-26 22:20:30]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-26 22:20:30]  direct_access_lan=False
[2024-04-26 22:20:30]  direct_access_wan=False
[2024-04-26 22:20:30]  domain=
[2024-04-26 22:20:30]  filesize=334808
[2024-04-26 22:20:30]  filetype=log
[2024-04-26 22:20:30]  guid=cdaf30a6-b0c0-429f-b432-229bef641a3a
[2024-04-26 22:20:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 22:20:30]  is_tar=False
[2024-04-26 22:20:30]  lfn=log.38204263._000798.job.log.tgz.1
[2024-04-26 22:20:30]  mtime=0
[2024-04-26 22:20:30]  protocol_id=None
[2024-04-26 22:20:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 22:20:30]  replicas=None
[2024-04-26 22:20:30]  scope=mc23_13p6TeV
[2024-04-26 22:20:30]  status=None
[2024-04-26 22:20:30]  status_code=0
[2024-04-26 22:20:30]  storage_token=
[2024-04-26 22:20:30]  surl=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182246812/log.38204263._000798.job.log.tgz.1
[2024-04-26 22:20:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/0d/log.38204263._000798.job.log.tgz.1
[2024-04-26 22:20:30]  workdir=None
[2024-04-26 22:20:30] ]
[2024-04-26 22:20:30] 2024-04-26 20:20:08,205 | INFO     | transferring file log.38204263._000798.job.log.tgz.1 from /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182246812/log.38204263._000798.job.log.tgz.1 to /scratch/b
[2024-04-26 22:20:30] 2024-04-26 20:20:08,205 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182246812/log.38204263._000798.job.log.tgz.1 /scratch/boinc/var/slot32/slots/0/lo
[2024-04-26 22:20:30] 2024-04-26 20:20:08,222 | INFO     | adding to output.list: log.38204263._000798.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/0d/log.38204263._000798.job.log.tg
[2024-04-26 22:20:30] 2024-04-26 20:20:08,223 | INFO     | summary of transferred files:
[2024-04-26 22:20:30] 2024-04-26 20:20:08,223 | INFO     |  -- lfn=log.38204263._000798.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 22:20:30] 2024-04-26 20:20:08,223 | INFO     | stage-out finished correctly
[2024-04-26 22:20:30] 2024-04-26 20:20:08,291 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 22:20:30] 2024-04-26 20:20:10,312 | INFO     | monitor loop #1022: job 0:6182246812 is in state 'finished'
[2024-04-26 22:20:30] 2024-04-26 20:20:10,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 22:20:30] 2024-04-26 20:20:11,261 | INFO     | job 6182246812 has state=finished
[2024-04-26 22:20:30] 2024-04-26 20:20:11,262 | INFO     | preparing for final server update for job 6182246812 in state='finished'
[2024-04-26 22:20:30] 2024-04-26 20:20:11,262 | INFO     | this job has now completed (state=finished)
[2024-04-26 22:20:30] 2024-04-26 20:20:11,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 22:20:30] 2024-04-26 20:20:11,263 | INFO     | job 6182246812 has finished - writing final server update
[2024-04-26 22:20:30] 2024-04-26 20:20:11,263 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4090184/.job.ad'
[2024-04-26 22:20:30] 2024-04-26 20:20:11,263 | INFO     | total number of processed events: 400 (read)
[2024-04-26 22:20:30] 2024-04-26 20:20:11,266 | INFO     | executing command: lscpu
[2024-04-26 22:20:30] 2024-04-26 20:20:11,307 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-26 22:20:30] 2024-04-26 20:20:11,307 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 22:20:30] 2024-04-26 20:20:11,343 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 22:20:30] 2024-04-26 20:20:12,815 | INFO     | monitor loop #1023: job 0:6182246812 is in state 'finished'
[2024-04-26 22:20:30] 2024-04-26 20:20:12,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,337 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 22:20:30] 2024-04-26 20:20:14,337 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182246812/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,338 | INFO     | extracted standard info from prmon json
[2024-04-26 22:20:30] 2024-04-26 20:20:14,338 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 22:20:30] 2024-04-26 20:20:14,338 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 22:20:30] 2024-04-26 20:20:14,338 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 22:20:30] 2024-04-26 20:20:14,341 | INFO     | fitting pss+swap vs Time
[2024-04-26 22:20:30] 2024-04-26 20:20:14,343 | INFO     | current chi2=3.551014869127361 (change=-0.062429381984332004 %)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,343 | INFO     | right removable region: 211
[2024-04-26 22:20:30] 2024-04-26 20:20:14,344 | INFO     | current chi2=1.2784089508761256 (change=63.9762968945904 %)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,345 | INFO     | current chi2=0.09195189076505465 (change=92.80731797895831 %)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,346 | INFO     | current chi2=0.04195294686214223 (change=54.37511234071762 %)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,347 | INFO     | current chi2=0.033660888099808904 (change=19.765140192847735 %)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,347 | INFO     | left removable region: 40
[2024-04-26 22:20:30] 2024-04-26 20:20:14,347 | INFO     | current memory leak: 1.87 B/s (using 171 data points, chi2=0.00)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | ..............................
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | . Timing measurements:
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | . get job = 0 s
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | . initial setup = 1 s
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | . payload setup = 5 s
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | . stage-in = 0 s
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | . payload execution = 13224 s
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | . stage-out = 0 s
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | . log creation = 0 s
[2024-04-26 22:20:30] 2024-04-26 20:20:14,348 | INFO     | ..............................
[2024-04-26 22:20:30] 2024-04-26 20:20:14,539 | INFO     | 
[2024-04-26 22:20:30] 2024-04-26 20:20:14,539 | INFO     | job summary report
[2024-04-26 22:20:30] 2024-04-26 20:20:14,540 | INFO     | --------------------------------------------------
[2024-04-26 22:20:30] 2024-04-26 20:20:14,540 | INFO     | PanDA job id: 6182246812
[2024-04-26 22:20:30] 2024-04-26 20:20:14,540 | INFO     | task id: 38204263
[2024-04-26 22:20:30] 2024-04-26 20:20:14,540 | INFO     | errors: (none)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,540 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 22:20:30] 2024-04-26 20:20:14,540 | INFO     | pilot state: finished 
[2024-04-26 22:20:30] 2024-04-26 20:20:14,540 | INFO     | transexitcode: 0
[2024-04-26 22:20:30] 2024-04-26 20:20:14,540 | INFO     | exeerrorcode: 0
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | exeerrordiag: 
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | exitcode: 0
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | exitmsg: OK
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | cpuconsumptiontime: 49913 s
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | nevents: 400
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | neventsw: 0
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | pid: 1082173
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | pgrp: 1082173
[2024-04-26 22:20:30] 2024-04-26 20:20:14,541 | INFO     | corecount: 4
[2024-04-26 22:20:30] 2024-04-26 20:20:14,542 | INFO     | event service: False
[2024-04-26 22:20:30] 2024-04-26 20:20:14,542 | INFO     | sizes: {0: 2375711, 4: 2375917, 11: 2375945, 13233: 2405980, 13234: 2415018, 13240: 2415132}
[2024-04-26 22:20:30] 2024-04-26 20:20:14,542 | INFO     | --------------------------------------------------
[2024-04-26 22:20:30] 2024-04-26 20:20:14,542 | INFO     | 
[2024-04-26 22:20:30] 2024-04-26 20:20:14,542 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-04-26 22:20:30] 2024-04-26 20:20:14,560 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,560 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,560 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,561 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,562 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,563 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 22:20:30] 2024-04-26 20:20:14,563 | INFO     | job 6182246812 has completed (purged errors)
[2024-04-26 22:20:30] 2024-04-26 20:20:14,563 | INFO     | overall cleanup function is called
[2024-04-26 22:20:30] 2024-04-26 20:20:15,571 | INFO     | --- collectZombieJob: --- 10, [1082173]
[2024-04-26 22:20:30] 2024-04-26 20:20:15,571 | INFO     | zombie collector waiting for pid 1082173
[2024-04-26 22:20:30] 2024-04-26 20:20:15,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 22:20:30] 2024-04-26 20:20:16,576 | INFO     | collected zombie processes
[2024-04-26 22:20:30] 2024-04-26 20:20:16,576 | INFO     | will now attempt to kill all subprocesses of pid=1082173
[2024-04-26 22:20:30] 2024-04-26 20:20:16,699 | INFO     | process IDs to be killed: [1082173] (in reverse order)
[2024-04-26 22:20:30] 2024-04-26 20:20:16,762 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 22:20:30] 2024-04-26 20:20:16,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 22:20:30] 2024-04-26 20:20:16,766 | INFO     | did not find any defunct processes belonging to 1082173
[2024-04-26 22:20:30] 2024-04-26 20:20:16,769 | INFO     | did not find any defunct processes belonging to 1082173
[2024-04-26 22:20:30] 2024-04-26 20:20:16,769 | INFO     | ready for new job
[2024-04-26 22:20:30] 2024-04-26 20:20:16,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 22:20:30] 2024-04-26 20:20:16,771 | INFO     | *************************************
[2024-04-26 22:20:30] 2024-04-26 20:20:16,771 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 22:20:30] 2024-04-26 20:20:16,771 | INFO     | *************************************
[2024-04-26 22:20:30] 2024-04-26 20:20:16,771 | INFO     | 
[2024-04-26 22:20:30] 2024-04-26 20:20:16,772 | INFO     | architecture information:
[2024-04-26 22:20:30] 2024-04-26 20:20:16,773 | INFO     | executing command: cat /etc/os-release
[2024-04-26 22:20:30] 2024-04-26 20:20:16,783 | INFO     | cat /etc/os-release:
[2024-04-26 22:20:30] NAME="CentOS Linux"
[2024-04-26 22:20:30] VERSION="7 (Core)"
[2024-04-26 22:20:30] ID="centos"
[2024-04-26 22:20:30] ID_LIKE="rhel fedora"
[2024-04-26 22:20:30] VERSION_ID="7"
[2024-04-26 22:20:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 22:20:30] ANSI_COLOR="0;31"
[2024-04-26 22:20:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 22:20:30] HOME_URL="https://www.centos.org/"
[2024-04-26 22:20:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 22:20:30] 
[2024-04-26 22:20:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 22:20:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 22:20:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 22:20:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 22:20:30] 
[2024-04-26 22:20:30] 2024-04-26 20:20:16,783 | INFO     | *************************************
[2024-04-26 22:20:30] 2024-04-26 20:20:17,285 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-04-26 22:20:30] 2024-04-26 20:20:17,303 | INFO     | sufficient remaining disk space (1639148683264 B)
[2024-04-26 22:20:30] 2024-04-26 20:20:17,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 22:20:30] 2024-04-26 20:20:17,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 22:20:30] 2024-04-26 20:20:17,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 22:20:30] 2024-04-26 20:20:17,304 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 22:20:30] 2024-04-26 20:20:17,305 | INFO     | aborting loop
[2024-04-26 22:20:30] 2024-04-26 20:20:17,305 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 22:20:30] 2024-04-26 20:20:17,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 22:20:30] 2024-04-26 20:20:17,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 22:20:30] 2024-04-26 20:20:17,775 | INFO     | all data control threads have been joined
[2024-04-26 22:20:30] 2024-04-26 20:20:17,870 | INFO     | all payload control threads have been joined
[2024-04-26 22:20:30] 2024-04-26 20:20:18,309 | INFO     | [job] retrieve thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:18,310 | INFO     | [job] job monitor thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:18,450 | INFO     | [job] validate thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:18,494 | INFO     | [payload] failed_post thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:18,555 | INFO     | [data] copytool_in thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:18,781 | INFO     | [data] control thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:18,800 | INFO     | all job control threads have been joined
[2024-04-26 22:20:30] 2024-04-26 20:20:18,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 22:20:30] 2024-04-26 20:20:18,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 22:20:30] 2024-04-26 20:20:18,876 | INFO     | [payload] control thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:18,931 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:19,039 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:19,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 22:20:30] 2024-04-26 20:20:19,467 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:19,523 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:19,697 | INFO     | [payload] validate_post thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:19,804 | INFO     | [job] control thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:20,412 | INFO     | [job] queue monitor thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:20,809 | INFO     | [data] copytool_out thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:22,870 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 22:20:30] 2024-04-26 20:20:24,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47222298526784)>', '<ExcThread(monitor, started 47222469760768)>']
[2024-04-26 22:20:30] 2024-04-26 20:20:25,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 22:20:30] 2024-04-26 20:20:25,347 | INFO     | [monitor] control thread has ended
[2024-04-26 22:20:30] 2024-04-26 20:20:29,697 | INFO     | all workflow threads have been joined
[2024-04-26 22:20:30] 2024-04-26 20:20:29,698 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 22:20:30] 2024-04-26 20:20:29,698 | INFO     | traces error code: 0
[2024-04-26 22:20:30] 2024-04-26 20:20:29,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 22:20:30] 2024-04-26 20:20:29,765 [wrapper] ==== pilot stdout END ====
[2024-04-26 22:20:30] 2024-04-26 20:20:29,768 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 22:20:30] 2024-04-26 20:20:29,770 [wrapper] pilotpid: 1075356
[2024-04-26 22:20:30] 2024-04-26 20:20:29,772 [wrapper] Pilot exit status: 0
[2024-04-26 22:20:30] 2024-04-26 20:20:29,780 [wrapper] pandaids: 6182246812
[2024-04-26 22:20:30] 2024-04-26 20:20:29,837 [wrapper] cleanup: SIGTERM to supervisor_pilot 1434043 1075357
[2024-04-26 22:20:30] 2024-04-26 20:20:29,839 [wrapper] Test setup, not cleaning
[2024-04-26 22:20:30] 2024-04-26 20:20:29,841 [wrapper] ==== wrapper stdout END ====
[2024-04-26 22:20:30] 2024-04-26 20:20:29,843 [wrapper] ==== wrapper stderr END ====
[2024-04-26 22:20:30] 2024-04-26 20:20:29,846 [wrapper] apfmon messages muted
[2024-04-26 22:20:30]  *** Error codes and diagnostics ***
[2024-04-26 22:20:30]     "exeErrorCode": 0,
[2024-04-26 22:20:30]     "exeErrorDiag": "",
[2024-04-26 22:20:30]     "pilotErrorCode": 0,
[2024-04-26 22:20:30]     "pilotErrorDiag": "",
[2024-04-26 22:20:30]  *** Listing of results directory ***
[2024-04-26 22:20:30] total 700060
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc    462745 Apr 21 11:45 pilot3.tar.gz
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc      6720 Apr 21 12:01 queuedata.json
[2024-04-26 22:20:30] -rwx------ 1 boinc boinc     32211 Apr 21 12:01 runpilot2-wrapper.sh
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc       100 Apr 26 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 22:20:30] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 18:39 run_atlas
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc       105 Apr 26 18:39 job.xml
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc      6457 Apr 26 18:39 init_data.xml
[2024-04-26 22:20:30] -rw-r--r-- 2 boinc boinc 520426457 Apr 26 18:39 EVNT.38204261._000032.pool.root.1
[2024-04-26 22:20:30] -rw-r--r-- 2 boinc boinc     17537 Apr 26 18:39 start_atlas.sh
[2024-04-26 22:20:30] drwxrwx--x 2 boinc boinc      4096 Apr 26 18:39 shared
[2024-04-26 22:20:30] -rw-r--r-- 2 boinc boinc    474820 Apr 26 18:39 input.tar.gz
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc         0 Apr 26 18:39 boinc_lockfile
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc      2647 Apr 26 18:39 pandaJob.out
[2024-04-26 22:20:30] -rw------- 1 boinc boinc       424 Apr 26 18:39 setup.sh.local
[2024-04-26 22:20:30] -rw------- 1 boinc boinc    997397 Apr 26 18:39 agis_schedconf.cvmfs.json
[2024-04-26 22:20:30] -rw------- 1 boinc boinc   1315307 Apr 26 18:39 cric_ddmendpoints.json
[2024-04-26 22:20:30] drwx------ 4 boinc boinc      4096 Apr 26 18:39 pilot3
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc       531 Apr 26 22:19 boinc_task_state.xml
[2024-04-26 22:20:30] -rw------- 1 boinc boinc 189767103 Apr 26 22:19 HITS.38204263._000798.pool.root.1
[2024-04-26 22:20:30] -rw------- 1 boinc boinc        95 Apr 26 22:20 pilot_heartbeat.json
[2024-04-26 22:20:30] -rw------- 1 boinc boinc      1051 Apr 26 22:20 memory_monitor_summary.json
[2024-04-26 22:20:30] -rw------- 1 boinc boinc         0 Apr 26 22:20 agis_ddmendpoints.agis.ALL.json
[2024-04-26 22:20:30] -rw------- 1 boinc boinc    334808 Apr 26 22:20 log.38204263._000798.job.log.tgz.1
[2024-04-26 22:20:30] -rw------- 1 boinc boinc      7737 Apr 26 22:20 heartbeat.json
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc      8192 Apr 26 22:20 boinc_mmap_file
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc        28 Apr 26 22:20 wrapper_checkpoint.txt
[2024-04-26 22:20:30] -rw------- 1 boinc boinc      4345 Apr 26 22:20 pilotlog.txt
[2024-04-26 22:20:30] -rw------- 1 boinc boinc   1257329 Apr 26 22:20 log.38204263._000798.job.log.1
[2024-04-26 22:20:30] -rw------- 1 boinc boinc       357 Apr 26 22:20 output.list
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc       620 Apr 26 22:20 runtime_log
[2024-04-26 22:20:30] -rw------- 1 boinc boinc   1607680 Apr 26 22:20 result.tar.gz
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc     11410 Apr 26 22:20 runtime_log.err
[2024-04-26 22:20:30] -rw------- 1 boinc boinc       659 Apr 26 22:20 GqALDmOCjI5n9Rq4apoT9bVoABFKDmABFKDmtztZDmRNKKDm62vbfn.diag
[2024-04-26 22:20:30] -rw-r--r-- 1 boinc boinc     21000 Apr 26 22:20 stderr.txt
[2024-04-26 22:20:30] HITS file was successfully produced:
[2024-04-26 22:20:30] -rw------- 1 boinc boinc 189767103 Apr 26 22:19 shared/HITS.pool.root.1
[2024-04-26 22:20:30]  *** Contents of shared directory: ***
[2024-04-26 22:20:30] total 695616
[2024-04-26 22:20:30] -rw-r--r-- 2 boinc boinc 520426457 Apr 26 18:39 ATLAS.root_0
[2024-04-26 22:20:30] -rw-r--r-- 2 boinc boinc     17537 Apr 26 18:39 start_atlas.sh
[2024-04-26 22:20:30] -rw-r--r-- 2 boinc boinc    474820 Apr 26 18:39 input.tar.gz
[2024-04-26 22:20:30] -rw------- 1 boinc boinc 189767103 Apr 26 22:19 HITS.pool.root.1
[2024-04-26 22:20:30] -rw------- 1 boinc boinc   1607680 Apr 26 22:20 result.tar.gz
22:20:31 (1071131): run_atlas exited; CPU time 49695.631961
22:20:31 (1071131): called boinc_finish(0)

</stderr_txt>
]]>

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