Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:36:58 (2363504): wrapper (7.7.26015): starting
03:36:58 (2363504): wrapper: running run_atlas (--nthreads 4)
[2024-04-26 03:36:58] Arguments: --nthreads 4
[2024-04-26 03:36:58] Threads: 4
[2024-04-26 03:36:58] Checking for CVMFS
[2024-04-26 03:36:58] No cvmfs_config command found, will try listing directly
[2024-04-26 03:36:58] CVMFS is ok
[2024-04-26 03:36:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-26 03:36:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-26 03:36:58] Further information can be found at the LHC@home message board.
[2024-04-26 03:36:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-26 03:36:58] Checking for apptainer binary...
[2024-04-26 03:36:58] which: no apptainer in ((null))
[2024-04-26 03:36:58] apptainer is not installed, using version from CVMFS
[2024-04-26 03:36:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-26 03:36:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-04-26 03:36:59] apptainer works
[2024-04-26 03:36:59] Set ATHENA_PROC_NUMBER=4
[2024-04-26 03:36:59] Set ATHENA_CORE_NUMBER=4
[2024-04-26 03:36:59] Starting ATLAS job with PandaID=6181490621
[2024-04-26 03:36:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 06:43:21]  *** The last 200 lines of the pilot log: ***
[2024-04-26 06:43:21]  ddm_activity=['write_lan', 'write_wan']
[2024-04-26 06:43:21]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-26 06:43:21]  direct_access_lan=False
[2024-04-26 06:43:21]  direct_access_wan=False
[2024-04-26 06:43:21]  domain=
[2024-04-26 06:43:21]  filesize=310526
[2024-04-26 06:43:21]  filetype=log
[2024-04-26 06:43:21]  guid=850f63cf-3b64-4388-9a90-43756397fa55
[2024-04-26 06:43:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 06:43:21]  is_tar=False
[2024-04-26 06:43:21]  lfn=log.38204327._001282.job.log.tgz.1
[2024-04-26 06:43:21]  mtime=0
[2024-04-26 06:43:21]  protocol_id=None
[2024-04-26 06:43:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 06:43:21]  replicas=None
[2024-04-26 06:43:21]  scope=mc23_13p6TeV
[2024-04-26 06:43:21]  status=None
[2024-04-26 06:43:21]  status_code=0
[2024-04-26 06:43:21]  storage_token=
[2024-04-26 06:43:21]  surl=/scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6181490621/log.38204327._001282.job.log.tgz.1
[2024-04-26 06:43:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/ee/log.38204327._001282.job.log.tgz.1
[2024-04-26 06:43:21]  workdir=None
[2024-04-26 06:43:21] ]
[2024-04-26 06:43:21] 2024-04-26 04:42:59,198 | INFO     | transferring file log.38204327._001282.job.log.tgz.1 from /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6181490621/log.38204327._001282.job.log.tgz.1 to /scratch/b
[2024-04-26 06:43:21] 2024-04-26 04:42:59,198 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6181490621/log.38204327._001282.job.log.tgz.1 /scratch/boinc/var/slot28/slots/0/lo
[2024-04-26 06:43:21] 2024-04-26 04:42:59,218 | INFO     | adding to output.list: log.38204327._001282.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/ee/log.38204327._001282.job.log.tg
[2024-04-26 06:43:21] 2024-04-26 04:42:59,219 | INFO     | summary of transferred files:
[2024-04-26 06:43:21] 2024-04-26 04:42:59,219 | INFO     |  -- lfn=log.38204327._001282.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 06:43:21] 2024-04-26 04:42:59,219 | INFO     | stage-out finished correctly
[2024-04-26 06:43:21] 2024-04-26 04:42:59,275 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 06:43:21] 2024-04-26 04:42:59,512 | INFO     | monitor loop #845: job 0:6181490621 is in state 'finished'
[2024-04-26 06:43:21] 2024-04-26 04:42:59,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 06:43:21] 2024-04-26 04:43:01,263 | INFO     | job 6181490621 has state=finished
[2024-04-26 06:43:21] 2024-04-26 04:43:01,263 | INFO     | preparing for final server update for job 6181490621 in state='finished'
[2024-04-26 06:43:21] 2024-04-26 04:43:01,264 | INFO     | this job has now completed (state=finished)
[2024-04-26 06:43:21] 2024-04-26 04:43:01,264 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 06:43:21] 2024-04-26 04:43:01,264 | INFO     | job 6181490621 has finished - writing final server update
[2024-04-26 06:43:21] 2024-04-26 04:43:01,264 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_691412/.job.ad'
[2024-04-26 06:43:21] 2024-04-26 04:43:01,264 | INFO     | total number of processed events: 400 (read)
[2024-04-26 06:43:21] 2024-04-26 04:43:01,267 | INFO     | executing command: lscpu
[2024-04-26 06:43:21] 2024-04-26 04:43:01,309 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-26 06:43:21] 2024-04-26 04:43:01,310 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 06:43:21] 2024-04-26 04:43:01,345 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 06:43:21] 2024-04-26 04:43:02,016 | INFO     | monitor loop #846: job 0:6181490621 is in state 'finished'
[2024-04-26 06:43:21] 2024-04-26 04:43:02,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,356 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-26 06:43:21] 2024-04-26 04:43:04,356 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6181490621/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,357 | INFO     | extracted standard info from prmon json
[2024-04-26 06:43:21] 2024-04-26 04:43:04,357 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 06:43:21] 2024-04-26 04:43:04,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 06:43:21] 2024-04-26 04:43:04,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 06:43:21] 2024-04-26 04:43:04,360 | INFO     | fitting pss+swap vs Time
[2024-04-26 06:43:21] 2024-04-26 04:43:04,361 | INFO     | current chi2=4.1335844613776 (change=16.360859869094348 %)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,362 | INFO     | right removable region: 177
[2024-04-26 06:43:21] 2024-04-26 04:43:04,362 | INFO     | current chi2=2.432166436040711 (change=50.78743127994555 %)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,363 | INFO     | current chi2=0.9423630832891393 (change=61.254169561553574 %)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,364 | INFO     | current chi2=0.8555689689539123 (change=9.210262570164424 %)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,364 | INFO     | left removable region: 30
[2024-04-26 06:43:21] 2024-04-26 04:43:04,364 | INFO     | current memory leak: 1.57 B/s (using 147 data points, chi2=0.00)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | ..............................
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | . Timing measurements:
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | . get job = 0 s
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | . initial setup = 1 s
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | . payload setup = 5 s
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | . stage-in = 0 s
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | . payload execution = 11122 s
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | . stage-out = 0 s
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | . log creation = 0 s
[2024-04-26 06:43:21] 2024-04-26 04:43:04,365 | INFO     | ..............................
[2024-04-26 06:43:21] 2024-04-26 04:43:04,491 | INFO     | 
[2024-04-26 06:43:21] 2024-04-26 04:43:04,491 | INFO     | job summary report
[2024-04-26 06:43:21] 2024-04-26 04:43:04,491 | INFO     | --------------------------------------------------
[2024-04-26 06:43:21] 2024-04-26 04:43:04,491 | INFO     | PanDA job id: 6181490621
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | task id: 38204327
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | errors: (none)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | pilot state: finished 
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | transexitcode: 0
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | exeerrorcode: 0
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | exeerrordiag: 
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | exitcode: 0
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | exitmsg: OK
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | cpuconsumptiontime: 41414 s
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | nevents: 400
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | neventsw: 0
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | pid: 2374998
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | pgrp: 2374998
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | corecount: 4
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | event service: False
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | sizes: {0: 2375705, 4: 2375911, 11: 2375939, 11131: 2405050, 11132: 2414088, 11137: 2414202}
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | --------------------------------------------------
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | 
[2024-04-26 06:43:21] 2024-04-26 04:43:04,492 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-04-26 06:43:21] 2024-04-26 04:43:04,516 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,516 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,516 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,516 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | job 6181490621 has completed (purged errors)
[2024-04-26 06:43:21] 2024-04-26 04:43:04,517 | INFO     | overall cleanup function is called
[2024-04-26 06:43:21] 2024-04-26 04:43:05,523 | INFO     | --- collectZombieJob: --- 10, [2374998]
[2024-04-26 06:43:21] 2024-04-26 04:43:05,524 | INFO     | zombie collector waiting for pid 2374998
[2024-04-26 06:43:21] 2024-04-26 04:43:05,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 06:43:21] 2024-04-26 04:43:06,528 | INFO     | collected zombie processes
[2024-04-26 06:43:21] 2024-04-26 04:43:06,528 | INFO     | will now attempt to kill all subprocesses of pid=2374998
[2024-04-26 06:43:21] 2024-04-26 04:43:06,675 | INFO     | process IDs to be killed: [2374998] (in reverse order)
[2024-04-26 06:43:21] 2024-04-26 04:43:06,768 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 06:43:21] 2024-04-26 04:43:06,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 06:43:21] 2024-04-26 04:43:06,775 | INFO     | did not find any defunct processes belonging to 2374998
[2024-04-26 06:43:21] 2024-04-26 04:43:06,780 | INFO     | did not find any defunct processes belonging to 2374998
[2024-04-26 06:43:21] 2024-04-26 04:43:06,780 | INFO     | ready for new job
[2024-04-26 06:43:21] 2024-04-26 04:43:06,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 06:43:21] 2024-04-26 04:43:06,782 | INFO     | *************************************
[2024-04-26 06:43:21] 2024-04-26 04:43:06,782 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 06:43:21] 2024-04-26 04:43:06,782 | INFO     | *************************************
[2024-04-26 06:43:21] 2024-04-26 04:43:06,782 | INFO     | 
[2024-04-26 06:43:21] 2024-04-26 04:43:06,785 | INFO     | architecture information:
[2024-04-26 06:43:21] 2024-04-26 04:43:06,785 | INFO     | executing command: cat /etc/os-release
[2024-04-26 06:43:21] 2024-04-26 04:43:06,798 | INFO     | cat /etc/os-release:
[2024-04-26 06:43:21] NAME="CentOS Linux"
[2024-04-26 06:43:21] VERSION="7 (Core)"
[2024-04-26 06:43:21] ID="centos"
[2024-04-26 06:43:21] ID_LIKE="rhel fedora"
[2024-04-26 06:43:21] VERSION_ID="7"
[2024-04-26 06:43:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 06:43:21] ANSI_COLOR="0;31"
[2024-04-26 06:43:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 06:43:21] HOME_URL="https://www.centos.org/"
[2024-04-26 06:43:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 06:43:21] 
[2024-04-26 06:43:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 06:43:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 06:43:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 06:43:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 06:43:21] 
[2024-04-26 06:43:21] 2024-04-26 04:43:06,799 | INFO     | *************************************
[2024-04-26 06:43:21] 2024-04-26 04:43:07,302 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-04-26 06:43:21] 2024-04-26 04:43:07,318 | INFO     | sufficient remaining disk space (634424131584 B)
[2024-04-26 06:43:21] 2024-04-26 04:43:07,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 06:43:21] 2024-04-26 04:43:07,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 06:43:21] 2024-04-26 04:43:07,319 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-26 06:43:21] 2024-04-26 04:43:07,319 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 06:43:21] 2024-04-26 04:43:07,319 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 06:43:21] 2024-04-26 04:43:07,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 06:43:21] 2024-04-26 04:43:07,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 06:43:21] 2024-04-26 04:43:07,559 | INFO     | all data control threads have been joined
[2024-04-26 06:43:21] 2024-04-26 04:43:08,019 | INFO     | all job control threads have been joined
[2024-04-26 06:43:21] 2024-04-26 04:43:08,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 06:43:21] 2024-04-26 04:43:08,031 | INFO     | aborting loop
[2024-04-26 06:43:21] 2024-04-26 04:43:08,158 | INFO     | all payload control threads have been joined
[2024-04-26 06:43:21] 2024-04-26 04:43:08,323 | INFO     | [job] retrieve thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:08,371 | INFO     | [job] validate thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:08,561 | INFO     | [data] control thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:08,575 | INFO     | [payload] failed_post thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:08,716 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:08,757 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:08,915 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:09,025 | INFO     | [job] control thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:09,034 | INFO     | [payload] validate_post thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:09,035 | INFO     | [job] job monitor thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:09,163 | INFO     | [payload] control thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:09,286 | INFO     | [data] copytool_in thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:09,321 | INFO     | [data] copytool_out thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:09,429 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:09,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 06:43:21] 2024-04-26 04:43:09,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 06:43:21] 2024-04-26 04:43:10,436 | INFO     | [job] queue monitor thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:13,840 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 06:43:21] 2024-04-26 04:43:14,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47387589502016)>', '<ExcThread(monitor, started 47387764938496)>']
[2024-04-26 06:43:21] 2024-04-26 04:43:15,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 06:43:21] 2024-04-26 04:43:15,360 | INFO     | [monitor] control thread has ended
[2024-04-26 06:43:21] 2024-04-26 04:43:20,017 | INFO     | all workflow threads have been joined
[2024-04-26 06:43:21] 2024-04-26 04:43:20,017 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 06:43:21] 2024-04-26 04:43:20,017 | INFO     | traces error code: 0
[2024-04-26 06:43:21] 2024-04-26 04:43:20,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 06:43:21] 2024-04-26 04:43:20,097 [wrapper] ==== pilot stdout END ====
[2024-04-26 06:43:21] 2024-04-26 04:43:20,099 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 06:43:21] 2024-04-26 04:43:20,101 [wrapper] pilotpid: 2367919
[2024-04-26 06:43:21] 2024-04-26 04:43:20,103 [wrapper] Pilot exit status: 0
[2024-04-26 06:43:21] 2024-04-26 04:43:20,110 [wrapper] pandaids: 6181490621
[2024-04-26 06:43:21] 2024-04-26 04:43:20,173 [wrapper] cleanup: SIGTERM to supervisor_pilot 2900183 2367920
[2024-04-26 06:43:21] 2024-04-26 04:43:20,175 [wrapper] Test setup, not cleaning
[2024-04-26 06:43:21] 2024-04-26 04:43:20,177 [wrapper] ==== wrapper stdout END ====
[2024-04-26 06:43:21] 2024-04-26 04:43:20,178 [wrapper] ==== wrapper stderr END ====
[2024-04-26 06:43:21] 2024-04-26 04:43:20,182 [wrapper] apfmon messages muted
[2024-04-26 06:43:21]  *** Error codes and diagnostics ***
[2024-04-26 06:43:21]     "exeErrorCode": 0,
[2024-04-26 06:43:21]     "exeErrorDiag": "",
[2024-04-26 06:43:21]     "pilotErrorCode": 0,
[2024-04-26 06:43:21]     "pilotErrorDiag": "",
[2024-04-26 06:43:21]  *** Listing of results directory ***
[2024-04-26 06:43:21] total 692644
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc    462745 Apr 20 22:07 pilot3.tar.gz
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc      6720 Apr 20 22:14 queuedata.json
[2024-04-26 06:43:21] -rwx------ 1 boinc boinc     32211 Apr 20 22:15 runpilot2-wrapper.sh
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc       100 Apr 26 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 06:43:21] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 03:36 run_atlas
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc       105 Apr 26 03:36 job.xml
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc      6662 Apr 26 03:36 init_data.xml
[2024-04-26 06:43:21] -rw-r--r-- 2 boinc boinc 519467074 Apr 26 03:36 EVNT.38204325._000072.pool.root.1
[2024-04-26 06:43:21] -rw-r--r-- 2 boinc boinc     17537 Apr 26 03:36 start_atlas.sh
[2024-04-26 06:43:21] drwxrwx--x 2 boinc boinc      4096 Apr 26 03:36 shared
[2024-04-26 06:43:21] -rw-r--r-- 2 boinc boinc    474796 Apr 26 03:36 input.tar.gz
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc         0 Apr 26 03:36 boinc_lockfile
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc      2635 Apr 26 03:36 pandaJob.out
[2024-04-26 06:43:21] -rw------- 1 boinc boinc       424 Apr 26 03:36 setup.sh.local
[2024-04-26 06:43:21] -rw------- 1 boinc boinc    993582 Apr 26 03:37 agis_schedconf.cvmfs.json
[2024-04-26 06:43:21] -rw------- 1 boinc boinc   1315307 Apr 26 03:37 cric_ddmendpoints.json
[2024-04-26 06:43:21] drwx------ 4 boinc boinc      4096 Apr 26 03:37 pilot3
[2024-04-26 06:43:21] -rw------- 1 boinc boinc 183587372 Apr 26 06:42 HITS.38204327._001282.pool.root.1
[2024-04-26 06:43:21] -rw------- 1 boinc boinc        95 Apr 26 06:42 pilot_heartbeat.json
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc       532 Apr 26 06:42 boinc_task_state.xml
[2024-04-26 06:43:21] -rw------- 1 boinc boinc      1044 Apr 26 06:42 memory_monitor_summary.json
[2024-04-26 06:43:21] -rw------- 1 boinc boinc         0 Apr 26 06:42 agis_ddmendpoints.agis.ALL.json
[2024-04-26 06:43:21] -rw------- 1 boinc boinc    310526 Apr 26 06:42 log.38204327._001282.job.log.tgz.1
[2024-04-26 06:43:21] -rw------- 1 boinc boinc      7730 Apr 26 06:43 heartbeat.json
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc        28 Apr 26 06:43 wrapper_checkpoint.txt
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc      8192 Apr 26 06:43 boinc_mmap_file
[2024-04-26 06:43:21] -rw------- 1 boinc boinc      4344 Apr 26 06:43 pilotlog.txt
[2024-04-26 06:43:21] -rw------- 1 boinc boinc   1050750 Apr 26 06:43 log.38204327._001282.job.log.1
[2024-04-26 06:43:21] -rw------- 1 boinc boinc       357 Apr 26 06:43 output.list
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc       620 Apr 26 06:43 runtime_log
[2024-04-26 06:43:21] -rw------- 1 boinc boinc   1382400 Apr 26 06:43 result.tar.gz
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc     11410 Apr 26 06:43 runtime_log.err
[2024-04-26 06:43:21] -rw------- 1 boinc boinc       658 Apr 26 06:43 nTCLDmeIWI5n7Olcko1bjSoqABFKDmABFKDm2mFKDmHTGKDmaevjpm.diag
[2024-04-26 06:43:21] -rw-r--r-- 1 boinc boinc     20930 Apr 26 06:43 stderr.txt
[2024-04-26 06:43:21] HITS file was successfully produced:
[2024-04-26 06:43:21] -rw------- 1 boinc boinc 183587372 Apr 26 06:42 shared/HITS.pool.root.1
[2024-04-26 06:43:21]  *** Contents of shared directory: ***
[2024-04-26 06:43:21] total 688428
[2024-04-26 06:43:21] -rw-r--r-- 2 boinc boinc 519467074 Apr 26 03:36 ATLAS.root_0
[2024-04-26 06:43:21] -rw-r--r-- 2 boinc boinc     17537 Apr 26 03:36 start_atlas.sh
[2024-04-26 06:43:21] -rw-r--r-- 2 boinc boinc    474796 Apr 26 03:36 input.tar.gz
[2024-04-26 06:43:21] -rw------- 1 boinc boinc 183587372 Apr 26 06:42 HITS.pool.root.1
[2024-04-26 06:43:21] -rw------- 1 boinc boinc   1382400 Apr 26 06:43 result.tar.gz
06:43:22 (2363504): run_atlas exited; CPU time 41158.211651
06:43:22 (2363504): called boinc_finish(0)

</stderr_txt>
]]>

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