Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:06:17 (3038974): wrapper (7.7.26015): starting
00:06:17 (3038974): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 00:06:17] Arguments: --nthreads 4
[2024-04-26 00:06:17] Threads: 4
[2024-04-26 00:06:17] Checking for CVMFS
[2024-04-26 00:06:17] No cvmfs_config command found, will try listing directly
[2024-04-26 00:06:17] CVMFS is ok
[2024-04-26 00:06:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 00:06:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 00:06:17] Further information can be found at the LHC@home message board.
[2024-04-26 00:06:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 00:06:17] Checking for apptainer binary...
[2024-04-26 00:06:17] which: no apptainer in ((null))
[2024-04-26 00:06:17] apptainer is not installed, using version from CVMFS
[2024-04-26 00:06:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 00:06:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-04-26 00:06:18] apptainer works
[2024-04-26 00:06:18] Set ATHENA_PROC_NUMBER=4
[2024-04-26 00:06:18] Set ATHENA_CORE_NUMBER=4
[2024-04-26 00:06:18] Starting ATLAS job with PandaID=6180899835
[2024-04-26 00:06:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 02:44:45]  *** The last 200 lines of the pilot log: ***
[2024-04-26 02:44:45]  direct_access_lan=False
[2024-04-26 02:44:45]  direct_access_wan=False
[2024-04-26 02:44:45]  domain=
[2024-04-26 02:44:45]  filesize=276719
[2024-04-26 02:44:45]  filetype=log
[2024-04-26 02:44:45]  guid=cb49ec7d-0c79-4e94-aaf8-9ee53e5cc5e1
[2024-04-26 02:44:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 02:44:45]  is_tar=False
[2024-04-26 02:44:45]  lfn=log.38204327._000953.job.log.tgz.1
[2024-04-26 02:44:45]  mtime=0
[2024-04-26 02:44:45]  protocol_id=None
[2024-04-26 02:44:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 02:44:45]  replicas=None
[2024-04-26 02:44:45]  scope=mc23_13p6TeV
[2024-04-26 02:44:45]  status=None
[2024-04-26 02:44:45]  status_code=0
[2024-04-26 02:44:45]  storage_token=
[2024-04-26 02:44:45]  surl=/scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6180899835/log.38204327._000953.job.log.tgz.1
[2024-04-26 02:44:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/cb/log.38204327._000953.job.log.tgz.1
[2024-04-26 02:44:45]  workdir=None
[2024-04-26 02:44:45] ]
[2024-04-26 02:44:45] 2024-04-26 00:44:22,009 | INFO     | transferring file log.38204327._000953.job.log.tgz.1 from /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6180899835/log.38204327._000953.job.log.tgz.1 to /scratch/b
[2024-04-26 02:44:45] 2024-04-26 00:44:22,009 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6180899835/log.38204327._000953.job.log.tgz.1 /scratch/boinc/var/slot44/slots/0/lo
[2024-04-26 02:44:45] 2024-04-26 00:44:22,030 | INFO     | adding to output.list: log.38204327._000953.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/cb/log.38204327._000953.job.log.tg
[2024-04-26 02:44:45] 2024-04-26 00:44:22,031 | INFO     | summary of transferred files:
[2024-04-26 02:44:45] 2024-04-26 00:44:22,031 | INFO     |  -- lfn=log.38204327._000953.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 02:44:45] 2024-04-26 00:44:22,031 | INFO     | stage-out finished correctly
[2024-04-26 02:44:45] 2024-04-26 00:44:22,245 | INFO     | monitor loop #731: job 0:6180899835 is in state 'finished'
[2024-04-26 02:44:45] 2024-04-26 00:44:22,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 02:44:45] 2024-04-26 00:44:24,025 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 02:44:45] 2024-04-26 00:44:24,746 | INFO     | monitor loop #732: job 0:6180899835 is in state 'finished'
[2024-04-26 02:44:45] 2024-04-26 00:44:24,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 02:44:45] 2024-04-26 00:44:26,438 | INFO     | job 6180899835 has state=finished
[2024-04-26 02:44:45] 2024-04-26 00:44:26,438 | INFO     | preparing for final server update for job 6180899835 in state='finished'
[2024-04-26 02:44:45] 2024-04-26 00:44:26,439 | INFO     | this job has now completed (state=finished)
[2024-04-26 02:44:45] 2024-04-26 00:44:26,439 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 02:44:45] 2024-04-26 00:44:26,439 | INFO     | job 6180899835 has finished - writing final server update
[2024-04-26 02:44:45] 2024-04-26 00:44:26,439 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2152686/.job.ad'
[2024-04-26 02:44:45] 2024-04-26 00:44:26,440 | INFO     | total number of processed events: 400 (read)
[2024-04-26 02:44:45] 2024-04-26 00:44:26,444 | INFO     | executing command: lscpu
[2024-04-26 02:44:45] 2024-04-26 00:44:26,487 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 02:44:45] 2024-04-26 00:44:26,487 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 02:44:45] 2024-04-26 00:44:26,520 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 02:44:45] 2024-04-26 00:44:27,250 | INFO     | monitor loop #733: job 0:6180899835 is in state 'finished'
[2024-04-26 02:44:45] 2024-04-26 00:44:27,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,719 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 02:44:45] 2024-04-26 00:44:29,720 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6180899835/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,721 | INFO     | extracted standard info from prmon json
[2024-04-26 02:44:45] 2024-04-26 00:44:29,721 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 02:44:45] 2024-04-26 00:44:29,721 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 02:44:45] 2024-04-26 00:44:29,721 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 02:44:45] 2024-04-26 00:44:29,723 | INFO     | fitting pss+swap vs Time
[2024-04-26 02:44:45] 2024-04-26 00:44:29,724 | INFO     | current chi2=3.4929727879997086 (change=0.0510077911966505 %)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,724 | INFO     | right removable region: 149
[2024-04-26 02:44:45] 2024-04-26 00:44:29,725 | INFO     | current chi2=1.3796377092475318 (change=60.522624417146076 %)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,725 | INFO     | current chi2=0.07280537751915711 (change=94.72286260145312 %)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,726 | INFO     | current chi2=0.005395264070333609 (change=92.58947037406135 %)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,726 | INFO     | current chi2=0.005028336333636403 (change=6.800922659463408 %)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,727 | INFO     | left removable region: 40
[2024-04-26 02:44:45] 2024-04-26 00:44:29,727 | INFO     | current memory leak: 0.41 B/s (using 109 data points, chi2=0.00)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,727 | INFO     | ..............................
[2024-04-26 02:44:45] 2024-04-26 00:44:29,727 | INFO     | . Timing measurements:
[2024-04-26 02:44:45] 2024-04-26 00:44:29,727 | INFO     | . get job = 0 s
[2024-04-26 02:44:45] 2024-04-26 00:44:29,727 | INFO     | . initial setup = 1 s
[2024-04-26 02:44:45] 2024-04-26 00:44:29,727 | INFO     | . payload setup = 5 s
[2024-04-26 02:44:45] 2024-04-26 00:44:29,728 | INFO     | . stage-in = 0 s
[2024-04-26 02:44:45] 2024-04-26 00:44:29,728 | INFO     | . payload execution = 9452 s
[2024-04-26 02:44:45] 2024-04-26 00:44:29,728 | INFO     | . stage-out = 0 s
[2024-04-26 02:44:45] 2024-04-26 00:44:29,728 | INFO     | . log creation = 0 s
[2024-04-26 02:44:45] 2024-04-26 00:44:29,728 | INFO     | ..............................
[2024-04-26 02:44:45] 2024-04-26 00:44:29,784 | INFO     | 
[2024-04-26 02:44:45] 2024-04-26 00:44:29,784 | INFO     | job summary report
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | --------------------------------------------------
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | PanDA job id: 6180899835
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | task id: 38204327
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | errors: (none)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | pilot state: finished 
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | transexitcode: 0
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | exeerrorcode: 0
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | exeerrordiag: 
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | exitcode: 0
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | exitmsg: OK
[2024-04-26 02:44:45] 2024-04-26 00:44:29,785 | INFO     | cpuconsumptiontime: 35111 s
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | nevents: 400
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | neventsw: 0
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | pid: 3050652
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | pgrp: 3050652
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | corecount: 4
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | event service: False
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | sizes: {0: 2375708, 4: 2375914, 11: 2375942, 9460: 2404358, 9461: 2413340, 9463: 2413396, 9469: 2413694}
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | --------------------------------------------------
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | 
[2024-04-26 02:44:45] 2024-04-26 00:44:29,786 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2024-04-26 02:44:45] 2024-04-26 00:44:29,806 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,806 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,806 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,808 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,808 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 02:44:45] 2024-04-26 00:44:29,808 | INFO     | job 6180899835 has completed (purged errors)
[2024-04-26 02:44:45] 2024-04-26 00:44:29,808 | INFO     | overall cleanup function is called
[2024-04-26 02:44:45] 2024-04-26 00:44:30,816 | INFO     | --- collectZombieJob: --- 10, [3050652]
[2024-04-26 02:44:45] 2024-04-26 00:44:30,816 | INFO     | zombie collector waiting for pid 3050652
[2024-04-26 02:44:45] 2024-04-26 00:44:30,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 02:44:45] 2024-04-26 00:44:31,821 | INFO     | collected zombie processes
[2024-04-26 02:44:45] 2024-04-26 00:44:31,821 | INFO     | will now attempt to kill all subprocesses of pid=3050652
[2024-04-26 02:44:45] 2024-04-26 00:44:31,967 | INFO     | process IDs to be killed: [3050652] (in reverse order)
[2024-04-26 02:44:45] 2024-04-26 00:44:32,056 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 02:44:45] 2024-04-26 00:44:32,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 02:44:45] 2024-04-26 00:44:32,063 | INFO     | did not find any defunct processes belonging to 3050652
[2024-04-26 02:44:45] 2024-04-26 00:44:32,069 | INFO     | did not find any defunct processes belonging to 3050652
[2024-04-26 02:44:45] 2024-04-26 00:44:32,069 | INFO     | ready for new job
[2024-04-26 02:44:45] 2024-04-26 00:44:32,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 02:44:45] 2024-04-26 00:44:32,070 | INFO     | *************************************
[2024-04-26 02:44:45] 2024-04-26 00:44:32,070 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 02:44:45] 2024-04-26 00:44:32,070 | INFO     | *************************************
[2024-04-26 02:44:45] 2024-04-26 00:44:32,070 | INFO     | 
[2024-04-26 02:44:45] 2024-04-26 00:44:32,073 | INFO     | architecture information:
[2024-04-26 02:44:45] 2024-04-26 00:44:32,073 | INFO     | executing command: cat /etc/os-release
[2024-04-26 02:44:45] 2024-04-26 00:44:32,087 | INFO     | cat /etc/os-release:
[2024-04-26 02:44:45] NAME="CentOS Linux"
[2024-04-26 02:44:45] VERSION="7 (Core)"
[2024-04-26 02:44:45] ID="centos"
[2024-04-26 02:44:45] ID_LIKE="rhel fedora"
[2024-04-26 02:44:45] VERSION_ID="7"
[2024-04-26 02:44:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 02:44:45] ANSI_COLOR="0;31"
[2024-04-26 02:44:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 02:44:45] HOME_URL="https://www.centos.org/"
[2024-04-26 02:44:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 02:44:45] 
[2024-04-26 02:44:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 02:44:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 02:44:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 02:44:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 02:44:45] 
[2024-04-26 02:44:45] 2024-04-26 00:44:32,088 | INFO     | *************************************
[2024-04-26 02:44:45] 2024-04-26 00:44:32,590 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2024-04-26 02:44:45] 2024-04-26 00:44:32,609 | INFO     | sufficient remaining disk space (624810786816 B)
[2024-04-26 02:44:45] 2024-04-26 00:44:32,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 02:44:45] 2024-04-26 00:44:32,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 02:44:45] 2024-04-26 00:44:32,610 | INFO     | all job control threads have been joined
[2024-04-26 02:44:45] 2024-04-26 00:44:32,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 02:44:45] 2024-04-26 00:44:33,127 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 02:44:45] 2024-04-26 00:44:33,127 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 02:44:45] 2024-04-26 00:44:33,127 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 02:44:45] 2024-04-26 00:44:33,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 02:44:45] 2024-04-26 00:44:33,265 | INFO     | aborting loop
[2024-04-26 02:44:45] 2024-04-26 00:44:33,384 | INFO     | all payload control threads have been joined
[2024-04-26 02:44:45] 2024-04-26 00:44:33,611 | INFO     | [job] control thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:33,612 | INFO     | [job] retrieve thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:33,626 | INFO     | all data control threads have been joined
[2024-04-26 02:44:45] 2024-04-26 00:44:33,668 | INFO     | [payload] validate_post thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:33,787 | INFO     | [data] copytool_in thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:33,890 | INFO     | [payload] failed_post thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:34,270 | INFO     | [job] job monitor thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:34,385 | INFO     | [payload] control thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:34,401 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:34,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 02:44:45] 2024-04-26 00:44:34,616 | INFO     | [data] copytool_out thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:34,631 | INFO     | [data] control thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:34,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 02:44:45] 2024-04-26 00:44:34,882 | INFO     | [job] validate thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:34,953 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:35,002 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:35,025 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:35,794 | INFO     | [job] queue monitor thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:38,589 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 02:44:45] 2024-04-26 00:44:39,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47557891732544)>', '<ExcThread(monitor, started 47558062966528)>']
[2024-04-26 02:44:45] 2024-04-26 00:44:40,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 02:44:45] 2024-04-26 00:44:40,162 | INFO     | [monitor] control thread has ended
[2024-04-26 02:44:45] 2024-04-26 00:44:44,580 | INFO     | all workflow threads have been joined
[2024-04-26 02:44:45] 2024-04-26 00:44:44,580 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 02:44:45] 2024-04-26 00:44:44,581 | INFO     | traces error code: 0
[2024-04-26 02:44:45] 2024-04-26 00:44:44,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 02:44:45] 2024-04-26 00:44:44,667 [wrapper] ==== pilot stdout END ====
[2024-04-26 02:44:45] 2024-04-26 00:44:44,669 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 02:44:45] 2024-04-26 00:44:44,670 [wrapper] pilotpid: 3043571
[2024-04-26 02:44:45] 2024-04-26 00:44:44,672 [wrapper] Pilot exit status: 0
[2024-04-26 02:44:45] 2024-04-26 00:44:44,679 [wrapper] pandaids: 6180899835
[2024-04-26 02:44:45] 2024-04-26 00:44:44,734 [wrapper] cleanup: SIGTERM to supervisor_pilot 3512308 3043572
[2024-04-26 02:44:45] 2024-04-26 00:44:44,736 [wrapper] Test setup, not cleaning
[2024-04-26 02:44:45] 2024-04-26 00:44:44,739 [wrapper] ==== wrapper stdout END ====
[2024-04-26 02:44:45] 2024-04-26 00:44:44,741 [wrapper] ==== wrapper stderr END ====
[2024-04-26 02:44:45] 2024-04-26 00:44:44,745 [wrapper] apfmon messages muted
[2024-04-26 02:44:45]  *** Error codes and diagnostics ***
[2024-04-26 02:44:45]     "exeErrorCode": 0,
[2024-04-26 02:44:45]     "exeErrorDiag": "",
[2024-04-26 02:44:45]     "pilotErrorCode": 0,
[2024-04-26 02:44:45]     "pilotErrorDiag": "",
[2024-04-26 02:44:45]  *** Listing of results directory ***
[2024-04-26 02:44:45] total 685612
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc    462745 Apr 19 10:32 pilot3.tar.gz
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc      6720 Apr 19 10:32 queuedata.json
[2024-04-26 02:44:45] -rwx------ 1 boinc boinc     32211 Apr 19 10:34 runpilot2-wrapper.sh
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc       100 Apr 26 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 02:44:45] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 00:06 run_atlas
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc       105 Apr 26 00:06 job.xml
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc      6663 Apr 26 00:06 init_data.xml
[2024-04-26 02:44:45] -rw-r--r-- 2 boinc boinc 517356226 Apr 26 00:06 EVNT.38204325._000064.pool.root.1
[2024-04-26 02:44:45] -rw-r--r-- 2 boinc boinc     17537 Apr 26 00:06 start_atlas.sh
[2024-04-26 02:44:45] drwxrwx--x 2 boinc boinc      4096 Apr 26 00:06 shared
[2024-04-26 02:44:45] -rw-r--r-- 2 boinc boinc    474804 Apr 26 00:06 input.tar.gz
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc         0 Apr 26 00:06 boinc_lockfile
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc      2641 Apr 26 00:06 pandaJob.out
[2024-04-26 02:44:45] -rw------- 1 boinc boinc       424 Apr 26 00:06 setup.sh.local
[2024-04-26 02:44:45] -rw------- 1 boinc boinc    993590 Apr 26 00:06 agis_schedconf.cvmfs.json
[2024-04-26 02:44:45] -rw------- 1 boinc boinc         0 Apr 26 00:06 agis_ddmendpoints.agis.ALL.json
[2024-04-26 02:44:45] -rw------- 1 boinc boinc   1315307 Apr 26 00:06 cric_ddmendpoints.json
[2024-04-26 02:44:45] drwx------ 4 boinc boinc      4096 Apr 26 00:06 pilot3
[2024-04-26 02:44:45] -rw------- 1 boinc boinc        95 Apr 26 02:43 pilot_heartbeat.json
[2024-04-26 02:44:45] -rw------- 1 boinc boinc 178844047 Apr 26 02:43 HITS.38204327._000953.pool.root.1
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc       530 Apr 26 02:44 boinc_task_state.xml
[2024-04-26 02:44:45] -rw------- 1 boinc boinc      1051 Apr 26 02:44 memory_monitor_summary.json
[2024-04-26 02:44:45] -rw------- 1 boinc boinc    276719 Apr 26 02:44 log.38204327._000953.job.log.tgz.1
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc      8192 Apr 26 02:44 boinc_mmap_file
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc        27 Apr 26 02:44 wrapper_checkpoint.txt
[2024-04-26 02:44:45] -rw------- 1 boinc boinc      7733 Apr 26 02:44 heartbeat.json
[2024-04-26 02:44:45] -rw------- 1 boinc boinc      4221 Apr 26 02:44 pilotlog.txt
[2024-04-26 02:44:45] -rw------- 1 boinc boinc    913556 Apr 26 02:44 log.38204327._000953.job.log.1
[2024-04-26 02:44:45] -rw------- 1 boinc boinc       357 Apr 26 02:44 output.list
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc       620 Apr 26 02:44 runtime_log
[2024-04-26 02:44:45] -rw------- 1 boinc boinc   1208320 Apr 26 02:44 result.tar.gz
[2024-04-26 02:44:45] -rw------- 1 boinc boinc       656 Apr 26 02:44 RSzKDmssyH5n9Rq4apoT9bVoABFKDmABFKDmtztZDmbYIKDmULG4pn.diag
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc     11409 Apr 26 02:44 runtime_log.err
[2024-04-26 02:44:45] -rw-r--r-- 1 boinc boinc     21068 Apr 26 02:44 stderr.txt
[2024-04-26 02:44:45] HITS file was successfully produced:
[2024-04-26 02:44:45] -rw------- 1 boinc boinc 178844047 Apr 26 02:43 shared/HITS.pool.root.1
[2024-04-26 02:44:45]  *** Contents of shared directory: ***
[2024-04-26 02:44:45] total 681560
[2024-04-26 02:44:45] -rw-r--r-- 2 boinc boinc 517356226 Apr 26 00:06 ATLAS.root_0
[2024-04-26 02:44:45] -rw-r--r-- 2 boinc boinc     17537 Apr 26 00:06 start_atlas.sh
[2024-04-26 02:44:45] -rw-r--r-- 2 boinc boinc    474804 Apr 26 00:06 input.tar.gz
[2024-04-26 02:44:45] -rw------- 1 boinc boinc 178844047 Apr 26 02:43 HITS.pool.root.1
[2024-04-26 02:44:45] -rw------- 1 boinc boinc   1208320 Apr 26 02:44 result.tar.gz
02:44:46 (3038974): run_atlas exited; CPU time 34906.539719
02:44:46 (3038974): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN