Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:30:47 (1860075): wrapper (7.7.26015): starting
09:30:47 (1860075): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 09:30:47] Arguments: --nthreads 4
[2024-04-26 09:30:47] Threads: 4
[2024-04-26 09:30:47] Checking for CVMFS
[2024-04-26 09:30:47] No cvmfs_config command found, will try listing directly
[2024-04-26 09:30:47] CVMFS is ok
[2024-04-26 09:30:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 09:30:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 09:30:47] Further information can be found at the LHC@home message board.
[2024-04-26 09:30:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 09:30:47] Checking for apptainer binary...
[2024-04-26 09:30:47] which: no apptainer in ((null))
[2024-04-26 09:30:47] apptainer is not installed, using version from CVMFS
[2024-04-26 09:30:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 09:30:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-04-26 09:30:49] apptainer works
[2024-04-26 09:30:49] Set ATHENA_PROC_NUMBER=4
[2024-04-26 09:30:49] Set ATHENA_CORE_NUMBER=4
[2024-04-26 09:30:49] Starting ATLAS job with PandaID=6177655687
[2024-04-26 09:30:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 13:12:06]  *** The last 200 lines of the pilot log: ***
[2024-04-26 13:12:06]  direct_access_wan=False
[2024-04-26 13:12:06]  domain=
[2024-04-26 13:12:06]  filesize=330326
[2024-04-26 13:12:06]  filetype=log
[2024-04-26 13:12:06]  guid=09058d55-748e-4cee-a85d-da65ce8a8d5f
[2024-04-26 13:12:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 13:12:06]  is_tar=False
[2024-04-26 13:12:06]  lfn=log.38124118._009043.job.log.tgz.1
[2024-04-26 13:12:06]  mtime=0
[2024-04-26 13:12:06]  protocol_id=None
[2024-04-26 13:12:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 13:12:06]  replicas=None
[2024-04-26 13:12:06]  scope=mc23_13p6TeV
[2024-04-26 13:12:06]  status=None
[2024-04-26 13:12:06]  status_code=0
[2024-04-26 13:12:06]  storage_token=
[2024-04-26 13:12:06]  surl=/scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6177655687/log.38124118._009043.job.log.tgz.1
[2024-04-26 13:12:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/4a/log.38124118._009043.job.log.tgz.1
[2024-04-26 13:12:06]  workdir=None
[2024-04-26 13:12:06] ]
[2024-04-26 13:12:06] 2024-04-26 11:11:43,452 | INFO     | transferring file log.38124118._009043.job.log.tgz.1 from /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6177655687/log.38124118._009043.job.log.tgz.1 to /scratch/b
[2024-04-26 13:12:06] 2024-04-26 11:11:43,452 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6177655687/log.38124118._009043.job.log.tgz.1 /scratch/boinc/var/slot16/slots/1/lo
[2024-04-26 13:12:06] 2024-04-26 11:11:43,468 | INFO     | adding to output.list: log.38124118._009043.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/4a/log.38124118._009043.job.log.tg
[2024-04-26 13:12:06] 2024-04-26 11:11:43,469 | INFO     | summary of transferred files:
[2024-04-26 13:12:06] 2024-04-26 11:11:43,469 | INFO     |  -- lfn=log.38124118._009043.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 13:12:06] 2024-04-26 11:11:43,470 | INFO     | stage-out finished correctly
[2024-04-26 13:12:06] 2024-04-26 11:11:43,501 | INFO     | monitor loop #1014: job 0:6177655687 is in state 'finished'
[2024-04-26 13:12:06] 2024-04-26 11:11:43,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 13:12:06] 2024-04-26 11:11:44,729 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 13:12:06] 2024-04-26 11:11:45,778 | INFO     | job 6177655687 has state=finished
[2024-04-26 13:12:06] 2024-04-26 11:11:45,778 | INFO     | preparing for final server update for job 6177655687 in state='finished'
[2024-04-26 13:12:06] 2024-04-26 11:11:45,778 | INFO     | this job has now completed (state=finished)
[2024-04-26 13:12:06] 2024-04-26 11:11:45,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 13:12:06] 2024-04-26 11:11:45,779 | INFO     | job 6177655687 has finished - writing final server update
[2024-04-26 13:12:06] 2024-04-26 11:11:45,779 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_344376/.job.ad'
[2024-04-26 13:12:06] 2024-04-26 11:11:45,779 | INFO     | total number of processed events: 400 (read)
[2024-04-26 13:12:06] 2024-04-26 11:11:45,782 | INFO     | executing command: lscpu
[2024-04-26 13:12:06] 2024-04-26 11:11:45,826 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 13:12:06] 2024-04-26 11:11:45,827 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 13:12:06] 2024-04-26 11:11:45,861 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 13:12:06] 2024-04-26 11:11:46,030 | INFO     | monitor loop #1015: job 0:6177655687 is in state 'finished'
[2024-04-26 13:12:06] 2024-04-26 11:11:46,030 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,532 | INFO     | monitor loop #1016: job 0:6177655687 is in state 'finished'
[2024-04-26 13:12:06] 2024-04-26 11:11:48,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,950 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 13:12:06] 2024-04-26 11:11:48,950 | INFO     | using path: /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6177655687/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,951 | INFO     | extracted standard info from prmon json
[2024-04-26 13:12:06] 2024-04-26 11:11:48,951 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 13:12:06] 2024-04-26 11:11:48,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 13:12:06] 2024-04-26 11:11:48,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 13:12:06] 2024-04-26 11:11:48,954 | INFO     | fitting pss+swap vs Time
[2024-04-26 13:12:06] 2024-04-26 11:11:48,956 | INFO     | current chi2=3.6582161861101437 (change=-0.10270628389172545 %)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,956 | INFO     | right removable region: 210
[2024-04-26 13:12:06] 2024-04-26 11:11:48,956 | INFO     | current chi2=1.342523565893459 (change=63.26344990050033 %)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,957 | INFO     | current chi2=0.1382924963686995 (change=89.69906377198936 %)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,958 | INFO     | current chi2=0.09033255929351182 (change=34.680071829293205 %)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,959 | INFO     | current chi2=0.07911273119093186 (change=12.420580342602813 %)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,959 | INFO     | left removable region: 40
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | current memory leak: -3.80 B/s (using 170 data points, chi2=0.03)
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | ..............................
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | . Timing measurements:
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | . get job = 0 s
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | . initial setup = 1 s
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | . payload setup = 11 s
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | . stage-in = 0 s
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | . payload execution = 13182 s
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | . stage-out = 1 s
[2024-04-26 13:12:06] 2024-04-26 11:11:48,960 | INFO     | . log creation = 0 s
[2024-04-26 13:12:06] 2024-04-26 11:11:48,961 | INFO     | ..............................
[2024-04-26 13:12:06] 2024-04-26 11:11:49,013 | INFO     | 
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | job summary report
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | --------------------------------------------------
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | PanDA job id: 6177655687
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | task id: 38124118
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | errors: (none)
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | pilot state: finished 
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | transexitcode: 0
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | exeerrorcode: 0
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | exeerrordiag: 
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | exitcode: 0
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | exitmsg: OK
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | cpuconsumptiontime: 49528 s
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | nevents: 400
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | neventsw: 0
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | pid: 1872369
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | pgrp: 1872369
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | corecount: 4
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | event service: False
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | sizes: {0: 2375499, 1: 2375499, 11: 2375527, 12: 2375761, 22: 2375789, 13196: 2405960, 13198: 2414942, 13200: 2414998, 13204: 2415168}
[2024-04-26 13:12:06] 2024-04-26 11:11:49,014 | INFO     | --------------------------------------------------
[2024-04-26 13:12:06] 2024-04-26 11:11:49,015 | INFO     | 
[2024-04-26 13:12:06] 2024-04-26 11:11:49,015 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-04-26 13:12:06] 2024-04-26 11:11:49,030 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 13:12:06] 2024-04-26 11:11:49,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,032 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 13:12:06] 2024-04-26 11:11:49,032 | INFO     | job 6177655687 has completed (purged errors)
[2024-04-26 13:12:06] 2024-04-26 11:11:49,032 | INFO     | overall cleanup function is called
[2024-04-26 13:12:06] 2024-04-26 11:11:50,038 | INFO     | --- collectZombieJob: --- 10, [1872369]
[2024-04-26 13:12:06] 2024-04-26 11:11:50,039 | INFO     | zombie collector waiting for pid 1872369
[2024-04-26 13:12:06] 2024-04-26 11:11:50,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 13:12:06] 2024-04-26 11:11:51,043 | INFO     | collected zombie processes
[2024-04-26 13:12:06] 2024-04-26 11:11:51,043 | INFO     | will now attempt to kill all subprocesses of pid=1872369
[2024-04-26 13:12:06] 2024-04-26 11:11:51,194 | INFO     | process IDs to be killed: [1872369] (in reverse order)
[2024-04-26 13:12:06] 2024-04-26 11:11:51,288 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 13:12:06] 2024-04-26 11:11:51,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 13:12:06] 2024-04-26 11:11:51,295 | INFO     | did not find any defunct processes belonging to 1872369
[2024-04-26 13:12:06] 2024-04-26 11:11:51,300 | INFO     | did not find any defunct processes belonging to 1872369
[2024-04-26 13:12:06] 2024-04-26 11:11:51,300 | INFO     | ready for new job
[2024-04-26 13:12:06] 2024-04-26 11:11:51,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 13:12:06] 2024-04-26 11:11:51,302 | INFO     | *************************************
[2024-04-26 13:12:06] 2024-04-26 11:11:51,302 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 13:12:06] 2024-04-26 11:11:51,302 | INFO     | *************************************
[2024-04-26 13:12:06] 2024-04-26 11:11:51,302 | INFO     | 
[2024-04-26 13:12:06] 2024-04-26 11:11:51,305 | INFO     | architecture information:
[2024-04-26 13:12:06] 2024-04-26 11:11:51,305 | INFO     | executing command: cat /etc/os-release
[2024-04-26 13:12:06] 2024-04-26 11:11:51,318 | INFO     | cat /etc/os-release:
[2024-04-26 13:12:06] NAME="CentOS Linux"
[2024-04-26 13:12:06] VERSION="7 (Core)"
[2024-04-26 13:12:06] ID="centos"
[2024-04-26 13:12:06] ID_LIKE="rhel fedora"
[2024-04-26 13:12:06] VERSION_ID="7"
[2024-04-26 13:12:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 13:12:06] ANSI_COLOR="0;31"
[2024-04-26 13:12:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 13:12:06] HOME_URL="https://www.centos.org/"
[2024-04-26 13:12:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 13:12:06] 
[2024-04-26 13:12:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 13:12:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 13:12:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 13:12:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 13:12:06] 
[2024-04-26 13:12:06] 2024-04-26 11:11:51,318 | INFO     | *************************************
[2024-04-26 13:12:06] 2024-04-26 11:11:51,821 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-04-26 13:12:06] 2024-04-26 11:11:51,842 | INFO     | sufficient remaining disk space (612118822912 B)
[2024-04-26 13:12:06] 2024-04-26 11:11:51,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 13:12:06] 2024-04-26 11:11:51,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 13:12:06] 2024-04-26 11:11:51,843 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 13:12:06] 2024-04-26 11:11:51,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 13:12:06] 2024-04-26 11:11:51,843 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 13:12:06] 2024-04-26 11:11:51,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 13:12:06] 2024-04-26 11:11:51,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 13:12:06] 2024-04-26 11:11:52,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 13:12:06] 2024-04-26 11:11:52,041 | INFO     | aborting loop
[2024-04-26 13:12:06] 2024-04-26 11:11:52,555 | INFO     | all data control threads have been joined
[2024-04-26 13:12:06] 2024-04-26 11:11:52,841 | INFO     | all job control threads have been joined
[2024-04-26 13:12:06] 2024-04-26 11:11:52,847 | INFO     | [job] retrieve thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:52,954 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:53,039 | INFO     | all payload control threads have been joined
[2024-04-26 13:12:06] 2024-04-26 11:11:53,043 | INFO     | [job] job monitor thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:53,136 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:53,402 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:53,561 | INFO     | [data] control thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:53,706 | INFO     | [payload] validate_post thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:53,846 | INFO     | [job] control thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:53,848 | INFO     | [data] copytool_out thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:54,019 | INFO     | [data] copytool_in thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:54,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 13:12:06] 2024-04-26 11:11:54,044 | INFO     | [payload] control thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:54,045 | INFO     | [job] validate thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:54,282 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:54,431 | INFO     | [payload] failed_post thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:55,028 | INFO     | [job] queue monitor thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:11:55,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 13:12:06] 2024-04-26 11:11:59,293 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 13:12:06] 2024-04-26 11:12:00,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47642388649024)>', '<ExcThread(monitor, started 47642557781760)>']
[2024-04-26 13:12:06] 2024-04-26 11:12:00,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 13:12:06] 2024-04-26 11:12:00,889 | INFO     | [monitor] control thread has ended
[2024-04-26 13:12:06] 2024-04-26 11:12:05,581 | INFO     | all workflow threads have been joined
[2024-04-26 13:12:06] 2024-04-26 11:12:05,582 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 13:12:06] 2024-04-26 11:12:05,582 | INFO     | traces error code: 0
[2024-04-26 13:12:06] 2024-04-26 11:12:05,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 13:12:06] 2024-04-26 11:12:05,659 [wrapper] ==== pilot stdout END ====
[2024-04-26 13:12:06] 2024-04-26 11:12:05,665 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 13:12:06] 2024-04-26 11:12:05,667 [wrapper] pilotpid: 1864622
[2024-04-26 13:12:06] 2024-04-26 11:12:05,669 [wrapper] Pilot exit status: 0
[2024-04-26 13:12:06] 2024-04-26 11:12:05,677 [wrapper] pandaids: 6177655687
[2024-04-26 13:12:06] 2024-04-26 11:12:05,733 [wrapper] cleanup: SIGTERM to supervisor_pilot 2498424 1864623
[2024-04-26 13:12:06] 2024-04-26 11:12:05,736 [wrapper] Test setup, not cleaning
[2024-04-26 13:12:06] 2024-04-26 11:12:05,738 [wrapper] ==== wrapper stdout END ====
[2024-04-26 13:12:06] 2024-04-26 11:12:05,740 [wrapper] ==== wrapper stderr END ====
[2024-04-26 13:12:06] 2024-04-26 11:12:05,744 [wrapper] apfmon messages muted
[2024-04-26 13:12:06]  *** Error codes and diagnostics ***
[2024-04-26 13:12:06]     "exeErrorCode": 0,
[2024-04-26 13:12:06]     "exeErrorDiag": "",
[2024-04-26 13:12:06]     "pilotErrorCode": 0,
[2024-04-26 13:12:06]     "pilotErrorDiag": "",
[2024-04-26 13:12:06]  *** Listing of results directory ***
[2024-04-26 13:12:06] total 717096
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc    462745 Apr 16 18:04 pilot3.tar.gz
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc      6185 Apr 16 18:43 queuedata.json
[2024-04-26 13:12:06] -rwx------ 1 boinc boinc     32211 Apr 16 18:43 runpilot2-wrapper.sh
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc       100 Apr 26 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 13:12:06] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 09:30 run_atlas
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc       105 Apr 26 09:30 job.xml
[2024-04-26 13:12:06] -rw-r--r-- 2 boinc boinc 517406891 Apr 26 09:30 EVNT.38124116._000361.pool.root.1
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc      6662 Apr 26 09:30 init_data.xml
[2024-04-26 13:12:06] -rw-r--r-- 2 boinc boinc     17537 Apr 26 09:30 start_atlas.sh
[2024-04-26 13:12:06] drwxrwx--x 2 boinc boinc      4096 Apr 26 09:30 shared
[2024-04-26 13:12:06] -rw-r--r-- 2 boinc boinc    474741 Apr 26 09:30 input.tar.gz
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc         0 Apr 26 09:30 boinc_lockfile
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc      2520 Apr 26 09:30 pandaJob.out
[2024-04-26 13:12:06] -rw------- 1 boinc boinc       424 Apr 26 09:30 setup.sh.local
[2024-04-26 13:12:06] -rw------- 1 boinc boinc    993582 Apr 26 09:31 agis_schedconf.cvmfs.json
[2024-04-26 13:12:06] -rw------- 1 boinc boinc   1315307 Apr 26 09:31 cric_ddmendpoints.json
[2024-04-26 13:12:06] drwx------ 4 boinc boinc      4096 Apr 26 09:31 pilot3
[2024-04-26 13:12:06] -rw------- 1 boinc boinc 210261102 Apr 26 13:11 HITS.38124118._009043.pool.root.1
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc       532 Apr 26 13:11 boinc_task_state.xml
[2024-04-26 13:12:06] -rw------- 1 boinc boinc      1052 Apr 26 13:11 memory_monitor_summary.json
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc      8192 Apr 26 13:11 boinc_mmap_file
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc        28 Apr 26 13:11 wrapper_checkpoint.txt
[2024-04-26 13:12:06] -rw------- 1 boinc boinc         0 Apr 26 13:11 agis_ddmendpoints.agis.ALL.json
[2024-04-26 13:12:06] -rw------- 1 boinc boinc    330326 Apr 26 13:11 log.38124118._009043.job.log.tgz.1
[2024-04-26 13:12:06] -rw------- 1 boinc boinc      7749 Apr 26 13:11 heartbeat.json
[2024-04-26 13:12:06] -rw------- 1 boinc boinc        95 Apr 26 13:11 pilot_heartbeat.json
[2024-04-26 13:12:06] -rw------- 1 boinc boinc      4344 Apr 26 13:12 pilotlog.txt
[2024-04-26 13:12:06] -rw------- 1 boinc boinc   1242772 Apr 26 13:12 log.38124118._009043.job.log.1
[2024-04-26 13:12:06] -rw------- 1 boinc boinc       357 Apr 26 13:12 output.list
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc       620 Apr 26 13:12 runtime_log
[2024-04-26 13:12:06] -rw------- 1 boinc boinc   1597440 Apr 26 13:12 result.tar.gz
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc     11410 Apr 26 13:12 runtime_log.err
[2024-04-26 13:12:06] -rw------- 1 boinc boinc       658 Apr 26 13:12 jhBODmM50G5nfZGDcpSWOuwoABFKDmABFKDmtxRSDmhkFKDmuxZzMn.diag
[2024-04-26 13:12:06] -rw-r--r-- 1 boinc boinc     21200 Apr 26 13:12 stderr.txt
[2024-04-26 13:12:06] HITS file was successfully produced:
[2024-04-26 13:12:06] -rw------- 1 boinc boinc 210261102 Apr 26 13:11 shared/HITS.pool.root.1
[2024-04-26 13:12:06]  *** Contents of shared directory: ***
[2024-04-26 13:12:06] total 712672
[2024-04-26 13:12:06] -rw-r--r-- 2 boinc boinc 517406891 Apr 26 09:30 ATLAS.root_0
[2024-04-26 13:12:06] -rw-r--r-- 2 boinc boinc     17537 Apr 26 09:30 start_atlas.sh
[2024-04-26 13:12:06] -rw-r--r-- 2 boinc boinc    474741 Apr 26 09:30 input.tar.gz
[2024-04-26 13:12:06] -rw------- 1 boinc boinc 210261102 Apr 26 13:11 HITS.pool.root.1
[2024-04-26 13:12:06] -rw------- 1 boinc boinc   1597440 Apr 26 13:12 result.tar.gz
13:12:07 (1860075): run_atlas exited; CPU time 49235.571207
13:12:07 (1860075): called boinc_finish(0)

</stderr_txt>
]]>

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