Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:50:14 (19757): wrapper (7.7.26015): starting
09:50:14 (19757): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 09:50:14] Arguments: --nthreads 4
[2024-04-26 09:50:14] Threads: 4
[2024-04-26 09:50:14] Checking for CVMFS
[2024-04-26 09:50:14] No cvmfs_config command found, will try listing directly
[2024-04-26 09:50:14] CVMFS is ok
[2024-04-26 09:50:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 09:50:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 09:50:14] Further information can be found at the LHC@home message board.
[2024-04-26 09:50:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 09:50:14] Checking for apptainer binary...
[2024-04-26 09:50:14] which: no apptainer in ((null))
[2024-04-26 09:50:14] apptainer is not installed, using version from CVMFS
[2024-04-26 09:50:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 09:50:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-04-26 09:50:15] apptainer works
[2024-04-26 09:50:15] Set ATHENA_PROC_NUMBER=4
[2024-04-26 09:50:15] Set ATHENA_CORE_NUMBER=4
[2024-04-26 09:50:15] Starting ATLAS job with PandaID=6181817378
[2024-04-26 09:50:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 14:20:42]  *** The last 200 lines of the pilot log: ***
[2024-04-26 14:20:42]  filesize=364641
[2024-04-26 14:20:42]  filetype=log
[2024-04-26 14:20:42]  guid=53eaa55b-75f2-4598-9319-955ba4ab4b03
[2024-04-26 14:20:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 14:20:42]  is_tar=False
[2024-04-26 14:20:42]  lfn=log.38204343._008402.job.log.tgz.1
[2024-04-26 14:20:42]  mtime=0
[2024-04-26 14:20:42]  protocol_id=None
[2024-04-26 14:20:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 14:20:42]  replicas=None
[2024-04-26 14:20:42]  scope=mc23_13p6TeV
[2024-04-26 14:20:42]  status=None
[2024-04-26 14:20:42]  status_code=0
[2024-04-26 14:20:42]  storage_token=
[2024-04-26 14:20:42]  surl=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6181817378/log.38204343._008402.job.log.tgz.1
[2024-04-26 14:20:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/8e/log.38204343._008402.job.log.tgz.1
[2024-04-26 14:20:42]  workdir=None
[2024-04-26 14:20:42] ]
[2024-04-26 14:20:42] 2024-04-26 12:20:22,582 | INFO     | transferring file log.38204343._008402.job.log.tgz.1 from /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6181817378/log.38204343._008402.job.log.tgz.1 to /scratch/b
[2024-04-26 14:20:42] 2024-04-26 12:20:22,582 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6181817378/log.38204343._008402.job.log.tgz.1 /scratch/boinc/var/slot32/slots/0/lo
[2024-04-26 14:20:42] 2024-04-26 12:20:22,595 | INFO     | adding to output.list: log.38204343._008402.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/8e/log.38204343._008402.job.log.tg
[2024-04-26 14:20:42] 2024-04-26 12:20:22,596 | INFO     | summary of transferred files:
[2024-04-26 14:20:42] 2024-04-26 12:20:22,596 | INFO     |  -- lfn=log.38204343._008402.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 14:20:42] 2024-04-26 12:20:22,596 | INFO     | stage-out finished correctly
[2024-04-26 14:20:42] 2024-04-26 12:20:24,003 | INFO     | monitor loop #1218: job 0:6181817378 is in state 'finished'
[2024-04-26 14:20:42] 2024-04-26 12:20:24,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 14:20:42] 2024-04-26 12:20:25,118 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 14:20:42] 2024-04-26 12:20:25,592 | INFO     | job 6181817378 has state=finished
[2024-04-26 14:20:42] 2024-04-26 12:20:25,592 | INFO     | preparing for final server update for job 6181817378 in state='finished'
[2024-04-26 14:20:42] 2024-04-26 12:20:25,592 | INFO     | this job has now completed (state=finished)
[2024-04-26 14:20:42] 2024-04-26 12:20:25,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 14:20:42] 2024-04-26 12:20:25,593 | INFO     | job 6181817378 has finished - writing final server update
[2024-04-26 14:20:42] 2024-04-26 12:20:25,593 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4090184/.job.ad'
[2024-04-26 14:20:42] 2024-04-26 12:20:25,593 | INFO     | total number of processed events: 400 (read)
[2024-04-26 14:20:42] 2024-04-26 12:20:25,595 | INFO     | executing command: lscpu
[2024-04-26 14:20:42] 2024-04-26 12:20:25,632 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-26 14:20:42] 2024-04-26 12:20:25,633 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 14:20:42] 2024-04-26 12:20:25,655 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 14:20:42] 2024-04-26 12:20:26,507 | INFO     | monitor loop #1219: job 0:6181817378 is in state 'finished'
[2024-04-26 14:20:42] 2024-04-26 12:20:26,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,380 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 14:20:42] 2024-04-26 12:20:28,380 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6181817378/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,381 | INFO     | extracted standard info from prmon json
[2024-04-26 14:20:42] 2024-04-26 12:20:28,381 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 14:20:42] 2024-04-26 12:20:28,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 14:20:42] 2024-04-26 12:20:28,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 14:20:42] 2024-04-26 12:20:28,384 | INFO     | fitting pss+swap vs Time
[2024-04-26 14:20:42] 2024-04-26 12:20:28,387 | INFO     | current chi2=3.8461293926735003 (change=-0.017921091972754488 %)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,387 | INFO     | right removable region: 258
[2024-04-26 14:20:42] 2024-04-26 12:20:28,388 | INFO     | current chi2=1.3881540035730626 (change=63.90129831374011 %)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,389 | INFO     | current chi2=0.0726399686004285 (change=94.76715347047549 %)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,391 | INFO     | current chi2=0.011722082027835043 (change=83.86276556324682 %)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,392 | INFO     | current chi2=0.007673978911536008 (change=34.533994103491885 %)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,393 | INFO     | current chi2=0.0023009494924041618 (change=70.01621298508874 %)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,394 | INFO     | current chi2=0.00025122798896260855 (change=89.08155134252375 %)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,395 | INFO     | current chi2=0.0002437636939945382 (change=2.9711239575226265 %)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,396 | INFO     | left removable region: 70
[2024-04-26 14:20:42] 2024-04-26 12:20:28,396 | INFO     | current memory leak: 1.83 B/s (using 188 data points, chi2=0.00)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | ..............................
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | . Timing measurements:
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | . get job = 0 s
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | . initial setup = 1 s
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | . payload setup = 19 s
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | . stage-in = 0 s
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | . payload execution = 16120 s
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | . stage-out = 0 s
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | . log creation = 0 s
[2024-04-26 14:20:42] 2024-04-26 12:20:28,397 | INFO     | ..............................
[2024-04-26 14:20:42] 2024-04-26 12:20:28,453 | INFO     | 
[2024-04-26 14:20:42] 2024-04-26 12:20:28,453 | INFO     | job summary report
[2024-04-26 14:20:42] 2024-04-26 12:20:28,453 | INFO     | --------------------------------------------------
[2024-04-26 14:20:42] 2024-04-26 12:20:28,454 | INFO     | PanDA job id: 6181817378
[2024-04-26 14:20:42] 2024-04-26 12:20:28,454 | INFO     | task id: 38204343
[2024-04-26 14:20:42] 2024-04-26 12:20:28,454 | INFO     | errors: (none)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,454 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 14:20:42] 2024-04-26 12:20:28,454 | INFO     | pilot state: finished 
[2024-04-26 14:20:42] 2024-04-26 12:20:28,454 | INFO     | transexitcode: 0
[2024-04-26 14:20:42] 2024-04-26 12:20:28,454 | INFO     | exeerrorcode: 0
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | exeerrordiag: 
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | exitcode: 0
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | exitmsg: OK
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | cpuconsumptiontime: 60457 s
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | nevents: 400
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | neventsw: 0
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | pid: 31736
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | pgrp: 31736
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | corecount: 4
[2024-04-26 14:20:42] 2024-04-26 12:20:28,455 | INFO     | event service: False
[2024-04-26 14:20:42] 2024-04-26 12:20:28,456 | INFO     | sizes: {0: 2375610, 1: 2375610, 12: 2375638, 16: 2375872, 22: 2375900, 16144: 2407438, 16146: 2416420, 16148: 2416476, 16152: 2416646}
[2024-04-26 14:20:42] 2024-04-26 12:20:28,456 | INFO     | --------------------------------------------------
[2024-04-26 14:20:42] 2024-04-26 12:20:28,456 | INFO     | 
[2024-04-26 14:20:42] 2024-04-26 12:20:28,456 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-04-26 14:20:42] 2024-04-26 12:20:28,473 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 14:20:42] 2024-04-26 12:20:28,475 | INFO     | job 6181817378 has completed (purged errors)
[2024-04-26 14:20:42] 2024-04-26 12:20:28,476 | INFO     | overall cleanup function is called
[2024-04-26 14:20:42] 2024-04-26 12:20:29,482 | INFO     | --- collectZombieJob: --- 10, [31736]
[2024-04-26 14:20:42] 2024-04-26 12:20:29,482 | INFO     | zombie collector waiting for pid 31736
[2024-04-26 14:20:42] 2024-04-26 12:20:29,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 14:20:42] 2024-04-26 12:20:30,487 | INFO     | collected zombie processes
[2024-04-26 14:20:42] 2024-04-26 12:20:30,487 | INFO     | will now attempt to kill all subprocesses of pid=31736
[2024-04-26 14:20:42] 2024-04-26 12:20:30,586 | INFO     | process IDs to be killed: [31736] (in reverse order)
[2024-04-26 14:20:42] 2024-04-26 12:20:30,647 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 14:20:42] 2024-04-26 12:20:30,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 14:20:42] 2024-04-26 12:20:30,651 | INFO     | did not find any defunct processes belonging to 31736
[2024-04-26 14:20:42] 2024-04-26 12:20:30,654 | INFO     | did not find any defunct processes belonging to 31736
[2024-04-26 14:20:42] 2024-04-26 12:20:30,655 | INFO     | ready for new job
[2024-04-26 14:20:42] 2024-04-26 12:20:30,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 14:20:42] 2024-04-26 12:20:30,656 | INFO     | *************************************
[2024-04-26 14:20:42] 2024-04-26 12:20:30,656 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 14:20:42] 2024-04-26 12:20:30,656 | INFO     | *************************************
[2024-04-26 14:20:42] 2024-04-26 12:20:30,656 | INFO     | 
[2024-04-26 14:20:42] 2024-04-26 12:20:30,658 | INFO     | architecture information:
[2024-04-26 14:20:42] 2024-04-26 12:20:30,658 | INFO     | executing command: cat /etc/os-release
[2024-04-26 14:20:42] 2024-04-26 12:20:30,668 | INFO     | cat /etc/os-release:
[2024-04-26 14:20:42] NAME="CentOS Linux"
[2024-04-26 14:20:42] VERSION="7 (Core)"
[2024-04-26 14:20:42] ID="centos"
[2024-04-26 14:20:42] ID_LIKE="rhel fedora"
[2024-04-26 14:20:42] VERSION_ID="7"
[2024-04-26 14:20:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 14:20:42] ANSI_COLOR="0;31"
[2024-04-26 14:20:42] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 14:20:42] HOME_URL="https://www.centos.org/"
[2024-04-26 14:20:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 14:20:42] 
[2024-04-26 14:20:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 14:20:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 14:20:42] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 14:20:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 14:20:42] 
[2024-04-26 14:20:42] 2024-04-26 12:20:30,668 | INFO     | *************************************
[2024-04-26 14:20:42] 2024-04-26 12:20:31,170 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-04-26 14:20:42] 2024-04-26 12:20:31,185 | INFO     | sufficient remaining disk space (1642299654144 B)
[2024-04-26 14:20:42] 2024-04-26 12:20:31,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 14:20:42] 2024-04-26 12:20:31,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 14:20:42] 2024-04-26 12:20:31,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 14:20:42] 2024-04-26 12:20:31,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 14:20:42] 2024-04-26 12:20:31,371 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 14:20:42] 2024-04-26 12:20:31,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 14:20:42] 2024-04-26 12:20:31,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 14:20:42] 2024-04-26 12:20:31,515 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-26 14:20:42] 2024-04-26 12:20:31,515 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-26 14:20:42] 2024-04-26 12:20:31,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 14:20:42] 2024-04-26 12:20:31,516 | INFO     | will abort loop
[2024-04-26 14:20:42] 2024-04-26 12:20:31,672 | INFO     | all data control threads have been joined
[2024-04-26 14:20:42] 2024-04-26 12:20:32,107 | INFO     | all payload control threads have been joined
[2024-04-26 14:20:42] 2024-04-26 12:20:32,191 | INFO     | [job] retrieve thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:32,326 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:32,342 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:32,520 | INFO     | [job] job monitor thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:32,678 | INFO     | [data] control thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:32,761 | INFO     | [payload] validate_post thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:32,811 | INFO     | all job control threads have been joined
[2024-04-26 14:20:42] 2024-04-26 12:20:33,030 | INFO     | [payload] failed_post thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:33,065 | INFO     | [data] copytool_in thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:33,112 | INFO     | [payload] control thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:33,191 | INFO     | [data] copytool_out thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:33,231 | INFO     | [job] validate thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:33,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 14:20:42] 2024-04-26 12:20:33,519 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:33,565 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:33,812 | INFO     | [job] control thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:34,463 | INFO     | [job] queue monitor thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:35,193 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 14:20:42] 2024-04-26 12:20:36,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47478184715328)>', '<ExcThread(monitor, started 47478355949312)>']
[2024-04-26 14:20:42] 2024-04-26 12:20:36,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 14:20:42] 2024-04-26 12:20:36,397 | INFO     | [monitor] control thread has ended
[2024-04-26 14:20:42] 2024-04-26 12:20:41,281 | INFO     | all workflow threads have been joined
[2024-04-26 14:20:42] 2024-04-26 12:20:41,281 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 14:20:42] 2024-04-26 12:20:41,282 | INFO     | traces error code: 0
[2024-04-26 14:20:42] 2024-04-26 12:20:41,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 14:20:42] 2024-04-26 12:20:41,349 [wrapper] ==== pilot stdout END ====
[2024-04-26 14:20:42] 2024-04-26 12:20:41,351 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 14:20:42] 2024-04-26 12:20:41,353 [wrapper] pilotpid: 24531
[2024-04-26 14:20:42] 2024-04-26 12:20:41,354 [wrapper] Pilot exit status: 0
[2024-04-26 14:20:42] 2024-04-26 12:20:41,365 [wrapper] pandaids: 6181817378
[2024-04-26 14:20:42] 2024-04-26 12:20:41,402 [wrapper] cleanup: SIGTERM to supervisor_pilot  566267 24532
[2024-04-26 14:20:42] 2024-04-26 12:20:41,404 [wrapper] Test setup, not cleaning
[2024-04-26 14:20:42] 2024-04-26 12:20:41,405 [wrapper] ==== wrapper stdout END ====
[2024-04-26 14:20:42] 2024-04-26 12:20:41,407 [wrapper] ==== wrapper stderr END ====
[2024-04-26 14:20:42] 2024-04-26 12:20:41,411 [wrapper] apfmon messages muted
[2024-04-26 14:20:42]  *** Error codes and diagnostics ***
[2024-04-26 14:20:42]     "exeErrorCode": 0,
[2024-04-26 14:20:42]     "exeErrorDiag": "",
[2024-04-26 14:20:42]     "pilotErrorCode": 0,
[2024-04-26 14:20:42]     "pilotErrorDiag": "",
[2024-04-26 14:20:42]  *** Listing of results directory ***
[2024-04-26 14:20:42] total 608560
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc    462745 Apr 21 03:23 pilot3.tar.gz
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc      6720 Apr 21 04:04 queuedata.json
[2024-04-26 14:20:42] -rwx------ 1 boinc boinc     32211 Apr 21 04:06 runpilot2-wrapper.sh
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc       100 Apr 26 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 14:20:42] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 09:50 run_atlas
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc       105 Apr 26 09:50 job.xml
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc      6457 Apr 26 09:50 init_data.xml
[2024-04-26 14:20:42] -rw-r--r-- 2 boinc boinc 447316277 Apr 26 09:50 EVNT.38204341._000351.pool.root.1
[2024-04-26 14:20:42] -rw-r--r-- 2 boinc boinc     17537 Apr 26 09:50 start_atlas.sh
[2024-04-26 14:20:42] drwxrwx--x 2 boinc boinc      4096 Apr 26 09:50 shared
[2024-04-26 14:20:42] -rw-r--r-- 2 boinc boinc    474799 Apr 26 09:50 input.tar.gz
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc         0 Apr 26 09:50 boinc_lockfile
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc      2601 Apr 26 09:50 pandaJob.out
[2024-04-26 14:20:42] -rw------- 1 boinc boinc       424 Apr 26 09:50 setup.sh.local
[2024-04-26 14:20:42] -rw------- 1 boinc boinc    993582 Apr 26 09:50 agis_schedconf.cvmfs.json
[2024-04-26 14:20:42] -rw------- 1 boinc boinc   1315307 Apr 26 09:50 cric_ddmendpoints.json
[2024-04-26 14:20:42] drwx------ 4 boinc boinc      4096 Apr 26 09:50 pilot3
[2024-04-26 14:20:42] -rw------- 1 boinc boinc        95 Apr 26 14:19 pilot_heartbeat.json
[2024-04-26 14:20:42] -rw------- 1 boinc boinc 168672839 Apr 26 14:19 HITS.38204343._008402.pool.root.1
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc       532 Apr 26 14:20 boinc_task_state.xml
[2024-04-26 14:20:42] -rw------- 1 boinc boinc      1049 Apr 26 14:20 memory_monitor_summary.json
[2024-04-26 14:20:42] -rw------- 1 boinc boinc         0 Apr 26 14:20 agis_ddmendpoints.agis.ALL.json
[2024-04-26 14:20:42] -rw------- 1 boinc boinc    364641 Apr 26 14:20 log.38204343._008402.job.log.tgz.1
[2024-04-26 14:20:42] -rw------- 1 boinc boinc      7755 Apr 26 14:20 heartbeat.json
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc      8192 Apr 26 14:20 boinc_mmap_file
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc        28 Apr 26 14:20 wrapper_checkpoint.txt
[2024-04-26 14:20:42] -rw------- 1 boinc boinc      4408 Apr 26 14:20 pilotlog.txt
[2024-04-26 14:20:42] -rw------- 1 boinc boinc   1482029 Apr 26 14:20 log.38204343._008402.job.log.1
[2024-04-26 14:20:42] -rw------- 1 boinc boinc       357 Apr 26 14:20 output.list
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc       620 Apr 26 14:20 runtime_log
[2024-04-26 14:20:42] -rw------- 1 boinc boinc   1863680 Apr 26 14:20 result.tar.gz
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc     11410 Apr 26 14:20 runtime_log.err
[2024-04-26 14:20:42] -rw------- 1 boinc boinc       658 Apr 26 14:20 DzsLDmAmbI5nsSi4apGgGQJmABFKDmABFKDmRLXKDmAtLKDmU7Yekn.diag
[2024-04-26 14:20:42] -rw-r--r-- 1 boinc boinc     21300 Apr 26 14:20 stderr.txt
[2024-04-26 14:20:42] HITS file was successfully produced:
[2024-04-26 14:20:42] -rw------- 1 boinc boinc 168672839 Apr 26 14:19 shared/HITS.pool.root.1
[2024-04-26 14:20:42]  *** Contents of shared directory: ***
[2024-04-26 14:20:42] total 603868
[2024-04-26 14:20:42] -rw-r--r-- 2 boinc boinc 447316277 Apr 26 09:50 ATLAS.root_0
[2024-04-26 14:20:42] -rw-r--r-- 2 boinc boinc     17537 Apr 26 09:50 start_atlas.sh
[2024-04-26 14:20:42] -rw-r--r-- 2 boinc boinc    474799 Apr 26 09:50 input.tar.gz
[2024-04-26 14:20:42] -rw------- 1 boinc boinc 168672839 Apr 26 14:19 HITS.pool.root.1
[2024-04-26 14:20:42] -rw------- 1 boinc boinc   1863680 Apr 26 14:20 result.tar.gz
14:20:43 (19757): run_atlas exited; CPU time 60181.442864
14:20:43 (19757): called boinc_finish(0)

</stderr_txt>
]]>

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