Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:04:47 (3555932): wrapper (7.7.26015): starting
12:04:47 (3555932): wrapper: running run_atlas (--nthreads 4)
[2024-04-28 12:04:47] Arguments: --nthreads 4
[2024-04-28 12:04:47] Threads: 4
[2024-04-28 12:04:47] Checking for CVMFS
[2024-04-28 12:04:47] No cvmfs_config command found, will try listing directly
[2024-04-28 12:04:47] CVMFS is ok
[2024-04-28 12:04:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-28 12:04:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-28 12:04:47] Further information can be found at the LHC@home message board.
[2024-04-28 12:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-28 12:04:47] Checking for apptainer binary...
[2024-04-28 12:04:47] which: no apptainer in ((null))
[2024-04-28 12:04:47] apptainer is not installed, using version from CVMFS
[2024-04-28 12:04:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-28 12:04:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-04-28 12:04:48] apptainer works
[2024-04-28 12:04:48] Set ATHENA_PROC_NUMBER=4
[2024-04-28 12:04:48] Set ATHENA_CORE_NUMBER=4
[2024-04-28 12:04:48] Starting ATLAS job with PandaID=6182135438
[2024-04-28 12:04:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-28 14:40:56]  *** The last 200 lines of the pilot log: ***
[2024-04-28 14:40:56]  direct_access_wan=False
[2024-04-28 14:40:56]  domain=
[2024-04-28 14:40:56]  filesize=273770
[2024-04-28 14:40:56]  filetype=log
[2024-04-28 14:40:56]  guid=09486fbc-48f8-4633-ae04-60a35c2f3bb5
[2024-04-28 14:40:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-28 14:40:56]  is_tar=False
[2024-04-28 14:40:56]  lfn=log.38207243._000005.job.log.tgz.1
[2024-04-28 14:40:56]  mtime=0
[2024-04-28 14:40:56]  protocol_id=None
[2024-04-28 14:40:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-28 14:40:56]  replicas=None
[2024-04-28 14:40:56]  scope=mc23_13p6TeV
[2024-04-28 14:40:56]  status=None
[2024-04-28 14:40:56]  status_code=0
[2024-04-28 14:40:56]  storage_token=
[2024-04-28 14:40:56]  surl=/scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6182135438/log.38207243._000005.job.log.tgz.1
[2024-04-28 14:40:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/81/log.38207243._000005.job.log.tgz.1
[2024-04-28 14:40:56]  workdir=None
[2024-04-28 14:40:56] ]
[2024-04-28 14:40:56] 2024-04-28 12:40:34,611 | INFO     | transferring file log.38207243._000005.job.log.tgz.1 from /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6182135438/log.38207243._000005.job.log.tgz.1 to /scratch/b
[2024-04-28 14:40:56] 2024-04-28 12:40:34,611 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6182135438/log.38207243._000005.job.log.tgz.1 /scratch/boinc/var/slot80/slots/0/lo
[2024-04-28 14:40:56] 2024-04-28 12:40:34,633 | INFO     | adding to output.list: log.38207243._000005.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/81/log.38207243._000005.job.log.tg
[2024-04-28 14:40:56] 2024-04-28 12:40:34,634 | INFO     | summary of transferred files:
[2024-04-28 14:40:56] 2024-04-28 12:40:34,634 | INFO     |  -- lfn=log.38207243._000005.job.log.tgz.1, status_code=0, status=transferred
[2024-04-28 14:40:56] 2024-04-28 12:40:34,634 | INFO     | stage-out finished correctly
[2024-04-28 14:40:56] 2024-04-28 12:40:34,740 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-28 14:40:56] 2024-04-28 12:40:36,329 | WARNING  | process 3569148 is no longer using CPU - aborting
[2024-04-28 14:40:56] 2024-04-28 12:40:36,330 | INFO     | will not send any job update
[2024-04-28 14:40:56] 2024-04-28 12:40:36,935 | INFO     | job 6182135438 has state=finished
[2024-04-28 14:40:56] 2024-04-28 12:40:36,935 | INFO     | preparing for final server update for job 6182135438 in state='finished'
[2024-04-28 14:40:56] 2024-04-28 12:40:36,936 | INFO     | this job has now completed (state=finished)
[2024-04-28 14:40:56] 2024-04-28 12:40:36,936 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-28 14:40:56] 2024-04-28 12:40:36,936 | INFO     | job 6182135438 has finished - writing final server update
[2024-04-28 14:40:56] 2024-04-28 12:40:36,936 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1664245/.job.ad'
[2024-04-28 14:40:56] 2024-04-28 12:40:36,936 | INFO     | total number of processed events: 400 (read)
[2024-04-28 14:40:56] 2024-04-28 12:40:36,943 | INFO     | executing command: lscpu
[2024-04-28 14:40:56] 2024-04-28 12:40:37,002 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-28 14:40:56] 2024-04-28 12:40:37,002 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-28 14:40:56] 2024-04-28 12:40:37,050 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-28 14:40:56] 2024-04-28 12:40:38,834 | INFO     | monitor loop #710: job 0:6182135438 is in state 'finished'
[2024-04-28 14:40:56] 2024-04-28 12:40:38,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,776 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-28 14:40:56] 2024-04-28 12:40:40,776 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6182135438/memory_monitor_summary.json (trf name=prmon)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,777 | INFO     | extracted standard info from prmon json
[2024-04-28 14:40:56] 2024-04-28 12:40:40,777 | INFO     | extracted standard memory fields from prmon json
[2024-04-28 14:40:56] 2024-04-28 12:40:40,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-28 14:40:56] 2024-04-28 12:40:40,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-28 14:40:56] 2024-04-28 12:40:40,780 | INFO     | fitting pss+swap vs Time
[2024-04-28 14:40:56] 2024-04-28 12:40:40,782 | INFO     | current chi2=4.361732402536536 (change=0.08495842683336007 %)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,783 | INFO     | right removable region: 147
[2024-04-28 14:40:56] 2024-04-28 12:40:40,784 | INFO     | current chi2=1.7264592571665023 (change=60.451666325551344 %)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,784 | INFO     | current chi2=0.06890585403789257 (change=96.00883404853803 %)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,785 | INFO     | current chi2=0.0008287679574633578 (change=98.7972459393543 %)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,786 | INFO     | current chi2=0.0005273791629456308 (change=36.365884057607566 %)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,787 | INFO     | current chi2=0.0004686346322554401 (change=11.138955578388448 %)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,787 | INFO     | left removable region: 50
[2024-04-28 14:40:56] 2024-04-28 12:40:40,788 | INFO     | current memory leak: 0.02 B/s (using 97 data points, chi2=0.00)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,788 | INFO     | ..............................
[2024-04-28 14:40:56] 2024-04-28 12:40:40,788 | INFO     | . Timing measurements:
[2024-04-28 14:40:56] 2024-04-28 12:40:40,788 | INFO     | . get job = 0 s
[2024-04-28 14:40:56] 2024-04-28 12:40:40,788 | INFO     | . initial setup = 1 s
[2024-04-28 14:40:56] 2024-04-28 12:40:40,788 | INFO     | . payload setup = 6 s
[2024-04-28 14:40:56] 2024-04-28 12:40:40,788 | INFO     | . stage-in = 0 s
[2024-04-28 14:40:56] 2024-04-28 12:40:40,788 | INFO     | . payload execution = 9311 s
[2024-04-28 14:40:56] 2024-04-28 12:40:40,789 | INFO     | . stage-out = 0 s
[2024-04-28 14:40:56] 2024-04-28 12:40:40,789 | INFO     | . log creation = 0 s
[2024-04-28 14:40:56] 2024-04-28 12:40:40,789 | INFO     | ..............................
[2024-04-28 14:40:56] 2024-04-28 12:40:40,878 | INFO     | 
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | job summary report
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | --------------------------------------------------
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | PanDA job id: 6182135438
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | task id: 38207243
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | errors: (none)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | pilot state: finished 
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | transexitcode: 0
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | exeerrorcode: 0
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | exeerrordiag: 
[2024-04-28 14:40:56] 2024-04-28 12:40:40,879 | INFO     | exitcode: 0
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | exitmsg: OK
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | cpuconsumptiontime: 34387 s
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | nevents: 400
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | neventsw: 0
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | pid: 3569148
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | pgrp: 3569148
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | corecount: 4
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | event service: False
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | sizes: {0: 2374131, 1: 2375678, 5: 2375884, 12: 2375940, 9322: 2404184, 9323: 2413350, 9329: 2413464}
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | --------------------------------------------------
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | 
[2024-04-28 14:40:56] 2024-04-28 12:40:40,880 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2024-04-28 14:40:56] 2024-04-28 12:40:40,899 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,899 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,899 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | job 6182135438 has completed (purged errors)
[2024-04-28 14:40:56] 2024-04-28 12:40:40,900 | INFO     | overall cleanup function is called
[2024-04-28 14:40:56] 2024-04-28 12:40:41,907 | INFO     | --- collectZombieJob: --- 10, [3569148]
[2024-04-28 14:40:56] 2024-04-28 12:40:41,907 | INFO     | zombie collector waiting for pid 3569148
[2024-04-28 14:40:56] 2024-04-28 12:40:41,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-28 14:40:56] 2024-04-28 12:40:42,912 | INFO     | collected zombie processes
[2024-04-28 14:40:56] 2024-04-28 12:40:42,912 | INFO     | will now attempt to kill all subprocesses of pid=3569148
[2024-04-28 14:40:56] 2024-04-28 12:40:43,126 | INFO     | process IDs to be killed: [3569148] (in reverse order)
[2024-04-28 14:40:56] 2024-04-28 12:40:43,277 | WARNING  | found no corresponding commands to process id(s)
[2024-04-28 14:40:56] 2024-04-28 12:40:43,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-28 14:40:56] 2024-04-28 12:40:43,290 | INFO     | did not find any defunct processes belonging to 3569148
[2024-04-28 14:40:56] 2024-04-28 12:40:43,299 | INFO     | did not find any defunct processes belonging to 3569148
[2024-04-28 14:40:56] 2024-04-28 12:40:43,299 | INFO     | ready for new job
[2024-04-28 14:40:56] 2024-04-28 12:40:43,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-28 14:40:56] 2024-04-28 12:40:43,301 | INFO     | *************************************
[2024-04-28 14:40:56] 2024-04-28 12:40:43,301 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-28 14:40:56] 2024-04-28 12:40:43,301 | INFO     | *************************************
[2024-04-28 14:40:56] 2024-04-28 12:40:43,301 | INFO     | 
[2024-04-28 14:40:56] 2024-04-28 12:40:43,305 | INFO     | architecture information:
[2024-04-28 14:40:56] 2024-04-28 12:40:43,306 | INFO     | executing command: cat /etc/os-release
[2024-04-28 14:40:56] 2024-04-28 12:40:43,325 | INFO     | cat /etc/os-release:
[2024-04-28 14:40:56] NAME="CentOS Linux"
[2024-04-28 14:40:56] VERSION="7 (Core)"
[2024-04-28 14:40:56] ID="centos"
[2024-04-28 14:40:56] ID_LIKE="rhel fedora"
[2024-04-28 14:40:56] VERSION_ID="7"
[2024-04-28 14:40:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-28 14:40:56] ANSI_COLOR="0;31"
[2024-04-28 14:40:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-28 14:40:56] HOME_URL="https://www.centos.org/"
[2024-04-28 14:40:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-28 14:40:56] 
[2024-04-28 14:40:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-28 14:40:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-28 14:40:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-28 14:40:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-28 14:40:56] 
[2024-04-28 14:40:56] 2024-04-28 12:40:43,326 | INFO     | *************************************
[2024-04-28 14:40:56] 2024-04-28 12:40:43,828 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2024-04-28 14:40:56] 2024-04-28 12:40:43,847 | INFO     | sufficient remaining disk space (3151112437760 B)
[2024-04-28 14:40:56] 2024-04-28 12:40:43,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-28 14:40:56] 2024-04-28 12:40:43,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-28 14:40:56] 2024-04-28 12:40:43,848 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-28 14:40:56] 2024-04-28 12:40:43,848 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-28 14:40:56] 2024-04-28 12:40:43,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-28 14:40:56] 2024-04-28 12:40:43,848 | INFO     | will abort loop
[2024-04-28 14:40:56] 2024-04-28 12:40:44,185 | INFO     | found 0 job(s) in 20 queues
[2024-04-28 14:40:56] 2024-04-28 12:40:44,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-28 14:40:56] 2024-04-28 12:40:44,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-28 14:40:56] 2024-04-28 12:40:44,436 | INFO     | all payload control threads have been joined
[2024-04-28 14:40:56] 2024-04-28 12:40:44,717 | INFO     | all job control threads have been joined
[2024-04-28 14:40:56] 2024-04-28 12:40:44,790 | INFO     | all data control threads have been joined
[2024-04-28 14:40:56] 2024-04-28 12:40:44,852 | INFO     | [job] retrieve thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:44,853 | INFO     | [job] job monitor thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:45,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-28 14:40:56] 2024-04-28 12:40:45,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-28 14:40:56] 2024-04-28 12:40:45,439 | INFO     | [payload] control thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:45,508 | INFO     | [payload] execute_payloads thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:45,720 | INFO     | [job] control thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:45,795 | INFO     | [data] control thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:45,860 | INFO     | [data] copytool_in thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:45,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-28 14:40:56] 2024-04-28 12:40:46,020 | INFO     | [job] validate thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:46,051 | INFO     | [job] create_data_payload thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:46,096 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:46,149 | INFO     | [payload] failed_post thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:46,243 | INFO     | [payload] validate_pre thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:46,284 | INFO     | [payload] validate_post thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:46,895 | INFO     | [job] queue monitor thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:47,260 | INFO     | [data] copytool_out thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:49,360 | INFO     | [data] queue_monitor thread has finished
[2024-04-28 14:40:56] 2024-04-28 12:40:50,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47070186337344)>', '<ExcThread(monitor, started 47070832498432)>']
[2024-04-28 14:40:56] 2024-04-28 12:40:51,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-28 14:40:56] 2024-04-28 12:40:51,216 | INFO     | [monitor] control thread has ended
[2024-04-28 14:40:56] 2024-04-28 12:40:55,760 | INFO     | all workflow threads have been joined
[2024-04-28 14:40:56] 2024-04-28 12:40:55,760 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-28 14:40:56] 2024-04-28 12:40:55,760 | INFO     | traces error code: 0
[2024-04-28 14:40:56] 2024-04-28 12:40:55,760 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-28 14:40:56] 2024-04-28 12:40:55,824 [wrapper] ==== pilot stdout END ====
[2024-04-28 14:40:56] 2024-04-28 12:40:55,827 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-28 14:40:56] 2024-04-28 12:40:55,828 [wrapper] pilotpid: 3560607
[2024-04-28 14:40:56] 2024-04-28 12:40:55,830 [wrapper] Pilot exit status: 0
[2024-04-28 14:40:56] 2024-04-28 12:40:55,839 [wrapper] pandaids: 6182135438
[2024-04-28 14:40:56] 2024-04-28 12:40:55,920 [wrapper] cleanup: SIGTERM to supervisor_pilot  334769 3560608
[2024-04-28 14:40:56] 2024-04-28 12:40:55,922 [wrapper] Test setup, not cleaning
[2024-04-28 14:40:56] 2024-04-28 12:40:55,923 [wrapper] ==== wrapper stdout END ====
[2024-04-28 14:40:56] 2024-04-28 12:40:55,925 [wrapper] ==== wrapper stderr END ====
[2024-04-28 14:40:56] 2024-04-28 12:40:55,929 [wrapper] apfmon messages muted
[2024-04-28 14:40:56]  *** Error codes and diagnostics ***
[2024-04-28 14:40:56]     "exeErrorCode": 0,
[2024-04-28 14:40:56]     "exeErrorDiag": "",
[2024-04-28 14:40:56]     "pilotErrorCode": 0,
[2024-04-28 14:40:56]     "pilotErrorDiag": "",
[2024-04-28 14:40:56]  *** Listing of results directory ***
[2024-04-28 14:40:56] total 700148
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc    462745 Apr 21 09:58 pilot3.tar.gz
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc      6720 Apr 21 10:19 queuedata.json
[2024-04-28 14:40:56] -rwx------ 1 boinc boinc     32211 Apr 21 10:19 runpilot2-wrapper.sh
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc       100 Apr 28 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-28 14:40:56] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 12:04 run_atlas
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc       105 Apr 28 12:04 job.xml
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc      6644 Apr 28 12:04 init_data.xml
[2024-04-28 14:40:56] -rw-r--r-- 2 boinc boinc 521516877 Apr 28 12:04 EVNT.38207241._000003.pool.root.1
[2024-04-28 14:40:56] -rw-r--r-- 2 boinc boinc     17537 Apr 28 12:04 start_atlas.sh
[2024-04-28 14:40:56] drwxrwx--x 2 boinc boinc      4096 Apr 28 12:04 shared
[2024-04-28 14:40:56] -rw-r--r-- 2 boinc boinc    474800 Apr 28 12:04 input.tar.gz
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc         0 Apr 28 12:04 boinc_lockfile
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc      2608 Apr 28 12:04 pandaJob.out
[2024-04-28 14:40:56] -rw------- 1 boinc boinc       424 Apr 28 12:04 setup.sh.local
[2024-04-28 14:40:56] -rw------- 1 boinc boinc    997146 Apr 28 12:04 agis_schedconf.cvmfs.json
[2024-04-28 14:40:56] -rw------- 1 boinc boinc         0 Apr 28 12:04 agis_ddmendpoints.agis.ALL.json
[2024-04-28 14:40:56] -rw------- 1 boinc boinc   1315307 Apr 28 12:04 cric_ddmendpoints.json
[2024-04-28 14:40:56] drwx------ 4 boinc boinc      4096 Apr 28 12:04 pilot3
[2024-04-28 14:40:56] -rw------- 1 boinc boinc 189627666 Apr 28 14:40 HITS.38207243._000005.pool.root.1
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc       531 Apr 28 14:40 boinc_task_state.xml
[2024-04-28 14:40:56] -rw------- 1 boinc boinc        95 Apr 28 14:40 pilot_heartbeat.json
[2024-04-28 14:40:56] -rw------- 1 boinc boinc      1039 Apr 28 14:40 memory_monitor_summary.json
[2024-04-28 14:40:56] -rw------- 1 boinc boinc    273770 Apr 28 14:40 log.38207243._000005.job.log.tgz.1
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc      8192 Apr 28 14:40 boinc_mmap_file
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc        27 Apr 28 14:40 wrapper_checkpoint.txt
[2024-04-28 14:40:56] -rw------- 1 boinc boinc      7676 Apr 28 14:40 heartbeat.json
[2024-04-28 14:40:56] -rw------- 1 boinc boinc      4408 Apr 28 14:40 pilotlog.txt
[2024-04-28 14:40:56] -rw------- 1 boinc boinc    887627 Apr 28 14:40 log.38207243._000005.job.log.1
[2024-04-28 14:40:56] -rw------- 1 boinc boinc       357 Apr 28 14:40 output.list
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc       620 Apr 28 14:40 runtime_log
[2024-04-28 14:40:56] -rw------- 1 boinc boinc   1177600 Apr 28 14:40 result.tar.gz
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc     11409 Apr 28 14:40 runtime_log.err
[2024-04-28 14:40:56] -rw------- 1 boinc boinc       656 Apr 28 14:40 ZB8LDmyahI5nsSi4apGgGQJmABFKDmABFKDmRLXKDmeNMKDm1GMxim.diag
[2024-04-28 14:40:56] -rw-r--r-- 1 boinc boinc     21057 Apr 28 14:40 stderr.txt
[2024-04-28 14:40:56] HITS file was successfully produced:
[2024-04-28 14:40:56] -rw------- 1 boinc boinc 189627666 Apr 28 14:40 shared/HITS.pool.root.1
[2024-04-28 14:40:56]  *** Contents of shared directory: ***
[2024-04-28 14:40:56] total 696124
[2024-04-28 14:40:56] -rw-r--r-- 2 boinc boinc 521516877 Apr 28 12:04 ATLAS.root_0
[2024-04-28 14:40:56] -rw-r--r-- 2 boinc boinc     17537 Apr 28 12:04 start_atlas.sh
[2024-04-28 14:40:56] -rw-r--r-- 2 boinc boinc    474800 Apr 28 12:04 input.tar.gz
[2024-04-28 14:40:56] -rw------- 1 boinc boinc 189627666 Apr 28 14:40 HITS.pool.root.1
[2024-04-28 14:40:56] -rw------- 1 boinc boinc   1177600 Apr 28 14:40 result.tar.gz
14:40:57 (3555932): run_atlas exited; CPU time 34174.463167
14:40:57 (3555932): called boinc_finish(0)

</stderr_txt>
]]>

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