Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:20:53 (566478): wrapper (7.7.26015): starting
14:20:53 (566478): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 14:20:53] Arguments: --nthreads 4
[2024-04-26 14:20:53] Threads: 4
[2024-04-26 14:20:53] Checking for CVMFS
[2024-04-26 14:20:53] No cvmfs_config command found, will try listing directly
[2024-04-26 14:20:53] CVMFS is ok
[2024-04-26 14:20:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 14:20:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 14:20:53] Further information can be found at the LHC@home message board.
[2024-04-26 14:20:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 14:20:53] Checking for apptainer binary...
[2024-04-26 14:20:53] which: no apptainer in ((null))
[2024-04-26 14:20:53] apptainer is not installed, using version from CVMFS
[2024-04-26 14:20:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 14:20:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-04-26 14:20:54] apptainer works
[2024-04-26 14:20:54] Set ATHENA_PROC_NUMBER=4
[2024-04-26 14:20:54] Set ATHENA_CORE_NUMBER=4
[2024-04-26 14:20:54] Starting ATLAS job with PandaID=6182020967
[2024-04-26 14:20:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 18:38:57]  *** The last 200 lines of the pilot log: ***
[2024-04-26 18:38:57]  filetype=log
[2024-04-26 18:38:57]  guid=371fe8f8-21e8-4ba9-ab3c-fca7336cf854
[2024-04-26 18:38:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 18:38:57]  is_tar=False
[2024-04-26 18:38:57]  lfn=log.38204311._000583.job.log.tgz.1
[2024-04-26 18:38:57]  mtime=0
[2024-04-26 18:38:57]  protocol_id=None
[2024-04-26 18:38:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 18:38:57]  replicas=None
[2024-04-26 18:38:57]  scope=mc23_13p6TeV
[2024-04-26 18:38:57]  status=None
[2024-04-26 18:38:57]  status_code=0
[2024-04-26 18:38:57]  storage_token=
[2024-04-26 18:38:57]  surl=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182020967/log.38204311._000583.job.log.tgz.1
[2024-04-26 18:38:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/74/log.38204311._000583.job.log.tgz.1
[2024-04-26 18:38:57]  workdir=None
[2024-04-26 18:38:57] ]
[2024-04-26 18:38:57] 2024-04-26 16:38:27,897 | INFO     | transferring file log.38204311._000583.job.log.tgz.1 from /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182020967/log.38204311._000583.job.log.tgz.1 to /scratch/b
[2024-04-26 18:38:57] 2024-04-26 16:38:27,897 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182020967/log.38204311._000583.job.log.tgz.1 /scratch/boinc/var/slot32/slots/0/lo
[2024-04-26 18:38:57] 2024-04-26 16:38:27,914 | INFO     | adding to output.list: log.38204311._000583.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/74/log.38204311._000583.job.log.tg
[2024-04-26 18:38:57] 2024-04-26 16:38:27,915 | INFO     | summary of transferred files:
[2024-04-26 18:38:57] 2024-04-26 16:38:27,915 | INFO     |  -- lfn=log.38204311._000583.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 18:38:57] 2024-04-26 16:38:27,915 | INFO     | stage-out finished correctly
[2024-04-26 18:38:57] 2024-04-26 16:38:28,534 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 18:38:57] 2024-04-26 16:38:28,638 | INFO     | monitor loop #1176: job 0:6182020967 is in state 'finished'
[2024-04-26 18:38:57] 2024-04-26 16:38:28,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 18:38:57] 2024-04-26 16:38:29,457 | INFO     | job 6182020967 has state=finished
[2024-04-26 18:38:57] 2024-04-26 16:38:29,458 | INFO     | preparing for final server update for job 6182020967 in state='finished'
[2024-04-26 18:38:57] 2024-04-26 16:38:29,458 | INFO     | this job has now completed (state=finished)
[2024-04-26 18:38:57] 2024-04-26 16:38:29,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 18:38:57] 2024-04-26 16:38:29,459 | INFO     | job 6182020967 has finished - writing final server update
[2024-04-26 18:38:57] 2024-04-26 16:38:29,459 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4090184/.job.ad'
[2024-04-26 18:38:57] 2024-04-26 16:38:29,459 | INFO     | total number of processed events: 400 (read)
[2024-04-26 18:38:57] 2024-04-26 16:38:29,462 | INFO     | executing command: lscpu
[2024-04-26 18:38:57] 2024-04-26 16:38:29,490 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-26 18:38:57] 2024-04-26 16:38:29,491 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 18:38:57] 2024-04-26 16:38:29,514 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 18:38:57] 2024-04-26 16:38:31,148 | INFO     | monitor loop #1177: job 0:6182020967 is in state 'finished'
[2024-04-26 18:38:57] 2024-04-26 16:38:31,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 18:38:57] 2024-04-26 16:38:33,652 | INFO     | monitor loop #1178: job 0:6182020967 is in state 'finished'
[2024-04-26 18:38:57] 2024-04-26 16:38:33,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 18:38:57] 2024-04-26 16:38:36,154 | INFO     | monitor loop #1179: job 0:6182020967 is in state 'finished'
[2024-04-26 18:38:57] 2024-04-26 16:38:36,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,297 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 18:38:57] 2024-04-26 16:38:37,297 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6182020967/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,298 | INFO     | extracted standard info from prmon json
[2024-04-26 18:38:57] 2024-04-26 16:38:37,298 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 18:38:57] 2024-04-26 16:38:37,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 18:38:57] 2024-04-26 16:38:37,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 18:38:57] 2024-04-26 16:38:37,301 | INFO     | fitting pss+swap vs Time
[2024-04-26 18:38:57] 2024-04-26 16:38:37,304 | INFO     | current chi2=3.9157631179343486 (change=-0.05402455642512896 %)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,304 | INFO     | right removable region: 247
[2024-04-26 18:38:57] 2024-04-26 16:38:37,305 | INFO     | current chi2=1.5048990805188491 (change=61.547416168370226 %)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,306 | INFO     | current chi2=0.0963136846721866 (change=93.59999046321563 %)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,308 | INFO     | current chi2=0.028251918057794905 (change=70.66676645800317 %)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,309 | INFO     | current chi2=0.026963558080123993 (change=4.56025667013233 %)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,309 | INFO     | left removable region: 40
[2024-04-26 18:38:57] 2024-04-26 16:38:37,310 | INFO     | current memory leak: -1.35 B/s (using 207 data points, chi2=0.01)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,310 | INFO     | ..............................
[2024-04-26 18:38:57] 2024-04-26 16:38:37,310 | INFO     | . Timing measurements:
[2024-04-26 18:38:57] 2024-04-26 16:38:37,310 | INFO     | . get job = 0 s
[2024-04-26 18:38:57] 2024-04-26 16:38:37,310 | INFO     | . initial setup = 1 s
[2024-04-26 18:38:57] 2024-04-26 16:38:37,310 | INFO     | . payload setup = 5 s
[2024-04-26 18:38:57] 2024-04-26 16:38:37,310 | INFO     | . stage-in = 0 s
[2024-04-26 18:38:57] 2024-04-26 16:38:37,311 | INFO     | . payload execution = 15420 s
[2024-04-26 18:38:57] 2024-04-26 16:38:37,311 | INFO     | . stage-out = 0 s
[2024-04-26 18:38:57] 2024-04-26 16:38:37,311 | INFO     | . log creation = 0 s
[2024-04-26 18:38:57] 2024-04-26 16:38:37,311 | INFO     | ..............................
[2024-04-26 18:38:57] 2024-04-26 16:38:37,367 | INFO     | 
[2024-04-26 18:38:57] 2024-04-26 16:38:37,367 | INFO     | job summary report
[2024-04-26 18:38:57] 2024-04-26 16:38:37,367 | INFO     | --------------------------------------------------
[2024-04-26 18:38:57] 2024-04-26 16:38:37,367 | INFO     | PanDA job id: 6182020967
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | task id: 38204311
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | errors: (none)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | pilot state: finished 
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | transexitcode: 0
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | exeerrorcode: 0
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | exeerrordiag: 
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | exitcode: 0
[2024-04-26 18:38:57] 2024-04-26 16:38:37,368 | INFO     | exitmsg: OK
[2024-04-26 18:38:57] 2024-04-26 16:38:37,369 | INFO     | cpuconsumptiontime: 58488 s
[2024-04-26 18:38:57] 2024-04-26 16:38:37,369 | INFO     | nevents: 400
[2024-04-26 18:38:57] 2024-04-26 16:38:37,369 | INFO     | neventsw: 0
[2024-04-26 18:38:57] 2024-04-26 16:38:37,369 | INFO     | pid: 588149
[2024-04-26 18:38:57] 2024-04-26 16:38:37,369 | INFO     | pgrp: 588149
[2024-04-26 18:38:57] 2024-04-26 16:38:37,369 | INFO     | corecount: 4
[2024-04-26 18:38:57] 2024-04-26 16:38:37,369 | INFO     | event service: False
[2024-04-26 18:38:57] 2024-04-26 16:38:37,369 | INFO     | sizes: {0: 2375610, 3: 2375816, 11: 2375844, 15429: 2406908, 15431: 2415890, 15432: 2415946, 15441: 2416244}
[2024-04-26 18:38:57] 2024-04-26 16:38:37,370 | INFO     | --------------------------------------------------
[2024-04-26 18:38:57] 2024-04-26 16:38:37,370 | INFO     | 
[2024-04-26 18:38:57] 2024-04-26 16:38:37,370 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-04-26 18:38:57] 2024-04-26 16:38:37,389 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,389 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,389 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,389 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 18:38:57] 2024-04-26 16:38:37,390 | INFO     | job 6182020967 has completed (purged errors)
[2024-04-26 18:38:57] 2024-04-26 16:38:37,391 | INFO     | overall cleanup function is called
[2024-04-26 18:38:57] 2024-04-26 16:38:38,397 | INFO     | --- collectZombieJob: --- 10, [588149]
[2024-04-26 18:38:57] 2024-04-26 16:38:38,397 | INFO     | zombie collector waiting for pid 588149
[2024-04-26 18:38:57] 2024-04-26 16:38:38,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 18:38:57] 2024-04-26 16:38:39,403 | INFO     | collected zombie processes
[2024-04-26 18:38:57] 2024-04-26 16:38:39,403 | INFO     | will now attempt to kill all subprocesses of pid=588149
[2024-04-26 18:38:57] 2024-04-26 16:38:39,514 | INFO     | process IDs to be killed: [588149] (in reverse order)
[2024-04-26 18:38:57] 2024-04-26 16:38:39,592 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 18:38:57] 2024-04-26 16:38:39,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 18:38:57] 2024-04-26 16:38:39,597 | INFO     | did not find any defunct processes belonging to 588149
[2024-04-26 18:38:57] 2024-04-26 16:38:39,600 | INFO     | did not find any defunct processes belonging to 588149
[2024-04-26 18:38:57] 2024-04-26 16:38:39,601 | INFO     | ready for new job
[2024-04-26 18:38:57] 2024-04-26 16:38:39,601 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 18:38:57] 2024-04-26 16:38:39,602 | INFO     | *************************************
[2024-04-26 18:38:57] 2024-04-26 16:38:39,602 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 18:38:57] 2024-04-26 16:38:39,602 | INFO     | *************************************
[2024-04-26 18:38:57] 2024-04-26 16:38:39,602 | INFO     | 
[2024-04-26 18:38:57] 2024-04-26 16:38:39,604 | INFO     | architecture information:
[2024-04-26 18:38:57] 2024-04-26 16:38:39,604 | INFO     | executing command: cat /etc/os-release
[2024-04-26 18:38:57] 2024-04-26 16:38:39,616 | INFO     | cat /etc/os-release:
[2024-04-26 18:38:57] NAME="CentOS Linux"
[2024-04-26 18:38:57] VERSION="7 (Core)"
[2024-04-26 18:38:57] ID="centos"
[2024-04-26 18:38:57] ID_LIKE="rhel fedora"
[2024-04-26 18:38:57] VERSION_ID="7"
[2024-04-26 18:38:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 18:38:57] ANSI_COLOR="0;31"
[2024-04-26 18:38:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 18:38:57] HOME_URL="https://www.centos.org/"
[2024-04-26 18:38:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 18:38:57] 
[2024-04-26 18:38:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 18:38:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 18:38:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 18:38:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 18:38:57] 
[2024-04-26 18:38:57] 2024-04-26 16:38:39,616 | INFO     | *************************************
[2024-04-26 18:38:57] 2024-04-26 16:38:40,119 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-04-26 18:38:57] 2024-04-26 16:38:40,135 | INFO     | sufficient remaining disk space (1638144147456 B)
[2024-04-26 18:38:57] 2024-04-26 16:38:40,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 18:38:57] 2024-04-26 16:38:40,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 18:38:57] 2024-04-26 16:38:40,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 18:38:57] 2024-04-26 16:38:40,136 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 18:38:57] 2024-04-26 16:38:40,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 18:38:57] 2024-04-26 16:38:40,136 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 18:38:57] 2024-04-26 16:38:40,136 | INFO     | aborting loop
[2024-04-26 18:38:57] 2024-04-26 16:38:40,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 18:38:57] 2024-04-26 16:38:40,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 18:38:57] 2024-04-26 16:38:40,577 | INFO     | all data control threads have been joined
[2024-04-26 18:38:57] 2024-04-26 16:38:40,647 | INFO     | all payload control threads have been joined
[2024-04-26 18:38:57] 2024-04-26 16:38:41,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 18:38:57] 2024-04-26 16:38:41,141 | INFO     | [job] retrieve thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:41,141 | INFO     | [job] job monitor thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:41,520 | INFO     | all job control threads have been joined
[2024-04-26 18:38:57] 2024-04-26 16:38:41,582 | INFO     | [data] control thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:41,642 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:41,651 | INFO     | [payload] control thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:42,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 18:38:57] 2024-04-26 16:38:42,383 | INFO     | [job] validate thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:42,428 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:42,466 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:42,478 | INFO     | [data] copytool_in thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:42,525 | INFO     | [job] control thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:42,688 | INFO     | [payload] failed_post thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:42,695 | INFO     | [payload] validate_post thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:43,047 | INFO     | [data] copytool_out thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:43,381 | INFO     | [job] queue monitor thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:44,141 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:50,275 | INFO     | job.realtimelogging is not enabled
[2024-04-26 18:38:57] 2024-04-26 16:38:51,281 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 18:38:57] 2024-04-26 16:38:51,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47704703194176)>', '<ExcThread(monitor, started 47705344706304)>']
[2024-04-26 18:38:57] 2024-04-26 16:38:52,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 18:38:57] 2024-04-26 16:38:52,192 | INFO     | [monitor] control thread has ended
[2024-04-26 18:38:57] 2024-04-26 16:38:56,505 | INFO     | all workflow threads have been joined
[2024-04-26 18:38:57] 2024-04-26 16:38:56,505 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 18:38:57] 2024-04-26 16:38:56,506 | INFO     | traces error code: 0
[2024-04-26 18:38:57] 2024-04-26 16:38:56,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 18:38:57] 2024-04-26 16:38:56,614 [wrapper] ==== pilot stdout END ====
[2024-04-26 18:38:57] 2024-04-26 16:38:56,632 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 18:38:57] 2024-04-26 16:38:56,634 [wrapper] pilotpid: 570975
[2024-04-26 18:38:57] 2024-04-26 16:38:56,636 [wrapper] Pilot exit status: 0
[2024-04-26 18:38:57] 2024-04-26 16:38:56,689 [wrapper] pandaids: 6182020967
[2024-04-26 18:38:57] 2024-04-26 16:38:56,755 [wrapper] cleanup: SIGTERM to supervisor_pilot 1067256 570976
[2024-04-26 18:38:57] 2024-04-26 16:38:56,781 [wrapper] Test setup, not cleaning
[2024-04-26 18:38:57] 2024-04-26 16:38:56,803 [wrapper] ==== wrapper stdout END ====
[2024-04-26 18:38:57] 2024-04-26 16:38:56,806 [wrapper] ==== wrapper stderr END ====
[2024-04-26 18:38:57] 2024-04-26 16:38:56,824 [wrapper] apfmon messages muted
[2024-04-26 18:38:57]  *** Error codes and diagnostics ***
[2024-04-26 18:38:57]     "exeErrorCode": 0,
[2024-04-26 18:38:57]     "exeErrorDiag": "",
[2024-04-26 18:38:57]     "pilotErrorCode": 0,
[2024-04-26 18:38:57]     "pilotErrorDiag": "",
[2024-04-26 18:38:57]  *** Listing of results directory ***
[2024-04-26 18:38:57] total 621068
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc    462745 Apr 21 08:26 pilot3.tar.gz
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc      6720 Apr 21 08:32 queuedata.json
[2024-04-26 18:38:57] -rwx------ 1 boinc boinc     32211 Apr 21 08:32 runpilot2-wrapper.sh
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc       100 Apr 26 14:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 18:38:57] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 14:20 run_atlas
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc       105 Apr 26 14:20 job.xml
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc      6457 Apr 26 14:20 init_data.xml
[2024-04-26 18:38:57] -rw-r--r-- 2 boinc boinc 451437250 Apr 26 14:20 EVNT.38204309._000045.pool.root.1
[2024-04-26 18:38:57] -rw-r--r-- 2 boinc boinc     17537 Apr 26 14:20 start_atlas.sh
[2024-04-26 18:38:57] drwxrwx--x 2 boinc boinc      4096 Apr 26 14:20 shared
[2024-04-26 18:38:57] -rw-r--r-- 2 boinc boinc    474802 Apr 26 14:20 input.tar.gz
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc         0 Apr 26 14:20 boinc_lockfile
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc      2604 Apr 26 14:20 pandaJob.out
[2024-04-26 18:38:57] -rw------- 1 boinc boinc       424 Apr 26 14:20 setup.sh.local
[2024-04-26 18:38:57] -rw------- 1 boinc boinc    997811 Apr 26 14:21 agis_schedconf.cvmfs.json
[2024-04-26 18:38:57] -rw------- 1 boinc boinc   1315307 Apr 26 14:21 cric_ddmendpoints.json
[2024-04-26 18:38:57] drwx------ 4 boinc boinc      4096 Apr 26 14:21 pilot3
[2024-04-26 18:38:57] -rw------- 1 boinc boinc        95 Apr 26 18:37 pilot_heartbeat.json
[2024-04-26 18:38:57] -rw------- 1 boinc boinc 177497588 Apr 26 18:37 HITS.38204311._000583.pool.root.1
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc       532 Apr 26 18:38 boinc_task_state.xml
[2024-04-26 18:38:57] -rw------- 1 boinc boinc      1063 Apr 26 18:38 memory_monitor_summary.json
[2024-04-26 18:38:57] -rw------- 1 boinc boinc         0 Apr 26 18:38 agis_ddmendpoints.agis.ALL.json
[2024-04-26 18:38:57] -rw------- 1 boinc boinc    335952 Apr 26 18:38 log.38204311._000583.job.log.tgz.1
[2024-04-26 18:38:57] -rw------- 1 boinc boinc      7753 Apr 26 18:38 heartbeat.json
[2024-04-26 18:38:57] -rw------- 1 boinc boinc      4417 Apr 26 18:38 pilotlog.txt
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc        28 Apr 26 18:38 wrapper_checkpoint.txt
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc      8192 Apr 26 18:38 boinc_mmap_file
[2024-04-26 18:38:57] -rw------- 1 boinc boinc   1437685 Apr 26 18:38 log.38204311._000583.job.log.1
[2024-04-26 18:38:57] -rw------- 1 boinc boinc       357 Apr 26 18:38 output.list
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc       620 Apr 26 18:38 runtime_log
[2024-04-26 18:38:57] -rw------- 1 boinc boinc   1792000 Apr 26 18:38 result.tar.gz
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc     11410 Apr 26 18:38 runtime_log.err
[2024-04-26 18:38:57] -rw------- 1 boinc boinc       659 Apr 26 18:38 LecMDm3vfI5n9Rq4apoT9bVoABFKDmABFKDmtztZDm4CKKDmd3fQOo.diag
[2024-04-26 18:38:57] -rw-r--r-- 1 boinc boinc     21399 Apr 26 18:38 stderr.txt
[2024-04-26 18:38:57] HITS file was successfully produced:
[2024-04-26 18:38:57] -rw------- 1 boinc boinc 177497588 Apr 26 18:37 shared/HITS.pool.root.1
[2024-04-26 18:38:57]  *** Contents of shared directory: ***
[2024-04-26 18:38:57] total 616444
[2024-04-26 18:38:57] -rw-r--r-- 2 boinc boinc 451437250 Apr 26 14:20 ATLAS.root_0
[2024-04-26 18:38:57] -rw-r--r-- 2 boinc boinc     17537 Apr 26 14:20 start_atlas.sh
[2024-04-26 18:38:57] -rw-r--r-- 2 boinc boinc    474802 Apr 26 14:20 input.tar.gz
[2024-04-26 18:38:57] -rw------- 1 boinc boinc 177497588 Apr 26 18:37 HITS.pool.root.1
[2024-04-26 18:38:57] -rw------- 1 boinc boinc   1792000 Apr 26 18:38 result.tar.gz
18:38:58 (566478): run_atlas exited; CPU time 58241.662101
18:38:58 (566478): called boinc_finish(0)

</stderr_txt>
]]>

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