Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:41:27 (377141): wrapper (7.7.26015): starting
13:41:27 (377141): wrapper: running run_atlas (--nthreads 4)
[2024-04-25 13:41:27] Arguments: --nthreads 4
[2024-04-25 13:41:27] Threads: 4
[2024-04-25 13:41:27] Checking for CVMFS
[2024-04-25 13:41:27] No cvmfs_config command found, will try listing directly
[2024-04-25 13:41:27] CVMFS is ok
[2024-04-25 13:41:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-25 13:41:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-25 13:41:27] Further information can be found at the LHC@home message board.
[2024-04-25 13:41:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-25 13:41:27] Checking for apptainer binary...
[2024-04-25 13:41:27] which: no apptainer in ((null))
[2024-04-25 13:41:27] apptainer is not installed, using version from CVMFS
[2024-04-25 13:41:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-25 13:41:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-04-25 13:41:28] apptainer works
[2024-04-25 13:41:28] Set ATHENA_PROC_NUMBER=4
[2024-04-25 13:41:28] Set ATHENA_CORE_NUMBER=4
[2024-04-25 13:41:28] Starting ATLAS job with PandaID=6181504329
[2024-04-25 13:41:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-25 16:48:06]  *** The last 200 lines of the pilot log: ***
[2024-04-25 16:48:06]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-25 16:48:06]  direct_access_lan=False
[2024-04-25 16:48:06]  direct_access_wan=False
[2024-04-25 16:48:06]  domain=
[2024-04-25 16:48:06]  filesize=315359
[2024-04-25 16:48:06]  filetype=log
[2024-04-25 16:48:06]  guid=7148ae38-e84d-4851-9003-4be154005506
[2024-04-25 16:48:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-25 16:48:06]  is_tar=False
[2024-04-25 16:48:06]  lfn=log.38106711._020561.job.log.tgz.1
[2024-04-25 16:48:06]  mtime=0
[2024-04-25 16:48:06]  protocol_id=None
[2024-04-25 16:48:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-25 16:48:06]  replicas=None
[2024-04-25 16:48:06]  scope=mc23_13p6TeV
[2024-04-25 16:48:06]  status=None
[2024-04-25 16:48:06]  status_code=0
[2024-04-25 16:48:06]  storage_token=
[2024-04-25 16:48:06]  surl=/scratch/boinc/var/slot72/slots/1/PanDA_Pilot-6181504329/log.38106711._020561.job.log.tgz.1
[2024-04-25 16:48:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/ce/log.38106711._020561.job.log.tgz.1
[2024-04-25 16:48:06]  workdir=None
[2024-04-25 16:48:06] ]
[2024-04-25 16:48:06] 2024-04-25 14:47:40,331 | INFO     | transferring file log.38106711._020561.job.log.tgz.1 from /scratch/boinc/var/slot72/slots/1/PanDA_Pilot-6181504329/log.38106711._020561.job.log.tgz.1 to /scratch/b
[2024-04-25 16:48:06] 2024-04-25 14:47:40,332 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot72/slots/1/PanDA_Pilot-6181504329/log.38106711._020561.job.log.tgz.1 /scratch/boinc/var/slot72/slots/1/lo
[2024-04-25 16:48:06] 2024-04-25 14:47:40,347 | INFO     | adding to output.list: log.38106711._020561.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/ce/log.38106711._020561.job.log.tg
[2024-04-25 16:48:06] 2024-04-25 14:47:40,348 | INFO     | summary of transferred files:
[2024-04-25 16:48:06] 2024-04-25 14:47:40,348 | INFO     |  -- lfn=log.38106711._020561.job.log.tgz.1, status_code=0, status=transferred
[2024-04-25 16:48:06] 2024-04-25 14:47:40,348 | INFO     | stage-out finished correctly
[2024-04-25 16:48:06] 2024-04-25 14:47:40,439 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-25 16:48:06] 2024-04-25 14:47:40,993 | INFO     | job 6181504329 has state=finished
[2024-04-25 16:48:06] 2024-04-25 14:47:40,993 | INFO     | preparing for final server update for job 6181504329 in state='finished'
[2024-04-25 16:48:06] 2024-04-25 14:47:40,994 | INFO     | this job has now completed (state=finished)
[2024-04-25 16:48:06] 2024-04-25 14:47:40,994 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-25 16:48:06] 2024-04-25 14:47:40,994 | INFO     | job 6181504329 has finished - writing final server update
[2024-04-25 16:48:06] 2024-04-25 14:47:40,994 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_495636/.job.ad'
[2024-04-25 16:48:06] 2024-04-25 14:47:40,994 | INFO     | total number of processed events: 400 (read)
[2024-04-25 16:48:06] 2024-04-25 14:47:41,000 | INFO     | executing command: lscpu
[2024-04-25 16:48:06] 2024-04-25 14:47:41,050 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-25 16:48:06] 2024-04-25 14:47:41,051 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-25 16:48:06] 2024-04-25 14:47:41,086 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-25 16:48:06] 2024-04-25 14:47:45,367 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-25 16:48:06] 2024-04-25 14:47:45,368 | INFO     | using path: /scratch/boinc/var/slot72/slots/1/PanDA_Pilot-6181504329/memory_monitor_summary.json (trf name=prmon)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,374 | INFO     | extracted standard info from prmon json
[2024-04-25 16:48:06] 2024-04-25 14:47:45,375 | INFO     | extracted standard memory fields from prmon json
[2024-04-25 16:48:06] 2024-04-25 14:47:45,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-25 16:48:06] 2024-04-25 14:47:45,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-25 16:48:06] 2024-04-25 14:47:45,380 | INFO     | fitting pss+swap vs Time
[2024-04-25 16:48:06] 2024-04-25 14:47:45,382 | INFO     | current chi2=5.2926726589008055 (change=0.09349983959699906 %)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,383 | INFO     | right removable region: 177
[2024-04-25 16:48:06] 2024-04-25 14:47:45,384 | INFO     | current chi2=2.491237089039414 (change=52.9744621146836 %)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,385 | INFO     | current chi2=0.9761264578546079 (change=60.817600936128144 %)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,386 | INFO     | current chi2=0.006380875563523591 (change=99.3463064634527 %)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,387 | INFO     | current chi2=0.002192569568487889 (change=65.63842145705271 %)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,388 | INFO     | current chi2=0.001863955610912034 (change=14.987618285812667 %)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,388 | INFO     | left removable region: 50
[2024-04-25 16:48:06] 2024-04-25 14:47:45,388 | INFO     | current memory leak: 1.13 B/s (using 127 data points, chi2=0.00)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | ..............................
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | . Timing measurements:
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | . get job = 0 s
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | . initial setup = 1 s
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | . payload setup = 6 s
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | . stage-in = 0 s
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | . payload execution = 11135 s
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | . stage-out = 0 s
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | . log creation = 0 s
[2024-04-25 16:48:06] 2024-04-25 14:47:45,389 | INFO     | ..............................
[2024-04-25 16:48:06] 2024-04-25 14:47:45,453 | INFO     | 
[2024-04-25 16:48:06] 2024-04-25 14:47:45,453 | INFO     | job summary report
[2024-04-25 16:48:06] 2024-04-25 14:47:45,453 | INFO     | --------------------------------------------------
[2024-04-25 16:48:06] 2024-04-25 14:47:45,453 | INFO     | PanDA job id: 6181504329
[2024-04-25 16:48:06] 2024-04-25 14:47:45,453 | INFO     | task id: 38106711
[2024-04-25 16:48:06] 2024-04-25 14:47:45,453 | INFO     | errors: (none)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | pilot state: finished 
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | transexitcode: 0
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | exeerrorcode: 0
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | exeerrordiag: 
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | exitcode: 0
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | exitmsg: OK
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | cpuconsumptiontime: 40980 s
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | nevents: 400
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | neventsw: 0
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | pid: 394297
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | pgrp: 394297
[2024-04-25 16:48:06] 2024-04-25 14:47:45,454 | INFO     | corecount: 4
[2024-04-25 16:48:06] 2024-04-25 14:47:45,455 | INFO     | event service: False
[2024-04-25 16:48:06] 2024-04-25 14:47:45,455 | INFO     | sizes: {0: 2375613, 1: 2375613, 5: 2375847, 11: 2375903, 11144: 2404998, 11145: 2414164, 11150: 2414278}
[2024-04-25 16:48:06] 2024-04-25 14:47:45,455 | INFO     | --------------------------------------------------
[2024-04-25 16:48:06] 2024-04-25 14:47:45,455 | INFO     | 
[2024-04-25 16:48:06] 2024-04-25 14:47:45,455 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/1
[2024-04-25 16:48:06] 2024-04-25 14:47:45,620 | WARNING  | process 394297 is no longer using CPU - aborting
[2024-04-25 16:48:06] 2024-04-25 14:47:45,621 | INFO     | aborting job monitoring since job object (job id=6181504329) has expired
[2024-04-25 16:48:06] 2024-04-25 14:47:45,643 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,643 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,643 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,643 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | job 6181504329 has completed (purged errors)
[2024-04-25 16:48:06] 2024-04-25 14:47:45,644 | INFO     | overall cleanup function is called
[2024-04-25 16:48:06] 2024-04-25 14:47:46,651 | INFO     | --- collectZombieJob: --- 10, [394297]
[2024-04-25 16:48:06] 2024-04-25 14:47:46,652 | INFO     | zombie collector waiting for pid 394297
[2024-04-25 16:48:06] 2024-04-25 14:47:46,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-25 16:48:06] 2024-04-25 14:47:47,656 | INFO     | collected zombie processes
[2024-04-25 16:48:06] 2024-04-25 14:47:47,657 | INFO     | will now attempt to kill all subprocesses of pid=394297
[2024-04-25 16:48:06] 2024-04-25 14:47:47,920 | INFO     | process IDs to be killed: [394297] (in reverse order)
[2024-04-25 16:48:06] 2024-04-25 14:47:48,144 | WARNING  | found no corresponding commands to process id(s)
[2024-04-25 16:48:06] 2024-04-25 14:47:48,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-25 16:48:06] 2024-04-25 14:47:48,158 | INFO     | did not find any defunct processes belonging to 394297
[2024-04-25 16:48:06] 2024-04-25 14:47:48,168 | INFO     | did not find any defunct processes belonging to 394297
[2024-04-25 16:48:06] 2024-04-25 14:47:48,168 | INFO     | ready for new job
[2024-04-25 16:48:06] 2024-04-25 14:47:48,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-25 16:48:06] 2024-04-25 14:47:48,170 | INFO     | *************************************
[2024-04-25 16:48:06] 2024-04-25 14:47:48,170 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-25 16:48:06] 2024-04-25 14:47:48,170 | INFO     | *************************************
[2024-04-25 16:48:06] 2024-04-25 14:47:48,170 | INFO     | 
[2024-04-25 16:48:06] 2024-04-25 14:47:48,176 | INFO     | architecture information:
[2024-04-25 16:48:06] 2024-04-25 14:47:48,176 | INFO     | executing command: cat /etc/os-release
[2024-04-25 16:48:06] 2024-04-25 14:47:48,190 | INFO     | cat /etc/os-release:
[2024-04-25 16:48:06] NAME="CentOS Linux"
[2024-04-25 16:48:06] VERSION="7 (Core)"
[2024-04-25 16:48:06] ID="centos"
[2024-04-25 16:48:06] ID_LIKE="rhel fedora"
[2024-04-25 16:48:06] VERSION_ID="7"
[2024-04-25 16:48:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-25 16:48:06] ANSI_COLOR="0;31"
[2024-04-25 16:48:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-25 16:48:06] HOME_URL="https://www.centos.org/"
[2024-04-25 16:48:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-25 16:48:06] 
[2024-04-25 16:48:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-25 16:48:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-25 16:48:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-25 16:48:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-25 16:48:06] 
[2024-04-25 16:48:06] 2024-04-25 14:47:48,190 | INFO     | *************************************
[2024-04-25 16:48:06] 2024-04-25 14:47:48,693 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/1
[2024-04-25 16:48:06] 2024-04-25 14:47:48,718 | INFO     | sufficient remaining disk space (3051717918720 B)
[2024-04-25 16:48:06] 2024-04-25 14:47:48,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-25 16:48:06] 2024-04-25 14:47:48,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-25 16:48:06] 2024-04-25 14:47:48,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-25 16:48:06] 2024-04-25 14:47:48,720 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-25 16:48:06] 2024-04-25 14:47:48,720 | INFO     | all job control threads have been joined
[2024-04-25 16:48:06] 2024-04-25 14:47:48,721 | INFO     | found 0 job(s) in 20 queues
[2024-04-25 16:48:06] 2024-04-25 14:47:48,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-25 16:48:06] 2024-04-25 14:47:48,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-25 16:48:06] 2024-04-25 14:47:49,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-25 16:48:06] 2024-04-25 14:47:49,127 | INFO     | aborting loop
[2024-04-25 16:48:06] 2024-04-25 14:47:49,431 | INFO     | all data control threads have been joined
[2024-04-25 16:48:06] 2024-04-25 14:47:49,725 | INFO     | [job] retrieve thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:49,727 | INFO     | [job] control thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:49,814 | INFO     | [job] create_data_payload thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:49,839 | INFO     | all payload control threads have been joined
[2024-04-25 16:48:06] 2024-04-25 14:47:50,001 | INFO     | [job] validate thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,100 | INFO     | [payload] validate_post thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,126 | INFO     | [payload] failed_post thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,131 | INFO     | [job] job monitor thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,436 | INFO     | [data] control thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-25 16:48:06] 2024-04-25 14:47:50,500 | INFO     | [data] copytool_in thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,503 | INFO     | [payload] validate_pre thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,728 | INFO     | [data] copytool_out thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,844 | INFO     | [payload] control thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:50,928 | INFO     | [payload] execute_payloads thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:51,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-25 16:48:06] 2024-04-25 14:47:51,467 | INFO     | [job] queue monitor thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:55,037 | INFO     | [data] queue_monitor thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:47:59,332 | INFO     | job.realtimelogging is not enabled
[2024-04-25 16:48:06] 2024-04-25 14:48:00,337 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-25 16:48:06] 2024-04-25 14:48:00,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47618010350656)>', '<ExcThread(monitor, started 47618319218432)>']
[2024-04-25 16:48:06] 2024-04-25 14:48:01,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-25 16:48:06] 2024-04-25 14:48:01,787 | INFO     | [monitor] control thread has ended
[2024-04-25 16:48:06] 2024-04-25 14:48:05,927 | INFO     | all workflow threads have been joined
[2024-04-25 16:48:06] 2024-04-25 14:48:05,928 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-25 16:48:06] 2024-04-25 14:48:05,928 | INFO     | traces error code: 0
[2024-04-25 16:48:06] 2024-04-25 14:48:05,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-25 16:48:06] 2024-04-25 14:48:05,998 [wrapper] ==== pilot stdout END ====
[2024-04-25 16:48:06] 2024-04-25 14:48:06,001 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-25 16:48:06] 2024-04-25 14:48:06,003 [wrapper] pilotpid: 381753
[2024-04-25 16:48:06] 2024-04-25 14:48:06,006 [wrapper] Pilot exit status: 0
[2024-04-25 16:48:06] 2024-04-25 14:48:06,014 [wrapper] pandaids: 6181504329
[2024-04-25 16:48:06] 2024-04-25 14:48:06,111 [wrapper] cleanup: SIGTERM to supervisor_pilot 1510834 381754
[2024-04-25 16:48:06] 2024-04-25 14:48:06,114 [wrapper] Test setup, not cleaning
[2024-04-25 16:48:06] 2024-04-25 14:48:06,116 [wrapper] ==== wrapper stdout END ====
[2024-04-25 16:48:06] 2024-04-25 14:48:06,119 [wrapper] ==== wrapper stderr END ====
[2024-04-25 16:48:06] 2024-04-25 14:48:06,124 [wrapper] apfmon messages muted
[2024-04-25 16:48:06]  *** Error codes and diagnostics ***
[2024-04-25 16:48:06]     "exeErrorCode": 0,
[2024-04-25 16:48:06]     "exeErrorDiag": "",
[2024-04-25 16:48:06]     "pilotErrorCode": 0,
[2024-04-25 16:48:06]     "pilotErrorDiag": "",
[2024-04-25 16:48:06]  *** Listing of results directory ***
[2024-04-25 16:48:06] total 725316
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc    462745 Apr 20 22:23 pilot3.tar.gz
[2024-04-25 16:48:06] -rwx------ 1 boinc boinc     32211 Apr 20 22:30 runpilot2-wrapper.sh
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc      6720 Apr 20 22:30 queuedata.json
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc       100 Apr 25 13:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-25 16:48:06] -rwxr-xr-x 1 boinc boinc      7986 Apr 25 13:41 run_atlas
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc       105 Apr 25 13:41 job.xml
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc      6643 Apr 25 13:41 init_data.xml
[2024-04-25 16:48:06] -rw-r--r-- 2 boinc boinc 520689405 Apr 25 13:41 EVNT.38106708._000253.pool.root.1
[2024-04-25 16:48:06] -rw-r--r-- 2 boinc boinc     17537 Apr 25 13:41 start_atlas.sh
[2024-04-25 16:48:06] drwxrwx--x 2 boinc boinc      4096 Apr 25 13:41 shared
[2024-04-25 16:48:06] -rw-r--r-- 2 boinc boinc    474790 Apr 25 13:41 input.tar.gz
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc         0 Apr 25 13:41 boinc_lockfile
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc      2534 Apr 25 13:41 pandaJob.out
[2024-04-25 16:48:06] -rw------- 1 boinc boinc       424 Apr 25 13:41 setup.sh.local
[2024-04-25 16:48:06] -rw------- 1 boinc boinc    989869 Apr 25 13:41 agis_schedconf.cvmfs.json
[2024-04-25 16:48:06] -rw------- 1 boinc boinc   1315307 Apr 25 13:41 cric_ddmendpoints.json
[2024-04-25 16:48:06] drwx------ 4 boinc boinc      4096 Apr 25 13:41 pilot3
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc       531 Apr 25 16:47 boinc_task_state.xml
[2024-04-25 16:48:06] -rw------- 1 boinc boinc 215823745 Apr 25 16:47 HITS.38106711._020561.pool.root.1
[2024-04-25 16:48:06] -rw------- 1 boinc boinc        95 Apr 25 16:47 pilot_heartbeat.json
[2024-04-25 16:48:06] -rw------- 1 boinc boinc      1041 Apr 25 16:47 memory_monitor_summary.json
[2024-04-25 16:48:06] -rw------- 1 boinc boinc         0 Apr 25 16:47 agis_ddmendpoints.agis.ALL.json
[2024-04-25 16:48:06] -rw------- 1 boinc boinc    315359 Apr 25 16:47 log.38106711._020561.job.log.tgz.1
[2024-04-25 16:48:06] -rw------- 1 boinc boinc      7690 Apr 25 16:47 heartbeat.json
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc        28 Apr 25 16:47 wrapper_checkpoint.txt
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc      8192 Apr 25 16:47 boinc_mmap_file
[2024-04-25 16:48:06] -rw------- 1 boinc boinc      4417 Apr 25 16:48 pilotlog.txt
[2024-04-25 16:48:06] -rw------- 1 boinc boinc   1049701 Apr 25 16:48 log.38106711._020561.job.log.1
[2024-04-25 16:48:06] -rw------- 1 boinc boinc       357 Apr 25 16:48 output.list
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc       620 Apr 25 16:48 runtime_log
[2024-04-25 16:48:06] -rw------- 1 boinc boinc   1382400 Apr 25 16:48 result.tar.gz
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc     11410 Apr 25 16:48 runtime_log.err
[2024-04-25 16:48:06] -rw------- 1 boinc boinc       658 Apr 25 16:48 65lMDmnWWI5nsSi4apGgGQJmABFKDmABFKDmRLXKDmATLKDmSYsj9m.diag
[2024-04-25 16:48:06] -rw-r--r-- 1 boinc boinc     20937 Apr 25 16:48 stderr.txt
[2024-04-25 16:48:06] HITS file was successfully produced:
[2024-04-25 16:48:06] -rw------- 1 boinc boinc 215823745 Apr 25 16:47 shared/HITS.pool.root.1
[2024-04-25 16:48:06]  *** Contents of shared directory: ***
[2024-04-25 16:48:06] total 721100
[2024-04-25 16:48:06] -rw-r--r-- 2 boinc boinc 520689405 Apr 25 13:41 ATLAS.root_0
[2024-04-25 16:48:06] -rw-r--r-- 2 boinc boinc     17537 Apr 25 13:41 start_atlas.sh
[2024-04-25 16:48:06] -rw-r--r-- 2 boinc boinc    474790 Apr 25 13:41 input.tar.gz
[2024-04-25 16:48:06] -rw------- 1 boinc boinc 215823745 Apr 25 16:47 HITS.pool.root.1
[2024-04-25 16:48:06] -rw------- 1 boinc boinc   1382400 Apr 25 16:48 result.tar.gz
16:48:08 (377141): run_atlas exited; CPU time 40706.673035
16:48:08 (377141): called boinc_finish(0)

</stderr_txt>
]]>

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