Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:32:53 (4187458): wrapper (7.7.26015): starting
08:32:53 (4187458): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 08:32:53] Arguments: --nthreads 4
[2024-04-26 08:32:53] Threads: 4
[2024-04-26 08:32:53] Checking for CVMFS
[2024-04-26 08:32:53] No cvmfs_config command found, will try listing directly
[2024-04-26 08:32:53] CVMFS is ok
[2024-04-26 08:32:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 08:32:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 08:32:53] Further information can be found at the LHC@home message board.
[2024-04-26 08:32:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 08:32:53] Checking for apptainer binary...
[2024-04-26 08:32:53] which: no apptainer in ((null))
[2024-04-26 08:32:53] apptainer is not installed, using version from CVMFS
[2024-04-26 08:32:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 08:32:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-04-26 08:32:54] apptainer works
[2024-04-26 08:32:54] Set ATHENA_PROC_NUMBER=4
[2024-04-26 08:32:54] Set ATHENA_CORE_NUMBER=4
[2024-04-26 08:32:54] Starting ATLAS job with PandaID=6181728871
[2024-04-26 08:32:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 11:43:10]  *** The last 200 lines of the pilot log: ***
[2024-04-26 11:43:10]  lfn=log.38204279._020004.job.log.tgz.1
[2024-04-26 11:43:10]  mtime=0
[2024-04-26 11:43:10]  protocol_id=None
[2024-04-26 11:43:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 11:43:10]  replicas=None
[2024-04-26 11:43:10]  scope=mc23_13p6TeV
[2024-04-26 11:43:10]  status=None
[2024-04-26 11:43:10]  status_code=0
[2024-04-26 11:43:10]  storage_token=
[2024-04-26 11:43:10]  surl=/scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6181728871/log.38204279._020004.job.log.tgz.1
[2024-04-26 11:43:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/da/log.38204279._020004.job.log.tgz.1
[2024-04-26 11:43:10]  workdir=None
[2024-04-26 11:43:10] ]
[2024-04-26 11:43:10] 2024-04-26 09:42:41,500 | INFO     | transferring file log.38204279._020004.job.log.tgz.1 from /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6181728871/log.38204279._020004.job.log.tgz.1 to /scratch/b
[2024-04-26 11:43:10] 2024-04-26 09:42:41,501 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6181728871/log.38204279._020004.job.log.tgz.1 /scratch/boinc/var/slot36/slots/0/lo
[2024-04-26 11:43:10] 2024-04-26 09:42:41,530 | INFO     | adding to output.list: log.38204279._020004.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/da/log.38204279._020004.job.log.tg
[2024-04-26 11:43:10] 2024-04-26 09:42:41,530 | INFO     | summary of transferred files:
[2024-04-26 11:43:10] 2024-04-26 09:42:41,531 | INFO     |  -- lfn=log.38204279._020004.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 11:43:10] 2024-04-26 09:42:41,531 | INFO     | stage-out finished correctly
[2024-04-26 11:43:10] 2024-04-26 09:42:41,867 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 11:43:10] 2024-04-26 09:42:43,340 | INFO     | job 6181728871 has state=finished
[2024-04-26 11:43:10] 2024-04-26 09:42:43,340 | INFO     | preparing for final server update for job 6181728871 in state='finished'
[2024-04-26 11:43:10] 2024-04-26 09:42:43,341 | INFO     | this job has now completed (state=finished)
[2024-04-26 11:43:10] 2024-04-26 09:42:43,341 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 11:43:10] 2024-04-26 09:42:43,341 | INFO     | job 6181728871 has finished - writing final server update
[2024-04-26 11:43:10] 2024-04-26 09:42:43,342 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1317414/.job.ad'
[2024-04-26 11:43:10] 2024-04-26 09:42:43,342 | INFO     | total number of processed events: 400 (read)
[2024-04-26 11:43:10] 2024-04-26 09:42:43,353 | INFO     | executing command: lscpu
[2024-04-26 11:43:10] 2024-04-26 09:42:43,508 | WARNING  | process 6963 is no longer using CPU - aborting
[2024-04-26 11:43:10] 2024-04-26 09:42:43,509 | INFO     | will not send any job update
[2024-04-26 11:43:10] 2024-04-26 09:42:43,558 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-26 11:43:10] 2024-04-26 09:42:43,558 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 11:43:10] 2024-04-26 09:42:43,590 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 11:43:10] 2024-04-26 09:42:46,014 | INFO     | monitor loop #857: job 0:6181728871 is in state 'finished'
[2024-04-26 11:43:10] 2024-04-26 09:42:46,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,526 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 11:43:10] 2024-04-26 09:42:47,526 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6181728871/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,527 | INFO     | extracted standard info from prmon json
[2024-04-26 11:43:10] 2024-04-26 09:42:47,528 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 11:43:10] 2024-04-26 09:42:47,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 11:43:10] 2024-04-26 09:42:47,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 11:43:10] 2024-04-26 09:42:47,531 | INFO     | fitting pss+swap vs Time
[2024-04-26 11:43:10] 2024-04-26 09:42:47,534 | INFO     | current chi2=3.4545214281028396 (change=-0.05803169838045204 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,534 | INFO     | right removable region: 180
[2024-04-26 11:43:10] 2024-04-26 09:42:47,535 | INFO     | current chi2=1.2225314046450781 (change=64.59014987050726 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,536 | INFO     | current chi2=0.056822829162813254 (change=95.35203521587162 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,538 | INFO     | current chi2=0.018042189903526417 (change=68.24834284151795 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,539 | INFO     | current chi2=0.009425772597997957 (change=47.75704807233155 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,540 | INFO     | current chi2=0.00619390681952009 (change=34.28754242558662 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,541 | INFO     | current chi2=0.0034323515883416234 (change=44.58503028291334 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,541 | INFO     | current chi2=0.0017863636581292126 (change=47.955108555988204 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,542 | INFO     | current chi2=0.0004950090864791986 (change=72.28956801564124 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,543 | INFO     | current chi2=0.00014044186060410463 (change=71.62842775210223 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,544 | INFO     | current chi2=0.00013976379606180797 (change=0.4828080028134026 %)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,544 | INFO     | left removable region: 100
[2024-04-26 11:43:10] 2024-04-26 09:42:47,544 | INFO     | current memory leak: 2.70 B/s (using 80 data points, chi2=0.00)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | ..............................
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | . Timing measurements:
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | . get job = 0 s
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | . initial setup = 1 s
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | . payload setup = 6 s
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | . stage-in = 0 s
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | . payload execution = 11349 s
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | . stage-out = 0 s
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | . log creation = 0 s
[2024-04-26 11:43:10] 2024-04-26 09:42:47,545 | INFO     | ..............................
[2024-04-26 11:43:10] 2024-04-26 09:42:47,741 | INFO     | 
[2024-04-26 11:43:10] 2024-04-26 09:42:47,741 | INFO     | job summary report
[2024-04-26 11:43:10] 2024-04-26 09:42:47,741 | INFO     | --------------------------------------------------
[2024-04-26 11:43:10] 2024-04-26 09:42:47,741 | INFO     | PanDA job id: 6181728871
[2024-04-26 11:43:10] 2024-04-26 09:42:47,741 | INFO     | task id: 38204279
[2024-04-26 11:43:10] 2024-04-26 09:42:47,741 | INFO     | errors: (none)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,741 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 11:43:10] 2024-04-26 09:42:47,741 | INFO     | pilot state: finished 
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | transexitcode: 0
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | exeerrorcode: 0
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | exeerrordiag: 
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | exitcode: 0
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | exitmsg: OK
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | cpuconsumptiontime: 42316 s
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | nevents: 400
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | neventsw: 0
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | pid: 6963
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | pgrp: 6963
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | corecount: 4
[2024-04-26 11:43:10] 2024-04-26 09:42:47,742 | INFO     | event service: False
[2024-04-26 11:43:10] 2024-04-26 09:42:47,743 | INFO     | sizes: {0: 2375590, 5: 2375796, 11: 2375852, 11359: 2405017, 11360: 2405016, 11361: 2414238, 11367: 2414352}
[2024-04-26 11:43:10] 2024-04-26 09:42:47,743 | INFO     | --------------------------------------------------
[2024-04-26 11:43:10] 2024-04-26 09:42:47,743 | INFO     | 
[2024-04-26 11:43:10] 2024-04-26 09:42:47,743 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-04-26 11:43:10] 2024-04-26 09:42:47,760 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,762 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 11:43:10] 2024-04-26 09:42:47,763 | INFO     | job 6181728871 has completed (purged errors)
[2024-04-26 11:43:10] 2024-04-26 09:42:47,763 | INFO     | overall cleanup function is called
[2024-04-26 11:43:10] 2024-04-26 09:42:48,770 | INFO     | --- collectZombieJob: --- 10, [6963]
[2024-04-26 11:43:10] 2024-04-26 09:42:48,770 | INFO     | zombie collector waiting for pid 6963
[2024-04-26 11:43:10] 2024-04-26 09:42:48,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 11:43:10] 2024-04-26 09:42:49,775 | INFO     | collected zombie processes
[2024-04-26 11:43:10] 2024-04-26 09:42:49,775 | INFO     | will now attempt to kill all subprocesses of pid=6963
[2024-04-26 11:43:10] 2024-04-26 09:42:50,009 | INFO     | process IDs to be killed: [6963] (in reverse order)
[2024-04-26 11:43:10] 2024-04-26 09:42:50,213 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 11:43:10] 2024-04-26 09:42:50,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 11:43:10] 2024-04-26 09:42:50,232 | INFO     | did not find any defunct processes belonging to 6963
[2024-04-26 11:43:10] 2024-04-26 09:42:50,246 | INFO     | did not find any defunct processes belonging to 6963
[2024-04-26 11:43:10] 2024-04-26 09:42:50,247 | INFO     | ready for new job
[2024-04-26 11:43:10] 2024-04-26 09:42:50,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 11:43:10] 2024-04-26 09:42:50,249 | INFO     | *************************************
[2024-04-26 11:43:10] 2024-04-26 09:42:50,249 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 11:43:10] 2024-04-26 09:42:50,249 | INFO     | *************************************
[2024-04-26 11:43:10] 2024-04-26 09:42:50,249 | INFO     | 
[2024-04-26 11:43:10] 2024-04-26 09:42:50,256 | INFO     | architecture information:
[2024-04-26 11:43:10] 2024-04-26 09:42:50,256 | INFO     | executing command: cat /etc/os-release
[2024-04-26 11:43:10] 2024-04-26 09:42:50,277 | INFO     | cat /etc/os-release:
[2024-04-26 11:43:10] NAME="CentOS Linux"
[2024-04-26 11:43:10] VERSION="7 (Core)"
[2024-04-26 11:43:10] ID="centos"
[2024-04-26 11:43:10] ID_LIKE="rhel fedora"
[2024-04-26 11:43:10] VERSION_ID="7"
[2024-04-26 11:43:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 11:43:10] ANSI_COLOR="0;31"
[2024-04-26 11:43:10] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 11:43:10] HOME_URL="https://www.centos.org/"
[2024-04-26 11:43:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 11:43:10] 
[2024-04-26 11:43:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 11:43:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 11:43:10] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 11:43:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 11:43:10] 
[2024-04-26 11:43:10] 2024-04-26 09:42:50,277 | INFO     | *************************************
[2024-04-26 11:43:10] 2024-04-26 09:42:50,780 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-04-26 11:43:10] 2024-04-26 09:42:50,797 | INFO     | sufficient remaining disk space (3140588929024 B)
[2024-04-26 11:43:10] 2024-04-26 09:42:50,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 11:43:10] 2024-04-26 09:42:50,798 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 11:43:10] 2024-04-26 09:42:50,798 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 11:43:10] 2024-04-26 09:42:50,799 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 11:43:10] 2024-04-26 09:42:50,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 11:43:10] 2024-04-26 09:42:50,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 11:43:10] 2024-04-26 09:42:50,964 | INFO     | all data control threads have been joined
[2024-04-26 11:43:10] 2024-04-26 09:42:50,977 | INFO     | all job control threads have been joined
[2024-04-26 11:43:10] 2024-04-26 09:42:51,026 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-26 11:43:10] 2024-04-26 09:42:51,026 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-26 11:43:10] 2024-04-26 09:42:51,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 11:43:10] 2024-04-26 09:42:51,026 | INFO     | will abort loop
[2024-04-26 11:43:10] 2024-04-26 09:42:51,474 | INFO     | all payload control threads have been joined
[2024-04-26 11:43:10] 2024-04-26 09:42:51,803 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:51,803 | INFO     | [job] retrieve thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:51,949 | INFO     | [job] validate thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:51,969 | INFO     | [data] control thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:51,982 | INFO     | [job] control thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:52,031 | INFO     | [job] job monitor thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:52,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 11:43:10] 2024-04-26 09:42:52,219 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:52,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 11:43:10] 2024-04-26 09:42:52,471 | INFO     | [payload] failed_post thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:52,479 | INFO     | [payload] control thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:52,541 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:52,632 | INFO     | [data] copytool_in thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:52,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 11:43:10] 2024-04-26 09:42:52,959 | INFO     | [payload] validate_post thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:53,662 | INFO     | [job] queue monitor thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:54,118 | INFO     | [data] copytool_out thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:42:56,451 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:43:01,554 | INFO     | job.realtimelogging is not enabled
[2024-04-26 11:43:10] 2024-04-26 09:43:02,559 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 11:43:10] 2024-04-26 09:43:04,580 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47224311342144)>', '<ExcThread(monitor, started 47224486778624)>']
[2024-04-26 11:43:10] 2024-04-26 09:43:04,870 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 11:43:10] 2024-04-26 09:43:04,870 | INFO     | [monitor] control thread has ended
[2024-04-26 11:43:10] 2024-04-26 09:43:09,605 | INFO     | all workflow threads have been joined
[2024-04-26 11:43:10] 2024-04-26 09:43:09,605 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 11:43:10] 2024-04-26 09:43:09,605 | INFO     | traces error code: 0
[2024-04-26 11:43:10] 2024-04-26 09:43:09,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 11:43:10] 2024-04-26 09:43:09,696 [wrapper] ==== pilot stdout END ====
[2024-04-26 11:43:10] 2024-04-26 09:43:09,699 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 11:43:10] 2024-04-26 09:43:09,701 [wrapper] pilotpid: 4192141
[2024-04-26 11:43:10] 2024-04-26 09:43:09,704 [wrapper] Pilot exit status: 0
[2024-04-26 11:43:10] 2024-04-26 09:43:09,715 [wrapper] pandaids: 6181728871
[2024-04-26 11:43:10] 2024-04-26 09:43:09,814 [wrapper] cleanup: SIGTERM to supervisor_pilot 1086687 4192142
[2024-04-26 11:43:10] 2024-04-26 09:43:09,818 [wrapper] Test setup, not cleaning
[2024-04-26 11:43:10] 2024-04-26 09:43:09,820 [wrapper] ==== wrapper stdout END ====
[2024-04-26 11:43:10] 2024-04-26 09:43:09,822 [wrapper] ==== wrapper stderr END ====
[2024-04-26 11:43:10] 2024-04-26 09:43:09,827 [wrapper] apfmon messages muted
[2024-04-26 11:43:10]  *** Error codes and diagnostics ***
[2024-04-26 11:43:10]     "exeErrorCode": 0,
[2024-04-26 11:43:10]     "exeErrorDiag": "",
[2024-04-26 11:43:10]     "pilotErrorCode": 0,
[2024-04-26 11:43:10]     "pilotErrorDiag": "",
[2024-04-26 11:43:10]  *** Listing of results directory ***
[2024-04-26 11:43:10] total 610336
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc    462745 Apr 21 02:54 pilot3.tar.gz
[2024-04-26 11:43:10] -rwx------ 1 boinc boinc     32211 Apr 21 03:00 runpilot2-wrapper.sh
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc      6720 Apr 21 03:00 queuedata.json
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc       100 Apr 26 08:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 11:43:10] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 08:32 run_atlas
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc       105 Apr 26 08:32 job.xml
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc      6644 Apr 26 08:32 init_data.xml
[2024-04-26 11:43:10] -rw-r--r-- 2 boinc boinc 447383011 Apr 26 08:32 EVNT.38204277._000764.pool.root.1
[2024-04-26 11:43:10] -rw-r--r-- 2 boinc boinc     17537 Apr 26 08:32 start_atlas.sh
[2024-04-26 11:43:10] drwxrwx--x 2 boinc boinc      4096 Apr 26 08:32 shared
[2024-04-26 11:43:10] -rw-r--r-- 2 boinc boinc    474798 Apr 26 08:32 input.tar.gz
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc         0 Apr 26 08:32 boinc_lockfile
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc      2583 Apr 26 08:32 pandaJob.out
[2024-04-26 11:43:10] -rw------- 1 boinc boinc       424 Apr 26 08:32 setup.sh.local
[2024-04-26 11:43:10] -rw------- 1 boinc boinc    993582 Apr 26 08:33 agis_schedconf.cvmfs.json
[2024-04-26 11:43:10] -rw------- 1 boinc boinc   1315307 Apr 26 08:33 cric_ddmendpoints.json
[2024-04-26 11:43:10] drwx------ 4 boinc boinc      4096 Apr 26 08:33 pilot3
[2024-04-26 11:43:10] -rw------- 1 boinc boinc 171387224 Apr 26 11:42 HITS.38204279._020004.pool.root.1
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc       532 Apr 26 11:42 boinc_task_state.xml
[2024-04-26 11:43:10] -rw------- 1 boinc boinc      1050 Apr 26 11:42 memory_monitor_summary.json
[2024-04-26 11:43:10] -rw------- 1 boinc boinc         0 Apr 26 11:42 agis_ddmendpoints.agis.ALL.json
[2024-04-26 11:43:10] -rw------- 1 boinc boinc    306794 Apr 26 11:42 log.38204279._020004.job.log.tgz.1
[2024-04-26 11:43:10] -rw------- 1 boinc boinc        95 Apr 26 11:42 pilot_heartbeat.json
[2024-04-26 11:43:10] -rw------- 1 boinc boinc      7712 Apr 26 11:42 heartbeat.json
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc      8192 Apr 26 11:43 boinc_mmap_file
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc        28 Apr 26 11:43 wrapper_checkpoint.txt
[2024-04-26 11:43:10] -rw------- 1 boinc boinc      4603 Apr 26 11:43 pilotlog.txt
[2024-04-26 11:43:10] -rw------- 1 boinc boinc   1060402 Apr 26 11:43 log.38204279._020004.job.log.1
[2024-04-26 11:43:10] -rw------- 1 boinc boinc       357 Apr 26 11:43 output.list
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc       620 Apr 26 11:43 runtime_log
[2024-04-26 11:43:10] -rw------- 1 boinc boinc   1382400 Apr 26 11:43 result.tar.gz
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc     11410 Apr 26 11:43 runtime_log.err
[2024-04-26 11:43:10] -rw------- 1 boinc boinc       658 Apr 26 11:43 U5ONDmyjaI5np2BDcpmwOghnABFKDmABFKDmJjxZDmgnGKDmuX2DBo.diag
[2024-04-26 11:43:10] -rw-r--r-- 1 boinc boinc     21564 Apr 26 11:43 stderr.txt
[2024-04-26 11:43:10] HITS file was successfully produced:
[2024-04-26 11:43:10] -rw------- 1 boinc boinc 171387224 Apr 26 11:42 shared/HITS.pool.root.1
[2024-04-26 11:43:10]  *** Contents of shared directory: ***
[2024-04-26 11:43:10] total 606116
[2024-04-26 11:43:10] -rw-r--r-- 2 boinc boinc 447383011 Apr 26 08:32 ATLAS.root_0
[2024-04-26 11:43:10] -rw-r--r-- 2 boinc boinc     17537 Apr 26 08:32 start_atlas.sh
[2024-04-26 11:43:10] -rw-r--r-- 2 boinc boinc    474798 Apr 26 08:32 input.tar.gz
[2024-04-26 11:43:10] -rw------- 1 boinc boinc 171387224 Apr 26 11:42 HITS.pool.root.1
[2024-04-26 11:43:10] -rw------- 1 boinc boinc   1382400 Apr 26 11:43 result.tar.gz
11:43:11 (4187458): run_atlas exited; CPU time 42029.822210
11:43:11 (4187458): called boinc_finish(0)

</stderr_txt>
]]>

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