Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:37:34 (489945): wrapper (7.7.26015): starting
04:37:34 (489945): wrapper: running run_atlas (--nthreads 4)
[2024-04-28 04:37:34] Arguments: --nthreads 4
[2024-04-28 04:37:34] Threads: 4
[2024-04-28 04:37:34] Checking for CVMFS
[2024-04-28 04:37:34] No cvmfs_config command found, will try listing directly
[2024-04-28 04:37:34] CVMFS is ok
[2024-04-28 04:37:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-28 04:37:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-28 04:37:34] Further information can be found at the LHC@home message board.
[2024-04-28 04:37:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-28 04:37:34] Checking for apptainer binary...
[2024-04-28 04:37:34] which: no apptainer in ((null))
[2024-04-28 04:37:34] apptainer is not installed, using version from CVMFS
[2024-04-28 04:37:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-28 04:37:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2024-04-28 04:37:35] apptainer works
[2024-04-28 04:37:35] Set ATHENA_PROC_NUMBER=4
[2024-04-28 04:37:35] Set ATHENA_CORE_NUMBER=4
[2024-04-28 04:37:35] Starting ATLAS job with PandaID=6181728944
[2024-04-28 04:37:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-28 08:47:14]  *** The last 200 lines of the pilot log: ***
[2024-04-28 08:47:14]  guid=508256a4-4935-4e54-9bed-2860f7646f34
[2024-04-28 08:47:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-28 08:47:14]  is_tar=False
[2024-04-28 08:47:14]  lfn=log.38204279._020070.job.log.tgz.1
[2024-04-28 08:47:14]  mtime=0
[2024-04-28 08:47:14]  protocol_id=None
[2024-04-28 08:47:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-28 08:47:14]  replicas=None
[2024-04-28 08:47:14]  scope=mc23_13p6TeV
[2024-04-28 08:47:14]  status=None
[2024-04-28 08:47:14]  status_code=0
[2024-04-28 08:47:14]  storage_token=
[2024-04-28 08:47:14]  surl=/scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6181728944/log.38204279._020070.job.log.tgz.1
[2024-04-28 08:47:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/6d/log.38204279._020070.job.log.tgz.1
[2024-04-28 08:47:14]  workdir=None
[2024-04-28 08:47:14] ]
[2024-04-28 08:47:14] 2024-04-28 06:46:47,914 | INFO     | transferring file log.38204279._020070.job.log.tgz.1 from /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6181728944/log.38204279._020070.job.log.tgz.1 to /scratch/b
[2024-04-28 08:47:14] 2024-04-28 06:46:47,915 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6181728944/log.38204279._020070.job.log.tgz.1 /scratch/boinc/var/slot20/slots/0/lo
[2024-04-28 08:47:14] 2024-04-28 06:46:47,930 | INFO     | adding to output.list: log.38204279._020070.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/6d/log.38204279._020070.job.log.tg
[2024-04-28 08:47:14] 2024-04-28 06:46:47,931 | INFO     | summary of transferred files:
[2024-04-28 08:47:14] 2024-04-28 06:46:47,931 | INFO     |  -- lfn=log.38204279._020070.job.log.tgz.1, status_code=0, status=transferred
[2024-04-28 08:47:14] 2024-04-28 06:46:47,931 | INFO     | stage-out finished correctly
[2024-04-28 08:47:14] 2024-04-28 06:46:48,939 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-28 08:47:14] 2024-04-28 06:46:49,296 | INFO     | job 6181728944 has state=finished
[2024-04-28 08:47:14] 2024-04-28 06:46:49,297 | INFO     | preparing for final server update for job 6181728944 in state='finished'
[2024-04-28 08:47:14] 2024-04-28 06:46:49,297 | INFO     | this job has now completed (state=finished)
[2024-04-28 08:47:14] 2024-04-28 06:46:49,298 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-28 08:47:14] 2024-04-28 06:46:49,298 | INFO     | job 6181728944 has finished - writing final server update
[2024-04-28 08:47:14] 2024-04-28 06:46:49,298 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2577208/.job.ad'
[2024-04-28 08:47:14] 2024-04-28 06:46:49,298 | INFO     | total number of processed events: 400 (read)
[2024-04-28 08:47:14] 2024-04-28 06:46:49,301 | INFO     | executing command: lscpu
[2024-04-28 08:47:14] 2024-04-28 06:46:49,324 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-28 08:47:14] 2024-04-28 06:46:49,324 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-28 08:47:14] 2024-04-28 06:46:49,347 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-28 08:47:14] 2024-04-28 06:46:49,898 | INFO     | monitor loop #1146: job 0:6181728944 is in state 'finished'
[2024-04-28 08:47:14] 2024-04-28 06:46:49,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,081 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-28 08:47:14] 2024-04-28 06:46:52,082 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6181728944/memory_monitor_summary.json (trf name=prmon)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,083 | INFO     | extracted standard info from prmon json
[2024-04-28 08:47:14] 2024-04-28 06:46:52,083 | INFO     | extracted standard memory fields from prmon json
[2024-04-28 08:47:14] 2024-04-28 06:46:52,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-28 08:47:14] 2024-04-28 06:46:52,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-28 08:47:14] 2024-04-28 06:46:52,086 | INFO     | fitting pss+swap vs Time
[2024-04-28 08:47:14] 2024-04-28 06:46:52,088 | INFO     | current chi2=3.4240345367001352 (change=-0.07285194109667072 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,088 | INFO     | right removable region: 239
[2024-04-28 08:47:14] 2024-04-28 06:46:52,089 | INFO     | current chi2=1.2152491267116003 (change=64.48241259676071 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,091 | INFO     | current chi2=0.12691470882338202 (change=89.55648631759922 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,092 | INFO     | current chi2=0.08654705280899672 (change=31.80691693550039 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,093 | INFO     | current chi2=0.05032253673332962 (change=41.855285535386244 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,094 | INFO     | current chi2=0.030551137675734998 (change=39.28935292425278 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,095 | INFO     | current chi2=0.01791211669083595 (change=41.370050173082404 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,096 | INFO     | current chi2=0.002028090118235233 (change=88.67755188713778 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,097 | INFO     | current chi2=3.9816871706785686e-05 (change=98.03673064876266 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,098 | INFO     | current chi2=3.661701004330472e-05 (change=8.036446677792712 %)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,098 | INFO     | left removable region: 90
[2024-04-28 08:47:14] 2024-04-28 06:46:52,098 | INFO     | current memory leak: 0.71 B/s (using 149 data points, chi2=0.00)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | ..............................
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | . Timing measurements:
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | . get job = 0 s
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | . initial setup = 1 s
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | . payload setup = 5 s
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | . stage-in = 0 s
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | . payload execution = 14918 s
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | . stage-out = 0 s
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | . log creation = 0 s
[2024-04-28 08:47:14] 2024-04-28 06:46:52,099 | INFO     | ..............................
[2024-04-28 08:47:14] 2024-04-28 06:46:52,157 | INFO     | 
[2024-04-28 08:47:14] 2024-04-28 06:46:52,157 | INFO     | job summary report
[2024-04-28 08:47:14] 2024-04-28 06:46:52,157 | INFO     | --------------------------------------------------
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | PanDA job id: 6181728944
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | task id: 38204279
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | errors: (none)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | pilot state: finished 
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | transexitcode: 0
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | exeerrorcode: 0
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | exeerrordiag: 
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | exitcode: 0
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | exitmsg: OK
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | cpuconsumptiontime: 56405 s
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | nevents: 400
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | neventsw: 0
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | pid: 501028
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | pgrp: 501028
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | corecount: 4
[2024-04-28 08:47:14] 2024-04-28 06:46:52,158 | INFO     | event service: False
[2024-04-28 08:47:14] 2024-04-28 06:46:52,159 | INFO     | sizes: {0: 2374732, 1: 2375667, 5: 2375873, 11: 2375929, 14927: 2406707, 14928: 2415689, 14929: 2415873, 14932: 2416043}
[2024-04-28 08:47:14] 2024-04-28 06:46:52,159 | INFO     | --------------------------------------------------
[2024-04-28 08:47:14] 2024-04-28 06:46:52,159 | INFO     | 
[2024-04-28 08:47:14] 2024-04-28 06:46:52,159 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-04-28 08:47:14] 2024-04-28 06:46:52,174 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,174 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,174 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,174 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,176 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-28 08:47:14] 2024-04-28 06:46:52,176 | INFO     | job 6181728944 has completed (purged errors)
[2024-04-28 08:47:14] 2024-04-28 06:46:52,176 | INFO     | overall cleanup function is called
[2024-04-28 08:47:14] 2024-04-28 06:46:53,182 | INFO     | --- collectZombieJob: --- 10, [501028]
[2024-04-28 08:47:14] 2024-04-28 06:46:53,182 | INFO     | zombie collector waiting for pid 501028
[2024-04-28 08:47:14] 2024-04-28 06:46:53,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-28 08:47:14] 2024-04-28 06:46:54,187 | INFO     | collected zombie processes
[2024-04-28 08:47:14] 2024-04-28 06:46:54,187 | INFO     | will now attempt to kill all subprocesses of pid=501028
[2024-04-28 08:47:14] 2024-04-28 06:46:54,282 | INFO     | process IDs to be killed: [501028] (in reverse order)
[2024-04-28 08:47:14] 2024-04-28 06:46:54,350 | WARNING  | found no corresponding commands to process id(s)
[2024-04-28 08:47:14] 2024-04-28 06:46:54,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-28 08:47:14] 2024-04-28 06:46:54,354 | INFO     | did not find any defunct processes belonging to 501028
[2024-04-28 08:47:14] 2024-04-28 06:46:54,357 | INFO     | did not find any defunct processes belonging to 501028
[2024-04-28 08:47:14] 2024-04-28 06:46:54,357 | INFO     | ready for new job
[2024-04-28 08:47:14] 2024-04-28 06:46:54,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-28 08:47:14] 2024-04-28 06:46:54,359 | INFO     | *************************************
[2024-04-28 08:47:14] 2024-04-28 06:46:54,359 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-28 08:47:14] 2024-04-28 06:46:54,359 | INFO     | *************************************
[2024-04-28 08:47:14] 2024-04-28 06:46:54,359 | INFO     | 
[2024-04-28 08:47:14] 2024-04-28 06:46:54,360 | INFO     | architecture information:
[2024-04-28 08:47:14] 2024-04-28 06:46:54,361 | INFO     | executing command: cat /etc/os-release
[2024-04-28 08:47:14] 2024-04-28 06:46:54,370 | INFO     | cat /etc/os-release:
[2024-04-28 08:47:14] NAME="CentOS Linux"
[2024-04-28 08:47:14] VERSION="7 (Core)"
[2024-04-28 08:47:14] ID="centos"
[2024-04-28 08:47:14] ID_LIKE="rhel fedora"
[2024-04-28 08:47:14] VERSION_ID="7"
[2024-04-28 08:47:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-28 08:47:14] ANSI_COLOR="0;31"
[2024-04-28 08:47:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-28 08:47:14] HOME_URL="https://www.centos.org/"
[2024-04-28 08:47:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-28 08:47:14] 
[2024-04-28 08:47:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-28 08:47:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-28 08:47:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-28 08:47:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-28 08:47:14] 
[2024-04-28 08:47:14] 2024-04-28 06:46:54,370 | INFO     | *************************************
[2024-04-28 08:47:14] 2024-04-28 06:46:54,873 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-04-28 08:47:14] 2024-04-28 06:46:54,888 | INFO     | sufficient remaining disk space (1627947794432 B)
[2024-04-28 08:47:14] 2024-04-28 06:46:54,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-28 08:47:14] 2024-04-28 06:46:54,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-28 08:47:14] 2024-04-28 06:46:54,889 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-28 08:47:14] 2024-04-28 06:46:54,889 | INFO     | found 0 job(s) in 20 queues
[2024-04-28 08:47:14] 2024-04-28 06:46:54,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-28 08:47:14] 2024-04-28 06:46:54,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-28 08:47:14] 2024-04-28 06:46:54,910 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-28 08:47:14] 2024-04-28 06:46:54,910 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-28 08:47:14] 2024-04-28 06:46:54,910 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-28 08:47:14] 2024-04-28 06:46:54,911 | INFO     | will abort loop
[2024-04-28 08:47:14] 2024-04-28 06:46:55,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-28 08:47:14] 2024-04-28 06:46:55,176 | INFO     | all job control threads have been joined
[2024-04-28 08:47:14] 2024-04-28 06:46:55,511 | INFO     | all data control threads have been joined
[2024-04-28 08:47:14] 2024-04-28 06:46:55,893 | INFO     | [job] retrieve thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:55,916 | INFO     | [job] job monitor thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:56,000 | INFO     | [job] create_data_payload thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:56,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-28 08:47:14] 2024-04-28 06:46:56,025 | INFO     | all payload control threads have been joined
[2024-04-28 08:47:14] 2024-04-28 06:46:56,055 | INFO     | [payload] validate_pre thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:56,140 | INFO     | [data] copytool_in thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:56,181 | INFO     | [job] control thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:56,219 | INFO     | [payload] validate_post thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:56,516 | INFO     | [data] control thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:57,029 | INFO     | [payload] control thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:57,149 | INFO     | [payload] execute_payloads thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:57,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-28 08:47:14] 2024-04-28 06:46:57,294 | INFO     | [job] validate thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:57,451 | INFO     | [payload] failed_post thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:58,006 | INFO     | [data] copytool_out thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:58,173 | INFO     | [job] queue monitor thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:46:59,009 | INFO     | [data] queue_monitor thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:47:05,941 | INFO     | job.realtimelogging is not enabled
[2024-04-28 08:47:14] 2024-04-28 06:47:06,946 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-28 08:47:14] 2024-04-28 06:47:08,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47254528373824)>', '<ExcThread(monitor, started 47254705911552)>']
[2024-04-28 08:47:14] 2024-04-28 06:47:08,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-28 08:47:14] 2024-04-28 06:47:08,959 | INFO     | [monitor] control thread has ended
[2024-04-28 08:47:14] 2024-04-28 06:47:13,963 | INFO     | all workflow threads have been joined
[2024-04-28 08:47:14] 2024-04-28 06:47:13,963 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-28 08:47:14] 2024-04-28 06:47:13,964 | INFO     | traces error code: 0
[2024-04-28 08:47:14] 2024-04-28 06:47:13,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-28 08:47:14] 2024-04-28 06:47:14,028 [wrapper] ==== pilot stdout END ====
[2024-04-28 08:47:14] 2024-04-28 06:47:14,030 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-28 08:47:14] 2024-04-28 06:47:14,032 [wrapper] pilotpid: 494126
[2024-04-28 08:47:14] 2024-04-28 06:47:14,034 [wrapper] Pilot exit status: 0
[2024-04-28 08:47:14] 2024-04-28 06:47:14,040 [wrapper] pandaids: 6181728944
[2024-04-28 08:47:14] 2024-04-28 06:47:14,093 [wrapper] cleanup: SIGTERM to supervisor_pilot  941911 494127
[2024-04-28 08:47:14] 2024-04-28 06:47:14,094 [wrapper] Test setup, not cleaning
[2024-04-28 08:47:14] 2024-04-28 06:47:14,096 [wrapper] ==== wrapper stdout END ====
[2024-04-28 08:47:14] 2024-04-28 06:47:14,097 [wrapper] ==== wrapper stderr END ====
[2024-04-28 08:47:14] 2024-04-28 06:47:14,101 [wrapper] apfmon messages muted
[2024-04-28 08:47:14]  *** Error codes and diagnostics ***
[2024-04-28 08:47:14]     "exeErrorCode": 0,
[2024-04-28 08:47:14]     "exeErrorDiag": "",
[2024-04-28 08:47:14]     "pilotErrorCode": 0,
[2024-04-28 08:47:14]     "pilotErrorDiag": "",
[2024-04-28 08:47:14]  *** Listing of results directory ***
[2024-04-28 08:47:14] total 611600
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc    462745 Apr 21 03:04 pilot3.tar.gz
[2024-04-28 08:47:14] -rwx------ 1 boinc boinc     32211 Apr 21 03:08 runpilot2-wrapper.sh
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc      6720 Apr 21 03:08 queuedata.json
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc       100 Apr 28 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-28 08:47:14] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 04:37 run_atlas
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc       105 Apr 28 04:37 job.xml
[2024-04-28 08:47:14] -rw-r--r-- 2 boinc boinc 451829257 Apr 28 04:37 EVNT.38204277._000767.pool.root.1
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc      6457 Apr 28 04:37 init_data.xml
[2024-04-28 08:47:14] drwxrwx--x 2 boinc boinc      4096 Apr 28 04:37 shared
[2024-04-28 08:47:14] -rw-r--r-- 2 boinc boinc    474801 Apr 28 04:37 input.tar.gz
[2024-04-28 08:47:14] -rw-r--r-- 2 boinc boinc     17537 Apr 28 04:37 start_atlas.sh
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc         0 Apr 28 04:37 boinc_lockfile
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc      2583 Apr 28 04:37 pandaJob.out
[2024-04-28 08:47:14] -rw------- 1 boinc boinc       424 Apr 28 04:37 setup.sh.local
[2024-04-28 08:47:14] -rw------- 1 boinc boinc    997146 Apr 28 04:37 agis_schedconf.cvmfs.json
[2024-04-28 08:47:14] -rw------- 1 boinc boinc   1315307 Apr 28 04:37 cric_ddmendpoints.json
[2024-04-28 08:47:14] drwx------ 4 boinc boinc      4096 Apr 28 04:37 pilot3
[2024-04-28 08:47:14] -rw------- 1 boinc boinc 167502856 Apr 28 08:46 HITS.38204279._020070.pool.root.1
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc       531 Apr 28 08:46 boinc_task_state.xml
[2024-04-28 08:47:14] -rw------- 1 boinc boinc        95 Apr 28 08:46 pilot_heartbeat.json
[2024-04-28 08:47:14] -rw------- 1 boinc boinc      1047 Apr 28 08:46 memory_monitor_summary.json
[2024-04-28 08:47:14] -rw------- 1 boinc boinc         0 Apr 28 08:46 agis_ddmendpoints.agis.ALL.json
[2024-04-28 08:47:14] -rw------- 1 boinc boinc    325377 Apr 28 08:46 log.38204279._020070.job.log.tgz.1
[2024-04-28 08:47:14] -rw------- 1 boinc boinc      7738 Apr 28 08:46 heartbeat.json
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc        28 Apr 28 08:47 wrapper_checkpoint.txt
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc      8192 Apr 28 08:47 boinc_mmap_file
[2024-04-28 08:47:14] -rw------- 1 boinc boinc      4603 Apr 28 08:47 pilotlog.txt
[2024-04-28 08:47:14] -rw------- 1 boinc boinc   1403659 Apr 28 08:47 log.38204279._020070.job.log.1
[2024-04-28 08:47:14] -rw------- 1 boinc boinc       357 Apr 28 08:47 output.list
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc       620 Apr 28 08:47 runtime_log
[2024-04-28 08:47:14] -rw------- 1 boinc boinc   1751040 Apr 28 08:47 result.tar.gz
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc     11410 Apr 28 08:47 runtime_log.err
[2024-04-28 08:47:14] -rw------- 1 boinc boinc       659 Apr 28 08:47 qhVLDmrraI5n9Rq4apoT9bVoABFKDmABFKDmtztZDm5zJKDmOh7fEo.diag
[2024-04-28 08:47:14] -rw-r--r-- 1 boinc boinc     21443 Apr 28 08:47 stderr.txt
[2024-04-28 08:47:14] HITS file was successfully produced:
[2024-04-28 08:47:14] -rw------- 1 boinc boinc 167502856 Apr 28 08:46 shared/HITS.pool.root.1
[2024-04-28 08:47:14]  *** Contents of shared directory: ***
[2024-04-28 08:47:14] total 607020
[2024-04-28 08:47:14] -rw-r--r-- 2 boinc boinc 451829257 Apr 28 04:37 ATLAS.root_0
[2024-04-28 08:47:14] -rw-r--r-- 2 boinc boinc    474801 Apr 28 04:37 input.tar.gz
[2024-04-28 08:47:14] -rw-r--r-- 2 boinc boinc     17537 Apr 28 04:37 start_atlas.sh
[2024-04-28 08:47:14] -rw------- 1 boinc boinc 167502856 Apr 28 08:46 HITS.pool.root.1
[2024-04-28 08:47:14] -rw------- 1 boinc boinc   1751040 Apr 28 08:47 result.tar.gz
08:47:16 (489945): run_atlas exited; CPU time 56144.732067
08:47:16 (489945): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN