Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:00:28 (290397): wrapper (7.7.26015): starting
01:00:28 (290397): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 01:00:28] Arguments: --nthreads 4
[2024-04-26 01:00:28] Threads: 4
[2024-04-26 01:00:28] Checking for CVMFS
[2024-04-26 01:00:28] No cvmfs_config command found, will try listing directly
[2024-04-26 01:00:28] CVMFS is ok
[2024-04-26 01:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 01:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 01:00:28] Further information can be found at the LHC@home message board.
[2024-04-26 01:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 01:00:28] Checking for apptainer binary...
[2024-04-26 01:00:28] which: no apptainer in ((null))
[2024-04-26 01:00:28] apptainer is not installed, using version from CVMFS
[2024-04-26 01:00:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 01:00:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-04-26 01:00:29] apptainer works
[2024-04-26 01:00:29] Set ATHENA_PROC_NUMBER=4
[2024-04-26 01:00:29] Set ATHENA_CORE_NUMBER=4
[2024-04-26 01:00:29] Starting ATLAS job with PandaID=6181727984
[2024-04-26 01:00:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 03:59:25]  *** The last 200 lines of the pilot log: ***
[2024-04-26 03:59:25]  filesize=309433
[2024-04-26 03:59:25]  filetype=log
[2024-04-26 03:59:25]  guid=047c6a0a-3e01-4fb2-9196-e3a6a88ac0ec
[2024-04-26 03:59:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 03:59:25]  is_tar=False
[2024-04-26 03:59:25]  lfn=log.38204279._019936.job.log.tgz.1
[2024-04-26 03:59:25]  mtime=0
[2024-04-26 03:59:25]  protocol_id=None
[2024-04-26 03:59:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 03:59:25]  replicas=None
[2024-04-26 03:59:25]  scope=mc23_13p6TeV
[2024-04-26 03:59:25]  status=None
[2024-04-26 03:59:25]  status_code=0
[2024-04-26 03:59:25]  storage_token=
[2024-04-26 03:59:25]  surl=/scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6181727984/log.38204279._019936.job.log.tgz.1
[2024-04-26 03:59:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/7b/log.38204279._019936.job.log.tgz.1
[2024-04-26 03:59:25]  workdir=None
[2024-04-26 03:59:25] ]
[2024-04-26 03:59:25] 2024-04-26 01:59:03,735 | INFO     | transferring file log.38204279._019936.job.log.tgz.1 from /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6181727984/log.38204279._019936.job.log.tgz.1 to /scratch/b
[2024-04-26 03:59:25] 2024-04-26 01:59:03,735 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6181727984/log.38204279._019936.job.log.tgz.1 /scratch/boinc/var/slot52/slots/0/lo
[2024-04-26 03:59:25] 2024-04-26 01:59:03,753 | INFO     | adding to output.list: log.38204279._019936.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/7b/log.38204279._019936.job.log.tg
[2024-04-26 03:59:25] 2024-04-26 01:59:03,754 | INFO     | summary of transferred files:
[2024-04-26 03:59:25] 2024-04-26 01:59:03,754 | INFO     |  -- lfn=log.38204279._019936.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 03:59:25] 2024-04-26 01:59:03,754 | INFO     | stage-out finished correctly
[2024-04-26 03:59:25] 2024-04-26 01:59:03,791 | INFO     | monitor loop #827: job 0:6181727984 is in state 'finished'
[2024-04-26 03:59:25] 2024-04-26 01:59:03,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 03:59:25] 2024-04-26 01:59:04,762 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 03:59:25] 2024-04-26 01:59:06,317 | INFO     | monitor loop #828: job 0:6181727984 is in state 'finished'
[2024-04-26 03:59:25] 2024-04-26 01:59:06,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 03:59:25] 2024-04-26 01:59:06,483 | INFO     | 10709s have passed since pilot start
[2024-04-26 03:59:25] 2024-04-26 01:59:07,526 | INFO     | job 6181727984 has state=finished
[2024-04-26 03:59:25] 2024-04-26 01:59:07,526 | INFO     | preparing for final server update for job 6181727984 in state='finished'
[2024-04-26 03:59:25] 2024-04-26 01:59:07,527 | INFO     | this job has now completed (state=finished)
[2024-04-26 03:59:25] 2024-04-26 01:59:07,527 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 03:59:25] 2024-04-26 01:59:07,527 | INFO     | job 6181727984 has finished - writing final server update
[2024-04-26 03:59:25] 2024-04-26 01:59:07,527 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3371690/.job.ad'
[2024-04-26 03:59:25] 2024-04-26 01:59:07,527 | INFO     | total number of processed events: 400 (read)
[2024-04-26 03:59:25] 2024-04-26 01:59:07,530 | INFO     | executing command: lscpu
[2024-04-26 03:59:25] 2024-04-26 01:59:07,569 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 03:59:25] 2024-04-26 01:59:07,570 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 03:59:25] 2024-04-26 01:59:07,597 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 03:59:25] 2024-04-26 01:59:08,820 | INFO     | monitor loop #829: job 0:6181727984 is in state 'finished'
[2024-04-26 03:59:25] 2024-04-26 01:59:08,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 03:59:25] 2024-04-26 01:59:10,913 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 03:59:25] 2024-04-26 01:59:10,914 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6181727984/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 03:59:25] 2024-04-26 01:59:10,915 | INFO     | extracted standard info from prmon json
[2024-04-26 03:59:25] 2024-04-26 01:59:10,915 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 03:59:25] 2024-04-26 01:59:10,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 03:59:25] 2024-04-26 01:59:10,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 03:59:25] 2024-04-26 01:59:10,919 | INFO     | fitting pss+swap vs Time
[2024-04-26 03:59:25] 2024-04-26 01:59:10,922 | INFO     | current chi2=3.922697196103812 (change=16.970293106106887 %)
[2024-04-26 03:59:25] 2024-04-26 01:59:10,922 | INFO     | right removable region: 170
[2024-04-26 03:59:25] 2024-04-26 01:59:10,923 | INFO     | current chi2=2.350555139960485 (change=50.24701256505346 %)
[2024-04-26 03:59:25] 2024-04-26 01:59:10,924 | INFO     | current chi2=0.9042146642708889 (change=61.531867561886266 %)
[2024-04-26 03:59:25] 2024-04-26 01:59:10,926 | INFO     | current chi2=0.8417216839519388 (change=6.911299140380693 %)
[2024-04-26 03:59:25] 2024-04-26 01:59:10,926 | INFO     | left removable region: 30
[2024-04-26 03:59:25] 2024-04-26 01:59:10,927 | INFO     | current memory leak: 2.68 B/s (using 140 data points, chi2=0.00)
[2024-04-26 03:59:25] 2024-04-26 01:59:10,927 | INFO     | ..............................
[2024-04-26 03:59:25] 2024-04-26 01:59:10,927 | INFO     | . Timing measurements:
[2024-04-26 03:59:25] 2024-04-26 01:59:10,927 | INFO     | . get job = 0 s
[2024-04-26 03:59:25] 2024-04-26 01:59:10,927 | INFO     | . initial setup = 1 s
[2024-04-26 03:59:25] 2024-04-26 01:59:10,928 | INFO     | . payload setup = 4 s
[2024-04-26 03:59:25] 2024-04-26 01:59:10,928 | INFO     | . stage-in = 0 s
[2024-04-26 03:59:25] 2024-04-26 01:59:10,928 | INFO     | . payload execution = 10681 s
[2024-04-26 03:59:25] 2024-04-26 01:59:10,928 | INFO     | . stage-out = 0 s
[2024-04-26 03:59:25] 2024-04-26 01:59:10,928 | INFO     | . log creation = 0 s
[2024-04-26 03:59:25] 2024-04-26 01:59:10,928 | INFO     | ..............................
[2024-04-26 03:59:25] 2024-04-26 01:59:10,984 | INFO     | 
[2024-04-26 03:59:25] 2024-04-26 01:59:10,985 | INFO     | job summary report
[2024-04-26 03:59:25] 2024-04-26 01:59:10,985 | INFO     | --------------------------------------------------
[2024-04-26 03:59:25] 2024-04-26 01:59:10,985 | INFO     | PanDA job id: 6181727984
[2024-04-26 03:59:25] 2024-04-26 01:59:10,985 | INFO     | task id: 38204279
[2024-04-26 03:59:25] 2024-04-26 01:59:10,985 | INFO     | errors: (none)
[2024-04-26 03:59:25] 2024-04-26 01:59:10,985 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 03:59:25] 2024-04-26 01:59:10,985 | INFO     | pilot state: finished 
[2024-04-26 03:59:25] 2024-04-26 01:59:10,985 | INFO     | transexitcode: 0
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | exeerrorcode: 0
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | exeerrordiag: 
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | exitcode: 0
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | exitmsg: OK
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | cpuconsumptiontime: 40092 s
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | nevents: 400
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | neventsw: 0
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | pid: 304010
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | pgrp: 304010
[2024-04-26 03:59:25] 2024-04-26 01:59:10,986 | INFO     | corecount: 4
[2024-04-26 03:59:25] 2024-04-26 01:59:10,987 | INFO     | event service: False
[2024-04-26 03:59:25] 2024-04-26 01:59:10,987 | INFO     | sizes: {0: 2375641, 4: 2375847, 11: 2375875, 10689: 2404896, 10691: 2413878, 10692: 2413934, 10698: 2414232}
[2024-04-26 03:59:25] 2024-04-26 01:59:10,987 | INFO     | --------------------------------------------------
[2024-04-26 03:59:25] 2024-04-26 01:59:10,987 | INFO     | 
[2024-04-26 03:59:25] 2024-04-26 01:59:10,987 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2024-04-26 03:59:25] 2024-04-26 01:59:11,011 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,011 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,011 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,011 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,013 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 03:59:25] 2024-04-26 01:59:11,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,013 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 03:59:25] 2024-04-26 01:59:11,013 | INFO     | job 6181727984 has completed (purged errors)
[2024-04-26 03:59:25] 2024-04-26 01:59:11,013 | INFO     | overall cleanup function is called
[2024-04-26 03:59:25] 2024-04-26 01:59:12,021 | INFO     | --- collectZombieJob: --- 10, [304010]
[2024-04-26 03:59:25] 2024-04-26 01:59:12,021 | INFO     | zombie collector waiting for pid 304010
[2024-04-26 03:59:25] 2024-04-26 01:59:12,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 03:59:25] 2024-04-26 01:59:13,026 | INFO     | collected zombie processes
[2024-04-26 03:59:25] 2024-04-26 01:59:13,026 | INFO     | will now attempt to kill all subprocesses of pid=304010
[2024-04-26 03:59:25] 2024-04-26 01:59:13,172 | INFO     | process IDs to be killed: [304010] (in reverse order)
[2024-04-26 03:59:25] 2024-04-26 01:59:13,257 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 03:59:25] 2024-04-26 01:59:13,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 03:59:25] 2024-04-26 01:59:13,263 | INFO     | did not find any defunct processes belonging to 304010
[2024-04-26 03:59:25] 2024-04-26 01:59:13,269 | INFO     | did not find any defunct processes belonging to 304010
[2024-04-26 03:59:25] 2024-04-26 01:59:13,269 | INFO     | ready for new job
[2024-04-26 03:59:25] 2024-04-26 01:59:13,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 03:59:25] 2024-04-26 01:59:13,270 | INFO     | *************************************
[2024-04-26 03:59:25] 2024-04-26 01:59:13,271 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 03:59:25] 2024-04-26 01:59:13,271 | INFO     | *************************************
[2024-04-26 03:59:25] 2024-04-26 01:59:13,271 | INFO     | 
[2024-04-26 03:59:25] 2024-04-26 01:59:13,273 | INFO     | architecture information:
[2024-04-26 03:59:25] 2024-04-26 01:59:13,274 | INFO     | executing command: cat /etc/os-release
[2024-04-26 03:59:25] 2024-04-26 01:59:13,290 | INFO     | cat /etc/os-release:
[2024-04-26 03:59:25] NAME="CentOS Linux"
[2024-04-26 03:59:25] VERSION="7 (Core)"
[2024-04-26 03:59:25] ID="centos"
[2024-04-26 03:59:25] ID_LIKE="rhel fedora"
[2024-04-26 03:59:25] VERSION_ID="7"
[2024-04-26 03:59:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 03:59:25] ANSI_COLOR="0;31"
[2024-04-26 03:59:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 03:59:25] HOME_URL="https://www.centos.org/"
[2024-04-26 03:59:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 03:59:25] 
[2024-04-26 03:59:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 03:59:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 03:59:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 03:59:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 03:59:25] 
[2024-04-26 03:59:25] 2024-04-26 01:59:13,290 | INFO     | *************************************
[2024-04-26 03:59:25] 2024-04-26 01:59:13,793 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2024-04-26 03:59:25] 2024-04-26 01:59:13,809 | INFO     | sufficient remaining disk space (619264868352 B)
[2024-04-26 03:59:25] 2024-04-26 01:59:13,809 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 03:59:25] 2024-04-26 01:59:13,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 03:59:25] 2024-04-26 01:59:13,810 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 03:59:25] 2024-04-26 01:59:13,810 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 03:59:25] 2024-04-26 01:59:13,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 03:59:25] 2024-04-26 01:59:13,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 03:59:25] 2024-04-26 01:59:13,830 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-26 03:59:25] 2024-04-26 01:59:13,830 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-26 03:59:25] 2024-04-26 01:59:13,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 03:59:25] 2024-04-26 01:59:13,831 | INFO     | will abort loop
[2024-04-26 03:59:25] 2024-04-26 01:59:14,204 | INFO     | all data control threads have been joined
[2024-04-26 03:59:25] 2024-04-26 01:59:14,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 03:59:25] 2024-04-26 01:59:14,408 | INFO     | all job control threads have been joined
[2024-04-26 03:59:25] 2024-04-26 01:59:14,503 | INFO     | all payload control threads have been joined
[2024-04-26 03:59:25] 2024-04-26 01:59:14,815 | INFO     | [job] retrieve thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:14,836 | INFO     | [job] job monitor thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,070 | INFO     | [payload] failed_post thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,209 | INFO     | [data] control thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 03:59:25] 2024-04-26 01:59:15,389 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,413 | INFO     | [job] control thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,441 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,458 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,508 | INFO     | [payload] control thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,525 | INFO     | [job] validate thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,788 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,850 | INFO     | [data] copytool_in thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:15,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 03:59:25] 2024-04-26 01:59:16,310 | INFO     | [payload] validate_post thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:16,325 | INFO     | [data] copytool_out thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:17,000 | INFO     | [job] queue monitor thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:19,328 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 03:59:25] 2024-04-26 01:59:19,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47537937007680)>', '<ExcThread(monitor, started 47538581280512)>']
[2024-04-26 03:59:25] 2024-04-26 01:59:19,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 03:59:25] 2024-04-26 01:59:19,834 | INFO     | [monitor] control thread has ended
[2024-04-26 03:59:25] 2024-04-26 01:59:24,565 | INFO     | all workflow threads have been joined
[2024-04-26 03:59:25] 2024-04-26 01:59:24,565 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 03:59:25] 2024-04-26 01:59:24,565 | INFO     | traces error code: 0
[2024-04-26 03:59:25] 2024-04-26 01:59:24,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 03:59:25] 2024-04-26 01:59:24,665 [wrapper] ==== pilot stdout END ====
[2024-04-26 03:59:25] 2024-04-26 01:59:24,667 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 03:59:25] 2024-04-26 01:59:24,670 [wrapper] pilotpid: 296900
[2024-04-26 03:59:25] 2024-04-26 01:59:24,672 [wrapper] Pilot exit status: 0
[2024-04-26 03:59:25] 2024-04-26 01:59:24,684 [wrapper] pandaids: 6181727984
[2024-04-26 03:59:25] 2024-04-26 01:59:24,761 [wrapper] cleanup: SIGTERM to supervisor_pilot  744882 296901
[2024-04-26 03:59:25] 2024-04-26 01:59:24,764 [wrapper] Test setup, not cleaning
[2024-04-26 03:59:25] 2024-04-26 01:59:24,766 [wrapper] ==== wrapper stdout END ====
[2024-04-26 03:59:25] 2024-04-26 01:59:24,769 [wrapper] ==== wrapper stderr END ====
[2024-04-26 03:59:25] 2024-04-26 01:59:24,778 [wrapper] apfmon messages muted
[2024-04-26 03:59:25]  *** Error codes and diagnostics ***
[2024-04-26 03:59:25]     "exeErrorCode": 0,
[2024-04-26 03:59:25]     "exeErrorDiag": "",
[2024-04-26 03:59:25]     "pilotErrorCode": 0,
[2024-04-26 03:59:25]     "pilotErrorDiag": "",
[2024-04-26 03:59:25]  *** Listing of results directory ***
[2024-04-26 03:59:25] total 621268
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc    462745 Apr 21 02:54 pilot3.tar.gz
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc      6720 Apr 21 02:56 queuedata.json
[2024-04-26 03:59:25] -rwx------ 1 boinc boinc     32211 Apr 21 02:56 runpilot2-wrapper.sh
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc       100 Apr 26 01:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 03:59:25] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 01:00 run_atlas
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc       105 Apr 26 01:00 job.xml
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc      6663 Apr 26 01:00 init_data.xml
[2024-04-26 03:59:25] -rw-r--r-- 2 boinc boinc 454780218 Apr 26 01:00 EVNT.38204277._000761.pool.root.1
[2024-04-26 03:59:25] -rw-r--r-- 2 boinc boinc     17537 Apr 26 01:00 start_atlas.sh
[2024-04-26 03:59:25] drwxrwx--x 2 boinc boinc      4096 Apr 26 01:00 shared
[2024-04-26 03:59:25] -rw-r--r-- 2 boinc boinc    474798 Apr 26 01:00 input.tar.gz
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc         0 Apr 26 01:00 boinc_lockfile
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc      2584 Apr 26 01:00 pandaJob.out
[2024-04-26 03:59:25] -rw------- 1 boinc boinc       424 Apr 26 01:00 setup.sh.local
[2024-04-26 03:59:25] -rw------- 1 boinc boinc    993582 Apr 26 01:00 agis_schedconf.cvmfs.json
[2024-04-26 03:59:25] -rw------- 1 boinc boinc         0 Apr 26 01:00 agis_ddmendpoints.agis.ALL.json
[2024-04-26 03:59:25] -rw------- 1 boinc boinc   1315307 Apr 26 01:00 cric_ddmendpoints.json
[2024-04-26 03:59:25] drwx------ 4 boinc boinc      4096 Apr 26 01:00 pilot3
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc       531 Apr 26 03:58 boinc_task_state.xml
[2024-04-26 03:59:25] -rw------- 1 boinc boinc 175247851 Apr 26 03:58 HITS.38204279._019936.pool.root.1
[2024-04-26 03:59:25] -rw------- 1 boinc boinc      1046 Apr 26 03:58 memory_monitor_summary.json
[2024-04-26 03:59:25] -rw------- 1 boinc boinc    309433 Apr 26 03:59 log.38204279._019936.job.log.tgz.1
[2024-04-26 03:59:25] -rw------- 1 boinc boinc        95 Apr 26 03:59 pilot_heartbeat.json
[2024-04-26 03:59:25] -rw------- 1 boinc boinc      7735 Apr 26 03:59 heartbeat.json
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc        28 Apr 26 03:59 wrapper_checkpoint.txt
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc      8192 Apr 26 03:59 boinc_mmap_file
[2024-04-26 03:59:25] -rw------- 1 boinc boinc      4530 Apr 26 03:59 pilotlog.txt
[2024-04-26 03:59:25] -rw------- 1 boinc boinc   1023248 Apr 26 03:59 log.38204279._019936.job.log.1
[2024-04-26 03:59:25] -rw------- 1 boinc boinc       357 Apr 26 03:59 output.list
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc       620 Apr 26 03:59 runtime_log
[2024-04-26 03:59:25] -rw------- 1 boinc boinc   1351680 Apr 26 03:59 result.tar.gz
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc     11410 Apr 26 03:59 runtime_log.err
[2024-04-26 03:59:25] -rw------- 1 boinc boinc       655 Apr 26 03:59 2jELDmxgaI5nsSi4apGgGQJmABFKDmABFKDmRLXKDmenLKDmKlyySo.diag
[2024-04-26 03:59:25] -rw-r--r-- 1 boinc boinc     21280 Apr 26 03:59 stderr.txt
[2024-04-26 03:59:25] HITS file was successfully produced:
[2024-04-26 03:59:25] -rw------- 1 boinc boinc 175247851 Apr 26 03:58 shared/HITS.pool.root.1
[2024-04-26 03:59:25]  *** Contents of shared directory: ***
[2024-04-26 03:59:25] total 617080
[2024-04-26 03:59:25] -rw-r--r-- 2 boinc boinc 454780218 Apr 26 01:00 ATLAS.root_0
[2024-04-26 03:59:25] -rw-r--r-- 2 boinc boinc     17537 Apr 26 01:00 start_atlas.sh
[2024-04-26 03:59:25] -rw-r--r-- 2 boinc boinc    474798 Apr 26 01:00 input.tar.gz
[2024-04-26 03:59:25] -rw------- 1 boinc boinc 175247851 Apr 26 03:58 HITS.pool.root.1
[2024-04-26 03:59:25] -rw------- 1 boinc boinc   1351680 Apr 26 03:59 result.tar.gz
03:59:27 (290397): run_atlas exited; CPU time 39880.153444
03:59:27 (290397): called boinc_finish(0)

</stderr_txt>
]]>

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