Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:59:38 (1551326): wrapper (7.7.26015): starting
05:59:38 (1551326): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 05:59:38] Arguments: --nthreads 4
[2024-04-26 05:59:38] Threads: 4
[2024-04-26 05:59:38] Checking for CVMFS
[2024-04-26 05:59:38] No cvmfs_config command found, will try listing directly
[2024-04-26 05:59:38] CVMFS is ok
[2024-04-26 05:59:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 05:59:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 05:59:38] Further information can be found at the LHC@home message board.
[2024-04-26 05:59:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 05:59:38] Checking for apptainer binary...
[2024-04-26 05:59:38] which: no apptainer in ((null))
[2024-04-26 05:59:38] apptainer is not installed, using version from CVMFS
[2024-04-26 05:59:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 05:59:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-04-26 05:59:39] apptainer works
[2024-04-26 05:59:39] Set ATHENA_PROC_NUMBER=4
[2024-04-26 05:59:39] Set ATHENA_CORE_NUMBER=4
[2024-04-26 05:59:39] Starting ATLAS job with PandaID=6181972733
[2024-04-26 05:59:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 08:53:48]  *** The last 200 lines of the pilot log: ***
[2024-04-26 08:53:48]  ddm_activity=['write_lan', 'write_wan']
[2024-04-26 08:53:48]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-26 08:53:48]  direct_access_lan=False
[2024-04-26 08:53:48]  direct_access_wan=False
[2024-04-26 08:53:48]  domain=
[2024-04-26 08:53:48]  filesize=288700
[2024-04-26 08:53:48]  filetype=log
[2024-04-26 08:53:48]  guid=8f4c7a20-6d91-449a-8407-14d4b2435bf9
[2024-04-26 08:53:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 08:53:48]  is_tar=False
[2024-04-26 08:53:48]  lfn=log.38204263._000108.job.log.tgz.1
[2024-04-26 08:53:48]  mtime=0
[2024-04-26 08:53:48]  protocol_id=None
[2024-04-26 08:53:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 08:53:48]  replicas=None
[2024-04-26 08:53:48]  scope=mc23_13p6TeV
[2024-04-26 08:53:48]  status=None
[2024-04-26 08:53:48]  status_code=0
[2024-04-26 08:53:48]  storage_token=
[2024-04-26 08:53:48]  surl=/scratch/boinc/var/slot8/slots/1/PanDA_Pilot-6181972733/log.38204263._000108.job.log.tgz.1
[2024-04-26 08:53:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/05/log.38204263._000108.job.log.tgz.1
[2024-04-26 08:53:48]  workdir=None
[2024-04-26 08:53:48] ]
[2024-04-26 08:53:48] 2024-04-26 06:53:27,196 | INFO     | transferring file log.38204263._000108.job.log.tgz.1 from /scratch/boinc/var/slot8/slots/1/PanDA_Pilot-6181972733/log.38204263._000108.job.log.tgz.1 to /scratch/bo
[2024-04-26 08:53:48] 2024-04-26 06:53:27,196 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot8/slots/1/PanDA_Pilot-6181972733/log.38204263._000108.job.log.tgz.1 /scratch/boinc/var/slot8/slots/1/log.
[2024-04-26 08:53:48] 2024-04-26 06:53:27,215 | INFO     | adding to output.list: log.38204263._000108.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/05/log.38204263._000108.job.log.tg
[2024-04-26 08:53:48] 2024-04-26 06:53:27,216 | INFO     | summary of transferred files:
[2024-04-26 08:53:48] 2024-04-26 06:53:27,216 | INFO     |  -- lfn=log.38204263._000108.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 08:53:48] 2024-04-26 06:53:27,216 | INFO     | stage-out finished correctly
[2024-04-26 08:53:48] 2024-04-26 06:53:27,275 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 08:53:48] 2024-04-26 06:53:29,125 | INFO     | monitor loop #803: job 0:6181972733 is in state 'finished'
[2024-04-26 08:53:48] 2024-04-26 06:53:29,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 08:53:48] 2024-04-26 06:53:29,189 | INFO     | job 6181972733 has state=finished
[2024-04-26 08:53:48] 2024-04-26 06:53:29,189 | INFO     | preparing for final server update for job 6181972733 in state='finished'
[2024-04-26 08:53:48] 2024-04-26 06:53:29,190 | INFO     | this job has now completed (state=finished)
[2024-04-26 08:53:48] 2024-04-26 06:53:29,190 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 08:53:48] 2024-04-26 06:53:29,190 | INFO     | job 6181972733 has finished - writing final server update
[2024-04-26 08:53:48] 2024-04-26 06:53:29,190 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1382805/.job.ad'
[2024-04-26 08:53:48] 2024-04-26 06:53:29,190 | INFO     | total number of processed events: 400 (read)
[2024-04-26 08:53:48] 2024-04-26 06:53:29,194 | INFO     | executing command: lscpu
[2024-04-26 08:53:48] 2024-04-26 06:53:29,239 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 08:53:48] 2024-04-26 06:53:29,239 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 08:53:48] 2024-04-26 06:53:29,272 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 08:53:48] 2024-04-26 06:53:31,628 | INFO     | monitor loop #804: job 0:6181972733 is in state 'finished'
[2024-04-26 08:53:48] 2024-04-26 06:53:31,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,493 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 08:53:48] 2024-04-26 06:53:32,493 | INFO     | using path: /scratch/boinc/var/slot8/slots/1/PanDA_Pilot-6181972733/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,494 | INFO     | extracted standard info from prmon json
[2024-04-26 08:53:48] 2024-04-26 06:53:32,494 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 08:53:48] 2024-04-26 06:53:32,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 08:53:48] 2024-04-26 06:53:32,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 08:53:48] 2024-04-26 06:53:32,497 | INFO     | fitting pss+swap vs Time
[2024-04-26 08:53:48] 2024-04-26 06:53:32,498 | INFO     | current chi2=3.9026901385804966 (change=17.89274998869326 %)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,498 | INFO     | right removable region: 165
[2024-04-26 08:53:48] 2024-04-26 06:53:32,499 | INFO     | current chi2=2.332214566244755 (change=50.93340294233054 %)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,499 | INFO     | current chi2=0.9364854107228481 (change=59.845658102086986 %)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,500 | INFO     | current chi2=0.8953672909438603 (change=4.390684500599945 %)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,500 | INFO     | left removable region: 30
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | current memory leak: 2.60 B/s (using 135 data points, chi2=0.00)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | ..............................
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | . Timing measurements:
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | . get job = 0 s
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | . initial setup = 1 s
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | . payload setup = 4 s
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | . stage-in = 0 s
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | . payload execution = 10397 s
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | . stage-out = 0 s
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | . log creation = 0 s
[2024-04-26 08:53:48] 2024-04-26 06:53:32,501 | INFO     | ..............................
[2024-04-26 08:53:48] 2024-04-26 06:53:32,750 | INFO     | 
[2024-04-26 08:53:48] 2024-04-26 06:53:32,750 | INFO     | job summary report
[2024-04-26 08:53:48] 2024-04-26 06:53:32,750 | INFO     | --------------------------------------------------
[2024-04-26 08:53:48] 2024-04-26 06:53:32,750 | INFO     | PanDA job id: 6181972733
[2024-04-26 08:53:48] 2024-04-26 06:53:32,750 | INFO     | task id: 38204263
[2024-04-26 08:53:48] 2024-04-26 06:53:32,750 | INFO     | errors: (none)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,750 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | pilot state: finished 
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | transexitcode: 0
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | exeerrorcode: 0
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | exeerrordiag: 
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | exitcode: 0
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | exitmsg: OK
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | cpuconsumptiontime: 38794 s
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | nevents: 400
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | neventsw: 0
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | pid: 1562949
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | pgrp: 1562949
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | corecount: 4
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | event service: False
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | sizes: {0: 2375708, 4: 2375914, 11: 2375942, 10405: 2404802, 10406: 2413837, 10412: 2413951}
[2024-04-26 08:53:48] 2024-04-26 06:53:32,751 | INFO     | --------------------------------------------------
[2024-04-26 08:53:48] 2024-04-26 06:53:32,752 | INFO     | 
[2024-04-26 08:53:48] 2024-04-26 06:53:32,752 | INFO     | executing command: ls -lF /scratch/boinc/var/slot8/slots/1
[2024-04-26 08:53:48] 2024-04-26 06:53:32,775 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,776 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,776 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,776 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 08:53:48] 2024-04-26 06:53:32,777 | INFO     | job 6181972733 has completed (purged errors)
[2024-04-26 08:53:48] 2024-04-26 06:53:32,778 | INFO     | overall cleanup function is called
[2024-04-26 08:53:48] 2024-04-26 06:53:33,785 | INFO     | --- collectZombieJob: --- 10, [1562949]
[2024-04-26 08:53:48] 2024-04-26 06:53:33,785 | INFO     | zombie collector waiting for pid 1562949
[2024-04-26 08:53:48] 2024-04-26 06:53:33,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 08:53:48] 2024-04-26 06:53:34,790 | INFO     | collected zombie processes
[2024-04-26 08:53:48] 2024-04-26 06:53:34,790 | INFO     | will now attempt to kill all subprocesses of pid=1562949
[2024-04-26 08:53:48] 2024-04-26 06:53:34,935 | INFO     | process IDs to be killed: [1562949] (in reverse order)
[2024-04-26 08:53:48] 2024-04-26 06:53:35,022 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 08:53:48] 2024-04-26 06:53:35,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 08:53:48] 2024-04-26 06:53:35,029 | INFO     | did not find any defunct processes belonging to 1562949
[2024-04-26 08:53:48] 2024-04-26 06:53:35,035 | INFO     | did not find any defunct processes belonging to 1562949
[2024-04-26 08:53:48] 2024-04-26 06:53:35,035 | INFO     | ready for new job
[2024-04-26 08:53:48] 2024-04-26 06:53:35,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 08:53:48] 2024-04-26 06:53:35,036 | INFO     | *************************************
[2024-04-26 08:53:48] 2024-04-26 06:53:35,037 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 08:53:48] 2024-04-26 06:53:35,037 | INFO     | *************************************
[2024-04-26 08:53:48] 2024-04-26 06:53:35,037 | INFO     | 
[2024-04-26 08:53:48] 2024-04-26 06:53:35,039 | INFO     | architecture information:
[2024-04-26 08:53:48] 2024-04-26 06:53:35,040 | INFO     | executing command: cat /etc/os-release
[2024-04-26 08:53:48] 2024-04-26 06:53:35,057 | INFO     | cat /etc/os-release:
[2024-04-26 08:53:48] NAME="CentOS Linux"
[2024-04-26 08:53:48] VERSION="7 (Core)"
[2024-04-26 08:53:48] ID="centos"
[2024-04-26 08:53:48] ID_LIKE="rhel fedora"
[2024-04-26 08:53:48] VERSION_ID="7"
[2024-04-26 08:53:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 08:53:48] ANSI_COLOR="0;31"
[2024-04-26 08:53:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 08:53:48] HOME_URL="https://www.centos.org/"
[2024-04-26 08:53:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 08:53:48] 
[2024-04-26 08:53:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 08:53:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 08:53:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 08:53:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 08:53:48] 
[2024-04-26 08:53:48] 2024-04-26 06:53:35,057 | INFO     | *************************************
[2024-04-26 08:53:48] 2024-04-26 06:53:35,559 | INFO     | executing command: df -mP /scratch/boinc/var/slot8/slots/1
[2024-04-26 08:53:48] 2024-04-26 06:53:35,577 | INFO     | sufficient remaining disk space (620089049088 B)
[2024-04-26 08:53:48] 2024-04-26 06:53:35,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 08:53:48] 2024-04-26 06:53:35,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 08:53:48] 2024-04-26 06:53:35,578 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 08:53:48] 2024-04-26 06:53:35,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 08:53:48] 2024-04-26 06:53:35,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 08:53:48] 2024-04-26 06:53:35,579 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 08:53:48] 2024-04-26 06:53:35,579 | INFO     | aborting loop
[2024-04-26 08:53:48] 2024-04-26 06:53:35,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 08:53:48] 2024-04-26 06:53:35,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 08:53:48] 2024-04-26 06:53:35,699 | INFO     | all job control threads have been joined
[2024-04-26 08:53:48] 2024-04-26 06:53:36,222 | INFO     | all data control threads have been joined
[2024-04-26 08:53:48] 2024-04-26 06:53:36,474 | INFO     | all payload control threads have been joined
[2024-04-26 08:53:48] 2024-04-26 06:53:36,583 | INFO     | [job] retrieve thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:36,583 | INFO     | [job] job monitor thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:36,708 | INFO     | [job] control thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:36,809 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:36,857 | INFO     | [job] validate thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:36,956 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:37,227 | INFO     | [data] control thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:37,242 | INFO     | [payload] validate_post thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:37,462 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:37,479 | INFO     | [payload] control thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:37,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 08:53:48] 2024-04-26 06:53:37,584 | INFO     | [data] copytool_out thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:37,613 | INFO     | [data] copytool_in thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:37,662 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:37,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 08:53:48] 2024-04-26 06:53:38,036 | INFO     | [payload] failed_post thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:38,572 | INFO     | [job] queue monitor thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:41,838 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 08:53:48] 2024-04-26 06:53:42,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47754324907072)>', '<ExcThread(monitor, started 47754498242304)>']
[2024-04-26 08:53:48] 2024-04-26 06:53:42,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 08:53:48] 2024-04-26 06:53:42,610 | INFO     | [monitor] control thread has ended
[2024-04-26 08:53:48] 2024-04-26 06:53:47,430 | INFO     | all workflow threads have been joined
[2024-04-26 08:53:48] 2024-04-26 06:53:47,431 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 08:53:48] 2024-04-26 06:53:47,431 | INFO     | traces error code: 0
[2024-04-26 08:53:48] 2024-04-26 06:53:47,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 08:53:48] 2024-04-26 06:53:47,499 [wrapper] ==== pilot stdout END ====
[2024-04-26 08:53:48] 2024-04-26 06:53:47,501 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 08:53:48] 2024-04-26 06:53:47,503 [wrapper] pilotpid: 1555641
[2024-04-26 08:53:48] 2024-04-26 06:53:47,504 [wrapper] Pilot exit status: 0
[2024-04-26 08:53:48] 2024-04-26 06:53:47,511 [wrapper] pandaids: 6181972733
[2024-04-26 08:53:48] 2024-04-26 06:53:47,569 [wrapper] cleanup: SIGTERM to supervisor_pilot 2044335 1555642
[2024-04-26 08:53:48] 2024-04-26 06:53:47,571 [wrapper] Test setup, not cleaning
[2024-04-26 08:53:48] 2024-04-26 06:53:47,573 [wrapper] ==== wrapper stdout END ====
[2024-04-26 08:53:48] 2024-04-26 06:53:47,575 [wrapper] ==== wrapper stderr END ====
[2024-04-26 08:53:48] 2024-04-26 06:53:47,580 [wrapper] apfmon messages muted
[2024-04-26 08:53:48]  *** Error codes and diagnostics ***
[2024-04-26 08:53:48]     "exeErrorCode": 0,
[2024-04-26 08:53:48]     "exeErrorDiag": "",
[2024-04-26 08:53:48]     "pilotErrorCode": 0,
[2024-04-26 08:53:48]     "pilotErrorDiag": "",
[2024-04-26 08:53:48]  *** Listing of results directory ***
[2024-04-26 08:53:48] total 832156
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc    462745 Apr 21 07:13 pilot3.tar.gz
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc      6720 Apr 21 07:17 queuedata.json
[2024-04-26 08:53:48] -rwx------ 1 boinc boinc     32211 Apr 21 07:18 runpilot2-wrapper.sh
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc       100 Apr 25 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 08:53:48] -rwxr-xr-x 1 boinc boinc      7986 Apr 25 17:10 run_atlas
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc       105 Apr 25 17:10 job.xml
[2024-04-26 08:53:48] -rw------- 2 boinc boinc 134414336 Apr 25 17:17 copy_O7MvnX
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc      6660 Apr 26 05:59 init_data.xml
[2024-04-26 08:53:48] -rw-r--r-- 2 boinc boinc 519894916 Apr 26 05:59 EVNT.38204261._000009.pool.root.1
[2024-04-26 08:53:48] -rw-r--r-- 2 boinc boinc     17537 Apr 26 05:59 start_atlas.sh
[2024-04-26 08:53:48] drwxrwx--x 2 boinc boinc      4096 Apr 26 05:59 shared
[2024-04-26 08:53:48] -rw-r--r-- 2 boinc boinc    474816 Apr 26 05:59 input.tar.gz
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc         0 Apr 26 05:59 boinc_lockfile
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc      2646 Apr 26 05:59 pandaJob.out
[2024-04-26 08:53:48] -rw------- 1 boinc boinc       424 Apr 26 05:59 setup.sh.local
[2024-04-26 08:53:48] -rw------- 1 boinc boinc    993582 Apr 26 05:59 agis_schedconf.cvmfs.json
[2024-04-26 08:53:48] -rw------- 1 boinc boinc         0 Apr 26 05:59 agis_ddmendpoints.agis.ALL.json
[2024-04-26 08:53:48] -rw------- 1 boinc boinc   1315307 Apr 26 05:59 cric_ddmendpoints.json
[2024-04-26 08:53:48] drwx------ 4 boinc boinc      4096 Apr 26 05:59 pilot3
[2024-04-26 08:53:48] -rw------- 1 boinc boinc 191764153 Apr 26 08:52 HITS.38204263._000108.pool.root.1
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc       532 Apr 26 08:53 boinc_task_state.xml
[2024-04-26 08:53:48] -rw------- 1 boinc boinc        95 Apr 26 08:53 pilot_heartbeat.json
[2024-04-26 08:53:48] -rw------- 1 boinc boinc      1046 Apr 26 08:53 memory_monitor_summary.json
[2024-04-26 08:53:48] -rw------- 1 boinc boinc    288700 Apr 26 08:53 log.38204263._000108.job.log.tgz.1
[2024-04-26 08:53:48] -rw------- 1 boinc boinc      7725 Apr 26 08:53 heartbeat.json
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc      8192 Apr 26 08:53 boinc_mmap_file
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc        28 Apr 26 08:53 wrapper_checkpoint.txt
[2024-04-26 08:53:48] -rw------- 1 boinc boinc      4343 Apr 26 08:53 pilotlog.txt
[2024-04-26 08:53:48] -rw------- 1 boinc boinc    994351 Apr 26 08:53 log.38204263._000108.job.log.1
[2024-04-26 08:53:48] -rw------- 1 boinc boinc       357 Apr 26 08:53 output.list
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc       620 Apr 26 08:53 runtime_log
[2024-04-26 08:53:48] -rw------- 1 boinc boinc   1300480 Apr 26 08:53 result.tar.gz
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc     11391 Apr 26 08:53 runtime_log.err
[2024-04-26 08:53:48] -rw------- 1 boinc boinc       657 Apr 26 08:53 N6lMDmoleI5nsSi4apGgGQJmABFKDmABFKDmRLXKDmZ8LKDmCSAB8n.diag
[2024-04-26 08:53:48] -rw-r--r-- 1 boinc boinc     20927 Apr 26 08:53 stderr.txt
[2024-04-26 08:53:48] HITS file was successfully produced:
[2024-04-26 08:53:48] -rw------- 1 boinc boinc 191764153 Apr 26 08:52 shared/HITS.pool.root.1
[2024-04-26 08:53:48]  *** Contents of shared directory: ***
[2024-04-26 08:53:48] total 828016
[2024-04-26 08:53:48] -rw------- 2 boinc boinc 134414336 Apr 25 17:17 copy_O7MvnX
[2024-04-26 08:53:48] -rw-r--r-- 2 boinc boinc 519894916 Apr 26 05:59 ATLAS.root_0
[2024-04-26 08:53:48] -rw-r--r-- 2 boinc boinc     17537 Apr 26 05:59 start_atlas.sh
[2024-04-26 08:53:48] -rw-r--r-- 2 boinc boinc    474816 Apr 26 05:59 input.tar.gz
[2024-04-26 08:53:48] -rw------- 1 boinc boinc 191764153 Apr 26 08:52 HITS.pool.root.1
[2024-04-26 08:53:48] -rw------- 1 boinc boinc   1300480 Apr 26 08:53 result.tar.gz
08:53:50 (1551326): run_atlas exited; CPU time 38574.054590
08:53:50 (1551326): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN