Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:40:34 (1514797): wrapper (7.7.26015): starting
22:40:34 (1514797): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 22:40:34] Arguments: --nthreads 4
[2024-04-26 22:40:34] Threads: 4
[2024-04-26 22:40:34] Checking for CVMFS
[2024-04-26 22:40:34] No cvmfs_config command found, will try listing directly
[2024-04-26 22:40:34] CVMFS is ok
[2024-04-26 22:40:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 22:40:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 22:40:34] Further information can be found at the LHC@home message board.
[2024-04-26 22:40:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 22:40:34] Checking for apptainer binary...
[2024-04-26 22:40:34] which: no apptainer in ((null))
[2024-04-26 22:40:34] apptainer is not installed, using version from CVMFS
[2024-04-26 22:40:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 22:40:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-04-26 22:40:35] apptainer works
[2024-04-26 22:40:35] Set ATHENA_PROC_NUMBER=4
[2024-04-26 22:40:35] Set ATHENA_CORE_NUMBER=4
[2024-04-26 22:40:35] Starting ATLAS job with PandaID=6182105215
[2024-04-26 22:40:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 02:04:14]  *** The last 200 lines of the pilot log: ***
[2024-04-27 02:04:14]  filetype=log
[2024-04-27 02:04:14]  guid=6e994599-22ef-4fb5-9a03-d53fe93d7231
[2024-04-27 02:04:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 02:04:14]  is_tar=False
[2024-04-27 02:04:14]  lfn=log.38204359._003207.job.log.tgz.1
[2024-04-27 02:04:14]  mtime=0
[2024-04-27 02:04:14]  protocol_id=None
[2024-04-27 02:04:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 02:04:14]  replicas=None
[2024-04-27 02:04:14]  scope=mc23_13p6TeV
[2024-04-27 02:04:14]  status=None
[2024-04-27 02:04:14]  status_code=0
[2024-04-27 02:04:14]  storage_token=
[2024-04-27 02:04:14]  surl=/scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6182105215/log.38204359._003207.job.log.tgz.1
[2024-04-27 02:04:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/fd/log.38204359._003207.job.log.tgz.1
[2024-04-27 02:04:14]  workdir=None
[2024-04-27 02:04:14] ]
[2024-04-27 02:04:14] 2024-04-27 00:03:44,834 | INFO     | transferring file log.38204359._003207.job.log.tgz.1 from /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6182105215/log.38204359._003207.job.log.tgz.1 to /scratch/b
[2024-04-27 02:04:14] 2024-04-27 00:03:44,834 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6182105215/log.38204359._003207.job.log.tgz.1 /scratch/boinc/var/slot16/slots/1/lo
[2024-04-27 02:04:14] 2024-04-27 00:03:44,850 | INFO     | adding to output.list: log.38204359._003207.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/fd/log.38204359._003207.job.log.tg
[2024-04-27 02:04:14] 2024-04-27 00:03:44,851 | INFO     | summary of transferred files:
[2024-04-27 02:04:14] 2024-04-27 00:03:44,851 | INFO     |  -- lfn=log.38204359._003207.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 02:04:14] 2024-04-27 00:03:44,851 | INFO     | stage-out finished correctly
[2024-04-27 02:04:14] 2024-04-27 00:03:45,603 | WARNING  | process 1526026 is no longer using CPU - aborting
[2024-04-27 02:04:14] 2024-04-27 00:03:45,603 | INFO     | will not send any job update
[2024-04-27 02:04:14] 2024-04-27 00:03:48,105 | INFO     | monitor loop #943: job 0:6182105215 is in state 'finished'
[2024-04-27 02:04:14] 2024-04-27 00:03:48,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 02:04:14] 2024-04-27 00:03:48,208 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 02:04:14] 2024-04-27 00:03:48,366 | INFO     | job 6182105215 has state=finished
[2024-04-27 02:04:14] 2024-04-27 00:03:48,366 | INFO     | preparing for final server update for job 6182105215 in state='finished'
[2024-04-27 02:04:14] 2024-04-27 00:03:48,377 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /scratch/boinc/var/slot16/slots/1/PanDA_Pilot
[2024-04-27 02:04:14] 2024-04-27 00:03:49,781 | INFO     | this job has now completed (state=finished)
[2024-04-27 02:04:14] 2024-04-27 00:03:49,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 02:04:14] 2024-04-27 00:03:49,781 | INFO     | job 6182105215 has finished - writing final server update
[2024-04-27 02:04:14] 2024-04-27 00:03:49,781 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4087820/.job.ad'
[2024-04-27 02:04:14] 2024-04-27 00:03:49,782 | INFO     | total number of processed events: 400 (read)
[2024-04-27 02:04:14] 2024-04-27 00:03:49,785 | INFO     | executing command: lscpu
[2024-04-27 02:04:14] 2024-04-27 00:03:49,818 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-27 02:04:14] 2024-04-27 00:03:49,819 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 02:04:14] 2024-04-27 00:03:49,851 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 02:04:14] 2024-04-27 00:03:50,608 | INFO     | monitor loop #944: job 0:6182105215 is in state 'finished'
[2024-04-27 02:04:14] 2024-04-27 00:03:50,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,534 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 02:04:14] 2024-04-27 00:03:52,534 | INFO     | using path: /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6182105215/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,535 | INFO     | extracted standard info from prmon json
[2024-04-27 02:04:14] 2024-04-27 00:03:52,535 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 02:04:14] 2024-04-27 00:03:52,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 02:04:14] 2024-04-27 00:03:52,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 02:04:14] 2024-04-27 00:03:52,538 | INFO     | fitting pss+swap vs Time
[2024-04-27 02:04:14] 2024-04-27 00:03:52,540 | INFO     | current chi2=4.079118858055641 (change=16.092069080724855 %)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,540 | INFO     | right removable region: 194
[2024-04-27 02:04:14] 2024-04-27 00:03:52,541 | INFO     | current chi2=2.339411761646526 (change=51.87803853758191 %)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,542 | INFO     | current chi2=0.9035303652834425 (change=61.37788224816313 %)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,543 | INFO     | current chi2=0.829266376936523 (change=8.21931295287707 %)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,543 | INFO     | left removable region: 30
[2024-04-27 02:04:14] 2024-04-27 00:03:52,543 | INFO     | current memory leak: 1.90 B/s (using 164 data points, chi2=0.00)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | ..............................
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | . Timing measurements:
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | . get job = 0 s
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | . initial setup = 1 s
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | . payload setup = 4 s
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | . stage-in = 0 s
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | . payload execution = 12155 s
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | . stage-out = 0 s
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | . log creation = 0 s
[2024-04-27 02:04:14] 2024-04-27 00:03:52,544 | INFO     | ..............................
[2024-04-27 02:04:14] 2024-04-27 00:03:52,602 | INFO     | 
[2024-04-27 02:04:14] 2024-04-27 00:03:52,602 | INFO     | job summary report
[2024-04-27 02:04:14] 2024-04-27 00:03:52,602 | INFO     | --------------------------------------------------
[2024-04-27 02:04:14] 2024-04-27 00:03:52,602 | INFO     | PanDA job id: 6182105215
[2024-04-27 02:04:14] 2024-04-27 00:03:52,602 | INFO     | task id: 38204359
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | errors: (none)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | pilot state: finished 
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | transexitcode: 0
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | exeerrorcode: 0
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | exeerrordiag: 
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | exitcode: 0
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | exitmsg: OK
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | cpuconsumptiontime: 45766 s
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | nevents: 400
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | neventsw: 0
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | pid: 1526026
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | pgrp: 1526026
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | corecount: 4
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | event service: False
[2024-04-27 02:04:14] 2024-04-27 00:03:52,603 | INFO     | sizes: {0: 2375516, 1: 2375715, 4: 2375921, 11: 2375949, 12163: 2405728, 12164: 2414710, 12168: 2414894, 12172: 2415064}
[2024-04-27 02:04:14] 2024-04-27 00:03:52,604 | INFO     | --------------------------------------------------
[2024-04-27 02:04:14] 2024-04-27 00:03:52,604 | INFO     | 
[2024-04-27 02:04:14] 2024-04-27 00:03:52,604 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-04-27 02:04:14] 2024-04-27 00:03:52,618 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,620 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,620 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 02:04:14] 2024-04-27 00:03:52,620 | INFO     | job 6182105215 has completed (purged errors)
[2024-04-27 02:04:14] 2024-04-27 00:03:52,620 | INFO     | overall cleanup function is called
[2024-04-27 02:04:14] 2024-04-27 00:03:53,626 | INFO     | --- collectZombieJob: --- 10, [1526026]
[2024-04-27 02:04:14] 2024-04-27 00:03:53,626 | INFO     | zombie collector waiting for pid 1526026
[2024-04-27 02:04:14] 2024-04-27 00:03:53,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 02:04:14] 2024-04-27 00:03:54,632 | INFO     | collected zombie processes
[2024-04-27 02:04:14] 2024-04-27 00:03:54,632 | INFO     | will now attempt to kill all subprocesses of pid=1526026
[2024-04-27 02:04:14] 2024-04-27 00:03:54,727 | INFO     | process IDs to be killed: [1526026] (in reverse order)
[2024-04-27 02:04:14] 2024-04-27 00:03:54,801 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 02:04:14] 2024-04-27 00:03:54,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 02:04:14] 2024-04-27 00:03:54,805 | INFO     | did not find any defunct processes belonging to 1526026
[2024-04-27 02:04:14] 2024-04-27 00:03:54,808 | INFO     | did not find any defunct processes belonging to 1526026
[2024-04-27 02:04:14] 2024-04-27 00:03:54,808 | INFO     | ready for new job
[2024-04-27 02:04:14] 2024-04-27 00:03:54,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 02:04:14] 2024-04-27 00:03:54,809 | INFO     | *************************************
[2024-04-27 02:04:14] 2024-04-27 00:03:54,809 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 02:04:14] 2024-04-27 00:03:54,810 | INFO     | *************************************
[2024-04-27 02:04:14] 2024-04-27 00:03:54,810 | INFO     | 
[2024-04-27 02:04:14] 2024-04-27 00:03:54,811 | INFO     | architecture information:
[2024-04-27 02:04:14] 2024-04-27 00:03:54,811 | INFO     | executing command: cat /etc/os-release
[2024-04-27 02:04:14] 2024-04-27 00:03:54,822 | INFO     | cat /etc/os-release:
[2024-04-27 02:04:14] NAME="CentOS Linux"
[2024-04-27 02:04:14] VERSION="7 (Core)"
[2024-04-27 02:04:14] ID="centos"
[2024-04-27 02:04:14] ID_LIKE="rhel fedora"
[2024-04-27 02:04:14] VERSION_ID="7"
[2024-04-27 02:04:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 02:04:14] ANSI_COLOR="0;31"
[2024-04-27 02:04:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 02:04:14] HOME_URL="https://www.centos.org/"
[2024-04-27 02:04:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 02:04:14] 
[2024-04-27 02:04:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 02:04:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 02:04:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 02:04:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 02:04:14] 
[2024-04-27 02:04:14] 2024-04-27 00:03:54,822 | INFO     | *************************************
[2024-04-27 02:04:14] 2024-04-27 00:03:55,325 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-04-27 02:04:14] 2024-04-27 00:03:55,343 | INFO     | sufficient remaining disk space (1640577892352 B)
[2024-04-27 02:04:14] 2024-04-27 00:03:55,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 02:04:14] 2024-04-27 00:03:55,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 02:04:14] 2024-04-27 00:03:55,344 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 02:04:14] 2024-04-27 00:03:55,344 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 02:04:14] 2024-04-27 00:03:55,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 02:04:14] 2024-04-27 00:03:55,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 02:04:14] 2024-04-27 00:03:55,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 02:04:14] 2024-04-27 00:03:55,618 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-27 02:04:14] 2024-04-27 00:03:55,618 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-27 02:04:14] 2024-04-27 00:03:55,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 02:04:14] 2024-04-27 00:03:55,619 | INFO     | will abort loop
[2024-04-27 02:04:14] 2024-04-27 00:03:55,991 | INFO     | all data control threads have been joined
[2024-04-27 02:04:14] 2024-04-27 00:03:56,311 | INFO     | all payload control threads have been joined
[2024-04-27 02:04:14] 2024-04-27 00:03:56,349 | INFO     | [job] retrieve thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:56,419 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:56,599 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:56,623 | INFO     | [job] job monitor thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:56,907 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:56,953 | INFO     | all job control threads have been joined
[2024-04-27 02:04:14] 2024-04-27 00:03:56,996 | INFO     | [data] control thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:57,128 | INFO     | [data] copytool_in thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:57,317 | INFO     | [payload] control thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:57,424 | INFO     | [data] copytool_out thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:57,448 | INFO     | [payload] failed_post thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:57,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 02:04:14] 2024-04-27 00:03:57,634 | INFO     | [job] validate thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:57,936 | INFO     | [payload] validate_post thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:57,958 | INFO     | [job] control thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:58,616 | INFO     | [job] queue monitor thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:03:58,802 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 02:04:14] 2024-04-27 00:04:02,807 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:04:06,344 | INFO     | job.realtimelogging is not enabled
[2024-04-27 02:04:14] 2024-04-27 00:04:07,348 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 02:04:14] 2024-04-27 00:04:08,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47310935704640)>', '<ExcThread(monitor, started 47311104837376)>']
[2024-04-27 02:04:14] 2024-04-27 00:04:09,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 02:04:14] 2024-04-27 00:04:09,410 | INFO     | [monitor] control thread has ended
[2024-04-27 02:04:14] 2024-04-27 00:04:13,981 | INFO     | all workflow threads have been joined
[2024-04-27 02:04:14] 2024-04-27 00:04:13,981 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 02:04:14] 2024-04-27 00:04:13,982 | INFO     | traces error code: 0
[2024-04-27 02:04:14] 2024-04-27 00:04:13,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 02:04:14] 2024-04-27 00:04:14,044 [wrapper] ==== pilot stdout END ====
[2024-04-27 02:04:14] 2024-04-27 00:04:14,047 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 02:04:14] 2024-04-27 00:04:14,049 [wrapper] pilotpid: 1519180
[2024-04-27 02:04:14] 2024-04-27 00:04:14,051 [wrapper] Pilot exit status: 0
[2024-04-27 02:04:14] 2024-04-27 00:04:14,058 [wrapper] pandaids: 6182105215
[2024-04-27 02:04:14] 2024-04-27 00:04:14,113 [wrapper] cleanup: SIGTERM to supervisor_pilot 1884178 1519181
[2024-04-27 02:04:14] 2024-04-27 00:04:14,115 [wrapper] Test setup, not cleaning
[2024-04-27 02:04:14] 2024-04-27 00:04:14,117 [wrapper] ==== wrapper stdout END ====
[2024-04-27 02:04:14] 2024-04-27 00:04:14,118 [wrapper] ==== wrapper stderr END ====
[2024-04-27 02:04:14] 2024-04-27 00:04:14,122 [wrapper] apfmon messages muted
[2024-04-27 02:04:14]  *** Error codes and diagnostics ***
[2024-04-27 02:04:14]     "exeErrorCode": 0,
[2024-04-27 02:04:14]     "exeErrorDiag": "",
[2024-04-27 02:04:14]     "pilotErrorCode": 0,
[2024-04-27 02:04:14]     "pilotErrorDiag": "",
[2024-04-27 02:04:14]  *** Listing of results directory ***
[2024-04-27 02:04:14] total 697132
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc    462745 Apr 21 09:31 pilot3.tar.gz
[2024-04-27 02:04:14] -rwx------ 1 boinc boinc     32211 Apr 21 09:57 runpilot2-wrapper.sh
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc      6720 Apr 21 09:57 queuedata.json
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc       100 Apr 26 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 02:04:14] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 22:40 run_atlas
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc       105 Apr 26 22:40 job.xml
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc      6457 Apr 26 22:40 init_data.xml
[2024-04-27 02:04:14] -rw-r--r-- 2 boinc boinc 520944772 Apr 26 22:40 EVNT.38204357._000236.pool.root.1
[2024-04-27 02:04:14] drwxrwx--x 2 boinc boinc      4096 Apr 26 22:40 shared
[2024-04-27 02:04:14] -rw-r--r-- 2 boinc boinc    474808 Apr 26 22:40 input.tar.gz
[2024-04-27 02:04:14] -rw-r--r-- 2 boinc boinc     17537 Apr 26 22:40 start_atlas.sh
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc         0 Apr 26 22:40 boinc_lockfile
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc      2622 Apr 26 22:40 pandaJob.out
[2024-04-27 02:04:14] -rw------- 1 boinc boinc       424 Apr 26 22:40 setup.sh.local
[2024-04-27 02:04:14] -rw------- 1 boinc boinc    997399 Apr 26 22:40 agis_schedconf.cvmfs.json
[2024-04-27 02:04:14] -rw------- 1 boinc boinc   1315307 Apr 26 22:40 cric_ddmendpoints.json
[2024-04-27 02:04:14] drwx------ 4 boinc boinc      4096 Apr 26 22:40 pilot3
[2024-04-27 02:04:14] -rw------- 1 boinc boinc 186459867 Apr 27 02:03 HITS.38204359._003207.pool.root.1
[2024-04-27 02:04:14] -rw------- 1 boinc boinc        95 Apr 27 02:03 pilot_heartbeat.json
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc       532 Apr 27 02:03 boinc_task_state.xml
[2024-04-27 02:04:14] -rw------- 1 boinc boinc      1046 Apr 27 02:03 memory_monitor_summary.json
[2024-04-27 02:04:14] -rw------- 1 boinc boinc         0 Apr 27 02:03 agis_ddmendpoints.agis.ALL.json
[2024-04-27 02:04:14] -rw------- 1 boinc boinc    319136 Apr 27 02:03 log.38204359._003207.job.log.tgz.1
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc      8192 Apr 27 02:03 boinc_mmap_file
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc        28 Apr 27 02:03 wrapper_checkpoint.txt
[2024-04-27 02:04:14] -rw------- 1 boinc boinc      7736 Apr 27 02:03 heartbeat.json
[2024-04-27 02:04:14] -rw------- 1 boinc boinc      4603 Apr 27 02:04 pilotlog.txt
[2024-04-27 02:04:14] -rw------- 1 boinc boinc   1165451 Apr 27 02:04 log.38204359._003207.job.log.1
[2024-04-27 02:04:14] -rw------- 1 boinc boinc       357 Apr 27 02:04 output.list
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc       620 Apr 27 02:04 runtime_log
[2024-04-27 02:04:14] -rw------- 1 boinc boinc   1505280 Apr 27 02:04 result.tar.gz
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc     11410 Apr 27 02:04 runtime_log.err
[2024-04-27 02:04:14] -rw------- 1 boinc boinc       657 Apr 27 02:04 kXSNDm4FhI5n7Olcko1bjSoqABFKDmABFKDm2mFKDmKkGKDm8WGIjm.diag
[2024-04-27 02:04:14] -rw-r--r-- 1 boinc boinc     21424 Apr 27 02:04 stderr.txt
[2024-04-27 02:04:14] HITS file was successfully produced:
[2024-04-27 02:04:14] -rw------- 1 boinc boinc 186459867 Apr 27 02:03 shared/HITS.pool.root.1
[2024-04-27 02:04:14]  *** Contents of shared directory: ***
[2024-04-27 02:04:14] total 692792
[2024-04-27 02:04:14] -rw-r--r-- 2 boinc boinc 520944772 Apr 26 22:40 ATLAS.root_0
[2024-04-27 02:04:14] -rw-r--r-- 2 boinc boinc    474808 Apr 26 22:40 input.tar.gz
[2024-04-27 02:04:14] -rw-r--r-- 2 boinc boinc     17537 Apr 26 22:40 start_atlas.sh
[2024-04-27 02:04:14] -rw------- 1 boinc boinc 186459867 Apr 27 02:03 HITS.pool.root.1
[2024-04-27 02:04:14] -rw------- 1 boinc boinc   1505280 Apr 27 02:04 result.tar.gz
02:04:16 (1514797): run_atlas exited; CPU time 45566.591974
02:04:16 (1514797): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN