Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:12:48 (422686): wrapper (7.7.26015): starting
01:12:48 (422686): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 01:12:48] Arguments: --nthreads 4
[2024-04-26 01:12:48] Threads: 4
[2024-04-26 01:12:48] Checking for CVMFS
[2024-04-26 01:12:48] No cvmfs_config command found, will try listing directly
[2024-04-26 01:12:48] CVMFS is ok
[2024-04-26 01:12:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 01:12:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 01:12:48] Further information can be found at the LHC@home message board.
[2024-04-26 01:12:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 01:12:48] Checking for apptainer binary...
[2024-04-26 01:12:48] which: no apptainer in ((null))
[2024-04-26 01:12:48] apptainer is not installed, using version from CVMFS
[2024-04-26 01:12:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 01:12:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-04-26 01:12:49] apptainer works
[2024-04-26 01:12:49] Set ATHENA_PROC_NUMBER=4
[2024-04-26 01:12:49] Set ATHENA_CORE_NUMBER=4
[2024-04-26 01:12:49] Starting ATLAS job with PandaID=6182078816
[2024-04-26 01:12:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 04:00:19]  *** The last 200 lines of the pilot log: ***
[2024-04-26 04:00:19]  filesize=305365
[2024-04-26 04:00:19]  filetype=log
[2024-04-26 04:00:19]  guid=f72c87fa-3000-419c-9f7a-64851c25d5a6
[2024-04-26 04:00:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 04:00:19]  is_tar=False
[2024-04-26 04:00:19]  lfn=log.38204311._000648.job.log.tgz.1
[2024-04-26 04:00:19]  mtime=0
[2024-04-26 04:00:19]  protocol_id=None
[2024-04-26 04:00:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 04:00:19]  replicas=None
[2024-04-26 04:00:19]  scope=mc23_13p6TeV
[2024-04-26 04:00:19]  status=None
[2024-04-26 04:00:19]  status_code=0
[2024-04-26 04:00:19]  storage_token=
[2024-04-26 04:00:19]  surl=/scratch/boinc/var/slot72/slots/1/PanDA_Pilot-6182078816/log.38204311._000648.job.log.tgz.1
[2024-04-26 04:00:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/d5/log.38204311._000648.job.log.tgz.1
[2024-04-26 04:00:19]  workdir=None
[2024-04-26 04:00:19] ]
[2024-04-26 04:00:19] 2024-04-26 01:59:49,782 | INFO     | transferring file log.38204311._000648.job.log.tgz.1 from /scratch/boinc/var/slot72/slots/1/PanDA_Pilot-6182078816/log.38204311._000648.job.log.tgz.1 to /scratch/b
[2024-04-26 04:00:19] 2024-04-26 01:59:49,782 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot72/slots/1/PanDA_Pilot-6182078816/log.38204311._000648.job.log.tgz.1 /scratch/boinc/var/slot72/slots/1/lo
[2024-04-26 04:00:19] 2024-04-26 01:59:49,807 | INFO     | adding to output.list: log.38204311._000648.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/d5/log.38204311._000648.job.log.tg
[2024-04-26 04:00:19] 2024-04-26 01:59:49,808 | INFO     | summary of transferred files:
[2024-04-26 04:00:19] 2024-04-26 01:59:49,809 | INFO     |  -- lfn=log.38204311._000648.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 04:00:19] 2024-04-26 01:59:49,809 | INFO     | stage-out finished correctly
[2024-04-26 04:00:19] 2024-04-26 01:59:49,847 | INFO     | monitor loop #760: job 0:6182078816 is in state 'finished'
[2024-04-26 04:00:19] 2024-04-26 01:59:49,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 04:00:19] 2024-04-26 01:59:52,100 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 04:00:19] 2024-04-26 01:59:52,360 | INFO     | monitor loop #761: job 0:6182078816 is in state 'finished'
[2024-04-26 04:00:19] 2024-04-26 01:59:52,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 04:00:19] 2024-04-26 01:59:53,040 | INFO     | job 6182078816 has state=finished
[2024-04-26 04:00:19] 2024-04-26 01:59:53,040 | INFO     | preparing for final server update for job 6182078816 in state='finished'
[2024-04-26 04:00:19] 2024-04-26 01:59:53,040 | INFO     | this job has now completed (state=finished)
[2024-04-26 04:00:19] 2024-04-26 01:59:53,041 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 04:00:19] 2024-04-26 01:59:53,041 | INFO     | job 6182078816 has finished - writing final server update
[2024-04-26 04:00:19] 2024-04-26 01:59:53,041 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_495636/.job.ad'
[2024-04-26 04:00:19] 2024-04-26 01:59:53,041 | INFO     | total number of processed events: 400 (read)
[2024-04-26 04:00:19] 2024-04-26 01:59:53,049 | INFO     | executing command: lscpu
[2024-04-26 04:00:19] 2024-04-26 01:59:53,104 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-26 04:00:19] 2024-04-26 01:59:53,105 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 04:00:19] 2024-04-26 01:59:53,147 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 04:00:19] 2024-04-26 01:59:54,863 | INFO     | monitor loop #762: job 0:6182078816 is in state 'finished'
[2024-04-26 04:00:19] 2024-04-26 01:59:54,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,280 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 04:00:19] 2024-04-26 01:59:57,280 | INFO     | using path: /scratch/boinc/var/slot72/slots/1/PanDA_Pilot-6182078816/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,281 | INFO     | extracted standard info from prmon json
[2024-04-26 04:00:19] 2024-04-26 01:59:57,281 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 04:00:19] 2024-04-26 01:59:57,282 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 04:00:19] 2024-04-26 01:59:57,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 04:00:19] 2024-04-26 01:59:57,285 | INFO     | fitting pss+swap vs Time
[2024-04-26 04:00:19] 2024-04-26 01:59:57,287 | INFO     | current chi2=4.296484076532721 (change=0.07548267814181175 %)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,287 | INFO     | right removable region: 158
[2024-04-26 04:00:19] 2024-04-26 01:59:57,288 | INFO     | current chi2=1.709822158937395 (change=60.2341936116482 %)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,289 | INFO     | current chi2=0.08313792610948065 (change=95.13762728627002 %)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,290 | INFO     | current chi2=0.0006394344618314243 (change=99.23087513514665 %)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,291 | INFO     | current chi2=0.00028683822054497435 (change=55.14188901808138 %)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,292 | INFO     | current chi2=0.0002653965995863126 (change=7.475161754219513 %)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,292 | INFO     | left removable region: 50
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | current memory leak: -0.24 B/s (using 108 data points, chi2=0.00)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | ..............................
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | . Timing measurements:
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | . get job = 0 s
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | . initial setup = 1 s
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | . payload setup = 6 s
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | . stage-in = 0 s
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | . payload execution = 9982 s
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | . stage-out = 0 s
[2024-04-26 04:00:19] 2024-04-26 01:59:57,293 | INFO     | . log creation = 0 s
[2024-04-26 04:00:19] 2024-04-26 01:59:57,294 | INFO     | ..............................
[2024-04-26 04:00:19] 2024-04-26 01:59:57,360 | INFO     | 
[2024-04-26 04:00:19] 2024-04-26 01:59:57,360 | INFO     | job summary report
[2024-04-26 04:00:19] 2024-04-26 01:59:57,360 | INFO     | --------------------------------------------------
[2024-04-26 04:00:19] 2024-04-26 01:59:57,360 | INFO     | PanDA job id: 6182078816
[2024-04-26 04:00:19] 2024-04-26 01:59:57,360 | INFO     | task id: 38204311
[2024-04-26 04:00:19] 2024-04-26 01:59:57,360 | INFO     | errors: (none)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,360 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | pilot state: finished 
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | transexitcode: 0
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | exeerrorcode: 0
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | exeerrordiag: 
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | exitcode: 0
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | exitmsg: OK
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | cpuconsumptiontime: 37057 s
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | nevents: 400
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | neventsw: 0
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | pid: 434911
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | pgrp: 434911
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | corecount: 4
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | event service: False
[2024-04-26 04:00:19] 2024-04-26 01:59:57,361 | INFO     | sizes: {0: 2375467, 1: 2375638, 5: 2375844, 11: 2375900, 9993: 2404455, 9994: 2413437, 9996: 2413621, 10001: 2413791}
[2024-04-26 04:00:19] 2024-04-26 01:59:57,362 | INFO     | --------------------------------------------------
[2024-04-26 04:00:19] 2024-04-26 01:59:57,362 | INFO     | 
[2024-04-26 04:00:19] 2024-04-26 01:59:57,362 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/1
[2024-04-26 04:00:19] 2024-04-26 01:59:57,380 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,380 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,380 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,382 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,382 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 04:00:19] 2024-04-26 01:59:57,382 | INFO     | job 6182078816 has completed (purged errors)
[2024-04-26 04:00:19] 2024-04-26 01:59:57,382 | INFO     | overall cleanup function is called
[2024-04-26 04:00:19] 2024-04-26 01:59:58,389 | INFO     | --- collectZombieJob: --- 10, [434911]
[2024-04-26 04:00:19] 2024-04-26 01:59:58,390 | INFO     | zombie collector waiting for pid 434911
[2024-04-26 04:00:19] 2024-04-26 01:59:58,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 04:00:19] 2024-04-26 01:59:59,394 | INFO     | collected zombie processes
[2024-04-26 04:00:19] 2024-04-26 01:59:59,394 | INFO     | will now attempt to kill all subprocesses of pid=434911
[2024-04-26 04:00:19] 2024-04-26 01:59:59,596 | INFO     | process IDs to be killed: [434911] (in reverse order)
[2024-04-26 04:00:19] 2024-04-26 01:59:59,748 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 04:00:19] 2024-04-26 01:59:59,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 04:00:19] 2024-04-26 01:59:59,761 | INFO     | did not find any defunct processes belonging to 434911
[2024-04-26 04:00:19] 2024-04-26 01:59:59,769 | INFO     | did not find any defunct processes belonging to 434911
[2024-04-26 04:00:19] 2024-04-26 01:59:59,769 | INFO     | ready for new job
[2024-04-26 04:00:19] 2024-04-26 01:59:59,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 04:00:19] 2024-04-26 01:59:59,771 | INFO     | *************************************
[2024-04-26 04:00:19] 2024-04-26 01:59:59,771 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 04:00:19] 2024-04-26 01:59:59,771 | INFO     | *************************************
[2024-04-26 04:00:19] 2024-04-26 01:59:59,771 | INFO     | 
[2024-04-26 04:00:19] 2024-04-26 01:59:59,776 | INFO     | architecture information:
[2024-04-26 04:00:19] 2024-04-26 01:59:59,776 | INFO     | executing command: cat /etc/os-release
[2024-04-26 04:00:19] 2024-04-26 01:59:59,789 | INFO     | cat /etc/os-release:
[2024-04-26 04:00:19] NAME="CentOS Linux"
[2024-04-26 04:00:19] VERSION="7 (Core)"
[2024-04-26 04:00:19] ID="centos"
[2024-04-26 04:00:19] ID_LIKE="rhel fedora"
[2024-04-26 04:00:19] VERSION_ID="7"
[2024-04-26 04:00:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 04:00:19] ANSI_COLOR="0;31"
[2024-04-26 04:00:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 04:00:19] HOME_URL="https://www.centos.org/"
[2024-04-26 04:00:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 04:00:19] 
[2024-04-26 04:00:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 04:00:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 04:00:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 04:00:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 04:00:19] 
[2024-04-26 04:00:19] 2024-04-26 01:59:59,790 | INFO     | *************************************
[2024-04-26 04:00:19] 2024-04-26 02:00:00,293 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/1
[2024-04-26 04:00:19] 2024-04-26 02:00:00,321 | INFO     | sufficient remaining disk space (3051252350976 B)
[2024-04-26 04:00:19] 2024-04-26 02:00:00,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 04:00:19] 2024-04-26 02:00:00,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 04:00:19] 2024-04-26 02:00:00,322 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 04:00:19] 2024-04-26 02:00:00,323 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 04:00:19] 2024-04-26 02:00:00,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 04:00:19] 2024-04-26 02:00:00,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 04:00:19] 2024-04-26 02:00:00,325 | INFO     | all data control threads have been joined
[2024-04-26 04:00:19] 2024-04-26 02:00:00,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 04:00:19] 2024-04-26 02:00:00,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 04:00:19] 2024-04-26 02:00:00,876 | INFO     | aborting loop
[2024-04-26 04:00:19] 2024-04-26 02:00:01,327 | INFO     | [job] retrieve thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:01,330 | INFO     | [data] control thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:01,475 | INFO     | [payload] failed_post thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:01,525 | INFO     | all payload control threads have been joined
[2024-04-26 04:00:19] 2024-04-26 02:00:01,675 | INFO     | all job control threads have been joined
[2024-04-26 04:00:19] 2024-04-26 02:00:01,715 | INFO     | [data] copytool_in thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:01,797 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:01,880 | INFO     | [job] job monitor thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:01,977 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:02,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 04:00:19] 2024-04-26 02:00:02,422 | INFO     | [data] copytool_out thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:02,530 | INFO     | [payload] control thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:02,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 04:00:19] 2024-04-26 02:00:02,680 | INFO     | [job] validate thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:02,681 | INFO     | [job] control thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:02,757 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:02,869 | INFO     | [payload] validate_post thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:03,374 | INFO     | [job] queue monitor thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:06,679 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:11,175 | INFO     | job.realtimelogging is not enabled
[2024-04-26 04:00:19] 2024-04-26 02:00:12,180 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 04:00:19] 2024-04-26 02:00:13,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47007606944832)>', '<ExcThread(monitor, started 47007773976320)>']
[2024-04-26 04:00:19] 2024-04-26 02:00:14,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 04:00:19] 2024-04-26 02:00:14,393 | INFO     | [monitor] control thread has ended
[2024-04-26 04:00:19] 2024-04-26 02:00:18,756 | INFO     | all workflow threads have been joined
[2024-04-26 04:00:19] 2024-04-26 02:00:18,757 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 04:00:19] 2024-04-26 02:00:18,757 | INFO     | traces error code: 0
[2024-04-26 04:00:19] 2024-04-26 02:00:18,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 04:00:19] 2024-04-26 02:00:18,878 [wrapper] ==== pilot stdout END ====
[2024-04-26 04:00:19] 2024-04-26 02:00:18,881 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 04:00:19] 2024-04-26 02:00:18,883 [wrapper] pilotpid: 427318
[2024-04-26 04:00:19] 2024-04-26 02:00:18,886 [wrapper] Pilot exit status: 0
[2024-04-26 04:00:19] 2024-04-26 02:00:18,896 [wrapper] pandaids: 6182078816
[2024-04-26 04:00:19] 2024-04-26 02:00:19,001 [wrapper] cleanup: SIGTERM to supervisor_pilot 1419833 427319
[2024-04-26 04:00:19] 2024-04-26 02:00:19,004 [wrapper] Test setup, not cleaning
[2024-04-26 04:00:19] 2024-04-26 02:00:19,006 [wrapper] ==== wrapper stdout END ====
[2024-04-26 04:00:19] 2024-04-26 02:00:19,009 [wrapper] ==== wrapper stderr END ====
[2024-04-26 04:00:19] 2024-04-26 02:00:19,013 [wrapper] apfmon messages muted
[2024-04-26 04:00:19]  *** Error codes and diagnostics ***
[2024-04-26 04:00:19]     "exeErrorCode": 0,
[2024-04-26 04:00:19]     "exeErrorDiag": "",
[2024-04-26 04:00:19]     "pilotErrorCode": 0,
[2024-04-26 04:00:19]     "pilotErrorDiag": "",
[2024-04-26 04:00:19]  *** Listing of results directory ***
[2024-04-26 04:00:19] total 620164
[2024-04-26 04:00:19] -rwx------ 1 boinc boinc     32211 Apr 21 09:14 runpilot2-wrapper.sh
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc      6720 Apr 21 09:14 queuedata.json
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc    462745 Apr 21 09:14 pilot3.tar.gz
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc       100 Apr 26 01:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 04:00:19] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 01:12 run_atlas
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc       105 Apr 26 01:12 job.xml
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc      6643 Apr 26 01:12 init_data.xml
[2024-04-26 04:00:19] -rw-r--r-- 2 boinc boinc 451638138 Apr 26 01:12 EVNT.38204309._000048.pool.root.1
[2024-04-26 04:00:19] -rw-r--r-- 2 boinc boinc     17537 Apr 26 01:12 start_atlas.sh
[2024-04-26 04:00:19] drwxrwx--x 2 boinc boinc      4096 Apr 26 01:12 shared
[2024-04-26 04:00:19] -rw-r--r-- 2 boinc boinc    474792 Apr 26 01:12 input.tar.gz
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc         0 Apr 26 01:12 boinc_lockfile
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc      2604 Apr 26 01:12 pandaJob.out
[2024-04-26 04:00:19] -rw------- 1 boinc boinc       424 Apr 26 01:12 setup.sh.local
[2024-04-26 04:00:19] -rw------- 1 boinc boinc    993582 Apr 26 01:12 agis_schedconf.cvmfs.json
[2024-04-26 04:00:19] -rw------- 1 boinc boinc         0 Apr 26 01:12 agis_ddmendpoints.agis.ALL.json
[2024-04-26 04:00:19] -rw------- 1 boinc boinc   1315307 Apr 26 01:12 cric_ddmendpoints.json
[2024-04-26 04:00:19] drwx------ 4 boinc boinc      4096 Apr 26 01:13 pilot3
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc       530 Apr 26 03:59 boinc_task_state.xml
[2024-04-26 04:00:19] -rw------- 1 boinc boinc 177423935 Apr 26 03:59 HITS.38204311._000648.pool.root.1
[2024-04-26 04:00:19] -rw------- 1 boinc boinc        95 Apr 26 03:59 pilot_heartbeat.json
[2024-04-26 04:00:19] -rw------- 1 boinc boinc      1041 Apr 26 03:59 memory_monitor_summary.json
[2024-04-26 04:00:19] -rw------- 1 boinc boinc    305365 Apr 26 03:59 log.38204311._000648.job.log.tgz.1
[2024-04-26 04:00:19] -rw------- 1 boinc boinc      7690 Apr 26 03:59 heartbeat.json
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc        28 Apr 26 04:00 wrapper_checkpoint.txt
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc      8192 Apr 26 04:00 boinc_mmap_file
[2024-04-26 04:00:19] -rw------- 1 boinc boinc      4417 Apr 26 04:00 pilotlog.txt
[2024-04-26 04:00:19] -rw------- 1 boinc boinc    945705 Apr 26 04:00 log.38204311._000648.job.log.1
[2024-04-26 04:00:19] -rw------- 1 boinc boinc       357 Apr 26 04:00 output.list
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc       620 Apr 26 04:00 runtime_log
[2024-04-26 04:00:19] -rw------- 1 boinc boinc   1269760 Apr 26 04:00 result.tar.gz
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc     11410 Apr 26 04:00 runtime_log.err
[2024-04-26 04:00:19] -rw------- 1 boinc boinc       658 Apr 26 04:00 ArJKDm7ZgI5n7Olcko1bjSoqABFKDmABFKDm2mFKDm5iGKDmbJt27m.diag
[2024-04-26 04:00:19] -rw-r--r-- 1 boinc boinc     21307 Apr 26 04:00 stderr.txt
[2024-04-26 04:00:19] HITS file was successfully produced:
[2024-04-26 04:00:19] -rw------- 1 boinc boinc 177423935 Apr 26 03:59 shared/HITS.pool.root.1
[2024-04-26 04:00:19]  *** Contents of shared directory: ***
[2024-04-26 04:00:19] total 616056
[2024-04-26 04:00:19] -rw-r--r-- 2 boinc boinc 451638138 Apr 26 01:12 ATLAS.root_0
[2024-04-26 04:00:19] -rw-r--r-- 2 boinc boinc     17537 Apr 26 01:12 start_atlas.sh
[2024-04-26 04:00:19] -rw-r--r-- 2 boinc boinc    474792 Apr 26 01:12 input.tar.gz
[2024-04-26 04:00:19] -rw------- 1 boinc boinc 177423935 Apr 26 03:59 HITS.pool.root.1
[2024-04-26 04:00:19] -rw------- 1 boinc boinc   1269760 Apr 26 04:00 result.tar.gz
04:00:21 (422686): run_atlas exited; CPU time 36814.794178
04:00:21 (422686): called boinc_finish(0)

</stderr_txt>
]]>

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