Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:04:01 (2610312): wrapper (7.7.26015): starting
04:04:01 (2610312): wrapper: running run_atlas (--nthreads 4)
[2024-04-28 04:04:01] Arguments: --nthreads 4
[2024-04-28 04:04:01] Threads: 4
[2024-04-28 04:04:01] Checking for CVMFS
[2024-04-28 04:04:01] No cvmfs_config command found, will try listing directly
[2024-04-28 04:04:01] CVMFS is ok
[2024-04-28 04:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-28 04:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-28 04:04:01] Further information can be found at the LHC@home message board.
[2024-04-28 04:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-28 04:04:01] Checking for apptainer binary...
[2024-04-28 04:04:01] which: no apptainer in ((null))
[2024-04-28 04:04:01] apptainer is not installed, using version from CVMFS
[2024-04-28 04:04:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-28 04:04:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-04-28 04:04:02] apptainer works
[2024-04-28 04:04:02] Set ATHENA_PROC_NUMBER=4
[2024-04-28 04:04:02] Set ATHENA_CORE_NUMBER=4
[2024-04-28 04:04:02] Starting ATLAS job with PandaID=6181710789
[2024-04-28 04:04:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-28 07:00:01]  *** The last 200 lines of the pilot log: ***
[2024-04-28 07:00:01]  domain=
[2024-04-28 07:00:01]  filesize=284534
[2024-04-28 07:00:01]  filetype=log
[2024-04-28 07:00:01]  guid=b0b0e60c-cecc-4b86-a3a3-3f75df385c1d
[2024-04-28 07:00:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-28 07:00:01]  is_tar=False
[2024-04-28 07:00:01]  lfn=log.38204279._019208.job.log.tgz.1
[2024-04-28 07:00:01]  mtime=0
[2024-04-28 07:00:01]  protocol_id=None
[2024-04-28 07:00:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-28 07:00:01]  replicas=None
[2024-04-28 07:00:01]  scope=mc23_13p6TeV
[2024-04-28 07:00:01]  status=None
[2024-04-28 07:00:01]  status_code=0
[2024-04-28 07:00:01]  storage_token=
[2024-04-28 07:00:01]  surl=/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6181710789/log.38204279._019208.job.log.tgz.1
[2024-04-28 07:00:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/7f/log.38204279._019208.job.log.tgz.1
[2024-04-28 07:00:01]  workdir=None
[2024-04-28 07:00:01] ]
[2024-04-28 07:00:01] 2024-04-28 04:59:36,139 | INFO     | transferring file log.38204279._019208.job.log.tgz.1 from /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6181710789/log.38204279._019208.job.log.tgz.1 to /scratch/b
[2024-04-28 07:00:01] 2024-04-28 04:59:36,139 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6181710789/log.38204279._019208.job.log.tgz.1 /scratch/boinc/var/slot76/slots/0/lo
[2024-04-28 07:00:01] 2024-04-28 04:59:36,164 | INFO     | adding to output.list: log.38204279._019208.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/7f/log.38204279._019208.job.log.tg
[2024-04-28 07:00:01] 2024-04-28 04:59:36,164 | INFO     | summary of transferred files:
[2024-04-28 07:00:01] 2024-04-28 04:59:36,165 | INFO     |  -- lfn=log.38204279._019208.job.log.tgz.1, status_code=0, status=transferred
[2024-04-28 07:00:01] 2024-04-28 04:59:36,165 | INFO     | stage-out finished correctly
[2024-04-28 07:00:01] 2024-04-28 04:59:37,993 | WARNING  | process 2634792 is no longer using CPU - aborting
[2024-04-28 07:00:01] 2024-04-28 04:59:37,994 | INFO     | will not send any job update
[2024-04-28 07:00:01] 2024-04-28 04:59:39,184 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-28 07:00:01] 2024-04-28 04:59:39,245 | INFO     | job 6181710789 has state=finished
[2024-04-28 07:00:01] 2024-04-28 04:59:39,245 | INFO     | preparing for final server update for job 6181710789 in state='finished'
[2024-04-28 07:00:01] 2024-04-28 04:59:39,246 | INFO     | this job has now completed (state=finished)
[2024-04-28 07:00:01] 2024-04-28 04:59:39,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-28 07:00:01] 2024-04-28 04:59:39,246 | INFO     | job 6181710789 has finished - writing final server update
[2024-04-28 07:00:01] 2024-04-28 04:59:39,246 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_37024/.job.ad'
[2024-04-28 07:00:01] 2024-04-28 04:59:39,246 | INFO     | total number of processed events: 400 (read)
[2024-04-28 07:00:01] 2024-04-28 04:59:39,251 | INFO     | executing command: lscpu
[2024-04-28 07:00:01] 2024-04-28 04:59:39,307 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-28 07:00:01] 2024-04-28 04:59:39,307 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-28 07:00:01] 2024-04-28 04:59:39,339 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-28 07:00:01] 2024-04-28 04:59:40,498 | INFO     | monitor loop #798: job 0:6181710789 is in state 'finished'
[2024-04-28 07:00:01] 2024-04-28 04:59:40,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,001 | INFO     | monitor loop #799: job 0:6181710789 is in state 'finished'
[2024-04-28 07:00:01] 2024-04-28 04:59:43,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,507 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-28 07:00:01] 2024-04-28 04:59:43,508 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6181710789/memory_monitor_summary.json (trf name=prmon)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,509 | INFO     | extracted standard info from prmon json
[2024-04-28 07:00:01] 2024-04-28 04:59:43,509 | INFO     | extracted standard memory fields from prmon json
[2024-04-28 07:00:01] 2024-04-28 04:59:43,509 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-28 07:00:01] 2024-04-28 04:59:43,509 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-28 07:00:01] 2024-04-28 04:59:43,513 | INFO     | fitting pss+swap vs Time
[2024-04-28 07:00:01] 2024-04-28 04:59:43,515 | INFO     | current chi2=4.266219392705629 (change=0.07318730145025491 %)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,516 | INFO     | right removable region: 166
[2024-04-28 07:00:01] 2024-04-28 04:59:43,517 | INFO     | current chi2=1.6831829172454136 (change=60.57513957285916 %)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,518 | INFO     | current chi2=0.049547471907417776 (change=97.05632279179116 %)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,519 | INFO     | current chi2=0.0007581162110535612 (change=98.46991948959547 %)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,520 | INFO     | current chi2=0.0004983785456687216 (change=34.2609301315269 %)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,521 | INFO     | current chi2=0.0004160645161812009 (change=16.516366967015443 %)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,521 | INFO     | left removable region: 50
[2024-04-28 07:00:01] 2024-04-28 04:59:43,522 | INFO     | current memory leak: 2.54 B/s (using 116 data points, chi2=0.00)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,522 | INFO     | ..............................
[2024-04-28 07:00:01] 2024-04-28 04:59:43,522 | INFO     | . Timing measurements:
[2024-04-28 07:00:01] 2024-04-28 04:59:43,522 | INFO     | . get job = 0 s
[2024-04-28 07:00:01] 2024-04-28 04:59:43,523 | INFO     | . initial setup = 1 s
[2024-04-28 07:00:01] 2024-04-28 04:59:43,523 | INFO     | . payload setup = 7 s
[2024-04-28 07:00:01] 2024-04-28 04:59:43,523 | INFO     | . stage-in = 0 s
[2024-04-28 07:00:01] 2024-04-28 04:59:43,523 | INFO     | . payload execution = 10496 s
[2024-04-28 07:00:01] 2024-04-28 04:59:43,523 | INFO     | . stage-out = 0 s
[2024-04-28 07:00:01] 2024-04-28 04:59:43,523 | INFO     | . log creation = 0 s
[2024-04-28 07:00:01] 2024-04-28 04:59:43,523 | INFO     | ..............................
[2024-04-28 07:00:01] 2024-04-28 04:59:43,608 | INFO     | 
[2024-04-28 07:00:01] 2024-04-28 04:59:43,609 | INFO     | job summary report
[2024-04-28 07:00:01] 2024-04-28 04:59:43,609 | INFO     | --------------------------------------------------
[2024-04-28 07:00:01] 2024-04-28 04:59:43,609 | INFO     | PanDA job id: 6181710789
[2024-04-28 07:00:01] 2024-04-28 04:59:43,609 | INFO     | task id: 38204279
[2024-04-28 07:00:01] 2024-04-28 04:59:43,609 | INFO     | errors: (none)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,609 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | pilot state: finished 
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | transexitcode: 0
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | exeerrorcode: 0
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | exeerrordiag: 
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | exitcode: 0
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | exitmsg: OK
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | cpuconsumptiontime: 39302 s
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | nevents: 400
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | neventsw: 0
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | pid: 2634792
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | pgrp: 2634792
[2024-04-28 07:00:01] 2024-04-28 04:59:43,610 | INFO     | corecount: 4
[2024-04-28 07:00:01] 2024-04-28 04:59:43,611 | INFO     | event service: False
[2024-04-28 07:00:01] 2024-04-28 04:59:43,611 | INFO     | sizes: {0: 2374069, 1: 2375616, 6: 2375822, 12: 2375850, 10507: 2404736, 10508: 2413718, 10511: 2413902, 10516: 2414072}
[2024-04-28 07:00:01] 2024-04-28 04:59:43,611 | INFO     | --------------------------------------------------
[2024-04-28 07:00:01] 2024-04-28 04:59:43,611 | INFO     | 
[2024-04-28 07:00:01] 2024-04-28 04:59:43,611 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2024-04-28 07:00:01] 2024-04-28 04:59:43,635 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,635 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | job 6181710789 has completed (purged errors)
[2024-04-28 07:00:01] 2024-04-28 04:59:43,637 | INFO     | overall cleanup function is called
[2024-04-28 07:00:01] 2024-04-28 04:59:44,644 | INFO     | --- collectZombieJob: --- 10, [2634792]
[2024-04-28 07:00:01] 2024-04-28 04:59:44,645 | INFO     | zombie collector waiting for pid 2634792
[2024-04-28 07:00:01] 2024-04-28 04:59:44,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-28 07:00:01] 2024-04-28 04:59:45,650 | INFO     | collected zombie processes
[2024-04-28 07:00:01] 2024-04-28 04:59:45,650 | INFO     | will now attempt to kill all subprocesses of pid=2634792
[2024-04-28 07:00:01] 2024-04-28 04:59:45,944 | INFO     | process IDs to be killed: [2634792] (in reverse order)
[2024-04-28 07:00:01] 2024-04-28 04:59:46,135 | WARNING  | found no corresponding commands to process id(s)
[2024-04-28 07:00:01] 2024-04-28 04:59:46,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-28 07:00:01] 2024-04-28 04:59:46,154 | INFO     | did not find any defunct processes belonging to 2634792
[2024-04-28 07:00:01] 2024-04-28 04:59:46,167 | INFO     | did not find any defunct processes belonging to 2634792
[2024-04-28 07:00:01] 2024-04-28 04:59:46,167 | INFO     | ready for new job
[2024-04-28 07:00:01] 2024-04-28 04:59:46,167 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-28 07:00:01] 2024-04-28 04:59:46,168 | INFO     | *************************************
[2024-04-28 07:00:01] 2024-04-28 04:59:46,169 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-28 07:00:01] 2024-04-28 04:59:46,169 | INFO     | *************************************
[2024-04-28 07:00:01] 2024-04-28 04:59:46,169 | INFO     | 
[2024-04-28 07:00:01] 2024-04-28 04:59:46,174 | INFO     | architecture information:
[2024-04-28 07:00:01] 2024-04-28 04:59:46,174 | INFO     | executing command: cat /etc/os-release
[2024-04-28 07:00:01] 2024-04-28 04:59:46,190 | INFO     | cat /etc/os-release:
[2024-04-28 07:00:01] NAME="CentOS Linux"
[2024-04-28 07:00:01] VERSION="7 (Core)"
[2024-04-28 07:00:01] ID="centos"
[2024-04-28 07:00:01] ID_LIKE="rhel fedora"
[2024-04-28 07:00:01] VERSION_ID="7"
[2024-04-28 07:00:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-28 07:00:01] ANSI_COLOR="0;31"
[2024-04-28 07:00:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-28 07:00:01] HOME_URL="https://www.centos.org/"
[2024-04-28 07:00:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-28 07:00:01] 
[2024-04-28 07:00:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-28 07:00:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-28 07:00:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-28 07:00:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-28 07:00:01] 
[2024-04-28 07:00:01] 2024-04-28 04:59:46,190 | INFO     | *************************************
[2024-04-28 07:00:01] 2024-04-28 04:59:46,693 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2024-04-28 07:00:01] 2024-04-28 04:59:46,712 | INFO     | sufficient remaining disk space (3032679972864 B)
[2024-04-28 07:00:01] 2024-04-28 04:59:46,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-28 07:00:01] 2024-04-28 04:59:46,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-28 07:00:01] 2024-04-28 04:59:46,713 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-28 07:00:01] 2024-04-28 04:59:46,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-28 07:00:01] 2024-04-28 04:59:46,714 | INFO     | found 0 job(s) in 20 queues
[2024-04-28 07:00:01] 2024-04-28 04:59:46,715 | INFO     | aborting loop
[2024-04-28 07:00:01] 2024-04-28 04:59:46,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-28 07:00:01] 2024-04-28 04:59:46,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-28 07:00:01] 2024-04-28 04:59:46,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-28 07:00:01] 2024-04-28 04:59:46,945 | INFO     | all payload control threads have been joined
[2024-04-28 07:00:01] 2024-04-28 04:59:47,073 | INFO     | all data control threads have been joined
[2024-04-28 07:00:01] 2024-04-28 04:59:47,714 | INFO     | [job] retrieve thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:47,720 | INFO     | [job] job monitor thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:47,780 | INFO     | [payload] validate_post thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:47,833 | INFO     | all job control threads have been joined
[2024-04-28 07:00:01] 2024-04-28 04:59:47,951 | INFO     | [payload] control thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,078 | INFO     | [data] control thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,094 | INFO     | [data] copytool_in thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,200 | INFO     | [payload] execute_payloads thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,510 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-28 07:00:01] 2024-04-28 04:59:48,670 | INFO     | [job] validate thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,758 | INFO     | [data] copytool_out thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,838 | INFO     | [job] control thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,875 | INFO     | [payload] failed_post thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:48,936 | INFO     | [payload] validate_pre thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:49,041 | INFO     | [job] create_data_payload thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:49,624 | INFO     | [job] queue monitor thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:49,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-28 07:00:01] 2024-04-28 04:59:53,759 | INFO     | [data] queue_monitor thread has finished
[2024-04-28 07:00:01] 2024-04-28 04:59:55,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47398010340416)>', '<ExcThread(monitor, started 47398181574400)>']
[2024-04-28 07:00:01] 2024-04-28 04:59:55,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-28 07:00:01] 2024-04-28 04:59:55,761 | INFO     | [monitor] control thread has ended
[2024-04-28 07:00:01] 2024-04-28 05:00:00,297 | INFO     | all workflow threads have been joined
[2024-04-28 07:00:01] 2024-04-28 05:00:00,298 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-28 07:00:01] 2024-04-28 05:00:00,298 | INFO     | traces error code: 0
[2024-04-28 07:00:01] 2024-04-28 05:00:00,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-28 07:00:01] 2024-04-28 05:00:00,361 [wrapper] ==== pilot stdout END ====
[2024-04-28 07:00:01] 2024-04-28 05:00:00,365 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-28 07:00:01] 2024-04-28 05:00:00,379 [wrapper] pilotpid: 2619010
[2024-04-28 07:00:01] 2024-04-28 05:00:00,381 [wrapper] Pilot exit status: 0
[2024-04-28 07:00:01] 2024-04-28 05:00:00,394 [wrapper] pandaids: 6181710789
[2024-04-28 07:00:01] 2024-04-28 05:00:00,480 [wrapper] cleanup: SIGTERM to supervisor_pilot 3611666 2619011
[2024-04-28 07:00:01] 2024-04-28 05:00:00,482 [wrapper] Test setup, not cleaning
[2024-04-28 07:00:01] 2024-04-28 05:00:00,484 [wrapper] ==== wrapper stdout END ====
[2024-04-28 07:00:01] 2024-04-28 05:00:00,490 [wrapper] ==== wrapper stderr END ====
[2024-04-28 07:00:01] 2024-04-28 05:00:00,501 [wrapper] apfmon messages muted
[2024-04-28 07:00:01]  *** Error codes and diagnostics ***
[2024-04-28 07:00:01]     "exeErrorCode": 0,
[2024-04-28 07:00:01]     "exeErrorDiag": "",
[2024-04-28 07:00:01]     "pilotErrorCode": 0,
[2024-04-28 07:00:01]     "pilotErrorDiag": "",
[2024-04-28 07:00:01]  *** Listing of results directory ***
[2024-04-28 07:00:01] total 621664
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc    462745 Apr 21 01:14 pilot3.tar.gz
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc      6720 Apr 21 01:47 queuedata.json
[2024-04-28 07:00:01] -rwx------ 1 boinc boinc     32211 Apr 21 01:48 runpilot2-wrapper.sh
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc       100 Apr 28 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-28 07:00:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 04:03 run_atlas
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc       105 Apr 28 04:03 job.xml
[2024-04-28 07:00:01] -rw-r--r-- 2 boinc boinc 456819702 Apr 28 04:04 EVNT.38204277._000733.pool.root.1
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc      6642 Apr 28 04:04 init_data.xml
[2024-04-28 07:00:01] drwxrwx--x 2 boinc boinc      4096 Apr 28 04:04 shared
[2024-04-28 07:00:01] -rw-r--r-- 2 boinc boinc    474798 Apr 28 04:04 input.tar.gz
[2024-04-28 07:00:01] -rw-r--r-- 2 boinc boinc     17537 Apr 28 04:04 start_atlas.sh
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc         0 Apr 28 04:04 boinc_lockfile
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc      2582 Apr 28 04:04 pandaJob.out
[2024-04-28 07:00:01] -rw------- 1 boinc boinc       424 Apr 28 04:04 setup.sh.local
[2024-04-28 07:00:01] -rw------- 1 boinc boinc    997146 Apr 28 04:04 agis_schedconf.cvmfs.json
[2024-04-28 07:00:01] -rw------- 1 boinc boinc         0 Apr 28 04:04 agis_ddmendpoints.agis.ALL.json
[2024-04-28 07:00:01] -rw------- 1 boinc boinc   1315307 Apr 28 04:04 cric_ddmendpoints.json
[2024-04-28 07:00:01] drwx------ 4 boinc boinc      4096 Apr 28 04:04 pilot3
[2024-04-28 07:00:01] -rw------- 1 boinc boinc 173724878 Apr 28 06:59 HITS.38204279._019208.pool.root.1
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc       531 Apr 28 06:59 boinc_task_state.xml
[2024-04-28 07:00:01] -rw------- 1 boinc boinc      1039 Apr 28 06:59 memory_monitor_summary.json
[2024-04-28 07:00:01] -rw------- 1 boinc boinc    284534 Apr 28 06:59 log.38204279._019208.job.log.tgz.1
[2024-04-28 07:00:01] -rw------- 1 boinc boinc      7684 Apr 28 06:59 heartbeat.json
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc      8192 Apr 28 06:59 boinc_mmap_file
[2024-04-28 07:00:01] -rw------- 1 boinc boinc        95 Apr 28 06:59 pilot_heartbeat.json
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc        28 Apr 28 06:59 wrapper_checkpoint.txt
[2024-04-28 07:00:01] -rw------- 1 boinc boinc      4345 Apr 28 07:00 pilotlog.txt
[2024-04-28 07:00:01] -rw------- 1 boinc boinc    991400 Apr 28 07:00 log.38204279._019208.job.log.1
[2024-04-28 07:00:01] -rw------- 1 boinc boinc       357 Apr 28 07:00 output.list
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc       620 Apr 28 07:00 runtime_log
[2024-04-28 07:00:01] -rw------- 1 boinc boinc   1290240 Apr 28 07:00 result.tar.gz
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc     11410 Apr 28 07:00 runtime_log.err
[2024-04-28 07:00:01] -rw------- 1 boinc boinc       657 Apr 28 07:00 1GNNDmlcZI5n9Rq4apoT9bVoABFKDmABFKDmtztZDmOwJKDmF4Njcn.diag
[2024-04-28 07:00:01] -rw-r--r-- 1 boinc boinc     21200 Apr 28 07:00 stderr.txt
[2024-04-28 07:00:01] HITS file was successfully produced:
[2024-04-28 07:00:01] -rw------- 1 boinc boinc 173724878 Apr 28 06:59 shared/HITS.pool.root.1
[2024-04-28 07:00:01]  *** Contents of shared directory: ***
[2024-04-28 07:00:01] total 617524
[2024-04-28 07:00:01] -rw-r--r-- 2 boinc boinc 456819702 Apr 28 04:04 ATLAS.root_0
[2024-04-28 07:00:01] -rw-r--r-- 2 boinc boinc    474798 Apr 28 04:04 input.tar.gz
[2024-04-28 07:00:01] -rw-r--r-- 2 boinc boinc     17537 Apr 28 04:04 start_atlas.sh
[2024-04-28 07:00:01] -rw------- 1 boinc boinc 173724878 Apr 28 06:59 HITS.pool.root.1
[2024-04-28 07:00:01] -rw------- 1 boinc boinc   1290240 Apr 28 07:00 result.tar.gz
07:00:02 (2610312): run_atlas exited; CPU time 39046.021043
07:00:02 (2610312): called boinc_finish(0)

</stderr_txt>
]]>

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